# Setup

## Platform

|setting  |value                        |
|:--------|:----------------------------|
|version  |R version 3.2.0 (2015-04-16) |
|system   |x86_64, darwin13.4.0         |
|ui       |RStudio (0.99.584)           |
|language |(EN)                         |
|collate  |en_US.UTF-8                  |
|tz       |America/Chicago              |

## Packages

|package    |*  |version |date       |source         |
|:----------|:--|:-------|:----------|:--------------|
|abind      |   |1.4-3   |2015-03-13 |CRAN (R 3.2.0) |
|doParallel |   |1.0.8   |2014-02-28 |CRAN (R 3.2.0) |
|foreach    |   |1.4.2   |2014-04-11 |CRAN (R 3.2.0) |
|iterators  |   |1.0.7   |2014-04-11 |CRAN (R 3.2.0) |
|itertools  |   |0.1-3   |2014-03-12 |CRAN (R 3.2.0) |
|Rcpp       |   |0.11.6  |2015-05-01 |CRAN (R 3.2.0) |
|testthat   |*  |0.10.0  |2015-05-22 |CRAN (R 3.2.0) |

# Check results
311 checked out of 312 dependencies 

## abctools (1.0.2)
Maintainer: Matt Nunes <m.nunes@lancaster.ac.uk>  
Bug reports: http://github.com/dennisprangle/abctools/issues

```
checking whether package ‘abctools’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/abctools.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## abd (0.2-7)
Maintainer: Kevin M. Middleton <middletonk@missouri.edu>

__OK__

## acs (1.2)
Maintainer: Ezra Haber Glenn <eglenn@mit.edu>

```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  confint.acs dim.acs length.acs prompt.acs
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
checking R code for possible problems ... NOTE
geo.lookup: no visible binding for global variable ‘fips.state’
geo.lookup: no visible binding for global variable
  ‘fips.county.subdivision’
geo.lookup: no visible binding for global variable ‘fips.school’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.american.indian.area’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.state’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.county’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.county.subdivision’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.place’
geo.make : .geo.unit.make: no visible binding for global variable
  ‘fips.school’
```
```
DONE
Status: 2 NOTEs
```

## afex (0.13-145)
Maintainer: Henrik Singmann <singmann+afex@gmail.com>

__OK__

## aLFQ (1.3.2)
Maintainer: George Rosenberger <rosenberger@imsb.biol.ethz.ch>

```
checking whether package ‘aLFQ’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/aLFQ.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## alm (0.4.0)
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>  
Bug reports: http://www.github.com/ropensci/alm/issues

__OK__

## AntWeb (0.7)
Maintainer: 'Karthik Ram' <karthik.ram@gmail.com>  
Bug reports: https://github.com/ropensci/AntWeb/issues

__OK__

## AppliedPredictiveModeling (1.1-6)
Maintainer: Max Kuhn <mxkuhn@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘ellipse’ ‘lattice’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
checking R code for possible problems ... NOTE
bookTheme: no visible global function definition for ‘trellis.par.set’
transparentTheme: no visible global function definition for
  ‘trellis.par.set’
upperp: no visible global function definition for ‘ellipse’
upperp: no visible global function definition for ‘panel.xyplot’
upperp: no visible global function definition for ‘trellis.par.get’
```
```
DONE
Status: 3 NOTEs
```

## APSIM (0.8.0)
Maintainer: Justin Fainges <Justin.Fainges@csiro.au>

__OK__

## aqp (1.8-6)
Maintainer: Dylan Beaudette <debeaudette@ucdavis.edu>

__OK__

## ARPobservation (1.1)
Maintainer: James E. Pustejovsky <jepusto@gmail.com>

__OK__

## ARTool (0.9.5)
Maintainer: Matthew Kay <mjskay@uw.edu>  
Bug reports: https://github.com/mjskay/ARTool/issues/new

__OK__

## asVPC (1.0.2)
Maintainer: Eun-Kyung Lee <lee.eunk@gmail.com>

__OK__

## bams (1.6)
Maintainer: Toby Dylan Hocking <toby@sg.cs.titech.ac.jp>

```
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘GLAD’ ‘DNAcopy’ ‘gada’
```
```
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘DNAcopy’ ‘GLAD’ ‘cghseg’ ‘changepoint’ ‘gada’ ‘grid’ ‘proto’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
Missing or unexported object: ‘ggplot2::coord_transform’
Unexported objects imported by ':::' calls:
  ‘cghseg:::segmeanCO’ ‘ggplot2:::GeomRect’
  See the note in ?`:::` about the use of this operator.
```
```
checking R code for possible problems ... NOTE
dnacopy.smoothvec : <anonymous>: no visible global function definition
  for ‘smooth.CNA’
dnacopy.smoothvec : <anonymous>: no visible global function definition
  for ‘segment’
dnacopy.smoothvec : <anonymous>: no visible binding for global variable
  ‘segment’
gada.results : <anonymous> : <anonymous>: no visible global function
  definition for ‘WextIextToSegments’
geom_tallrect: no visible global function definition for ‘proto’
geom_tallrect : draw_groups: no visible global function definition for
  ‘unit’
run.pelt: no visible binding for global variable ‘cpt.mean’
runglad: no visible global function definition for ‘as.profileCGH’
runglad : <anonymous>: no visible binding for global variable ‘daglad’
runglad : <anonymous> : <anonymous>: no visible binding for global
  variable ‘glad’
```
```
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
  inst/article/Makefile
Some ‘make’ programs ignore lines not ending in LF.
```
```
DONE
Status: 4 NOTEs
```

## BatchExperiments (1.4.1)
Maintainer: Michel Lang <michellang@gmail.com>  
Bug reports: https://github.com/tudo-r/BatchExperiments/issues

