/FiniteElasticity/QuadraticEllipsoid/src/QuadraticEllipsoidExample.f90
http://github.com/xyan075/examples · Fortran Modern · 559 lines · 382 code · 71 blank · 106 comment · 0 complexity · 85f98210a478311aca59b9681ddd0f59 MD5 · raw file
- !> \file
- !> \author Chris Bradley
- !> \brief This is an example program to solve a finite elasticity equation using openCMISS calls.
- !>
- !> \section LICENSE
- !>
- !> Version: MPL 1.1/GPL 2.0/LGPL 2.1
- !>
- !> The contents of this file are subject to the Mozilla Public License
- !> Version 1.1 (the "License"); you may not use this file except in
- !> compliance with the License. You may obtain a copy of the License at
- !> http://www.mozilla.org/MPL/
- !>
- !> Software distributed under the License is distributed on an "AS IS"
- !> basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
- !> License for the specific language governing rights and limitations
- !> under the License.
- !>
- !> The Original Code is openCMISS
- !>
- !> The Initial Developer of the Original Code is University of Auckland,
- !> Auckland, New Zealand and University of Oxford, Oxford, United
- !> Kingdom. Portions created by the University of Auckland and University
- !> of Oxford are Copyright (C) 2007 by the University of Auckland and
- !> the University of Oxford. All Rights Reserved.
- !>
- !> Contributor(s): Jack Lee
- !>
- !> Alternatively, the contents of this file may be used under the terms of
- !> either the GNU General Public License Version 2 or later (the "GPL"), or
- !> the GNU Lesser General Public License Version 2.1 or later (the "LGPL"),
- !> in which case the provisions of the GPL or the LGPL are applicable instead
- !> of those above. If you wish to allow use of your version of this file only
- !> under the terms of either the GPL or the LGPL, and not to allow others to
- !> use your version of this file under the terms of the MPL, indicate your
- !> decision by deleting the provisions above and replace them with the notice
- !> and other provisions required by the GPL or the LGPL. If you do not delete
- !> the provisions above, a recipient may use your version of this file under
- !> the terms of any one of the MPL, the GPL or the LGPL.
- !>
- !> \example FiniteElasticity/UniAxialExtension/src/UniAxialExtensionExample.f90
- !! Example program to solve a finite elasticity equation using openCMISS calls.
- !! \par Latest Builds:
- !! \li <a href='http://autotest.bioeng.auckland.ac.nz/opencmiss-build/logs_x86_64-linux/FiniteElasticity/UniAxialExtension/build-intel'>Linux Intel Build</a>
- !! \li <a href='http://autotest.bioeng.auckland.ac.nz/opencmiss-build/logs_x86_64-linux/FiniteElasticity/UniAxialExtension/build-gnu'>Linux GNU Build</a>
- !<
- !> Main program
- PROGRAM QUADRATICELLIPSOIDEEXAMPLE
- USE OPENCMISS
- USE MPI
- #ifdef WIN32
- USE IFQWIN
- #endif
- IMPLICIT NONE
- !Test program parameters
-
- REAL(CMISSDP), PARAMETER :: PI=3.14159_CMISSDP
- REAL(CMISSDP), PARAMETER :: LONG_AXIS=2.0_CMISSDP
- REAL(CMISSDP), PARAMETER :: SHORT_AXIS=1.0_CMISSDP
- REAL(CMISSDP), PARAMETER :: WALL_THICKNESS=0.5_CMISSDP
- REAL(CMISSDP), PARAMETER :: CUTOFF_ANGLE=1.5708_CMISSDP
- REAL(CMISSDP), PARAMETER :: FIBRE_SLOPE_INTERSECTION=1.73205_CMISSDP !Slope of fibres in base endocardium = 60 degrees
- REAL(CMISSDP), PARAMETER :: FIBRE_SLOPE_CHANGE=-3.4641_CMISSDP !Slope change of fibres from 60 to -60 degrees in transmural direction
- REAL(CMISSDP), PARAMETER :: SHEET_SLOPE_BASE_ENDO=1.0_CMISSDP !Slope of sheet at base endocardium
- REAL(CMISSDP), PARAMETER :: INNER_PRESSURE=2.0_CMISSDP !Positive is compressive
- REAL(CMISSDP), PARAMETER :: OUTER_PRESSURE=0.0_CMISSDP !Positive is compressive
- INTEGER(CMISSIntg), PARAMETER :: NumberGlobalXElements=4 ! X ==NUMBER_GLOBAL_CIRCUMFERENTIAL_ELEMENTS
- INTEGER(CMISSIntg), PARAMETER :: NumberGlobalYElements=4 ! Y ==NUMBER_GLOBAL_LONGITUDINAL_ELEMENTS
