/matlab_tools/Converted/kvsmoothseg.m
Objective C | 207 lines | 204 code | 3 blank | 0 comment | 58 complexity | f03c7a3e031fa43d6170fa8ba82177ec MD5 | raw file
Possible License(s): BSD-3-Clause
- %kvsmoothseg 'Smooth Segmentation'
- % This MatLab function was automatically generated by a converter (KhorosToMatLab) from the Khoros vsmoothseg.pane file
- %
- % Parameters:
- % InputFile: i1 'Input Image #1', required: 'first input image'
- % InputFile: i2 'Input Image #2', required: 'second input image'
- % InputFile: str1 'Struct Element 1', required: 'Structuring Element'
- % InputFile: str2 'Struct Element 2', required: 'Structuring Element'
- % InputFile: str3 'Struct Element 3', required: 'Structuring Element'
- % OutputFile: o 'Output Image ', required: 'resulting output image'
- %
- % Example: o = kvsmoothseg({i1, i2, str1, str2, str3}, {'i1','';'i2','';'str1','';'str2','';'str3','';'o',''})
- %
- % Khoros helpfile follows below:
- %
- % PROGRAM
- % vsmoothseg - Smooth Segmentation
- %
- % DESCRIPTION
- % .I vsmoothseg
- % will do the smooth segmentation of an input image by a marker image and a set of structuring elements.
- %
- % The two input images must be of the same size and have the same
- % number of data bands. The input
- % images may be of the same or different data types. If the input
- % images are of different data types, then all input images will be
- % upcast to the highest input image data type. The output
- % image data type will be the same as that of the highest data type
- % of the input images.
- %
- %
- %
- % EXAMPLES
- % vsmoothseg -i1 img1.xv -i2 img2.xv -str1 b272.str -str2 b273.str -str3 b274.str -o outimage.xv
- %
- % Will do the smooth segmentation of image 1 "img1.xv" by the marker "img2.xv", using the structuring sets b272.str, b273.str and b274.str, with the resulting image written to "outimage.xv".
- %
- % Some useful structuring elements:
- %
- % 1 1 1 1 1 1 0 0 0
- % 1 1 1 0 0 0 0 0 0
- % 1 1 1 0 0 0 1 1 1
- %
- % Note: the first struct. el. is used for erosions, the others are used for exoskeletons by thickening.
- %
- % "SEE ALSO"
- %
- % RESTRICTIONS
- % .I vsmoothseg
- % can be defined for all data types supported by Khoros, but at the moment it has been implemented just for the bit and unsigned char types.
- % The structuring elements are subsets of the 3x3 matrix and the origin is always at the center of this matrix.
- %
- % REFERENCES
- %
- % COPYRIGHT
- % Copyright (C) 1993-1997 Junior Barrera, Roberto Lotufo. All rights reserved.
- %
- function varargout = kvsmoothseg(varargin)
- if nargin ==0
- Inputs={};arglist={'',''};
- elseif nargin ==1
- Inputs=varargin{1};arglist={'',''};
- elseif nargin ==2
- Inputs=varargin{1}; arglist=varargin{2};
- else error('Usage: [out1,..] = kvsmoothseg(Inputs,arglist).');
- end
- if size(arglist,2)~=2
- error('arglist must be of form {''ParameterTag1'',value1;''ParameterTag2'',value2}')
- end
- narglist={'i1', '__input';'i2', '__input';'str1', '__input';'str2', '__input';'str3', '__input';'o', '__output'};
- maxval={0,0,0,0,0,0};
- minval={0,0,0,0,0,0};
- istoggle=[0,0,0,0,0,0];
- was_set=istoggle * 0;
- paramtype={'InputFile','InputFile','InputFile','InputFile','InputFile','OutputFile'};
- % identify the input arrays and assign them to the arguments as stated by the user
- if ~iscell(Inputs)
- Inputs = {Inputs};
- end
- NumReqOutputs=1; nextinput=1; nextoutput=1;
- for ii=1:size(arglist,1)
- wasmatched=0;
- for jj=1:size(narglist,1)
- if strcmp(arglist{ii,1},narglist{jj,1}) % a given argument was matched to the possible arguments
- wasmatched = 1;
- was_set(jj) = 1;
- if strcmp(narglist{jj,2}, '__input')
- if (nextinput > length(Inputs))
- error(['Input ' narglist{jj,1} ' has no corresponding input!']);
