/data/23/pulseprogram
#! | 2786 lines | 1299 code | 1487 blank | 0 comment | 0 complexity | 02214bc6f3a9c2b14b9378b85be4ec3b MD5 | raw file
1# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2;**************************************************************** 3; 4; Copyright (c) 2001-2007 5; Bruker BioSpin MRI GmbH 6; D-76275 Ettlingen, Germany 7; 8; All Rights Reserved 9; 10; $Id: DtiEpi.ppg,v 1.8.2.4 2007/07/13 09:05:22 fhen Exp $ 11 12# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/MRI.include" 1 13;**************************************************************** 14; 15; $Source: /pv/CvsTree/pv/gen/src/prg/methManag/PPG/MRI.include,v $ 16; 17; Copyright (c) 2006 18; Bruker BioSpin MRI GmbH 19; D-76275 Ettlingen, Germany 20; 21; All Rights Reserved 22; 23;;**************************************************************** 24;MRI.include 25 26# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/Avance.incl" 1 27;Avance2.incl 28; for 1 29; 30;avance-version (07/01/22) 31; 32;$CLASS=HighRes Incl 33;$COMMENT= 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189;$Id: Avance2.incl,v 1.14.2.6 2008/04/03 08:54:39 mah Exp $ 190# 14 "/opt/PV5.0/exp/stan/nmr/lists/pp/MRI.include" 2 191 192 193define delay aqq 194define delay deparx 195define delay derxadc 196define delay rdepa 197 198"aqq=dw*td" 199"rdepa=de-depa" 200"deparx=depa-derx" 201"derxadc=derx-deadc" 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245# 86 "/opt/PV5.0/exp/stan/nmr/lists/pp/MRI.include" 246 247 248 249 250 251 252# 11 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 253 254preset off 255 256 257;counter of dummy scans (not acquired; DS set to 0) 258define loopcounter lcDs 259"lcDs = l1" 260 261 262 263# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 1 264;**************************************************************** 265; 266; Copyright (c) 2003-2007 267; Bruker BioSpin MRI GmbH 268; D-76275 Ettlingen, Germany 269; 270; $Id: PrepModulesHead.mod,v 1.14.2.1 2007/07/02 13:05:36 mawi Exp $ 271; 272; All Rights Reserved 273; 274; Declaration of pulseprogram parameters and subroutines for 275; preparation modules 276; 277;**************************************************************** 278 279;**** Fat Suppression Module **** 280 281# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/FatSupDef.mod" 1 282;**************************************************************** 283; 284; Copyright (c) 2002-2007 285; Bruker BioSpin MRI GmbH 286; D-76275 Ettlingen, Germany 287; 288; $Id: FatSupDef.mod,v 1.1.2.2 2007/07/02 14:26:25 mawi Exp $ 289; 290; All Rights Reserved 291; 292; FatSupDef.mod : Declaration of Fat Suppression Subroutine 293; 294;**************************************************************** 295 296if(PVM_FatSupOnOff) 297{ 298define list<frequency> modlis6 = {$PVM_FatSupFL} 299define delay FsD0 = {$PVM_FsD0} 300define delay FsD1 = {$PVM_FsD1} 301define delay FsD2 = {$PVM_FsD2} 302 303define pulse FsP0 = {$PVM_FsP0} 304} 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322# 18 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 323 324 325;**** Flow Saturation Module **** 326 327# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/FlowSatDef.mod" 1 328;**************************************************************** 329; 330; Copyright (c) 2005-2007 331; Bruker BioSpin MRI GmbH 332; D-76275 Ettlingen, Germany 333; 334; $Id: FlowSatDef.mod,v 1.1.4.2 2007/07/02 13:26:58 mawi Exp $ 335; 336; All Rights Reserved 337; 338; FlowSatDef.mod: Declaration of subroutines for Flow Saturation 339; call 340; subr FlowSat() 341; subr FlowSatInit() 342; subr FlowSatInc() 343; 344;**************************************************************** 345 346if(PVM_InFlowSatOnOff == 1) 347 { 348define list<frequency> modlis4 = {$PVM_InFlowSatFL} 349define delay SfD0 = {$PVM_SfD0} 350define delay SfD1 = {$PVM_SfD1} 351define delay SfD2 = {$PVM_SfD2} 352 353define pulse SfP0 = {$PVM_SfP0} 354 355define loopcounter SfLp0 = {$PVM_SfLp0} 356 } 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399# 22 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 400 401 402;**** Inversion Pulse Module **** 403# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/InvPulseDef.mod" 1 404;**************************************************************** 405; 406; Copyright (c) 2002-2007 407; Bruker BioSpin MRI GmbH 408; D-76275 Ettlingen, Germany 409; 410; $Id: InvPulseDef.mod,v 1.1.2.2 2007/07/02 14:26:25 mawi Exp $ 411; 412; All Rights Reserved 413; 414; InvPulseDef.mod : Declaration of Inversion Pulse subroutine 415; 416; call 417; subr InvPulse() 418; 419;**************************************************************** 420; 421; PVM_InvRFPulseArr : 422; 423; sp22 TPQQ[14].name : PVM_InvRFPulsePropertyArr[0].Filename 424; 425; PVM_IpP0 : PVM_InvRFPulseArr[0].PulseLength 426; 427; PVM_IpD2 : PVM_InvPulseDelay[0] 428; PVM_IpD3 : PVM_InvPulseSpoilTime[0] 429; PVM_IpD1 : CONFIG_amplifier _enable 430; PVM_IpD0 : PVM_RampTime 431; 432 433if(PVM_InvPulseOnOff == 1) 434{ 435define list<frequency> modlis2= {$PVM_InvPulseOffsetHz} 436define delay IpD0 = {$PVM_IpD0} 437define delay IpD1 = {$PVM_IpD1} 438define delay IpD2 = {$PVM_IpD2} 439define delay IpD3 = {$PVM_IpD3} 440 441define pulse IpP0 = {$PVM_IpP0} 442} 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463# 25 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 464 465 466;**** Magnetisation Transfer Module **** 467 468# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/MagTransDef.mod" 1 469;**************************************************************** 470; $Source: /pv/CvsTree/pv/gen/src/prg/methManag/PPG/MagTransDef.mod,v $ 471; 472; Copyright (c) 2005-2007 473; Bruker BioSpin MRI GmbH 474; D-76275 Ettlingen, Germany 475; 476; All Rights Reserved 477; 478; MagTransDef.mod: Declaration of subroutine for Magnetization 479; transfer 480; call 481; subr MagTrans() 482; 483; $Id: MagTransDef.mod,v 1.1.2.3 2008/06/05 17:10:28 mawi Exp $ 484;**************************************************************** 485;**** Magnetisation Transfer Module **** 486 487 488if(PVM_MagTransOnOff) 489{ 490define list<frequency> modlis3 = {$PVM_MagTransFL} 491define delay MtD0 = {$PVM_MtD0} 492define delay MtD1 = {$PVM_MtD1} 493define delay MtD2 = {$PVM_MtD2} 494define delay MtD3 = {$PVM_MtD3} 495 496define pulse MtP0 = {$PVM_MtP0} 497 498define loopcounter MtLp0 = {$PVM_MtLp0} 499} 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518# 29 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 519 520 521 522;**** Saturation Pulse Module **** 523 524# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/SatPulseDef.mod" 1 525;**************************************************************** 526; 527; Copyright (c) 2002-2003 528; Bruker BioSpin MRI GmbH 529; D-76275 Ettlingen, Germany 530; 531; $Id: SatPulseDef.mod,v 1.1.2.2 2007/07/02 14:26:25 mawi Exp $ 532; 533; All Rights Reserved 534; 535; SatPulseDef.mod : Declaration of Saturation Pulse subroutines 536; call 537; subr SatPulse() 538; 539;**************************************************************** 540; 541; PVM_SatRFPulseArr : 542; 543; sp28 DPQQ[12].name : PVM_SatRFPulsePropertyArr[0].Filename 544; sp29 DPQQ[13].name : PVM_SatRFPulsePropertyArr[1].Filename 545; sp30 DPQQ[14].name : PVM_SatRFPulsePropertyArr[2].Filename 546; sp31 DPQQ[15].name : PVM_SatRFPulsePropertyArr[3].Filename 547; 548; PVM_SpP0 : PVM_SatRFPulseArr[0].PulseLength 549; PVM_SpP1 : PVM_SatRFPulseArr[1].PulseLength 550; PVM_SpP2 : PVM_SatRFPulseArr[2].PulseLength 551; PVM_SpP3 : PVM_SatRFPulseArr[3].PulseLength 552; 553; PVM_SpD2 : PVM_SatPulseDelay1[0] 554; PVM_SpD6 : PVM_SatPulseSpoilTime[0] 555; PVM_SpD10 : PVM_SatPulseDelay2[0] 556; PVM_SpD3 : PVM_SatPulseSpoilTime[1] 557; PVM_SpD7 : PVM_SatPulseDelay1[1] 558; PVM_SpD11 : PVM_SatPulseDelay2[1] 559; PVM_SpD4 : PVM_SatPulseDelay1[2] 560; PVM_SpD8 : PVM_SatPulseSpoilTime[2] 561; PVM_SpD12 : PVM_SatPulseDelay2[2] 562; PVM_SpD5 : PVM_SatPulseDelay1[3] 563; PVM_SpD9 : PVM_SatPulseSpoilTime[3] 564; PVM_SpD13 : PVM_SatPulseDelay2[3] 565; 566 567if(PVM_SatPulseOnOff == 1) 568 { 569define list<frequency> modlis7 = {$PVM_SatPulseOffsetHz} 570 571define delay SpD0 = {$PVM_SpD0} 572define delay SpD1 = {$PVM_SpD1} 573define delay SpD2 = {$PVM_SpD2} 574define delay SpD3 = {$PVM_SpD3} 575define delay SpD4 = {$PVM_SpD4} 576define delay SpD5 = {$PVM_SpD5} 577define delay SpD6 = {$PVM_SpD6} 578define delay SpD7 = {$PVM_SpD7} 579define delay SpD8 = {$PVM_SpD8} 580define delay SpD9 = {$PVM_SpD9} 581define delay SpD10 = {$PVM_SpD10} 582define delay SpD11 = {$PVM_SpD11} 583define delay SpD12 = {$PVM_SpD12} 584define delay SpD13 = {$PVM_SpD13} 585 } 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646# 34 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 647 648 649 650;*** Saturation Slices Module *** 651 652# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/SatSliceDef.mod" 1 653;**************************************************************** 654; 655; Copyright (c) 2002-2007 656; Bruker BioSpin MRI GmbH 657; D-76275 Ettlingen, Germany 658; 659; $Id: SatSliceDef.mod,v 1.2.2.1 2007/07/02 13:01:13 mawi Exp $ 660; 661; All Rights Reserved 662; 663; SatSlices.mod : Declaration of Saturation Slice subroutine 664; call 665; subr SatSlices() 666; 667;**************************************************************** 668; 669; SaturationSlicesPulse : 670; 671; sp25 DPQQ[9].name : PVM_SatSlicesPulse.Filename 672; PVM_SatP0 : PVM_SatSlicesPulse.Length 673; 674; 675; PVM_SatD1 : CONFIG_amplifier_enable 676; PVM_SatD0 : PVM_RampTime 677; PVM_SatD2 : PVM_FovSatSpoilTime 678; PVM_SatLp0 : PVM_FovSatNSlices 679; 680;**** Saturation Slice Module **** 681if(PVM_FovSatOnOff == 1) 682{ 683define list<frequency> modlis5 = {$PVM_FovSatFL} 684define delay SatD0 = {$PVM_SatD0} 685define delay SatD1 = {$PVM_SatD1} 686define delay SatD2 = {$PVM_SatD2} 687 688define pulse SatP0 = {$PVM_SatP0} 689 690define loopcounter SatLp0 = {$PVM_SatLp0} 691} 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716# 39 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 717 718 719 720;**** Black Blood Module **** 721# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/BlBloodDef.mod" 1 722;**************************************************************** 723; 724; Copyright (c) 2007 725; Bruker BioSpin MRI GmbH 726; D-76275 Ettlingen, Germany 727; 728; $Id: BlBloodDef.mod,v 1.1.2.2 2007/07/02 14:26:25 mawi Exp $ 729; 730; All Rights Reserved 731; 732; BlBloodDef.mod : Declaration of Black blood subroutine 733; 734; call 735; subr BlBlood(ph0) : Black blood preparation with RF phaselist 736; ph0 737; 738;**************************************************************** 739 740if(PVM_BlBloodOnOff) 741 { 742define list<frequency> modlis8 = {$PVM_BlBloodFL} 743define delay BlbD0 = {$PVM_BlbD0} 744define delay BlbD1 = {$PVM_BlbD1} 745define delay BlbD2 = {$PVM_BlbD2} 746define delay BlbD3 = {$PVM_BlbD3} 747 748define pulse BlbP0 = {$PVM_BlbP0} 749 } 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774# 43 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 775 776 777 778;**** Trigger Module **** 779define delay TrigD0 = {$PVM_TrigD0} 780;**** Trigger Out Module **** 781define delay TrigOutD0 = {$PVM_TrigOutD0} 782 783;**** OuterVolumeSuppression **** Solvent Suppression Module **** 784 785# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/WsOvsDef.mod" 1 786;**************************************************************** 787; 788; Copyright (c) 2005-2007 789; Bruker BioSpin MRI GmbH 790; D-76275 Ettlingen, Germany 791; 792; $Id: WsOvsDef.mod,v 1.1.2.3 2008/03/19 14:25:28 sako Exp $ 793; 794; All Rights Reserved 795; 796; WsOvsDef.mod: Declaration of water suppression and Outer 797; volume suppression subroutines 798; 799; call 800; subr Ovs(ph0) ; execution of OVS with ph0 phaselist 801; 802; subr WsOvs(ph0,ph1) : execution of OVS with ph0 and WS with ph1 803; phaselist 804;**************************************************************** 805 806;**** OuterVolumeSuppression **** 807 808if(PVM_OvsOnOff == 1) 809{ 810define list<frequency> Ovslist={$PVM_OvsFrequencyList} 811define delay OvsD0 = {$PVM_OvsD0} 812define delay OvsD1 = {$PVM_OvsD1} 813define pulse OvsP0 = {$PVM_OvsP0} 814} 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844;*** WaterSuppression Module with OVS **** 845 846if (PVM_WsMode) 847{ 848 849define list<frequency> Wslist={$PVM_WsOffsetHz} 850define pulse WsP0 = {$PVM_WsP0} 851define pulse WsP1 = {$PVM_WsP1} 852define pulse WsP2 = {$PVM_WsP2} 853define delay WsNp0 854"WsNp0 = WsP0" 855define delay WsNp1 856"WsNp1 = WsP1" 857define delay WsNp2 858"WsNp2 = WsP2" 859define list<delay> ChD1={$PVM_ChppgD1} 860define list<delay> ChD2={$PVM_ChppgD2} 861define list<delay> VpD1={$PVM_VpppgD1} 862define list<delay> VpD2={$PVM_VpppgD2} 863 864} 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041# 53 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 1042 1043 1044;**** Solvent Suppression module and FOV Saturation module ****** 1045 1046# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/WsSatDef.mod" 1 1047;****************************************************************** 1048; 1049; Copyright (c) 2002-2007 1050; Bruker BioSpin MRI GmbH 1051; D-76275 Ettlingen, Germany 1052; 1053; $Id: WsSatDef.mod,v 1.1.2.2 2007/07/02 14:26:26 mawi Exp $ 1054; 1055; All Rights Reserved 1056; 1057; WsSatDef.mod - Declaration of water suppression and FOV saturation 1058; subroutines 1059; call 1060; subr WsSat(ph0) : execution of WS with ph0 phaselist and 1061; FOV saturation (as passed as argument) 1062; 1063;******************************************************************* 1064 1065 1066 1067 1068 1069 1070 1071 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 1093 1094 1095 1096 1097 1098 1099 1100 1101 1102 1103 1104 1105 1106 1107 1108 1109 1110 1111 1112 1113 1114 1115 1116 1117 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 1149 1150 1151 1152 1153 1154 1155 1156 1157 1158 1159 1160 1161 1162 1163 1164 1165 1166 1167 1168 1169 1170 1171 1172 1173 1174 1175 1176 1177 1178 1179 1180 1181 1182 1183 1184 1185 1186 1187 1188 1189 1190 1191 1192 1193 1194 1195 1196 1197 1198 1199 1200 1201 1202 1203 1204 1205 1206 1207 1208 1209 1210 1211 1212 1213 1214 1215 1216 1217 1218 1219 1220 1221 1222 1223 1224 1225 1226 1227 1228 1229 1230 1231 1232 1233 1234 1235 1236 1237 1238 1239 1240 1241 1242 1243# 57 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 1244 1245 1246;*********** selective inversion recovery ********** 1247 1248# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/SelSliceIrDef.mod" 1 1249;**************************************************************** 1250; 1251; Copyright (c) 2007 1252; Bruker BioSpin MRI GmbH 1253; D-76275 Ettlingen, Germany 1254; 1255; $Id: SelSliceIrDef.mod,v 1.1.2.2 2007/07/02 14:26:25 mawi Exp $ 1256; 1257; All Rights Reserved 1258; 1259; SelSliceIrDef.mod : declaration of slice Selective Inversion 1260; Recovery subroutine 1261; call SliceSelIr() 1262; 1263; 1264;**************************************************************** 1265 1266 1267if(PVM_SelIrOnOff) 1268 { 1269define list<frequency> IrFL = {$PVM_SelIrFL} 1270define delay IrD0 = {$PVM_SelIrD0} 1271define delay IrD1 = {$PVM_SelIrD1} 1272define delay IrD2 = {$PVM_SelIrD2} 1273define delay IrD3 = {$PVM_SelIrD3} 1274define delay IrD4 = {$PVM_SelIrD4} 1275 1276define pulse IrP0 = {$PVM_SelIrP0} 1277 1278define loopcounter IrL0 = {$PVM_SelIrL0} 1279 } 1280 1281 1282 1283 1284 1285 1286 1287 1288 1289 1290 1291 1292 1293 1294 1295 1296 1297 1298 1299# 61 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 1300 1301 1302;***********Tagging***************** 1303 1304# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/TagDef.mod" 1 1305;**************************************************************** 1306; 1307; Copyright (c) 2007 1308; Bruker BioSpin MRI GmbH 1309; D-76275 Ettlingen, Germany 1310; 1311; $Id: TagDef.mod,v 1.1.2.4 2008/06/05 17:09:32 mawi Exp $ 1312; 1313; All Rights Reserved 1314; 1315; TagDef.mod : Declaration of tagging subroutine 1316; call 1317; subr Tagging() 1318; 1319;**************************************************************** 1320 1321if(PVM_TaggingOnOff) 1322{ 1323define list<frequency> taggfreq={$PVM_TaggingFL} 1324 1325define delay TaggD0 = {$PVM_TaggingD0} 1326define delay TaggD1 = {$PVM_TaggingD1} 1327define delay TaggD2 = {$PVM_TaggingD2} 1328define delay TaggD3 = {$PVM_TaggingD3} 1329define delay TaggD4 = {$PVM_TaggingD4} 1330define delay TaggD5 = {$PVM_TaggingD5} 1331 1332define pulse TaggP0 = {$PVM_TaggingP0} 1333define loopcounter TaggL0 = {$PVM_TaggingLp0} 1334} 1335 1336 1337 1338 1339 1340 1341 1342 1343 1344 1345 1346 1347 1348 1349 1350 1351 1352 1353 1354 1355 1356 1357 1358 1359 1360 1361 1362 1363 1364 1365 1366 1367 1368 1369 1370 1371 1372 