```
checking dependencies in R code ... NOTE
Unexported objects imported by ':::' calls:
  ‘BatchJobs:::addIntModulo’ ‘BatchJobs:::buffer’
  ‘BatchJobs:::checkDir’ ‘BatchJobs:::checkId’ ‘BatchJobs:::checkIds’
  ‘BatchJobs:::checkPart’ ‘BatchJobs:::createShardedDirs’
  ‘BatchJobs:::dbConnectToJobsDB’ ‘BatchJobs:::dbCreateJobStatusTable’
  ‘BatchJobs:::dbDoQuery’ ‘BatchJobs:::dbFindDone’
  ‘BatchJobs:::dbFindRunning’ ‘BatchJobs:::dbRemoveJobs’
  ‘BatchJobs:::dbSelectWithIds’ ‘BatchJobs:::getJobDirs’
  ‘BatchJobs:::getJobInfoInternal’ ‘BatchJobs:::getKillJob’
  ‘BatchJobs:::getListJobs’ ‘BatchJobs:::getRandomSeed’
  ‘BatchJobs:::getResult’ ‘BatchJobs:::isRegistryDir’
  ‘BatchJobs:::makeRegistryInternal’ ‘BatchJobs:::saveRegistry’
  ‘BatchJobs:::seeder’ ‘BatchJobs:::syncRegistry’
  See the note in ?`:::` about the use of this operator.
```
```
DONE
Status: 1 NOTE
```

## bayesGDS (0.6.1)
Maintainer: Michael Braun <braunm@smu.edu>

__OK__

## bayesPop (5.3-4)
Maintainer: Hana Sevcikova <hanas@uw.edu>

__OK__

## bcpa (1.1)
Maintainer: Eliezer Gurarie <eliezg@uw.edu>

__OK__

## bdvis (0.1.0)
Maintainer: Vijay Barve <vijay.barve@gmail.com>

__OK__

## bear (2.6.4)
Maintainer: Yung-jin Lee <mobilepk@gmail.com>

```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘plyr’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
DONE
Status: 1 NOTE
```

## benchmark (0.3-6)
Maintainer: Manuel J. A. Eugster <manuel@mjae.net>

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘Rgraphviz’
```
```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘multcomp’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
checking R code for possible problems ... NOTE
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘algorithms’
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘value’
boxplot.AlgorithmPerformance: no visible binding for global variable
  ‘samples’
bsgraph0.dist: no visible global function definition for ‘addEdge’
bsgraph0.graphNEL: no visible global function definition for
  ‘getDefaultAttrs’
bsgraph0.graphNEL: no visible global function definition for ‘agopen’
densityplot.AlgorithmPerformance: no visible binding for global
  variable ‘value’
densityplot.AlgorithmPerformance: no visible binding for global
  variable ‘algorithms’
mi: no visible global function definition for ‘mi.plugin’
patch.relation_class_ids: no visible global function definition for
  ‘relation_is_strict_weak_order’
plot.DatasetCharacterization: no visible binding for global variable
  ‘characteristics’
plot.DatasetCharacterization: no visible binding for global variable
  ‘value’
plot.DatasetCharacterization: no visible binding for global variable
  ‘samples’
plot.TestResult: no visible binding for global variable ‘samples’
plot.TestResult: no visible binding for global variable ‘value’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘algorithms’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘value’
stripchart.AlgorithmPerformance: no visible binding for global variable
  ‘samples’
```
```
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘graph’
```
```
DONE
Status: 4 NOTEs
```

## BEQI2 (2.0-0)
Maintainer: Dennis Walvoort <dennis.Walvoort@wur.nl>

__OK__

## bigml (0.1.2)
Maintainer: Leon Hwang <hwang@bigml.com>  
Bug reports: https://github.com/bigmlcom/bigml-r/issues

__OK__

## Biograph (2.0.4)
Maintainer: Frans Willekens <willekens@demogr.mpg.de>

__OK__

## biom (0.3.12)
Maintainer: Paul J. McMurdie <mcmurdie@stanford.edu>  
Bug reports: https://github.com/joey711/biom/issues

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## bmk (1.0)
Maintainer: Matthew Krachey <matthewkrachey@yahoo.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking dependencies in R code ... NOTE
'library' or 'require' calls to packages already attached by Depends:
  ‘coda’ ‘functional’ ‘plyr’
  Please remove these calls from your code.
Packages in Depends field not imported from:
  ‘coda’ ‘functional’ ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
bmkconverge: no visible global function definition for ‘Compose’
bmksensitive: no visible global function definition for ‘Compose’
bmksummary: no visible global function definition for ‘Compose’
bmksummary: no visible global function definition for ‘Curry’
bmksummary: no visible global function definition for ‘mcmc’
bmksummary: no visible global function definition for ‘mcmc.list’
bmksummary: no visible global function definition for ‘effectiveSize’
bmksummary: no visible global function definition for ‘gelman.diag’
```
```
DONE
Status: 3 NOTEs
```

## bold (0.2.6)
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>  
Bug reports: https://github.com/ropensci/bold/issues

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘sangerseqR’
```
```
DONE
Status: 1 NOTE
```

## boottol (2.0)
Maintainer: Garrett Schiltgen <garrett.schiltgen@gmail.com>

__OK__

## broom (0.3.7)
Maintainer: David Robinson <admiral.david@gmail.com>  
Bug reports: http://github.com/dgrtwo/broom/issues