- INTEGER(CMISSIntg), PARAMETER :: NumberGlobalZElements=1 ! Z ==NUMBER_GLOBAL_TRANSMURAL_ELEMENTS
- INTEGER(CMISSIntg) :: NumberOfDomains
- INTEGER(CMISSIntg), PARAMETER :: CoordinateSystemUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: NumberOfSpatialCoordinates=3
- INTEGER(CMISSIntg), PARAMETER :: RegionUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: QuadraticBasisUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: QuadraticCollapsedBasisUserNumber=2
- INTEGER(CMISSIntg), PARAMETER :: LinearBasisUserNumber=3
- INTEGER(CMISSIntg), PARAMETER :: LinearCollapsedBasisUserNumber=4
- INTEGER(CMISSIntg), PARAMETER :: MeshUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: GeneratedMeshUserNumber=2
- INTEGER(CMISSIntg), PARAMETER :: DecompositionUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: DerivativeUserNumber=1
-
- INTEGER(CMISSIntg), PARAMETER :: NumberOfMeshDimensions=3
- INTEGER(CMISSIntg), PARAMETER :: NumberOfXiCoordinates=3
- INTEGER(CMISSIntg), PARAMETER :: NumberOfMeshComponents=2
- INTEGER(CMISSIntg), PARAMETER :: QuadraticMeshComponentNumber=1
- INTEGER(CMISSIntg), PARAMETER :: LinearMeshComponentNumber=2
- INTEGER(CMISSIntg), PARAMETER :: TotalNumberOfElements=1
- INTEGER(CMISSIntg), PARAMETER :: FieldGeometryUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: FieldGeometryNumberOfVariables=1
- INTEGER(CMISSIntg), PARAMETER :: FieldGeometryNumberOfComponents=3
- INTEGER(CMISSIntg), PARAMETER :: FieldFibreUserNumber=2
- INTEGER(CMISSIntg), PARAMETER :: FieldFibreNumberOfVariables=1
- INTEGER(CMISSIntg), PARAMETER :: FieldFibreNumberOfComponents=3
- INTEGER(CMISSIntg), PARAMETER :: FieldMaterialUserNumber=3
- INTEGER(CMISSIntg), PARAMETER :: FieldMaterialNumberOfVariables=1
- INTEGER(CMISSIntg), PARAMETER :: FieldMaterialNumberOfComponents=2
- INTEGER(CMISSIntg), PARAMETER :: FieldDependentUserNumber=4
- INTEGER(CMISSIntg), PARAMETER :: FieldDependentNumberOfVariables=2
- INTEGER(CMISSIntg), PARAMETER :: FieldDependentNumberOfComponents=4
- INTEGER(CMISSIntg), PARAMETER :: EquationSetUserNumber=1
- INTEGER(CMISSIntg), PARAMETER :: EquationsSetFieldUserNumber=13
- INTEGER(CMISSIntg), PARAMETER :: ProblemUserNumber=1
- !Program types
- !Program variables
- INTEGER(CMISSIntg) :: MPI_IERROR
- INTEGER(CMISSIntg) :: EquationsSetIndex
- INTEGER(CMISSIntg) :: NumberOfComputationalNodes,ComputationalNodeNumber
- REAL(CMISSDP) :: FibreFieldAngle(3)
- REAL(CMISSDP) :: nu,theta,omega,XI3,XI3delta,XI2delta, zero
- INTEGER(CMISSIntg) ::i,j,k,component_idx,node_idx,TOTAL_NUMBER_NODES_XI(3)
- !For grabbing surfaces
- INTEGER(CMISSIntg) :: InnerNormalXi,OuterNormalXi,TopNormalXi
- INTEGER(CMISSIntg), ALLOCATABLE :: InnerSurfaceNodes(:)
- INTEGER(CMISSIntg), ALLOCATABLE :: OuterSurfaceNodes(:)
- INTEGER(CMISSIntg), ALLOCATABLE :: TopSurfaceNodes(:)
- INTEGER(CMISSIntg) :: NN,NODE,NodeDomain
- REAL(CMISSDP) :: XCoord,YCoord,ZCoord
- LOGICAL :: X_FIXED,Y_FIXED,X_OKAY,Y_OKAY
- !CMISS variables
- TYPE(CMISSBasisType) :: QuadraticBasis,QuadraticCollapsedBasis,LinearBasis,LinearCollapsedBasis
- TYPE(CMISSBoundaryConditionsType) :: BoundaryConditions
- TYPE(CMISSCoordinateSystemType) :: CoordinateSystem, WorldCoordinateSystem
- TYPE(CMISSMeshType) :: Mesh
- TYPE(CMISSGeneratedMeshType) :: GeneratedMesh
- TYPE(CMISSDecompositionType) :: Decomposition
- TYPE(CMISSEquationsType) :: Equations
- TYPE(CMISSEquationsSetType) :: EquationsSet
- TYPE(CMISSFieldType) :: GeometricField,FibreField,MaterialField,DependentField,EquationsSetField
- TYPE(CMISSFieldsType) :: Fields
- TYPE(CMISSProblemType) :: Problem
- TYPE(CMISSRegionType) :: Region,WorldRegion
- TYPE(CMISSSolverType) :: Solver,LinearSolver
- TYPE(CMISSSolverEquationsType) :: SolverEquations
- #ifdef WIN32
- !Quickwin type
- LOGICAL :: QUICKWIN_STATUS=.FALSE.