1373 1374 1375 1376 1377 1378 1379 1380 1381 1382 1383 1384 1385 1386 1387 1388 1389 1390 1391 1392 1393# 65 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 1394 1395 1396;*********** Noe ******************* 1397 1398# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/NoeDef.mod" 1 1399;**************************************************************** 1400; 1401; Copyright (c) 2007 1402; Bruker BioSpin MRI GmbH 1403; D-76275 Ettlingen, Germany 1404; 1405; $Id: NoeDef.mod,v 1.1.2.2 2007/07/02 14:26:26 mawi Exp $ 1406; 1407; All Rights Reserved 1408; 1409; NoeDef.mod: Declaration of Nuclear Overhouser Enhancement 1410; subroutine 1411; call 1412; subr Noe() 1413; 1414;**************************************************************** 1415 1416if(PVM_NoeOnOff == On) 1417{ 1418define delay NoeD0 = {$PVM_NoeD0} 1419define delay NoeD1 = {$PVM_NoeD1} 1420} 1421 1422 1423 1424 1425 1426 1427 1428 1429 1430 1431 1432 1433 1434 1435 1436 1437 1438 1439 1440 1441 1442# 69 "/opt/PV5.0/exp/stan/nmr/lists/pp/PrepModulesHead.mod" 2 1443 1444 1445 1446 1447define loopcounter EvolLp0 = {$PVM_EvolLp0} 1448define list<delay> EvolD0 = {$PVM_EvolD0} 1449 1450 1451# 21 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 1452 1453; #include <DwiHead.mod> 1454# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDwiHead.mod" 1 1455;************************************************************************* 1456; Copyright (c) 2002 - 2007 1457; Bruker BioSpin MRI GmbH 1458; D-76275 Ettlingen, Germany 1459; 1460; $Id: DwiHead.mod,v 1.4.2.1 2007/07/02 13:22:13 mawi Exp $ 1461; 1462; All Rights Reserved 1463; 1464; DwiHead.mod: Declaration of pulseprogram subroutines 1465; for Stejscal Tanner Spinecho and Stimulated echo 1466; preparation 1467; 1468; call 1469; subr DwiPrep(ph1) : diffusion prepartion with RF phaselist 1 1470; subr DwiLoop(Diffl): loop part of diffusion preparation, loops 1471; to label Diffl (as passed as argument) 1472; 1473;************************************************************************* 1474 1475define list<frequency> DwFl0 = {$PVM_DwFlist0} 1476define delay DwD0 = {$PVM_DwD0} 1477define delay DwD1 = {$PVM_DwD1} 1478define delay DwD2 = {$PVM_DwD2} 1479define delay DwD3 = {$PVM_DwD3} 1480define delay DwD4 = {$PVM_DwD4} 1481define delay DwD5 = {$PVM_DwD5} 1482define delay DwD6 = {$PVM_DwD6} 1483define delay DwD7 = {$PVM_DwD7} 1484define delay DwD8 = {$PVM_DwD8} 1485define delay DwD9 = {$PVM_DwD9} 1486define delay DwD10 = {$PVM_DwD10} 1487define delay DwD11 = {$PVM_DwD11} 1488define delay DwD12 = {$PVM_DwD12} 1489define delay DwD13 = {$PVM_DwD13} 1490define delay DwD14 = {$PVM_DwD14} 1491define delay DwD15 = {$PVM_DwD15} 1492define delay DwD16 = {$PVM_DwD16} 1493define delay DwD17 = {$PVM_DwD17} 1494define delay DwD18 = {$PVM_DwD18} 1495define delay DwD19 = {$PVM_DwD19} 1496 1497 1498 1499define pulse DwP0 = {$PVM_DwP0} 1500define pulse DwP1 = {$PVM_DwP1} 1501 1502 1503 1504 1505 1506 1507 1508 1509 1510 1511 1512 1513 1514 1515 1516; #define DwGSP1 grad{PVM_DwSpDir((PVM_TeDwSliceSpoilGrad),direct_scale)|(0)|(0)} 1517 1518 1519 1520 1521; #define Dwfull DiffusionPrepGrad 1522; #define DwGfull grad{(0)|(0)|(Dwfull,no_scale)} 1523 1524 1525 1526 1527 1528lgrad PVM_DwGradRead = PVM_DwNDiffExp 1529lgrad PVM_DwGradPhase = PVM_DwNDiffExp 1530lgrad PVM_DwGradSlice = PVM_DwNDiffExp 1531lgrad PVM_DwGradVec = PVM_DwNDiffExp 1532lgrad PVM_DwSpDir = PVM_DwNDiffExp 1533 1534define loopcounter DwExp = {$PVM_DwNDiffExp} 1535 1536 1537; spinecho stejscal tanner preparation 1538; ======================================= 1539 1540 1541 1542 1543 1544 1545 1546 1547 1548 1549 1550 1551 1552 1553 1554 1555 1556 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 1567 1568 1569 1570 1571 1572 1573 1574 1575 1576 1577 1578 1579 1580 1581 1582 1583 1584 1585 1586 1587 1588 1589 1590 1591 1592 1593 1594 1595 1596 1597 1598 1599 1600 1601 1602 1603 1604 1605 1606 1607 1608; spinecho stejscal tanner for diffusion prep. 1609; =============================================== 1610 1611 1612 1613 1614 1615 1616 1617 1618 1619 1620 1621 1622 1623 1624 1625 1626 1627 1628 1629 1630 1631 1632 1633 1634 1635 1636 1637 1638 1639 1640 1641 1642 1643 1644 1645 1646 1647 1648 1649 1650 1651 1652 1653 1654 1655 1656 1657 1658 1659 1660 1661 1662 1663 1664 1665 1666 1667 1668 1669 1670 1671 1672 1673 1674 1675 1676 1677 1678 1679 1680; stimulated echo stejscal tanner preparation 1681; ============================================== 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 1693 1694 1695 1696 1697 1698 1699 1700 1701 1702 1703 1704 1705 1706 1707 1708 1709 1710 1711 1712 1713 1714 1715 1716 1717 1718 1719 1720 1721 1722 1723 1724 1725 1726 1727 1728 1729 1730 1731 1732 1733 1734 1735 1736 1737 1738 1739 1740 1741 1742 1743 1744 1745 1746 1747 1748 1749 1750 1751 1752 1753 1754 1755 1756 1757 1758 1759 1760 1761 1762 1763 1764 1765 1766 1767 1768 1769 1770 1771; stimulated echo stejscal tanner for diffusion prep 1772; ====================================================== 1773 1774 1775 1776 1777 1778 1779 1780 1781 1782 1783 1784 1785 1786 1787 1788 1789 1790 1791 1792 1793 1794 1795 1796 1797 1798 1799 1800 1801 1802 1803 1804 1805 1806 1807 1808 1809 1810 1811 1812 1813 1814 1815 1816 1817 1818 1819 1820 1821 1822 1823 1824 1825 1826 1827 1828 1829 1830 1831 1832 1833 1834 1835 1836 1837 1838 1839 1840 1841 1842 1843 1844 1845; 1846; Diffusion Preparation module 1847; ======================================= 1848 1849 1850 1851 1852 1853 1854 1855 1856 1857 1858 1859 1860 1861; 1862; Diffusion Preparation module for diffusion prep 