__OK__

## BSGS (1.0)
Maintainer: Kuo-Jung Lee <kuojunglee@mail.ncku.edu.tw>

__OK__

## BTSPAS (2014.0901)
Maintainer: Carl J Schwarz <cschwarz@stat.sfu.ca>

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
```
```
checking whether package ‘BTSPAS’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/BTSPAS.Rcheck/00install.out’ for details.
Status: 1 ERROR, 1 NOTE
```

## caret (6.0-47)
Maintainer: Max Kuhn <Max.Kuhn@pfizer.com>

__OK__

## caretEnsemble (1.0.0)
Maintainer: Zachary A. Mayer <zach.mayer@gmail.com>  
Bug reports: https://github.com/zachmayer/caretEnsemble/issues

```
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  3 - 2 == 1
  
  testthat results ================================================================
  OK: 348 SKIPPED: 0 FAILED: 6
  1. Error: Warnings issued for missing data correctly 
  2. Error: NA preservation and standard errors work right 
  3. Error: We can ensemble models and handle missingness across predictors 
  4. Failure (at test-optimizers.R#122): Warnings and fallbacks in degenerate cases 
  5. Failure (at test-optimizers.R#129): Warnings and fallbacks in degenerate cases 
  6. Failure (at test-optimizers.R#130): Warnings and fallbacks in degenerate cases 
  
  Error: testthat unit tests failed
  Execution halted
```
```
DONE
Status: 1 ERROR
```

## cda (1.5.1)
Maintainer: Baptiste Auguie <baptiste.auguie@gmail.com>

```
checking whether package ‘cda’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/cda.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## CDM (4.3-0)
Maintainer: Alexander Robitzsch <a.robitzsch@bifie.at>

```
checking whether package ‘CDM’ can be installed ... [26s/26s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/CDM.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## chemosensors (0.7.8)
Maintainer: Andrey Ziyatdinov <andrey.ziyatdinov@upc.edu>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘doMC’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
DONE
Status: 2 NOTEs
```

## ChemoSpec (4.0.1)
Maintainer: Bryan A. Hanson <hanson@depauw.edu>  
Bug reports: https://github.com/bryanhanson/ChemoSpec/issues

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘speaq’
```
```
checking examples ... ERROR
Running examples in ‘ChemoSpec-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clupaSpectra
> ### Title: Conduct Hierarchical Cluster-Based Peak Alignment on a Spectra
> ###   Object
> ### Aliases: clupaSpectra
> ### Keywords: utilities
> 
> ### ** Examples
> 
> data(alignMUD)
> plotSpectra(alignMUD, which = 1:20, lab.pos = 4.5, offset = 0.1,
+ 	yrange = c(0, 1900), amp = 500, xlim = c(1.5, 1.8),
+ 	main = "Misaligned NMR Spectra (alignMUD)")
> aMUD <- clupaSpectra(alignMUD)
Error in clupaSpectra(alignMUD) : 
  You need to install package speaq to use this function
Execution halted
```
```
DONE
Status: 1 ERROR, 1 NOTE
```

## classifly (0.4)
Maintainer: Hadley Wickham <h.wickham@gmail.com>

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘rggobi’
```
```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘rggobi’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
DONE
Status: 2 NOTEs
```

## classify (1.3)
Maintainer: Dr Chris Wheadon <chris.wheadon@gmail.com>

```
checking whether package ‘classify’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/classify.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## clhs (0.5-4)
Maintainer: Pierre Roudier <roudierp@landcareresearch.co.nz>

__OK__

## clickstream (1.1.4)
Maintainer: Michael Scholz <michael.scholz@uni-passau.de>

__OK__

## clusterfly (0.4)
Maintainer: Hadley Wickham <h.wickham@gmail.com>

```
checking package dependencies ... ERROR
Package required but not available: ‘rggobi’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR
```

## coefplot (1.2.0)
Maintainer: Jared P. Lander <packages@jaredlander.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Deprecated license: BSD
```
```
DONE
Status: 1 NOTE
```

## confidence (1.1-0)
Maintainer: Dennis J. J. Walvoort <dennis.Walvoort@wur.nl>

__OK__

## cpca (0.1.2)
Maintainer: Andrey Ziyatdinov <andrey.ziyatdinov@upc.edu>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
DONE
Status: 1 NOTE
```

## CPMCGLM (1.1)
Maintainer: Jeremie Riou <jeremie.riou@isped.u-bordeaux2.fr>

__OK__

## cshapes (0.4-2)
Maintainer: Nils B. Weidmann <nils.weidmann@uni-konstanz.de>

```
checking installed package size ... NOTE
  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    shp   5.2Mb
```
```
DONE
Status: 1 NOTE
```

## d3Network (0.5.2.1)
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>  
Bug reports: https://github.com/christophergandrud/d3Network/issues

__OK__

## data.table (1.9.4)
Maintainer: Matt Dowle <mdowle@mdowle.plus.com>  
Bug reports: https://github.com/Rdatatable/data.table/issues

__OK__

## dataRetrieval (2.2.1)
Maintainer: Laura DeCicco <ldecicco@usgs.gov>

```
checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  > library(testthat)
  > library(dataRetrieval)
  > test_check("dataRetrieval")
  1. Failure (at tests_imports.R#107): External importWaterML1 test --------------
  ncol(data) == 10 isn't true
  
  Read 7 items
  testthat results ================================================================
  OK: 37 SKIPPED: 0 FAILED: 1
  1. Failure (at tests_imports.R#107): External importWaterML1 test 
  
