/test-data/extract_genomic_dna_out1.fasta

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 456 lines · 456 code · 0 blank · 0 comment · 0 complexity · c3fd44d8b67a92d770bee00fca303601 MD5 · raw file

  1. >hg17_chr1_147962192_147962580_-
  2. ACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTG
  3. GACCCGTCAACCCCCCTGCTCGCTGCTCACGTACCTTCATCACTTTTAGT
  4. GATGATGCAACTTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAAAGT
  5. CCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATACCGGG
  6. ACCCTGTTACAGACATACCCTATGCCACTGCTCGAGCCTTCAAGATCATT
  7. CGTGAGGCTTACAAGAAGTACATTACTGCCCATGGACTGCCGCCCACTGC
  8. CTCAGCCCTGGGCCCCGGCCCGCCACCTCCTGAGCCCCTCCCTGGCTCTG
  9. GGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAAATGA
  10. >hg17_chr1_147984545_147984630_+
  11. ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTT
  12. TGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
  13. >hg17_chr1_148078400_148078582_-
  14. GTTCTCAGCTTCCTTGCTTCCATGGCTCCAGCACCATTCGAAACCTCAAA
  15. GAGAGGTTCCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCTGGTGGA
  16. GCAGATGGTGGATGGCAGTATGCGGTCTATCACCACCAAACTCTATGACG
  17. GCTTCCAGTACCTCACCAACGGCATCATGTGA
  18. >hg17_chr1_148185136_148185276_+
  19. ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGC
  20. CCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATC
  21. CGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
  22. >hg17_chr10_55251623_55253124_-
  23. TCTTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCT
  24. CAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACT
  25. ATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAGAGCAACAA
  26. ACTGAAGTCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAA
  27. GTGCCCATAATCCCCTTTATAAGGAAAACATAAGTCAAGTATCAACAAAT
  28. TCAGACATTTCACAGAGAACAGATTTTGTAGACCCATTTTCACCCAAAAT
  29. ACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGC
  30. TGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCA
  31. AATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA
  32. AGCTGAAAATGAAAACACTGGAATCTGTACAAACAAAAGAGGTAGCAGCA
  33. ATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATA
  34. AGGCAAGGTGAAACACTGATGATAGAAGGAACAGAACAGTTGAAATCTCT
  35. CTCTTCAGACTCTTCATTTTGCTTTCCCAGGCCTCACTTCTCATTCTCCA
  36. CTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTC
  37. ATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTTCAAGGCCTTG
  38. TGTTTTACATTCTTCACTCTCTAGGAGAGAGACACCTATTTGTATGTTAC
  39. CTATTGAAACCGAAAGAAATATTTTTGAAAATTTTGCCCATCCACCAAAC
  40. ATCTCTCCTTCTGCCTGtccccttccccctcctcctcctatttctcctcc
  41. ttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctc
  42. ctttttctcttttttgtcctcctccctctcctccttctatccctcttcct
  43. cttcctcctcctACATTTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCC
  44. AACAccacctcttctacctccatttccaactcctcttcctccaccacctc
  45. cttctattccttgccctccacctccttcAGCTTCATTTCTGTCCACAGAG
  46. TGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA
  47. GAAAATTAAGTCCTCTATGACACAGCTATCAACAACGACAGTGTGTAAAA
  48. CAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACACGTTAAAAACTTA
  49. GCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGAAAAAAA
  50. CTATCTACGCACAAATGTTTCAGAACTTCAAACTATGTGCCCTTCAGAAG
  51. TAACAAATATGGAAATCACATCTGAACAAAACAAGGGGAGTTTGAACAAT
  52. ATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTA
  53. A
  54. >hg17_chr11_116124407_116124501_-
  55. ATCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGG
  56. CAGTGGAGGAACTTGCCTACAAATGGAGTGTTGAGGATATGTAA
  57. >hg17_chr11_116206508_116206563_+
  58. ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTC
  59. TGCCC
  60. >hg17_chr11_116211733_116212337_-