- TYPE(WINDOWCONFIG) :: QUICKWIN_WINDOW_CONFIG
- #endif
- !Generic CMISS variables
- INTEGER(CMISSIntg) :: Err
- #ifdef WIN32
- !Initialise QuickWin
- QUICKWIN_WINDOW_CONFIG%TITLE="General Output" !Window title
- QUICKWIN_WINDOW_CONFIG%NUMTEXTROWS=-1 !Max possible number of rows
- QUICKWIN_WINDOW_CONFIG%MODE=QWIN$SCROLLDOWN
- !Set the window parameters
- QUICKWIN_STATUS=SETWINDOWCONFIG(QUICKWIN_WINDOW_CONFIG)
- !If attempt fails set with system estimated values
- IF(.NOT.QUICKWIN_STATUS) QUICKWIN_STATUS=SETWINDOWCONFIG(QUICKWIN_WINDOW_CONFIG)
- #endif
- !Intialise cmiss
- CALL CMISSInitialise(WorldCoordinateSystem,WorldRegion,Err)
- CALL CMISSErrorHandlingModeSet(CMISS_ERRORS_TRAP_ERROR,Err)
- WRITE(*,'(A)') "Program starting."
- !Set all diganostic levels on for testing
- CALL CMISSDiagnosticsSetOn(CMISS_FROM_DIAG_TYPE,(/1,2,3,4,5/),"Diagnostics",(/"PROBLEM_FINITE_ELEMENT_CALCULATE"/),Err)
- !Get the number of computational nodes and this computational node number
- CALL CMISSComputationalNumberOfNodesGet(NumberOfComputationalNodes,Err)
- CALL CMISSComputationalNodeNumberGet(ComputationalNodeNumber,Err)
- !Broadcast the number of elements in the X,Y and Z directions and the number of partitions to the other computational nodes
- ! CALL MPI_BCAST(NumberGlobalXElements,1,MPI_INTEGER,0,MPI_COMM_WORLD,MPI_IERROR)
- ! CALL MPI_BCAST(NumberGlobalYElements,1,MPI_INTEGER,0,MPI_COMM_WORLD,MPI_IERROR)
- ! CALL MPI_BCAST(NumberGlobalZElements,1,MPI_INTEGER,0,MPI_COMM_WORLD,MPI_IERROR)
- ! CALL MPI_BCAST(NumberOfDomains,1,MPI_INTEGER,0,MPI_COMM_WORLD,MPI_IERROR)
- NumberOfDomains=NumberOfComputationalNodes
- !Create a CS - default is 3D rectangular cartesian CS with 0,0,0 as origin
- CALL CMISSCoordinateSystem_Initialise(CoordinateSystem,Err)
- CALL CMISSCoordinateSystem_CreateStart(CoordinateSystemUserNumber,CoordinateSystem,Err)
- CALL CMISSCoordinateSystem_TypeSet(CoordinateSystem,CMISS_COORDINATE_RECTANGULAR_CARTESIAN_TYPE,Err)
- CALL CMISSCoordinateSystem_DimensionSet(CoordinateSystem,NumberOfSpatialCoordinates,Err)
- CALL CMISSCoordinateSystem_OriginSet(CoordinateSystem,(/0.0_CMISSDP,0.0_CMISSDP,0.0_CMISSDP/),Err)
- CALL CMISSCoordinateSystem_CreateFinish(CoordinateSystem,Err)
- !Create a region and assign the CS to the region
- CALL CMISSRegion_Initialise(Region,Err)
- CALL CMISSRegion_CreateStart(RegionUserNumber,WorldRegion,Region,Err)
- CALL CMISSRegion_CoordinateSystemSet(Region,CoordinateSystem,Err)
- CALL CMISSRegion_CreateFinish(Region,Err)
- !Define basis functions - tri-linear Lagrange and tri-Quadratic Lagrange, each with collapsed variant
- !Quadratic Basis
- CALL CMISSBasis_Initialise(QuadraticBasis,Err)
- CALL CMISSBasis_CreateStart(QuadraticBasisUserNumber,QuadraticBasis,Err)
- CALL CMISSBasis_InterpolationXiSet(QuadraticBasis,(/CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION, &
- & CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION,CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION/),Err)
- CALL CMISSBasis_QuadratureNumberOfGaussXiSet(QuadraticBasis, &
- & (/CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME/),Err)
- CALL CMISSBasis_QuadratureLocalFaceGaussEvaluateSet(QuadraticBasis,.true.,Err) !Have to do this
- CALL CMISSBasis_CreateFinish(QuadraticBasis,Err)
- !Collapsed Quadratic Basis
- CALL CMISSBasis_Initialise(QuadraticCollapsedBasis,Err)
- CALL CMISSBasis_CreateStart(QuadraticCollapsedBasisUserNumber,QuadraticCollapsedBasis,Err)
- CALL CMISSBasis_TypeSet(QuadraticCollapsedBasis,CMISS_BASIS_LAGRANGE_HERMITE_TP_TYPE,Err)
- CALL CMISSBasis_NumberOfXiSet(QuadraticCollapsedBasis,NumberOfXiCoordinates,Err)