  Error: testthat unit tests failed
  Execution halted
```
```
DONE
Status: 1 ERROR
```

## dcmr (1.0)
Maintainer: Diane Losardo <dlosardo@amplify.com>

__OK__

## decctools (0.2.1)
Maintainer: James Keirstead <j.keirstead@imperial.ac.uk>

__OK__

## Deducer (0.7-7)
Maintainer: Ian Fellows <ian@fellstat.com>

```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  as.matrix.cor.matrix plot.cor.matrix print.contin.table
  print.contin.tests print.contingency.tables print.cor.matrix
  print.freq.table print.multi.test sort.data.frame summary.lm
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
DONE
Status: 1 NOTE
```

## demi (1.1.2)
Maintainer: Sten Ilmjarv <sten.ilmjarv@gmail.com>

```
checking package dependencies ... ERROR
Packages required but not available: ‘affxparser’ ‘affy’ ‘oligo’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Status: 1 ERROR
```

## dendextend (0.18.3)
Maintainer: Tal Galili <tal.galili@gmail.com>  
Bug reports: https://github.com/talgalili/dendextend/issues

```
checking package dependencies ... NOTE
Package which this enhances but not available for checking: ‘labeltodendro’
```
```
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘WGCNA’, ‘moduleColor’, ‘distory’
```
```
DONE
Status: 2 NOTEs
```

## DescribeDisplay (0.2.4)
Maintainer: Di Cook <dicook@iastate.edu>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Deprecated license: BSD
```
```
checking top-level files ... NOTE
Non-standard files/directories found at top level:
  ‘ggobi-xml’ ‘load.r’ ‘write-xml.rnw’
```
```
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘proto’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
DONE
Status: 3 NOTEs
```

## discreteRV (1.2.1)
Maintainer: Eric Hare <erichare@iastate.edu>  
Bug reports: https://github.com/erichare/discreteRV/issues

__OK__

## dostats (1.3.2)
Maintainer: Andrew Redd <Andrew.Redd@hsc.utah.edu>

__OK__

## dropR (0.1)
Maintainer: Matthias Bannert <bannert@kof.ethz.ch>

__OK__

## dynsurv (0.2-2)
Maintainer: Jun Yan <jun.yan@uconn.edu>

__OK__

## EBMAforecast (0.42)
Maintainer: Jacob Montgomery <jacob.montgomery@wustl.edu>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘Hmisc’ ‘abind’ ‘ensembleBMA’ ‘methods’ ‘plyr’ ‘separationplot’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
plot,FDatFitLogit: no visible binding for global variable ‘y’
plot,FDatFitNormal: no visible binding for global variable ‘y’
```
```
DONE
Status: 3 NOTEs
```

## ecoengine (1.9.1)
Maintainer: Karthik Ram <karthik.ram@gmail.com>  
Bug reports: https://github.com/ropensci/ecoengine/issues

__OK__

## eeptools (0.3.1)
Maintainer: Jared E. Knowles <jknowles@gmail.com>

```
checking R code for possible problems ... NOTE
moves_calc: no visible binding for global variable ‘id’
```
```
DONE
Status: 1 NOTE
```

## EIAdata (0.0.3)
Maintainer: Matthew Brigida <matt@complete-markets.com>

__OK__

## emdatr (0.3)
Maintainer: Gopi Goteti <my.ration.shop@gmail.com>

__OK__

## emdbook (1.3.8)
Maintainer: Ben Bolker <bolker@mcmaster.ca>

__OK__

## enigma (0.1.1)
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>  
Bug reports: https://github.com/ropengov/enigma/issues

__OK__

## EpiContactTrace (0.8.8)
Maintainer: Stefan Widgren <stefan.widgren@sva.se>

```
checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
  ‘animation’ ‘ggmap’
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
checking R code for possible problems ... NOTE
Animate : create_map: no visible global function definition for ‘ggmap’
Animate : create_map: no visible global function definition for
  ‘geom_segment’
Animate : create_map: no visible global function definition for
  ‘aes_string’
Animate : create_map: no visible global function definition for ‘labs’
Animate : create_map: no visible global function definition for
  ‘ggtitle’
Animate : create_map: no visible global function definition for
  ‘ani.pause’
Animate: no visible global function definition for ‘saveHTML’
```
```
DONE
Status: 2 NOTEs
```

## eurostat (1.0.16)
Maintainer: Lahti Leo <louhos@googlegroups.com>  
Bug reports: https://github.com/ropengov/eurostat/issues

__OK__

## evolqg (0.1-5)
Maintainer: Diogo Melo <diogro@usp.br>  
Bug reports: https://github.com/lem-usp/evolqg/issues

__OK__

## extracat (1.7-1)
Maintainer: Alexander Pilhoefer <alexander.pilhoefer@math.uni-augsburg.de>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
DONE
Status: 1 NOTE
```

## ez (4.2-2)
Maintainer: Michael A. Lawrence <mike.lwrnc@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## ezsim (0.5.5)
Maintainer: TszKin Julian Chan <ctszkin@gmail.com>  
Bug reports: TszKin Julian Chan <ctszkin@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
DONE
Status: 1 NOTE
```

## FAOSTAT (2.0)
Maintainer: Filippo Gheri <filippo.gheri@fao.org>