  61. CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGC
  62. TGCGCGAACAGCTCGGCCCTGTGACCCAGGAGTTCTGGGATAACCTGGAA
  63. AAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGT
  64. GAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGG
  65. AGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTC
  66. CAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCC
  67. ACTGGGCGAGGAGATGCGCGACCGCGCGCGCGCCCATGTGGACGCGCTGC
  68. GCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCG
  69. CGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCA
  70. CGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCG
  71. CGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTCAAG
  72. GTCAGCTTCCTGAGCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCA
  73. GTGA
  74. >hg17_chr11_1812377_1812407_+
  75. ATGCTCCACCTGCATGGCTGGCAAACCATG
  76. >hg17_chr12_38440094_38440321_-
  77. GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATC
  78. TATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATC
  79. ACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAG
  80. GGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCT
  81. GACAATGATGCTTCTGATGTGGAATAA
  82. >hg17_chr13_112381694_112381953_+
  83. ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTA
  84. CCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGA
  85. AGATGGACCCGGCAGGTCTGGAGGGAGGCCCCCGTGATGAATCCCGTGAT
  86. GAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTG
  87. CCTGACCTATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTAC
  88. AGCTGCCAG
  89. >hg17_chr14_98710240_98712285_-
  90. GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTC
  91. AACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCG
  92. CATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCA
  93. CCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATG
  94. AATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCC
  95. CATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCGGGCACGC
  96. CGCCTCTCTTCAGTCCCCCGCCGCGCCACCACCTGGACCCGCACCGCCTC
  97. AGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCG
  98. AGTCATGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCT
  99. CGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTG
  100. TCCCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCC
  101. CAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCC
  102. CTGGCGGCACGCCGCCCCCGCAGCCGCCAGCCAAGAGCAAGTCGTGCGAG
  103. TTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCG
  104. CAGTCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGT
  105. GCTCGCAGGCCAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAG
  106. GCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTC
  107. CCCCGAGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCG
  108. ACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCg
  109. gaggaggaggacgaggaggaggaggaggaggaggaggagCTGCTACTGGA
  110. GAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCC
  111. GCAACCGCGAGAACGGCGGTGGTGGGGTgcccggggtcccgggcgcgggg
  112. ggcggcgcggccAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCAA
  113. GGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCC
  114. TGGCCGACAAGCAGAAGCGCGGCGCCTTCCTGAAGCGTGCggcgggcggc
  115. ggggacgcgggcgacgacgacgacgcgggcggctgcggggacgcgggcgc
  116. gggcggcgcggtcaacgggcgcgggggcggCTTCGCGCCAGGCACCGAGC
  117. CCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGG
  118. CTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCC
  119. GCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTGGTGG
  120. GCTACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACG
