/working/auteur.extended/NAMESPACE

 1useDynLib(auteur.extended)
 2
 3export(
 4add.transparency,
 5adjustrate,
 6adjustvalue,
 7assess.lnR,
 8assignroot,
 9bm.lik.fn,
10branchcol.plot,
11calibrate.jumpsize,
12choose.one,
13cleanup.files,
14collect.nodes,
15compare.rates,
16determine.accepted.proposal,
17edgelabels.rj,
18find.relatives,
19fit.continuous,
20generate.error.message,
21generate.log,
22generate.starting.point,
23get.ancestor.of.node,
24get.ancestors.of.node,
25get.desc.of.node,
26get.descendants.of.node,
27get.epochs,
28get.times,
29hdr,
30infer.y,
31intercalate.samples,
32is.root,
33nearest.pair,
34parlogger,
35pathlengths,
36pool.rjmcmcsamples,
37prepare.data,
38prepare.ouchdata,
39prunelastsplit,
40ptpois,
41oumat,
42ouweights,
43ouch.ou.lik.fn,
44ou.lik.fn,
45randomization.test,
46rjmcmc.bm,
47rjmcmc.ou,
48rtpois,
49shifts.plot,
50splitormerge,
51splitrate,
52splitvalue,
53summarize.run,
54table.print,
55trace.plot,
56tracer,
57tune.rate,
58tune.value,
59ultrametricize,
60updatevcv,
61vmat,
62withinrange	
63)
64
65#importFrom( utils, capture.output )