```
checking data for non-ASCII characters ... NOTE
  Note: found 179 marked UTF-8 strings
```
```
DONE
Status: 1 NOTE
```

## fishmove (0.3-3)
Maintainer: Johannes Radinger <jradinger@igb-berlin.de>

__OK__

## freqweights (1.0.1)
Maintainer: Emilio Torres-Manzanera <torres@uniovi.es>

__OK__

## fSRM (0.6.1)
Maintainer: Felix Schönbrodt <felix@nicebread.de>

__OK__

## gcbd (0.2.5)
Maintainer: Dirk Eddelbuettel <edd@debian.org>

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘gputools’
```
```
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘RSQLite’ ‘lattice’ ‘plyr’ ‘reshape’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
createDatabase: no visible global function definition for ‘dbDriver’
createDatabase: no visible global function definition for
  ‘dbBuildTableDefinition’
createDatabase: no visible global function definition for ‘dbConnect’
createDatabase: no visible global function definition for ‘dbGetQuery’
createDatabase: no visible global function definition for
  ‘dbDisconnect’
databaseResult: no visible global function definition for ‘dbConnect’
databaseResult: no visible global function definition for ‘dbDriver’
databaseResult: no visible global function definition for
  ‘dbWriteTable’
databaseResult: no visible global function definition for
  ‘dbDisconnect’
figure_Lattice: no visible global function definition for ‘melt’
figure_Lattice: no visible global function definition for
  ‘trellis.par.get’
figure_Lattice: no visible global function definition for
  ‘trellis.par.set’
figure_LatticeByArch: no visible global function definition for ‘melt’
figure_LatticeByArch: no visible global function definition for
  ‘trellis.par.get’
figure_LatticeByArch: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogIntercept: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogIntercept: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogLattice: no visible global function definition for ‘melt’
figure_LogLogLattice: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogLattice: no visible global function definition for
  ‘trellis.par.set’
figure_LogLogSlopes: no visible global function definition for
  ‘trellis.par.get’
figure_LogLogSlopes: no visible global function definition for
  ‘trellis.par.set’
getBenchmarkData: no visible global function definition for ‘dbConnect’
getBenchmarkData: no visible global function definition for ‘dbDriver’
getBenchmarkData: no visible global function definition for
  ‘dbGetQuery’
getBenchmarkData: no visible global function definition for
  ‘dbDisconnect’
loglogAnalysis: no visible global function definition for ‘dbConnect’
loglogAnalysis: no visible global function definition for ‘dbDriver’
loglogAnalysis: no visible global function definition for ‘dbGetQuery’
loglogAnalysis: no visible global function definition for
  ‘dbDisconnect’
loglogAnalysis: no visible global function definition for ‘ddply’
loglogAnalysis: no visible global function definition for ‘melt’
luBenchmark: no visible global function definition for ‘lu’
matmultBenchmarkgputools: no visible global function definition for
  ‘gpuMatMult’
qrBenchmarkgputools: no visible global function definition for ‘gpuQr’
svdBenchmarkgputools: no visible global function definition for
  ‘gpuSvd’
```
```
checking re-building of vignette outputs ... NOTE
Error in re-building vignettes:
  ...
Loading required package: RSQLite
Loading required package: DBI
Loading required package: plyr
Loading required package: reshape

Attaching package: ‘reshape’

The following objects are masked from ‘package:plyr’:

    rename, round_any

Loading required package: lattice
Warning in packageDescription("gputools") :
  no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
Execution halted

```
```
DONE
Status: 4 NOTEs
```

## gcookbook (1.0)
Maintainer: Winston Chang <winston@stdout.org>

__OK__

## GDELTtools (1.2)
Maintainer: Stephen R. Haptonstahl <srh@haptonstahl.org>

```
checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘tools’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
IsValidGDELT: no visible global function definition for ‘md5sum’
```
```
DONE
Status: 2 NOTEs
```

## gdm (1.0)
Maintainer: Matthew C. Fitzpatrick <mfitzpatrick@al.umces.edu>

__OK__

## gems (1.0.0)
Maintainer: Luisa Salazar Vizcaya <luisa.salazar@ispm.unibe.ch>

__OK__

## gemtc (0.6-2)
Maintainer: Gert van Valkenhoef <g.h.m.van.valkenhoef@rug.nl>

```
checking package dependencies ... NOTE
Package suggested but not available for checking: ‘BRugs’
```
```
checking examples ... ERROR
Running examples in ‘gemtc-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mtc.hy.prior
> ### Title: Set priors for the heterogeneity parameter
> ### Aliases: mtc.hy.prior mtc.hy.empirical.lor
> 
> ### ** Examples
> 
> file <- system.file("extdata/luades-smoking.gemtc", package="gemtc")
> network <- read.mtc.network(file)
> 
> # NOTE: the mtc.run commands below are for illustrative purposes, such a small
> # number of iterations should obviously not be used in practice.
> 
> # set a uniform prior standard deviation
> model1 <- mtc.model(network, hy.prior=mtc.hy.prior("std.dev", "dunif", 0, 2))
> result <- mtc.run(model1, n.adapt=10, n.iter=10)
Warning: running command 'which wine' had status 1

WARNING: The locate database (/var/db/locate.database) does not exist.
To create the database, run the following command:

  sudo launchctl load -w /System/Library/LaunchDaemons/com.apple.locate.plist

Please be aware that the database can take some time to generate; once
the database has been created, this message will no longer appear.

Warning: running command 'locate wine | grep bin/wine$' had status 1
Error in findUnixBinary(x = "wine") : couldn't find wine binary file
Calls: mtc.run ... mtc.sample -> as.mcmc.list -> <Anonymous> -> findUnixBinary
Execution halted
```
```
DONE
Status: 1 ERROR, 1 NOTE
```

## geospt (1.0-1)
Maintainer: Alí Santacruz <amsantac@unal.edu.co>

__OK__

## gfcanalysis (1.2)
Maintainer: Alex Zvoleff <azvoleff@conservation.org>  
Bug reports: https://github.com/azvoleff/gfcanalysis/issues