- CALL CMISSBasis_InterpolationXiSet(QuadraticCollapsedBasis,(/CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION, &
- & CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION,CMISS_BASIS_QUADRATIC_LAGRANGE_INTERPOLATION/),Err)
- CALL CMISSBasis_CollapsedXiSet(QuadraticCollapsedBasis,(/CMISS_BASIS_XI_COLLAPSED, &
- & CMISS_BASIS_COLLAPSED_AT_XI0,CMISS_BASIS_NOT_COLLAPSED/),Err)
- CALL CMISSBasis_QuadratureNumberOfGaussXiSet(QuadraticCollapsedBasis, &
- & (/CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME/),Err)
- CALL CMISSBasis_QuadratureLocalFaceGaussEvaluateSet(QuadraticCollapsedBasis,.true.,Err) !Have to do this
- CALL CMISSBasis_CreateFinish(QuadraticCollapsedBasis,Err)
- !Linear Basis
- CALL CMISSBasis_Initialise(LinearBasis,Err)
- CALL CMISSBasis_CreateStart(LinearBasisUserNumber,LinearBasis,Err)
- CALL CMISSBasis_QuadratureNumberOfGaussXiSet(LinearBasis, &
- & (/CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME/),Err)
- CALL CMISSBasis_QuadratureLocalFaceGaussEvaluateSet(LinearBasis,.true.,Err) !Have to do this (unused) due to field_interp setup
- CALL CMISSBasis_CreateFinish(LinearBasis,Err)
- !Collapsed Linear Basis
- CALL CMISSBasis_Initialise(LinearCollapsedBasis,Err)
- CALL CMISSBasis_CreateStart(LinearCollapsedBasisUserNumber,LinearCollapsedBasis,Err)
- CALL CMISSBasis_TypeSet(LinearCollapsedBasis,CMISS_BASIS_LAGRANGE_HERMITE_TP_TYPE,Err)
- CALL CMISSBasis_NumberOfXiSet(LinearCollapsedBasis,NumberOfXiCoordinates,Err)
- CALL CMISSBasis_InterpolationXiSet(LinearCollapsedBasis,(/CMISS_BASIS_LINEAR_LAGRANGE_INTERPOLATION, &
- & CMISS_BASIS_LINEAR_LAGRANGE_INTERPOLATION,CMISS_BASIS_LINEAR_LAGRANGE_INTERPOLATION/),Err)
- CALL CMISSBasis_CollapsedXiSet(LinearCollapsedBasis,(/CMISS_BASIS_XI_COLLAPSED,CMISS_BASIS_COLLAPSED_AT_XI0, &
- & CMISS_BASIS_NOT_COLLAPSED/),Err)
- CALL CMISSBasis_QuadratureNumberOfGaussXiSet(LinearCollapsedBasis, &
- & (/CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME,CMISS_BASIS_MID_QUADRATURE_SCHEME/),Err)
- CALL CMISSBasis_QuadratureLocalFaceGaussEvaluateSet(LinearCollapsedBasis,.true.,Err) !Have to do this (unused) due to field_interp setup
- CALL CMISSBasis_CreateFinish(LinearCollapsedBasis,Err)
- !Start the creation of a generated ellipsoid mesh
- CALL CMISSGeneratedMesh_Initialise(GeneratedMesh,Err)
- CALL CMISSGeneratedMesh_CreateStart(GeneratedMeshUserNumber,Region,GeneratedMesh,Err)
- !Set up an ellipsoid mesh
- CALL CMISSGeneratedMesh_TypeSet(GeneratedMesh,CMISS_GENERATED_MESH_ELLIPSOID_MESH_TYPE,Err)
- !Set the quadratic and linear bases
- CALL CMISSGeneratedMesh_BasisSet(GeneratedMesh,[QuadraticBasis,QuadraticCollapsedBasis,LinearBasis,LinearCollapsedBasis],Err)
- !Define the mesh on the region
- CALL CMISSGeneratedMesh_ExtentSet(GeneratedMesh,(/LONG_AXIS,SHORT_AXIS,WALL_THICKNESS,CUTOFF_ANGLE/),Err)
- CALL CMISSGeneratedMesh_NumberOfElementsSet(GeneratedMesh,(/NumberGlobalXElements,NumberGlobalYElements, &
- & NumberGlobalZElements/),Err)
-
- !Finish the creation of a generated mesh in the region
- CALL CMISSMesh_Initialise(Mesh,Err)
- CALL CMISSGeneratedMesh_CreateFinish(GeneratedMesh,MeshUserNumber,Mesh,Err)
- !Create a decomposition
- CALL CMISSDecomposition_Initialise(Decomposition,Err)
- CALL CMISSDecomposition_CreateStart(DecompositionUserNumber,Mesh,Decomposition,Err)
- CALL CMISSDecomposition_TypeSet(Decomposition,CMISS_DECOMPOSITION_CALCULATED_TYPE,Err)
- CALL CMISSDecomposition_NumberOfDomainsSet(Decomposition,NumberOfDomains,Err)
- CALL CMISSDecomposition_CalculateFacesSet(Decomposition,.TRUE.,Err)
