/ruffus/test/test_inputs_with_multiple_args_raising_exception.py
https://code.google.com/p/ruffus/ · Python · 193 lines · 116 code · 49 blank · 28 comment · 13 complexity · 9a116a65d8a02851d7d82a5e801dde68 MD5 · raw file
- #!/usr/bin/env python
- """
- test_inputs_with_multiple_args_raising_exception.py
-
- inputs with multiple arguments should raise an exception
-
- """
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- # options
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- from optparse import OptionParser
- import sys, os
- import os.path
- import StringIO
- import re,time
- # add self to search path for testing
- exe_path = os.path.split(os.path.abspath(sys.argv[0]))[0]
- sys.path.insert(0,os.path.abspath(os.path.join(exe_path,"..", "..")))
- if __name__ == '__main__':
- module_name = os.path.split(sys.argv[0])[1]
- module_name = os.path.splitext(module_name)[0];
- else:
- module_name = __name__
- import ruffus
- print "\tRuffus Version = ", ruffus.__version__
- parser = OptionParser(version="%%prog v1.0, ruffus v%s" % ruffus.ruffus_version.__version)
- parser.add_option("-t", "--target_tasks", dest="target_tasks",
- action="append",
- default = list(),
- metavar="JOBNAME",
- type="string",
- help="Target task(s) of pipeline.")
- parser.add_option("-f", "--forced_tasks", dest="forced_tasks",
- action="append",
- default = list(),
- metavar="JOBNAME",
- type="string",
- help="Pipeline task(s) which will be included even if they are up to date.")
- parser.add_option("-j", "--jobs", dest="jobs",
- default=1,
- metavar="jobs",
- type="int",
- help="Specifies the number of jobs (commands) to run simultaneously.")
- parser.add_option("-v", "--verbose", dest = "verbose",
- action="count", default=0,
- help="Print more verbose messages for each additional verbose level.")
- parser.add_option("-d", "--dependency", dest="dependency_file",
- #default="simple.svg",
- metavar="FILE",
- type="string",
- help="Print a dependency graph of the pipeline that would be executed "
- "to FILE, but do not execute it.")
- parser.add_option("-F", "--dependency_graph_format", dest="dependency_graph_format",
- metavar="FORMAT",
- type="string",
- default = 'svg',
- help="format of dependency graph file. Can be 'ps' (PostScript), "+
- "'svg' 'svgz' (Structured Vector Graphics), " +
- "'png' 'gif' (bitmap graphics) etc ")
- parser.add_option("-n", "--just_print", dest="just_print",
- action="store_true", default=False,
- help="Print a description of the jobs that would be executed, "
- "but do not execute them.")
- parser.add_option("-M", "--minimal_rebuild_mode", dest="minimal_rebuild_mode",
- action="store_true", default=False,
- help="Rebuild a minimum of tasks necessary for the target. "
- "Ignore upstream out of date tasks if intervening tasks are fine.")
- parser.add_option("-K", "--no_key_legend_in_graph", dest="no_key_legend_in_graph",
- action="store_true", default=False,
- help="Do not print out legend and key for dependency graph.")
- parser.add_option("-H", "--draw_graph_horizontally", dest="draw_horizontally",
- action="store_true", default=False,
- help="Draw horizontal dependency graph.")
- parameters = [
- ]
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- # imports
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- import StringIO
- import re
- import operator
- import sys,os
- from collections import defaultdict
- import random
- sys.path.append(os.path.abspath(os.path.join(exe_path,"..", "..")))
- from ruffus import *
- # use simplejson in place of json for python < 2.6
- try:
- import json
- except ImportError:
- import simplejson
- json = simplejson
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- # Main logic
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- # get help string
- f =StringIO.StringIO()
- parser.print_help(f)
- helpstr = f.getvalue()
- (options, remaining_args) = parser.parse_args()
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- # Tasks
- #88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888
- try:
- @transform(None, regex("b"), inputs("a", "b"), "task_1.output")
- def task_1 (i, o):
- for f in o:
- open(f, 'w')
- except ruffus.ruffus_exceptions.error_task_transform_inputs_multiple_args:
- print "\tExpected exception thrown"
- sys.exit(0)
- raise Exception("Inputs(...) with multiple arguments should have thrown an exception")
- import unittest
- class Test_task_mkdir(unittest.TestCase):
- def setUp (self):
- """
- """
- pass
-
- def tearDown (self):
- """
- """
- pass
- def test_no_re_match (self):
- pipeline_run([task_1], options.forced_tasks, multiprocess = options.jobs,
- logger = stderr_logger if options.verbose else black_hole_logger,
- gnu_make_maximal_rebuild_mode = not options.minimal_rebuild_mode,
- verbose = options.verbose)
-
- if __name__ == '__main__':
- if options.just_print:
- pipeline_printout(sys.stdout, options.target_tasks, options.forced_tasks,
- verbose = options.verbose,
- gnu_make_maximal_rebuild_mode = not options.minimal_rebuild_mode)
- elif options.dependency_file:
- pipeline_printout_graph ( open(options.dependency_file, "w"),
- options.dependency_graph_format,
- options.target_tasks,
- options.forced_tasks,
- draw_vertically = not options.draw_horizontally,
- gnu_make_maximal_rebuild_mode = not options.minimal_rebuild_mode,
- no_key_legend = options.no_key_legend_in_graph)
- else:
- sys.argv= sys.argv[0:1]
- unittest.main()