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
DONE
Status: 1 NOTE
```

## GGally (0.5.0)
Maintainer: Barret Schloerke <schloerke@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## ggenealogy (0.1.0)
Maintainer: Lindsay Rutter <lrutter@iastate.edu>

__OK__

## ggmap (2.4)
Maintainer: David Kahle <david.kahle@gmail.com>  
Bug reports: https://github.com/dkahle/ggmap/issues

```
checking examples ... ERROR
Running examples in ‘ggmap-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: geocode
> ### Title: Geocode
> ### Aliases: geocode geocodeQueryCheck
> 
> ### ** Examples
> 
> # Types of input
> geocode('Baylor University')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=Baylor+University&sensor=false
        lon      lat
1 -97.11844 31.54822
> geocode('1600 Pennsylvania Avenue, Washington DC')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=1600+Pennsylvania+Avenue,+Washington+DC&sensor=false
        lon      lat
1 -76.98168 38.87866
> geocode('the white house')
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=the+white+house&sensor=false
        lon      lat
1 -77.03653 38.89768
> geocode(c('baylor university', 'salvation army waco'))
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=baylor+university&sensor=false
Information from URL : http://maps.googleapis.com/maps/api/geocode/json?address=salvation+army+waco&sensor=false
        lon      lat
1 -97.11844 31.54822
2 -97.12858 31.54158
> 
> # Types of output
> geocode('Baylor University', output = "latlona")
        lon      lat
1 -97.11844 31.54822
                                                        address
1 baylor university, 1311 south 5th street, waco, tx 76706, usa
> geocode('Baylor University', output = "more")
Error in data.frame(long_name = "Baylor University", short_name = "Baylor University",  : 
  arguments imply differing number of rows: 1, 0
Calls: geocode ... as.data.frame -> as.data.frame.list -> eval -> eval -> data.frame
Execution halted
```
```
DONE
Status: 1 ERROR
```

## ggparallel (0.1.1)
Maintainer: Heike Hofmann <hofmann@iastate.edu>

```
checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
  MIT
```
```
checking top-level files ... NOTE
Non-standard file/directory found at top level:
  ‘ggparallel.Rproj’
```
```
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘ggplot2’ ‘plyr’ ‘reshape2’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
ggparallel : getRibbons: no visible global function definition for
  ‘melt’
ggparallel : getRibbons: no visible global function definition for
  ‘geom_ribbon’
ggparallel : getRibbons: no visible global function definition for
  ‘aes’
ggparallel : getRibbons: no visible binding for global variable ‘id’
ggparallel : getRibbons: no visible global function definition for
  ‘ddply’
ggparallel : getRibbons: no visible global function definition for ‘.’
ggparallel : getRibbons: no visible global function definition for
  ‘geom_line’
ggparallel : getRibbons: no visible global function definition for
  ‘scale_size’
ggparallel : getRibbons: no visible binding for global variable
  ‘summarise’
ggparallel: no visible global function definition for ‘melt’
ggparallel: no visible global function definition for ‘ddply’
ggparallel: no visible global function definition for ‘.’
ggparallel: no visible binding for global variable ‘summarize’
ggparallel: no visible global function definition for ‘geom_text’
ggparallel: no visible global function definition for ‘aes’
ggparallel: no visible global function definition for ‘theme’
ggparallel: no visible global function definition for ‘ggplot’
ggparallel: no visible global function definition for ‘geom_bar’
ggparallel: no visible global function definition for ‘xlab’
ggparallel: no visible global function definition for
  ‘scale_x_discrete’
```
```
checking Rd line widths ... NOTE
Rd file 'genes.Rd':
  \examples lines wider than 100 characters:
     ggparallel(list("path", "chrom"), text.offset=c(0.03, 0,-0.03), data = genes,  width=0.1, order=c(1,0), angle=0, color="white",
        scale_colour_manual(values = c(   brewer.pal("YlOrRd", n = 9), rep("grey80", 24)), guide="none") +

Rd file 'ggparallel.Rd':
  \examples lines wider than 100 characters:
     ggparallel(names(titanic)[c(1,4,2,3)], titanic, weight=1, asp=0.5, method="hammock", ratio=0.2, order=c(0,0)) +
     ggparallel(names(titanic)[c(1,4,2,3)], titanic, weight="Freq", asp=0.5, method="hammock", order=c(0,0)) +
     ggparallel(list("path", "chrom"), text.offset=c(0.03, 0,-0.03), data = genes,  width=0.1, order=c(1,0), text.angle=0, color="white",
        scale_colour_manual(values = c(   brewer.pal("YlOrRd", n = 9), rep("grey80", 24)), guide="none") +