  121. GACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAA
  122. CGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGCC
  123. TCTCGGGCCGCAGCGGCACGGCCAGCGGAGGCAGCACCCCGCACCTgggc
  124. ggcccgggccccgggcggcccAGCTCCAAGGAGGGCCGCCGCAGCGACAC
  125. GTGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTTGACGGTGC
  126. ACCGGCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAAC
  127. TACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGG
  128. GCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCA
  129. GCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCAC
  130. TTGCTGACTAACGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAA
  131. >hg17_chr15_41486872_41487060_-
  132. ATATTGCTTTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATGCCCA
  133. GCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACA
  134. AGAGTGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGC
  135. AGCATCCAAAATATAAACACGATTATGTTTCTCACTAA
  136. >hg17_chr15_41673708_41673857_+
  137. ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCT
  138. CCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGAC
  139. CGGAACCTGTACGAGCTGCCAGTGAACGACGGAGGCTGTATCCCCCGAG
  140. >hg17_chr15_41679161_41679250_-
  141. GTCGAAGTACAGCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCC
  142. CTGGTATTGACTATCAGCTTCCTTGGCCACCTGCTATGA
  143. >hg17_chr15_41826029_41826196_+
  144. ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGCTGCTTCTTGC
  145. CGCGGCCCGCCTCGCCGCTGCCTCCGACGTGCTAGAACTCACGGACGACA
  146. ACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTC
  147. GAGTTCTTCGCCCCCTG
  148. >hg17_chr16_142908_143003_+
  149. ATGTCTCTGACCAAGACTGAGAGGACCATCATTGTGTCCATGTGGGCCAA
  150. GATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGGAGAG
  151. >hg17_chr16_179963_180135_-
  152. GTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAG
  153. AGCGACGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCAC
  154. CGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGA
  155. CCGAAGTGCGAAATACAAGTAA
  156. >hg17_chr16_244413_244681_+
  157. ATGTTGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGA
  158. AGAAAGAAAATCGCAGGAAAATCTGGGAAATCCATCAAAAAATGAGGATA
  159. ACGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCG
  160. GCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTC
  161. ATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCGAATGTGGAGGA
  162. TAGACTACAGTGCCGCTG
  163. >hg17_chr16_259268_259383_-
  164. CGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCAC
  165. TCCTTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGA
  166. GATGGGGTGGCCTAG
  167. >hg17_chr18_23786114_23786321_-
  168. GGCCTTAAAGCGGCTGACAATGACCCCACAGCTCCACCATATGACTCCCT
  169. GTTAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGAGCT
  170. CCCTTAATTCCTCAAGTAGTGGTGGTGAGCAGGACTATGATTACCTGAAC
  171. GACTGGGGGCCACGGTTCAAGAAACTTGCTGACATGTATGGTGGAGGTGA
  172. TGACTGA
  173. >hg17_chr18_59406881_59407046_+
  174. ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAA
  175. AGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCA
  176. TCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCT
  177. TCCCAGTTGGAGGAG
  178. >hg17_chr18_59455932_59456337_-
  179. CTTGAAGAGAAACTCACTGCTGAGAAATTGATGGAATGGACAAGTTTGCA
  180. GAATATGAGAGAGACATGTGTCGATTTACACTTACCTCGGTTCAAAATGG
  181. AAGAGAGCTATGACCTCAAGGACACGTTGAGAACCATGGGAATGGTGAAT
  182. ATCTTCAATGGGGATGCAGACCTCTCAGGCATGACCTGGAGCCACGGTCT
  183. CTCAGTATCTAAAGTCCTACACAAGGCCTTTGTGGAGGTCACTGAGGAGG
  184. GAGTGGAAGCTGCAGCTGCCACCGCTGTAGTAGTAGTCGAATTATCATCT
  185. CCTTCAACTAATGAAGAGTTCTGTTGTAATCACCCTTTCCTATTCTTCAT
  186. AAGGCAAAATAAGACCAACAGCATCCTCTTCTATGGCAGATTCTCATCCC