1863; ===================================================== 1864 1865 1866 1867 1868 1869 1870 1871 1872 1873 1874 1875 1876 1877 1878 1879 1880 1881 1882 1883; Loop part of DTI module 1884 1885 1886 1887 1888 1889 1890 1891 1892 1893 1894 1895 1896 1897 1898 1899 1900 1901 1902 1903 1904 1905 1906 1907 1908 1909 1910 1911 1912 1913 1914 1915 1916 1917 1918 1919 1920 1921 1922 1923 1924 1925# 23 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 1926 1927# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/epiHead.mod" 1 1928;**************************************************************** 1929; 1930; Copyright (c) 2003 1931; Bruker BioSpin MRI GmbH 1932; D-76275 Ettlingen, Germany 1933; 1934; All Rights Reserved 1935; $Id: epiHead.mod,v 1.7.2.2 2007/07/12 15:08:50 fhen Exp $ 1936; Declaration of pulseprogram parameters for epi module 1937; 1938;**************************************************************** 1939 1940define delay EpiD0 = {$PVM_EpiD0} 1941define delay EpiD1 = {$PVM_EpiD1} 1942define delay EpiD2 = {$PVM_EpiD2} 1943define delay EpiD3 = {$PVM_EpiD3} 1944define delay EpiD4 = {$PVM_EpiD4} 1945define delay EpiD5 = {$PVM_EpiD5} 1946define delay EpiD7 = {$PVM_EpiD7} 1947define delay EpiD8 = {$PVM_EpiD8} 1948define delay EpiD9 = {$PVM_EpiD9} 1949define delay EpiD10 = {$PVM_EpiD10} 1950define delay EpiD11 = {$PVM_EpiD11} 1951define delay EpiD12 = {$PVM_EpiD12} 1952 1953 1954 1955lgrad PVM_EpiInterleavingFunction<2d> = PVM_EpiNShots 1956 1957define delay Epi10u_de 1958"Epi10u_de = 10u - de" 1959 1960define list<delay> EpiVd = {$PVM_EpiVdList} 1961# 24 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 1962 1963 1964 1965lgrad slice = NSLICES 1966 1967fq1b receive \n if (CONFIG_instrument_type != Avance_I) \n { \n dccorr \n } \n if (CONFIG_preemp_type == GREAT_60) \n { \n if (CONFIG_instrument_type != Avance_III) \n { \n 500m setnmr0|34|33|32 \n } \n else \n { \n 200u setnmr0|34|33|32 \n } \n } \n if (CONFIG_preemp_type == DPP_with_SW_Blanking) \n { \n 10u ctrlgrad 0 \n 10u grad{(0)|(0)|(0) } \n 200u setnmr0|34|33|32 \n } 1968 1969zgrad PVM_EpiInterleavingFunction 1970zslice 1971 1972 1973 1974 1975DiffL, 4u 1976# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/TriggerPerPhaseStep.mod" 1 1977;**************************************************************** 1978; 1979; Copyright (c) 1998-2003 1980; Bruker BioSpin MRI GmbH 1981; D-76275 Ettlingen, Germany 1982; 1983; All Rights Reserved 1984; 1985; TriggerPerPhaseStep.mod - Trigger Module 1986; 1987;**************************************************************** 1988; 1989; PVM_TrigD0 --> PVM_EcgTriggerModuleTime = ACQ_trigger_delay 1990; 1991if (PVM_TriggerMode == per_PhaseStep) 1992{ 1993if (ACQ_trigger_enable == 1) 1994{ 1995 10u setnmr3|6 1996if (CONFIG_instrument_type == Avance_III) 1997{ 1998 10u trignl1 1999 10u trigpe3 2000} 2001else 2002{ 2003 10u trigpl1 2004} 2005 10u setnmr3^6 2006 TrigD0 2007} 2008} 2009# 38 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 2010 2011slice, 10u fq8b:f1 2012# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/TriggerPerSlice.mod" 1 2013;**************************************************************** 2014; 2015; Copyright (c) 1998-2003 2016; Bruker BioSpin MRI GmbH 2017; D-76275 Ettlingen, Germany 2018; 2019; All Rights Reserved 2020; 2021; TriggerPerSlice.mod - Trigger Module 2022; 2023;**************************************************************** 2024; 2025; PVM_TrigD0 --> PVM_EcgTriggerModuleTime = ACQ_trigger_delay 2026; 2027if (PVM_TriggerMode == per_Slice) 2028{ 2029if (ACQ_trigger_enable == 1) 2030{ 2031 10u setnmr3|6 2032if (CONFIG_instrument_type == Avance_III) 2033{ 2034 10u trignl1 2035 10u trigpe3 2036} 2037else 2038{ 2039 10u trigpl1 2040} 2041 10u setnmr3^6 2042 TrigD0 2043} 2044} 2045# 40 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 2046 2047;EXEC_begin SatSlices line 2047 (41) SatSlices() 2048 2049if(PVM_FovSatOnOff == 1) 2050{ 2051lgrad PVM_FovSatGrad = PVM_FovSatNSlices 2052lgrad PVM_FovSatSpoiler = 1 2053zgrad PVM_FovSatGrad 2054zgrad PVM_FovSatSpoiler 2055 2056 50u modlis5.res 2057 2058fov9, SatD0 modlis5:f1 grad{PVM_FovSatGrad(100,,direct_scale)|(0)|(0)} 2059 SatD1 gatepulse 1 2060 SatP0:sp25 2061 SatD2 modlis5.inc grad{(0)|(0)|PVM_FovSatSpoiler(100,,no_scale)} 2062 igrad PVM_FovSatGrad 2063 lo to fov9 times SatLp0 2064 SatD0 grad{(0)|(0)|(0)} 2065 20u 2066} 2067 2068;EXEC_end SatSlices line 2047 (41) SatSlices() 2069;EXEC_begin FatSup line 2048 (42) FatSup() 2070 2071if(PVM_FatSupOnOff) 2072{ 2073lgrad PVM_FatSupSpoiler = 1 207410u zgrad PVM_FatSupSpoiler 2075 207640u modlis6:f1 20771m gatepulse 1 2078FsP0:sp26 2079FsD2 grad{(0)|(0)|PVM_FatSupSpoiler(100,,no_scale)} 2080FsD0 groff 208150u 2082} 2083 2084 2085;EXEC_end FatSup line 2048 (42) FatSup() 2086;----------------------------------slice selection------------------ 2087 d1 grad{(0)|(0)|(t0)} fq1:f1 gatepulse 1 2088 p0:sp0 ph0 2089 d4 groff 2090;----------------------------------slice rephase-------------------- 2091 d2 grad{(0)|(0)|(t1)} 2092 d3 groff 2093; subr DwiPrep(ph1) 2094 2095; subr DwiPrep1(ph1) 2096; subr DwiPrep(ph1) 2097;EXEC_begin DwiPrep1 line 2060 (54) DwiPrep1(phase ph2) 2098 2099 if(PVM_DiffPrepMode == 0) 2100 { 2101 if(DiffusionPrepYesNo == Yes) 2102 { 2103;EXEC_begin DwSe1 line 1871 (0) DwSe1(phase ph2) 2104 2105 DwD0 groff 2106 if(PVM_DwDirectScale == Yes) 2107 { 2108 DwD5 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2109 } 2110 else 2111 { 2112 if (DiffusionPrepGradPol == Negative) 2113 { 2114 DwD5 grad{PVM_DwGradRead(-100,no_scale)|PVM_DwGradPhase(-100,no_scale)|PVM_DwGradSlice(-100,no_scale)} 2115 } 