- CALL CMISSDecomposition_CreateFinish(Decomposition,Err)
- !Create a field to put the geometry (default is geometry)
- CALL CMISSField_Initialise(GeometricField,Err)
- CALL CMISSField_CreateStart(FieldGeometryUserNumber,Region,GeometricField,Err)
- CALL CMISSField_MeshDecompositionSet(GeometricField,Decomposition,Err)
- CALL CMISSField_TypeSet(GeometricField,CMISS_FIELD_GEOMETRIC_TYPE,Err)
- CALL CMISSField_NumberOfVariablesSet(GeometricField,FieldGeometryNumberOfVariables,Err)
- CALL CMISSField_NumberOfComponentsSet(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,FieldGeometryNumberOfComponents,Err)
- CALL CMISSField_ComponentMeshComponentSet(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,1,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,2,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,3,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_CreateFinish(GeometricField,Err)
- !Update the geometric field parameters
- CALL CMISSGeneratedMesh_GeometricParametersCalculate(GeneratedMesh,GeometricField,Err)
- !Create a fibre field and attach it to the geometric field
- CALL CMISSField_Initialise(FibreField,Err)
- CALL CMISSField_CreateStart(FieldFibreUserNumber,Region,FibreField,Err)
- CALL CMISSField_TypeSet(FibreField,CMISS_FIELD_FIBRE_TYPE,Err)
- CALL CMISSField_MeshDecompositionSet(FibreField,Decomposition,Err)
- CALL CMISSField_GeometricFieldSet(FibreField,GeometricField,Err)
- CALL CMISSField_NumberOfVariablesSet(FibreField,FieldFibreNumberOfVariables,Err)
- CALL CMISSField_NumberOfComponentsSet(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,FieldFibreNumberOfComponents,Err)
- CALL CMISSField_ComponentMeshComponentSet(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,1,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,2,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,3,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_CreateFinish(FibreField,Err)
- !Set Fibre directions (this block is parallel-untested)
- node_idx=0
- !This is valid only for quadratic basis functions
- TOTAL_NUMBER_NODES_XI(1)=NumberGlobalXElements*2
- TOTAL_NUMBER_NODES_XI(2)=NumberGlobalYElements*2+1
- TOTAL_NUMBER_NODES_XI(3)=NumberGlobalZElements*2+1
-
- XI2delta=(PI-CUTOFF_ANGLE)/(TOTAL_NUMBER_NODES_XI(2)-1)
- XI3=0
- XI3delta=(1.0)/(TOTAL_NUMBER_NODES_XI(3)-1)
- zero=0
- DO k=1, TOTAL_NUMBER_NODES_XI(3)
- !Apex nodes
- j=1
- i=1
- node_idx=node_idx+1
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,node_idx,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- FibreFieldAngle=(/zero,zero,zero/)
- DO component_idx=1,FieldFibreNumberOfComponents
- CALL CMISSField_ParameterSetUpdateNode(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1, &
- & DerivativeUserNumber, &
- & node_idx,component_idx,FibreFieldAngle(component_idx),Err)
- ENDDO
- ENDIF
- theta=atan(FIBRE_SLOPE_CHANGE*XI3+FIBRE_SLOPE_INTERSECTION)
- DO j=2, TOTAL_NUMBER_NODES_XI(2)
- nu=PI-XI2delta*(j-1)
- omega=PI/2+cos(2*nu)*atan(SHEET_SLOPE_BASE_ENDO)*(-2*XI3+1)
- DO i=1, TOTAL_NUMBER_NODES_XI(1)
- node_idx=node_idx+1
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,node_idx,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- FibreFieldAngle=(/theta,zero,omega/)
- DO component_idx=1,FieldFibreNumberOfComponents
- CALL CMISSField_ParameterSetUpdateNode(FibreField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE, &
- & 1,DerivativeUserNumber, node_idx,component_idx,FibreFieldAngle(component_idx),Err)
- ENDDO
- ENDIF
- ENDDO
- ENDDO
- XI3=XI3+XI3delta
- ENDDO
- !Create a material field and attach it to the geometric field
- CALL CMISSField_Initialise(MaterialField,Err)