- end
- narglist{jj,2} = 'OK_in';
- nextinput = nextinput + 1;
- elseif strcmp(narglist{jj,2}, '__output')
- if (nextoutput > nargout)
- error(['Output nr. ' narglist{jj,1} ' is not present in the assignment list of outputs !']);
- end
- if (isempty(arglist{ii,2}))
- narglist{jj,2} = 'OK_out';
- else
- narglist{jj,2} = arglist{ii,2};
- end
- nextoutput = nextoutput + 1;
- if (minval{jj} == 0)
- NumReqOutputs = NumReqOutputs - 1;
- end
- elseif isstr(arglist{ii,2})
- narglist{jj,2} = arglist{ii,2};
- else
- if strcmp(paramtype{jj}, 'Integer') & (round(arglist{ii,2}) ~= arglist{ii,2})
- error(['Argument ' arglist{ii,1} ' is of integer type but non-integer number ' arglist{ii,2} ' was supplied']);
- end
- if (minval{jj} ~= 0 | maxval{jj} ~= 0)
- if (minval{jj} == 1 & maxval{jj} == 1 & arglist{ii,2} < 0)
- error(['Argument ' arglist{ii,1} ' must be bigger or equal to zero!']);
- elseif (minval{jj} == -1 & maxval{jj} == -1 & arglist{ii,2} > 0)
- error(['Argument ' arglist{ii,1} ' must be smaller or equal to zero!']);
- elseif (minval{jj} == 2 & maxval{jj} == 2 & arglist{ii,2} <= 0)
- error(['Argument ' arglist{ii,1} ' must be bigger than zero!']);
- elseif (minval{jj} == -2 & maxval{jj} == -2 & arglist{ii,2} >= 0)
- error(['Argument ' arglist{ii,1} ' must be smaller than zero!']);
- elseif (minval{jj} ~= maxval{jj} & arglist{ii,2} < minval{jj})
- error(['Argument ' arglist{ii,1} ' must be bigger than ' num2str(minval{jj})]);
- elseif (minval{jj} ~= maxval{jj} & arglist{ii,2} > maxval{jj})
- error(['Argument ' arglist{ii,1} ' must be smaller than ' num2str(maxval{jj})]);
- end
- end
- end
- if ~strcmp(narglist{jj,2},'OK_out') & ~strcmp(narglist{jj,2},'OK_in')
- narglist{jj,2} = arglist{ii,2};
- end
- end
- end
- if (wasmatched == 0 & ~strcmp(arglist{ii,1},''))
- error(['Argument ' arglist{ii,1} ' is not a valid argument for this function']);
- end
- end
- % match the remaining inputs/outputs to the unused arguments and test for missing required inputs
- for jj=1:size(narglist,1)
- if strcmp(paramtype{jj}, 'Toggle')
- if (narglist{jj,2} ==0)
- narglist{jj,1} = '';
- end;
- narglist{jj,2} = '';
- end;
- if ~strcmp(narglist{jj,2},'__input') && ~strcmp(narglist{jj,2},'__output') && istoggle(jj) && ~ was_set(jj)
- narglist{jj,1} = '';
- narglist{jj,2} = '';
- end;
- if strcmp(narglist{jj,2}, '__input')
- if (minval{jj} == 0) % meaning this input is required
- if (nextinput > size(Inputs))
- error(['Required input ' narglist{jj,1} ' has no corresponding input in the list!']);
- else
- narglist{jj,2} = 'OK_in';
- nextinput = nextinput + 1;
- end
- else % this is an optional input
- if (nextinput <= length(Inputs))
- narglist{jj,2} = 'OK_in';
- nextinput = nextinput + 1;
- else
- narglist{jj,1} = '';
- narglist{jj,2} = '';
- end;
- end;
- else
- if strcmp(narglist{jj,2}, '__output')
- if (minval{jj} == 0) % this is a required output
- if (nextoutput > nargout & nargout > 1)
- error(['Required output ' narglist{jj,1} ' is not stated in the assignment list!']);
- else
- narglist{jj,2} = 'OK_out';
- nextoutput = nextoutput + 1;
- NumReqOutputs = NumReqOutputs-1;
- end
- else % this is an optional output
- if (nargout - nextoutput >= NumReqOutputs)
- narglist{jj,2} = 'OK_out';
- nextoutput = nextoutput + 1;
- else
- narglist{jj,1} = '';
- narglist{jj,2} = '';
- end;
- end
- end
- end
- end
- if nargout
- varargout = cell(1,nargout);
- else
- varargout = cell(1,1);
- end
- global KhorosRoot
- if exist('KhorosRoot') && ~isempty(KhorosRoot)
- w=['"' KhorosRoot];
- else
- if ispc
- w='"C:\Program Files\dip\khorosBin\';
- else
- [s,w] = system('which cantata');
- w=['"' w(1:end-8)];
- end
- end
- [varargout{:}]=callKhoros([w 'vsmoothseg" '],Inputs,narglist);