2116 if (DiffusionPrepGradPol == Positive) 2117 { 2118 DwD5 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2119 } 2120 } 2121 ; DwD6 groff 2122 DwD7 groff 2123 ;DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2124 2125 if (ControlDiffSpoilerYesNo == Yes) 2126 { 2127 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2128 } 2129 else 2130 { 2131 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2132 } 2133 2134 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} DwFl0:f1 gatepulse 1 2135 DwP0:sp23 ph2 2136 DwD4 2137 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2138 2139 if (ControlDiffSpoilerYesNo == Yes) 2140 { 2141 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2142 } 2143 else 2144 { 2145 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2146 } 2147 2148 ; DwD2 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2149 ; DwD7 groff 2150 DwD6 groff 2151 if(PVM_DwDirectScale == Yes) 2152 { 2153 DwD5 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2154 } 2155 else 2156 { 2157 if (DiffusionPrepGradPol == Negative) 2158 { 2159 DwD5 grad{PVM_DwGradRead(-100,no_scale)|PVM_DwGradPhase(-100,no_scale)|PVM_DwGradSlice(-100,no_scale)} 2160 } 2161 if (DiffusionPrepGradPol == Positive) 2162 { 2163 DwD5 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2164 } 2165 } 2166 if (DiffusionPrepYesNo == Yes) 2167 { 2168 d9 groff 2169 } 2170 2171;EXEC_end DwSe1 line 1871 (0) DwSe1(phase ph2) 2172 } 2173 } 2174 if(PVM_DiffPrepMode == 1) 2175 { 2176 if(DiffusionPrepYesNo == Yes) 2177 { 2178;EXEC_begin DwSte1 line 1878 (0) DwSte1(phase ph2) 2179 2180 DwD0 groff 2181 if(PVM_DwDirectScale == Yes) 2182 { 2183 DwD9 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2184 } 2185 else 2186 { 2187 ; DwD9 grad{(0)|(0)|(DiffusionPrepGrad,no_scale)} 2188 DwD9 grad{(DiffusionPrepGrad*DiffusionPrepVec[0],no_scale)|(DiffusionPrepGrad*DiffusionPrepVec[1],no_scale)|(DiffusionPrepGrad*DiffusionPrepVec[2],no_scale)} 2189 } 2190 ; DwD6 groff 2191 DwD8 groff 2192 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2193 2194 if (ControlDiffSpoilerYesNo == Yes) 2195 { 2196 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2197 } 2198 else 2199 { 2200 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2201 } 2202 2203 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} DwFl0:f1 gatepulse 1 2204 DwP0:sp23 ph2 2205 DwD7 2206 ; DwD4 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2207 2208 if (ControlDiffSpoilerYesNo == Yes) 2209 { 2210 DwD4 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2211 } 2212 else 2213 { 2214 DwD4 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2215 } 2216 2217 DwD5 groff 2218 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} gatepulse 1 2219 DwP0:sp23 ph2 2220 DwD7 2221 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2222 2223 if (ControlDiffSpoilerYesNo == Yes) 2224 { 2225 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler1Grad),direct_scale)|(0)|(0)} 2226 } 2227 else 2228 { 2229 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2230 } 2231 2232 ; DwD8 groff 2233 DwD6 groff 2234 if(PVM_DwDirectScale == Yes) 2235 { 2236 DwD9 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2237 } 2238 else 2239 { 2240 ; DwD9 grad{(0)|(0)|(DiffusionPrepGrad,no_scale)} 2241 DwD9 grad{(DiffusionPrepGrad*DiffusionPrepVec[0],no_scale)|(DiffusionPrepGrad*DiffusionPrepVec[1],no_scale)|(DiffusionPrepGrad*DiffusionPrepVec[2],no_scale)} 2242 } 2243 if (DiffusionPrepYesNo == Yes) 2244 { 2245 d9 groff 2246 } 2247 2248;EXEC_end DwSte1 line 1878 (0) DwSte1(phase ph2) 2249 } 2250 } 2251 2252;EXEC_end DwiPrep1 line 2060 (54) DwiPrep1(phase ph2) 2253;EXEC_begin DwiPrep line 2061 (55) DwiPrep(phase ph1) 2254 2255if(PVM_DiffPrepMode == 0) 2256{ 2257;EXEC_begin DwSe line 1853 (0) DwSe(phase ph1) 2258 2259 if (DiffusionPrepYesNo == No) 2260 { 2261 DwD0 groff 2262 } 2263 if(PVM_DwDirectScale == Yes) 2264 { 2265 DwD5 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2266 } 2267 else 2268 { 2269 DwD5 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2270 } 2271 DwD6 groff 2272 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2273 2274 2275 if (DiffusionPrepYesNo == Yes) 2276 { 2277 if (ControlDiffSpoilerYesNo == Yes) 2278 { 2279 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler2Grad),direct_scale)|(0)|(0)} 2280 } 2281 else 2282 { 2283 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2284 } 2285 } 2286 else 2287 { 2288 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2289 } 2290 2291 2292 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} DwFl0:f1 gatepulse 1 2293 DwP0:sp23 ph1 2294 DwD4 2295 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2296 2297 if (DiffusionPrepYesNo == Yes) 2298 { 2299 if (ControlDiffSpoilerYesNo == Yes) 2300 { 2301 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler2Grad),direct_scale)|(0)|(0)} 2302 } 2303 else 2304 { 2305 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2306 } 2307 } 2308 else 2309 { 2310 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2311 } 2312 2313 DwD7 groff 2314 if(PVM_DwDirectScale == Yes) 2315 { 2316 DwD5 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2317 } 2318 else 2319 { 2320 DwD5 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2321 } 2322 DwD1 groff 2323 2324;EXEC_end DwSe line 1853 (0) DwSe(phase ph1) 2325} 2326if(PVM_DiffPrepMode == 1) 2327{ 2328;EXEC_begin DwSte line 1857 (0) DwSte(phase ph1) 2329 2330 if (DiffusionPrepYesNo == No) 2331 { 2332 DwD0 groff 2333 } 2334 if(PVM_DwDirectScale == Yes) 2335 { 2336 DwD9 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2337 } 2338 else 