These lines will be truncated in the PDF manual.
```
```
DONE
Status: 5 NOTEs
```

## ggplot2 (1.0.1)
Maintainer: Hadley Wickham <h.wickham@gmail.com>  
Bug reports: https://github.com/hadley/ggplot2/issues

__OK__

## ggsubplot (0.3.2)
Maintainer: Garrett Grolemund <garrett@rstudio.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## ggswissmaps (0.0.2)
Maintainer: Sandro Petrillo Burri <gibo.gaf@gmail.com>

__OK__

## ggtern (1.0.5.0)
Maintainer: Nicholas Hamilton <nick@ggtern.com>

__OK__

## ggthemes (2.1.2)
Maintainer: Jeffrey B. Arnold <jeffrey.arnold@gmail.com>  
Bug reports: http://github.com/jrnold/ggthemes

__OK__

## gpmap (0.1.1)
Maintainer: Arne B. Gjuvsland <arne.gjuvsland@nmbu.no>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘foreach’ ‘ggplot2’ ‘isotone’ ‘plyr’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
```
```
checking R code for possible problems ... NOTE
decompose_monotone: no visible global function definition for ‘%dopar%’
decompose_monotone: no visible global function definition for ‘foreach’
decompose_monotone: no visible global function definition for ‘%do%’
decompose_monotone_single: no visible global function definition for
  ‘%dopar%’
decompose_monotone_single: no visible global function definition for
  ‘foreach’
decompose_monotone_single: no visible global function definition for
  ‘laply’
degree_of_monotonicity: no visible global function definition for
  ‘%do%’
degree_of_monotonicity: no visible global function definition for
  ‘foreach’
degree_of_monotonicity_single: no visible global function definition
  for ‘aaply’
monotone_regression: no visible global function definition for
  ‘activeSet’
partial_genotype_order: no visible global function definition for
  ‘aaply’
plot1_dec: no visible global function definition for ‘%do%’
plot1_dec: no visible global function definition for ‘foreach’
plot1_dec: no visible global function definition for ‘ggplot’
plot1_dec: no visible global function definition for ‘aes_string’
plot1_dec: no visible global function definition for ‘geom_point’
plot1_dec: no visible global function definition for ‘facet_wrap’
plot1_dec: no visible global function definition for ‘labs’
plot1_orig: no visible global function definition for ‘%do%’
plot1_orig: no visible global function definition for ‘foreach’
plot1_orig: no visible global function definition for ‘ggplot’
plot1_orig: no visible global function definition for ‘aes_string’
plot1_orig: no visible global function definition for ‘geom_line’
plot1_orig: no visible global function definition for ‘labs’
plot2_dec: no visible global function definition for ‘%do%’
plot2_dec: no visible global function definition for ‘foreach’
plot2_dec: no visible global function definition for ‘ggplot’
plot2_dec: no visible global function definition for ‘aes_string’
plot2_dec: no visible global function definition for ‘geom_line’
plot2_dec: no visible global function definition for ‘facet_wrap’
plot2_dec: no visible global function definition for ‘labs’
plot2_orig: no visible global function definition for ‘%do%’
plot2_orig: no visible global function definition for ‘foreach’
plot2_orig: no visible global function definition for ‘ggplot’
plot2_orig: no visible global function definition for ‘aes_string’
plot2_orig: no visible global function definition for ‘geom_line’
plot2_orig: no visible global function definition for ‘labs’
plot3_dec: no visible global function definition for ‘%do%’
plot3_dec: no visible global function definition for ‘foreach’
plot3_dec: no visible global function definition for ‘ggplot’
plot3_dec: no visible global function definition for ‘aes_string’
plot3_dec: no visible global function definition for ‘geom_line’
plot3_dec: no visible global function definition for ‘facet_grid’
plot3_dec: no visible global function definition for ‘labs’
plot3_orig: no visible global function definition for ‘%do%’
plot3_orig: no visible global function definition for ‘foreach’
plot3_orig: no visible global function definition for ‘ggplot’
plot3_orig: no visible global function definition for ‘aes_string’
plot3_orig: no visible global function definition for ‘geom_line’
plot3_orig: no visible global function definition for ‘facet_wrap’
plot3_orig: no visible global function definition for ‘labs’
```
```
DONE
Status: 3 NOTEs
```

## gProfileR (0.5.3)
Maintainer: Tambet Arak <tambet.arak@gmail.com>

__OK__

## granovaGG (1.3)
Maintainer: Brian A. Danielak <brian@briandk.com>

__OK__

## gsDesign (2.9-3)
Maintainer: Keaven Anderson <keaven_anderson@merck.com>

```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.binomialSPRT plot.gsBinomialExact plot.gsDesign
  plot.gsProbability plot.ssrCP print.eEvents print.gsBoundSummary
  print.gsDesign print.gsProbability print.gsSurv print.nSurv
  print.nSurvival summary.gsDesign summary.spendfn xtable.gsSurv
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
checking line endings in Makefiles ... NOTE
Found the following Makefile(s) without a final LF:
  inst/unitTests/Makefile
Some ‘make’ programs ignore lines not ending in LF.
```
```
DONE
Status: 2 NOTEs
```

## GSIF (0.4-6)
Maintainer: Tomislav Hengl <tom.hengl@isric.org>

__OK__

## gtable (0.1.2)
Maintainer: Hadley Wickham <h.wickham@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## h2o (2.8.4.4)
Maintainer: Tom Kraljevic <tomk@0xdata.com>

```
checking installed package size ... NOTE
  installed size is 40.5Mb
  sub-directories of 1Mb or more:
    java  39.6Mb
```
```
DONE
Status: 1 NOTE
```

## harvestr (0.6.0)
Maintainer: Andrew Redd <andrew.redd@hsc.utah.edu>

__OK__

## HighDimOut (1.0.0)
Maintainer: Cheng Fan <raja8885@hotmail.com>

__OK__

## hillmakeR (0.2)
Maintainer: David Gilinson <dgilinson@reefpointgroup.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
DONE
Status: 1 NOTE
```

## HistData (0.7-5)
Maintainer: Michael Friendly <friendly@yorku.ca>

```
checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: ‘Guerry’, ‘alr3’, ‘agridat’
```
```
DONE
Status: 1 NOTE
```

## HiveR (0.2-28)
Maintainer: Bryan A. Hanson <hanson@depauw.edu>  
Bug reports: https://github.com/bryanhanson/HiveR/issues

__OK__

## HLMdiag (0.2.5)
Maintainer: Adam Loy <loyad01@gmail.com>