- CALL CMISSField_CreateStart(FieldMaterialUserNumber,Region,MaterialField,Err)
- CALL CMISSField_TypeSet(MaterialField,CMISS_FIELD_MATERIAL_TYPE,Err)
- CALL CMISSField_MeshDecompositionSet(MaterialField,Decomposition,Err)
- CALL CMISSField_GeometricFieldSet(MaterialField,GeometricField,Err)
- CALL CMISSField_NumberOfVariablesSet(MaterialField,FieldMaterialNumberOfVariables,Err)
- CALL CMISSField_NumberOfComponentsSet(MaterialField,CMISS_FIELD_U_VARIABLE_TYPE,FieldMaterialNumberOfComponents,Err)
- CALL CMISSField_ComponentInterpolationSet(MaterialField,CMISS_FIELD_U_VARIABLE_TYPE,1,CMISS_FIELD_CONSTANT_INTERPOLATION,Err)
- CALL CMISSField_ComponentInterpolationSet(MaterialField,CMISS_FIELD_U_VARIABLE_TYPE,2,CMISS_FIELD_CONSTANT_INTERPOLATION,Err)
- CALL CMISSField_CreateFinish(MaterialField,Err)
- !Set Mooney-Rivlin constants c10 and c01 to 2.0 and 6.0 respectively.
- CALL CMISSField_ComponentValuesInitialise(MaterialField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1,2.0_CMISSDP,Err)
- CALL CMISSField_ComponentValuesInitialise(MaterialField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,2,6.0_CMISSDP,Err)
- !Create the equations_set
- CALL CMISSField_Initialise(EquationsSetField,Err)
- CALL CMISSEquationsSet_Initialise(EquationsSet,Err)
- CALL CMISSEquationsSet_CreateStart(EquationSetUserNumber,Region,FibreField,CMISS_EQUATIONS_SET_ELASTICITY_CLASS, &
- & CMISS_EQUATIONS_SET_FINITE_ELASTICITY_TYPE,CMISS_EQUATIONS_SET_NO_SUBTYPE,EquationsSetFieldUserNumber,&
- & EquationsSetField,EquationsSet,Err)
- ! CMISS_EQUATIONS_SET_ORTHOTROPIC_MATERIAL_COSTA_SUBTYPE
- CALL CMISSEquationsSet_CreateFinish(EquationsSet,Err)
- !Create the dependent field with 2 variables and 4 components (3 displacement, 1 pressure)
- CALL CMISSField_Initialise(DependentField,Err)
- CALL CMISSField_CreateStart(FieldDependentUserNumber,Region,DependentField,Err)
- CALL CMISSField_TypeSet(DependentField,CMISS_FIELD_GENERAL_TYPE,Err)
- CALL CMISSField_MeshDecompositionSet(DependentField,Decomposition,Err)
- CALL CMISSField_GeometricFieldSet(DependentField,GeometricField,Err)
- CALL CMISSField_DependentTypeSet(DependentField,CMISS_FIELD_DEPENDENT_TYPE,Err)
- CALL CMISSField_NumberOfVariablesSet(DependentField,FieldDependentNumberOfVariables,Err)
- CALL CMISSField_NumberOfComponentsSet(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,FieldDependentNumberOfComponents,Err)
- CALL CMISSField_NumberOfComponentsSet(DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,FieldDependentNumberOfComponents,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,1,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,2,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,3,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,4,LinearMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,1,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,2,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,3,QuadraticMeshComponentNumber,Err)
- CALL CMISSField_ComponentMeshComponentSet(DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,4,LinearMeshComponentNumber,Err)
- CALL CMISSField_ScalingTypeSet(DependentField,CMISS_FIELD_UNIT_SCALING,Err)
- CALL CMISSField_CreateFinish(DependentField,Err)
- CALL CMISSEquationsSet_DependentCreateStart(EquationsSet,FieldDependentUserNumber,DependentField,Err)
- CALL CMISSEquationsSet_DependentCreateFinish(EquationsSet,Err)
- CALL CMISSEquationsSet_MaterialsCreateStart(EquationsSet,FieldMaterialUserNumber,MaterialField,Err)
- CALL CMISSEquationsSet_MaterialsCreateFinish(EquationsSet,Err)
- !Create the equations set equations