2339 { 2340 DwD9 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2341 } 2342 DwD6 groff 2343 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2344 2345 if (DiffusionPrepYesNo == Yes) 2346 { 2347 if (ControlDiffSpoilerYesNo == Yes) 2348 { 2349 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler2Grad),direct_scale)|(0)|(0)} 2350 } 2351 else 2352 { 2353 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2354 } 2355 } 2356 else 2357 { 2358 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2359 } 2360 2361 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} DwFl0:f1 gatepulse 1 2362 DwP0:sp23 ph1 2363 DwD7 2364 ; DwD4 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2365 2366 if (DiffusionPrepYesNo == Yes) 2367 { 2368 if (ControlDiffSpoilerYesNo == Yes) 2369 { 2370 DwD4 grad{PVM_DwSpDir((DiffusionSpoiler2Grad),direct_scale)|(0)|(0)} 2371 } 2372 else 2373 { 2374 DwD4 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2375 } 2376 } 2377 else 2378 { 2379 DwD4 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2380 } 2381 2382 DwD5 groff 2383 DwD3 grad{(0)|(0)|(PVM_DwSliceGrad,no_scale)} gatepulse 1 2384 DwP0:sp23 ph1 2385 DwD7 2386 ; DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2387 2388 if (DiffusionPrepYesNo == Yes) 2389 { 2390 if (ControlDiffSpoilerYesNo == Yes) 2391 { 2392 DwD2 grad{PVM_DwSpDir((DiffusionSpoiler2Grad),direct_scale)|(0)|(0)} 2393 } 2394 else 2395 { 2396 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2397 } 2398 } 2399 else 2400 { 2401 DwD2 grad{PVM_DwSpDir((30),direct_scale)|(0)|(0)} 2402 } 2403 2404 DwD8 groff 2405 if(PVM_DwDirectScale == Yes) 2406 { 2407 DwD9 grad{PVM_DwGradVec(100,direct_scale)|(0)|(0)} 2408 } 2409 else 2410 { 2411 DwD9 grad{PVM_DwGradRead(100,no_scale)|PVM_DwGradPhase(100,no_scale)|PVM_DwGradSlice(100,no_scale)} 2412 } 2413 DwD1 groff 2414 2415;EXEC_end DwSte line 1857 (0) DwSte(phase ph1) 2416} 2417 2418;EXEC_end DwiPrep line 2061 (55) DwiPrep(phase ph1) 2419 2420 if "lcDs > 0" goto acqDs 2421# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/epi.mod" 1 2422;**************************************************************** 2423; 2424; Copyright (c) 2002-2005 2425; Bruker BioSpin MRI GmbH 2426; D-76275 Ettlingen, Germany 2427; 2428; All Rights Reserved 2429; 2430; epi.mod - an Echo-Planar Imaging module 2431; 2432;**************************************************************** 2433 2434 2435;-------- version with shaped gradients: 2436if(PVM_EpiRampMode != SystemRamp) 2437{ 2438 ;5u fqatofqb:f1 2439 rdepa \n deparx adc ph0 setrtp1|2 syrec \n derxadc ph1:r setrtp1|1 \n deadc setrtp1|0|8 2440 Epi10u_de 2441 if(PVM_EpiNShots != 1) 2442 { 2443 if(PVM_EpiEchoTimeShifting == Yes) 2444 { 2445 EpiVd EpiVd.inc 2446 } 2447 } 2448 2449 if (PVM_EpiGradSync == Yes) 2450 { 2451 1u trigpe3 2452 } 2453 2454 if(PVM_EpiPrefixNavYes) ;prefix navigator 2455 { 2456 EpiD12 cpdngs30:f1 2457 } 2458 2459 10u gc_control 2460 { 2461 EpiD4 grad{EpiShape1(100,EpiShape1Size)| EpiShape3(100,EpiShape3Size) |(0)} 2462 EpiD5 grad{EpiShape9(100,EpiShape9Size)| EpiShape11(100,EpiShape11Size)*PVM_EpiInterleavingFunction(100)|(0)} 2463 EpiD11 grad{EpiShape8(100,EpiShape8Size)|(0) |(0)} ;plateau up 2464 loop PVM_EpiEchoCounter 2465 { 2466 EpiD5 grad{EpiShape2(100,EpiShape2Size) |EpiShape4(100,EpiShape4Size) |(0)} ;ramp down 2467 EpiD11 grad{(0)-EpiShape8(100,EpiShape8Size)|(0) |(0)} ;plateau down 2468 EpiD5 grad{(0)-EpiShape2(100,EpiShape2Size)|EpiShape7(100,EpiShape7Size) |(0)} ;ramp up 2469 EpiD11 grad{EpiShape8(100,EpiShape8Size) |(0) |(0)} ;plateau up 2470 } 2471 EpiD5 grad{EpiShape10(100,EpiShape10Size)| EpiShape11(100,EpiShape11Size)*PVM_EpiInterleavingFunction(100)|(0)} 2472 EpiD4 grad{EpiShape5(100,EpiShape5Size)| EpiShape6(100,EpiShape6Size) |(0)} 2473 } 2474 EpiD1 2475 2476 if(PVM_EpiPrefixNavYes) ;prefix navigator: adc is already running 2477 { 2478 EpiD2 2479 } 2480 if(!PVM_EpiPrefixNavYes) ;no prefix navigator: start adc now 2481 { 2482 EpiD2 cpdngs30:f1 2483 } 2484 EpiD3 2485 EpiD0 eoscnp 2486 2487 if(PVM_EpiNShots != 1) 2488 { 2489 if(PVM_EpiEchoTimeShifting == Yes) 2490 { 2491 EpiVd EpiVd.inc 2492 } 2493 } 2494} ;--------end of version 2495 2496;----------------------- version with system ramps --------------------------- 2497if(PVM_EpiRampMode == SystemRamp) 2498{ 2499 ;5u fqatofqb:f1 2500 rdepa \n deparx adc ph0 setrtp1|2 syrec \n derxadc ph1:r setrtp1|1 \n deadc setrtp1|0|8 2501 Epi10u_de 2502 if(PVM_EpiNShots != 1) 2503 { 2504 if(PVM_EpiEchoTimeShifting == Yes) 2505 { 2506 EpiVd EpiVd.inc 2507 } 2508 } 2509 if (PVM_EpiGradSync == Yes) 2510 { 2511 1u trigpe3 2512 } 2513 if(PVM_EpiPrefixNavYes) ;prefix navigator 2514 { 2515 EpiD12 cpdngs30:f1 2516 } 2517 2518 10u gc_control 2519 { 2520 EpiD7 grad{PVM_EpiReadDephGrad(100)|PVM_EpiPhaseDephGrad(100)+PVM_EpiInterleavingFunction(100*PVM_EpiPhaseEncGrad)|(0)} 2521 EpiD8 groff 2522 EpiD9 grad{PVM_EpiReadEvenGrad(100)|(0)|(0)} 2523 loop PVM_EpiEchoCounter 2524 { 2525 EpiD10 grad{(0) |PVM_EpiBlipEvenGrad(100)|(0)} 2526 EpiD9 grad{PVM_EpiReadOddGrad(100) |(0) |(0)} 2527 EpiD10 grad{(0) |PVM_EpiBlipOddGrad(100 )|(0)} 2528 EpiD9 grad{PVM_EpiReadEvenGrad(100)|(0) |(0)} 2529 } 2530 EpiD8 groff 2531 EpiD7 grad{PVM_EpiReadDephGrad(100)|PVM_EpiPhaseDephGrad(100)+PVM_EpiInterleavingFunction(100*PVM_EpiPhaseRewGrad)|(0)} 2532 groff 2533 } 2534 EpiD1 2535 2536 if(PVM_EpiPrefixNavYes) ;prefix navigator: adc is already running 2537 { 2538 EpiD2 2539 } 2540 if(!PVM_EpiPrefixNavYes) ;no prefix navigator: start adc now 2541 { 2542 EpiD2 cpdngs30:f1 2543 } 2544 2545 EpiD3 2546 EpiD0 eoscnp 2547 if(PVM_EpiNShots != 1) 2548 { 2549 