```
checking whether package ‘HLMdiag’ can be installed ... [29s/29s] ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/HLMdiag.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## hydrostats (0.2.3)
Maintainer: Nick Bond <n.bond@griffith.edu.au>

__OK__

## intsvy (1.6)
Maintainer: Daniel Caro <daniel.caro@education.ox.ac.uk>  
Bug reports: https://github.com/eldafani/intsvy/issues

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  plot.intsvy.mean plot.intsvy.reg plot.intsvy.table
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
DONE
Status: 2 NOTEs
```

## IsingSampler (0.2)
Maintainer: Sacha Epskamp <mail@sachaepskamp.com>

__OK__

## ivlewbel (1.1)
Maintainer: Alan Fernihough <alan.fernihough@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  print.lewbel.model
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
checking R code for possible problems ... NOTE
clusterVCV: no visible global function definition for ‘estfun’
covc: no visible global function definition for ‘sandwich’
ftest: no visible global function definition for ‘vcovHC’
```
```
DONE
Status: 3 NOTEs
```

## JAGUAR (2.0)
Maintainer: Chaitanya Acharya <c.acharya@duke.edu>

__OK__

## jsonlite (0.9.16)
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>  
Bug reports: http://github.com/jeroenooms/jsonlite/issues

__OK__

## Kernelheaping (0.5)
Maintainer: Marcus Gross <marcus.gross@fu-berlin.de>

__OK__

## kimisc (0.2-1)
Maintainer: Kirill Mueller <mail@kirill-mueller.de>  
Bug reports: https://github.com/krlmlr/kimisc/issues

__OK__

## Kmisc (0.5.0)
Maintainer: Kevin Ushey <kevinushey@gmail.com>  
Bug reports: https://github.com/kevinushey/Kmisc/issues

__OK__

## knitrBootstrap (0.9.0)
Maintainer: Jim Hester <james.f.hester@gmail.com>  
Bug reports: https://github.com/jimhester/knitrBootstrap/issues

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
DONE
Status: 1 NOTE
```

## kobe (1.3.2)
Maintainer: Laurence Kell <laurie.kell@iccat.int>

__OK__

## Lahman (3.0-1)
Maintainer: Michael Friendly <friendly@yorku.ca>

```
checking installed package size ... NOTE
  installed size is  7.4Mb
  sub-directories of 1Mb or more:
    data   7.2Mb
```
```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘plyr’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
DONE
Status: 2 NOTEs
```

## LakeMetabolizer (1.3.3)
Maintainer: Luke Winslow <lawinslow@gmail.com>

__OK__

## learningr (0.29)
Maintainer: Richie Cotton <richierocks@gmail.com>

```
checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
```
```
checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘pracma’
```
```
checking data for non-ASCII characters ... NOTE
  Note: found 78 marked UTF-8 strings
```
```
DONE
Status: 3 NOTEs
```

## lfl (1.1)
Maintainer: Michal Burda <michal.burda@osu.cz>

__OK__

## likert (1.2)
Maintainer: Jason Bryer <jason@bryer.org>  
Bug reports: https://github.com/jbryer/likert/issues

```
checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
```
```
checking dependencies in R code ... NOTE
'library' or 'require' call to ‘shiny’ in package code.
  Please use :: or requireNamespace() instead.
  See section 'Suggested packages' in the 'Writing R Extensions' manual.
```
```
checking data for non-ASCII characters ... NOTE
  Note: found 7 marked UTF-8 strings
```
```
DONE
Status: 3 NOTEs
```

## lint (0.3)
Maintainer: Andrew Redd <andrew.redd@hsc.utah.edu>

```
checking R code for possible problems ... NOTE
autotest_style: no visible global function definition for ‘test_that’
test_style: no visible global function definition for
  ‘expect_equivalent’
```
```
DONE
Status: 1 NOTE
```

## lllcrc (1.2)
Maintainer: Zach Kurtz <zkurtz@gmail.com>

__OK__

## lmerTest (2.0-25)
Maintainer: Alexandra Kuznetsova <alku@dtu.dk>

__OK__

## loopr (1.0.1)
Maintainer: Brandon Taylor <Brandon.Taylor221@gmail.com>

__OK__

## lsbclust (1.0.2)
Maintainer: Pieter Schoonees <schoonees@gmail.com>

__OK__

## lsmeans (2.18)
Maintainer: Russ Lenth <russell-lenth@uiowa.edu>

```
checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘glmmADMB’ ‘lme4.0’
```
```
DONE
Status: 1 NOTE
```

## lubridate (1.3.3)
Maintainer: Garrett Grolemund <garrett@rstudio.com>  
Bug reports: https://github.com/hadley/lubridate/issues

```
checking package dependencies ... NOTE
Packages which this enhances but not available for checking: ‘its’ ‘fts’
```
```
checking S3 generic/method consistency ... NOTE
Found the following apparent S3 methods exported but not registered:
  pretty.day pretty.hour pretty.min pretty.month pretty.point
  pretty.sec pretty.unit pretty.year
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
```
```
DONE
Status: 2 NOTEs
```

## marked (1.1.8)
Maintainer: Jeff Laake <Jeff.Laake@noaa.gov>

```
checking whether package ‘marked’ can be installed ... ERROR
Installation failed.
See ‘/private/tmp/RtmptMRFsQ/check_cran118e525d401b7/marked.Rcheck/00install.out’ for details.
Status: 1 ERROR
```

## medicalrisk (1.1)
Maintainer: Patrick McCormick <patrick.mccormick@alum.mit.edu>

__OK__…