- CALL CMISSEquations_Initialise(Equations,Err)
- CALL CMISSEquationsSet_EquationsCreateStart(EquationsSet,Equations,Err)
- CALL CMISSEquations_SparsityTypeSet(Equations,CMISS_EQUATIONS_SPARSE_MATRICES,Err)
- CALL CMISSEquations_OutputTypeSet(Equations,CMISS_EQUATIONS_NO_OUTPUT,Err)
- CALL CMISSEquationsSet_EquationsCreateFinish(EquationsSet,Err)
- !Initialise dependent field from undeformed geometry and displacement bcs and set hydrostatic pressure
- CALL CMISSField_ParametersToFieldParametersComponentCopy(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE, &
- & 1,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1,Err)
- CALL CMISSField_ParametersToFieldParametersComponentCopy(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE, &
- & 2,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,2,Err)
- CALL CMISSField_ParametersToFieldParametersComponentCopy(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE, &
- & 3,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,3,Err)
- CALL CMISSField_ComponentValuesInitialise(DependentField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,4, &
- & -14.0_CMISSDP, &
- & Err)
- !Define the problem
- CALL CMISSProblem_Initialise(Problem,Err)
- CALL CMISSProblem_CreateStart(ProblemUserNumber,Problem,Err)
- CALL CMISSProblem_SpecificationSet(Problem,CMISS_PROBLEM_ELASTICITY_CLASS,CMISS_PROBLEM_FINITE_ELASTICITY_TYPE, &
- & CMISS_PROBLEM_NO_SUBTYPE,Err)
- CALL CMISSProblem_CreateFinish(Problem,Err)
- !Create the problem control loop
- CALL CMISSProblem_ControlLoopCreateStart(Problem,Err)
- CALL CMISSProblem_ControlLoopCreateFinish(Problem,Err)
- !Create the problem solvers
- CALL CMISSSolver_Initialise(Solver,Err)
- CALL CMISSSolver_Initialise(LinearSolver,Err)
- CALL CMISSProblem_SolversCreateStart(Problem,Err)
- CALL CMISSProblem_SolverGet(Problem,CMISS_CONTROL_LOOP_NODE,1,Solver,Err)
- CALL CMISSSolver_OutputTypeSet(Solver,CMISS_SOLVER_PROGRESS_OUTPUT,Err)
- !CALL CMISSSolver_NewtonJacobianCalculationTypeSet(Solver,CMISS_SOLVER_NEWTON_JACOBIAN_FD_CALCULATED,Err)
- CALL CMISSSolver_NewtonJacobianCalculationTypeSet(Solver,CMISS_SOLVER_NEWTON_JACOBIAN_EQUATIONS_CALCULATED,Err)
- CALL CMISSSolver_NewtonLinearSolverGet(Solver,LinearSolver,Err)
- CALL CMISSSolver_LinearTypeSet(LinearSolver,CMISS_SOLVER_LINEAR_DIRECT_SOLVE_TYPE,Err)
- CALL CMISSProblem_SolversCreateFinish(Problem,Err)
- !Create the problem solver equations
- CALL CMISSSolver_Initialise(Solver,Err)
- CALL CMISSSolverEquations_Initialise(SolverEquations,Err)
- CALL CMISSProblem_SolverEquationsCreateStart(Problem,Err)
- CALL CMISSProblem_SolverGet(Problem,CMISS_CONTROL_LOOP_NODE,1,Solver,Err)
- CALL CMISSSolver_SolverEquationsGet(Solver,SolverEquations,Err)
- CALL CMISSSolverEquations_SparsityTypeSet(SolverEquations,CMISS_SOLVER_SPARSE_MATRICES,Err)
- CALL CMISSSolverEquations_EquationsSetAdd(SolverEquations,EquationsSet,EquationsSetIndex,Err)
- CALL CMISSProblem_SolverEquationsCreateFinish(Problem,Err)
- !Prescribe boundary conditions (absolute nodal parameters)
- CALL CMISSBoundaryConditions_Initialise(BoundaryConditions,Err)
- CALL CMISSSolverEquations_BoundaryConditionsCreateStart(SolverEquations,BoundaryConditions,Err)
- !Grab the list of nodes on inner, outer and top surfaces
- CALL CMISSGeneratedMesh_SurfaceGet(GeneratedMesh,CMISS_GENERATED_MESH_ELLIPSOID_TOP_SURFACE,TopSurfaceNodes,TopNormalXi,Err)
- CALL CMISSGeneratedMesh_SurfaceGet(GeneratedMesh,CMISS_GENERATED_MESH_ELLIPSOID_INNER_SURFACE,InnerSurfaceNodes,InnerNormalXi,Err)
- CALL CMISSGeneratedMesh_SurfaceGet(GeneratedMesh,CMISS_GENERATED_MESH_ELLIPSOID_OUTER_SURFACE,OuterSurfaceNodes,OuterNormalXi,Err)