if(PVM_EpiEchoTimeShifting == Yes) 2550 { 2551 EpiVd EpiVd.inc 2552 } 2553 } 2554} 2555;-------- end of version 2556 2557# 58 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 2558 2559goOn, 2.5u 2560;----------------------------------slice loop----------------------- 2561 10u islice 2562 d0 DwFl0.inc 2563 lo to slice times NSLICES 2564 1u zslice 2565;----------------------------------averaging loop------------------- 2566 d5 2567 2568 "lcDs = lcDs - 1" 2569 if "lcDs >= 0" goto DiffL ;dummy scans 2570 1u ipp0 2571 1u ipp1 2572 1u ipp2 2573 lo to DiffL times NA 2574;----------------------------------2d loop-------------------------- 2575 1u igrad PVM_EpiInterleavingFunction 2576 lo to DiffL times l0 2577 1u zgrad PVM_EpiInterleavingFunction 2578;----------------------------------diffusion loop------------------- 2579;EXEC_begin DwiLoop line 2222 (79) DwiLoop(any DiffL) 2580 2581if(PVM_DwFlag1 == 0) 2582{ 2583 if( ACQ_scan_type == Scan_Experiment) 2584 { 2585 0u igrad PVM_DwSpDir 2586 1u igrad PVM_DwGradRead 2587 1u igrad PVM_DwGradPhase 2588 1u igrad PVM_DwGradSlice 2589 1u igrad PVM_DwGradVec 2590 } 2591 else 2592 { 2593 0u zgrad PVM_DwSpDir 2594 1u zgrad PVM_DwGradRead 2595 1u zgrad PVM_DwGradPhase 2596 1u zgrad PVM_DwGradSlice 2597 1u zgrad PVM_DwGradVec 2598 } 2599} 2600else 2601{ 2602 0u igrad PVM_DwSpDir 2603 1u igrad PVM_DwGradRead 2604 1u igrad PVM_DwGradPhase 2605 1u igrad PVM_DwGradSlice 2606 1u igrad PVM_DwGradVec 2607} 2608 2609 2610lo to DiffL times DwExp 2611 2612 0u zgrad PVM_DwSpDir 2613 1u zgrad PVM_DwGradRead 2614 1u zgrad PVM_DwGradPhase 2615 1u zgrad PVM_DwGradSlice 2616 1u zgrad PVM_DwGradVec 2617 2618 2619;EXEC_end DwiLoop line 2222 (79) DwiLoop(any DiffL) 2620;----------------------------------repetitions loop----------------- 2621 lo to DiffL times PVM_NRepetitions 2622 2623if (ACQ_scan_type != Scan_Experiment) \n{ \n goto DiffL \n} 2624 goto bye 2625 2626; ---- empty acquisition for dummy scans 2627acqDs, 1u 2628# 1 "/opt/PV5.0/exp/stan/nmr/lists/pp/epiDum.mod" 1 2629;**************************************************************** 2630; 2631; Copyright (c) 2002-2005 2632; Bruker BioSpin MRI GmbH 2633; D-76275 Ettlingen, Germany 2634; 2635; All Rights Reserved 2636; 2637; epiDum.mod - a version the Echo-Planar Imaging module without phase 2638; acquisition (for the dummy scans) 2639; 2640;**************************************************************** 2641 2642 2643 2644;-------- version with shaped gradients: 2645if(PVM_EpiRampMode != SystemRamp) 2646{ 2647 ;5u fqatofqb:f1 2648 ;rdepa \n deparx adc ph0 setrtp1|2 syrec \n derxadc ph1:r setrtp1|1 \n deadc setrtp1|0|8 2649 10u 2650 if(PVM_EpiNShots != 1) 2651 { 2652 if(PVM_EpiEchoTimeShifting == Yes) 2653 { 2654 EpiVd ;EpiVd.inc 2655 } 2656 } 2657 2658 if (PVM_EpiGradSync == Yes) 2659 { 2660 1u trigpe3 2661 } 2662 2663 if(PVM_EpiPrefixNavYes) ;prefix navigator 2664 { 2665 EpiD12 ;cpdngs30:f1 2666 } 2667 2668 10u gc_control 2669 { 2670 EpiD4 grad{EpiShape1(100,EpiShape1Size)| (0) |(0)} 2671 EpiD5 grad{EpiShape9(100,EpiShape9Size)| (0) |(0)} 2672 EpiD11 grad{EpiShape8(100,EpiShape8Size)| (0) |(0)} ;plateau up 2673 loop PVM_EpiEchoCounter 2674 { 2675 EpiD5 grad{EpiShape2(100,EpiShape2Size) |(0) |(0)} ;ramp down 2676 EpiD11 grad{(0)-EpiShape8(100,EpiShape8Size)|(0) |(0)} ;plateau down 2677 EpiD5 grad{(0)-EpiShape2(100,EpiShape2Size)|(0) |(0)} ;ramp up 2678 EpiD11 grad{EpiShape8(100,EpiShape8Size) |(0) |(0)} ;plateau up 2679 } 2680 EpiD5 grad{EpiShape10(100,EpiShape10Size)| (0) |(0)} 2681 EpiD4 grad{EpiShape5(100,EpiShape5Size) | (0) |(0)} 2682 } 2683 EpiD1 2684 2685 if(PVM_EpiPrefixNavYes) ;prefix navigator: adc is already running 2686 { 2687 EpiD2 2688 } 2689 if(!PVM_EpiPrefixNavYes) ;no prefix navigator: start adc now 2690 { 2691 EpiD2 ;cpdngs30:f1 2692 } 2693 EpiD3 2694 EpiD0 ;eoscnp 2695 2696 if(PVM_EpiNShots != 1) 2697 { 2698 if(PVM_EpiEchoTimeShifting == Yes) 2699 { 2700 EpiVd ;EpiVd.inc 2701 } 2702 } 2703} ;--------end of version 2704 2705;----------------------- version with system ramps --------------------------- 2706if(PVM_EpiRampMode == SystemRamp) 2707{ 2708 ;5u fqatofqb:f1 2709 ;rdepa \n deparx adc ph0 setrtp1|2 syrec \n derxadc ph1:r setrtp1|1 \n deadc setrtp1|0|8 2710 10u 2711 if(PVM_EpiNShots != 1) 2712 { 2713 if(PVM_EpiEchoTimeShifting == Yes) 2714 { 2715 EpiVd ;EpiVd.inc 2716 } 2717 } 2718 if (PVM_EpiGradSync == Yes) 2719 { 2720 1u trigpe3 2721 } 2722 if(PVM_EpiPrefixNavYes) ;prefix navigator 2723 { 2724 EpiD12 ;cpdngs30:f1 2725 } 2726 2727 10u gc_control 2728 { 2729 EpiD7 grad{PVM_EpiReadDephGrad(100)|(0)|(0)} 2730 EpiD8 groff 2731 EpiD9 grad{PVM_EpiReadEvenGrad(100)|(0)|(0)} 2732 loop PVM_EpiEchoCounter 2733 { 2734 EpiD10 grad{(0) |(0) |(0)} 2735 EpiD9 grad{PVM_EpiReadOddGrad(100) |(0) |(0)} 2736 EpiD10 grad{(0) |(0) |(0)} 2737 EpiD9 grad{PVM_EpiReadEvenGrad(100) |(0) |(0)} 2738 } 2739 EpiD8 groff 2740 EpiD7 grad{PVM_EpiReadDephGrad(100)| (0)|(0)} 2741 groff 2742 } 2743 EpiD1 2744 2745 if(PVM_EpiPrefixNavYes) ;prefix navigator: adc is already running 2746 { 2747 EpiD2 2748 } 2749 if(!PVM_EpiPrefixNavYes) ;no prefix navigator: start adc now 2750 { 2751 EpiD2 ;cpdngs30:f1 2752 } 2753 2754 EpiD3 2755 EpiD0 ;eoscnp 2756 if(PVM_EpiNShots != 1) 2757 { 2758 if(PVM_EpiEchoTimeShifting == Yes) 2759 { 2760 EpiVd ;EpiVd.inc 2761 } 2762 } 2763} 2764;-------- end of version 2765# 88 "/opt/PV5.0/exp/stan/nmr/lists/pp/comp_DblDtiEpi.ppg" 2 2766 2767 goto goOn 2768 2769 2770 2771bye, 1u 2772exit 2773 2774 2775ph0 = 0 2 0 2 2776ph2 = 1 3 3 1 2777ph1 = 1 1 1 1 2778 2779; ph0 = 0 0 2780; ph2 = 0 2 2781; ph1 = 0 0 2782 2783; ph0 = 0 2 2784; ph1 = 1 2785 2786