- ! ASSIGN BOUNDARY CONDITIONS
- !Fix base of the ellipsoid in z direction
- DO NN=1,SIZE(TopSurfaceNodes,1)
- NODE=TopSurfaceNodes(NN)
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,NODE,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- CALL CMISSField_ParameterSetGetNode(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1,1,NODE,3, &
- & ZCoord, &
- & Err)
- CALL CMISSBoundaryConditions_SetNode(BoundaryConditions,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,1,1,NODE,3, &
- & CMISS_BOUNDARY_CONDITION_FIXED,ZCoord,Err)
- ENDIF
- ENDDO
- !Apply inner surface pressure
- !NOTE: Surface pressure goes into pressure_values_set_type of the DELUDELN type
- DO NN=1,SIZE(InnerSurfaceNodes,1)
- NODE=InnerSurfaceNodes(NN)
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,NODE,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- CALL CMISSBoundaryConditions_SetNode(BoundaryConditions,DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,1,1,NODE, &
- & ABS(InnerNormalXi), &
- & CMISS_BOUNDARY_CONDITION_PRESSURE,INNER_PRESSURE,Err)
- ENDIF
- ENDDO
- !Apply outer surface pressure
- DO NN=1,SIZE(OuterSurfaceNodes,1)
- NODE=OuterSurfaceNodes(NN)
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,NODE,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- CALL CMISSBoundaryConditions_SetNode(BoundaryConditions,DependentField,CMISS_FIELD_DELUDELN_VARIABLE_TYPE,1,1,NODE, &
- & ABS(OuterNormalXi), &
- & CMISS_BOUNDARY_CONDITION_PRESSURE,OUTER_PRESSURE,Err)
- ENDIF
- ENDDO
- !Fix more nodes at the base to stop free body motion
- X_FIXED=.FALSE.
- Y_FIXED=.FALSE.
- DO NN=1,SIZE(TopSurfaceNodes,1)
- NODE=TopSurfaceNodes(NN)
- CALL CMISSDecomposition_NodeDomainGet(Decomposition,NODE,1,NodeDomain,Err)
- IF(NodeDomain==ComputationalNodeNumber) THEN
- CALL CMISSField_ParameterSetGetNode(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1,1,NODE,1, &
- & XCoord, &
- & Err)
- CALL CMISSField_ParameterSetGetNode(GeometricField,CMISS_FIELD_U_VARIABLE_TYPE,CMISS_FIELD_VALUES_SET_TYPE,1,1,NODE,2, &
- & YCoord, &
- & Err)
- IF(ABS(XCoord)<1.0E-6_CMISSDP) THEN
- CALL CMISSBoundaryConditions_SetNode(BoundaryConditions,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,1,1,NODE,1, &
- & CMISS_BOUNDARY_CONDITION_FIXED,XCoord,Err)
- WRITE(*,*) "FIXING NODE",NODE,"IN X DIRECTION"
- X_FIXED=.TRUE.
- ENDIF
- IF(ABS(YCoord)<1.0E-6_CMISSDP) THEN
- CALL CMISSBoundaryConditions_SetNode(BoundaryConditions,DependentField,CMISS_FIELD_U_VARIABLE_TYPE,1,1,NODE,2, &
- & CMISS_BOUNDARY_CONDITION_FIXED,YCoord,Err)
- WRITE(*,*) "FIXING NODE",NODE,"IN Y DIRECTION"
- Y_FIXED=.TRUE.
- ENDIF
- ENDIF
- ENDDO
- CALL MPI_REDUCE(X_FIXED,X_OKAY,1,MPI_LOGICAL,MPI_LOR,0,MPI_COMM_WORLD,MPI_IERROR)
- CALL MPI_REDUCE(Y_FIXED,Y_OKAY,1,MPI_LOGICAL,MPI_LOR,0,MPI_COMM_WORLD,MPI_IERROR)
- IF(ComputationalNodeNumber==0) THEN
- IF(.NOT.(X_OKAY.AND.Y_OKAY)) THEN
- WRITE(*,*) "Free body motion could not be prevented!"
- CALL CMISSFinalise(Err)
- STOP
- ENDIF
- ENDIF
- CALL CMISSSolverEquations_BoundaryConditionsCreateFinish(SolverEquations,Err)
- !Solve problem
- CALL CMISSProblem_Solve(Problem,Err)
- !Output solution
- CALL CMISSFields_Initialise(Fields,Err)
- CALL CMISSFields_Create(Region,Fields,Err)
- CALL CMISSFields_NodesExport(Fields,"QuadraticEllipsoid","FORTRAN",Err)
- CALL CMISSFields_ElementsExport(Fields,"QuadraticEllipsoid","FORTRAN",Err)
- CALL CMISSFields_Finalise(Fields,Err)
- CALL CMISSFinalise(Err)
- WRITE(*,'(A)') "Program successfully completed."
- STOP
- END PROGRAM QUADRATICELLIPSOIDEEXAMPLE