  187. CATAG
  188. >hg17_chr18_59600586_59600754_+
  189. ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAG
  190. AGAGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGA
  191. GCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCC
  192. CTCTCTCAGATTGATAAG
  193. >hg17_chr19_59068595_59069564_+
  194. ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACGACGTCATC
  195. TTCGGGCCTGGGGTCCCCCATGATCGTGGGGTCCCCTCGGGCCCTGACAC
  196. AGCCCCTGGGTCTCCTTCGCCTGCTGCAGCTGGTGTCTACCTGCGTGGCC
  197. TTCTCGCTGGTGGCTAGCGTGGGCGCCTGGACGGGGTCCATGGGCAACTG
  198. GTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCA
  199. TCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAAC
  200. TTCCCCATCACCTTCGCCTGCTATGCGGCCCTCTTCTGCCTCTCGGCCTC
  201. CATCATCTACCCCACCACCTATGTCCAGTTCCTGTCCCACGGCCGTTCGC
  202. GGGACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCT
  203. TACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGG
  204. CTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTG
  205. CCTGCATCATCTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAG
  206. CCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGC
  207. GGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCA
  208. TCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTC
  209. TATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTA
  210. TGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGCCATG
  211. CCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACG
  212. GCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCT
  213. GGTTTTTGTCAAGGTCTAA
  214. >hg17_chr19_59236026_59236146_-
  215. ACGGCAGACCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCT
  216. GTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAAT
  217. ATGCGGCACTGAAAGTGTAG
  218. >hg17_chr19_59297998_59298008_+
  219. ATGGCTGCGA
  220. >hg17_chr19_59302168_59302288_-
  221. ATTAAGGTTGAGGAAGACTTTGGCTTTGAAGCAGATGAGGCCCTGGATTC
  222. CAGTTGGGTTTCTCGGGGTCCAGACAAACTGCTGCCCTACCCGACCCTGG
  223. CCAGCCCAGCCTCTGACTGA
  224. >hg17_chr2_118288583_118288668_+
  225. ATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAA
  226. CCTCAAATTGCGGCAGCGGAACCTAAAGTTTCAGG
  227. >hg17_chr2_118394148_118394202_-
  228. GAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTC
  229. CTGA
  230. >hg17_chr2_220190202_220190242_+
  231. ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
  232. >hg17_chr2_220229609_220230869_-
  233. TGGGAGATCCAGAATACCAGCCATCTGGCCGTTGATGGGGACCAGGCAGC
  234. TGCTTGGCCCGTGGGTATTCCAGCACCATCCCGCCCGGCCTCCCGCTTTG
  235. AGGTGCTGCGCTGGGACTACTTCACGGAGCAGCACGCTTTCTCCTGCGCC
  236. GATGGCTCACCCCGCTGCCCACTGCGTGGGGCTGACCGGGCTGATGTGGC
  237. CGATGTTCTGGGGACAGCTCTAGAGGAGCTGAACCGCCGCTACCACCCGG
  238. CCTTGCGGCTCCAGAAGCAGCAGCTGGTGAATGGCTACCGACGCTTTGAT
  239. CCGGCCCGGGGTATGGAATACACGCTGGACTTGCAGCTGGAGGCACTGAC
  240. CCCCCAGGGAGGCCGCCGGCCCCTCACTCGCCGAGTGCAGCTGCTCCGGC
  241. CGCTGAGCCGCGTGGAGATCTTGCCTGTGCCCTATGTCACTGAGGCCTCA
  242. CGTCTCACTGTGCTGCTGCCTCTAGCTGCGGCTGAGCGTGACCTGGCCCC
  243. TGGCTTCTTGGAGGCCTTTGCCACTGCAGCACTGGAGCCTGGTGATGCTG
  244. CGGCAGCCCTGACCCTGCTGCTACTGTATGAGCCGCGCCAGGCCCAGCGC
  245. GTGGCCCATGCAGATGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCT
  246. GGAGCGGCGTTTCCCCGGTGCCCGGGTGCCATGGCTCAGTGTGCAGACAG
  247. CCGCACCCTCACCACTGCGCCTCATGGATCTACTCTCCAAGAAGCACCCG
  248. CTGGACACACTGTTCCTGCTGGCCGGGCCAGACACGGTGCTCACGCCTGA
  249. CTTCCTGAACCGCTGCCGCATGCATGCCATCTCCGGCTGGCAGGCCTTCT
  250. TTCCCATGCATTTCCAAGCCTTCCACCCAGCTGTGGCCCCACCACAAGGG
  251. CCTGGGCCCCCAGAGCTGGGCCGTGACACTGGCCGCTTTGATCGCCAGGC
  252. AGCCAGCGAGGCCTGCTTCTACAACTCCGACTATGTGGCAGCCCGTGGGC
  253. GCCTGGCGGCAGCCTCAGAACAAGAAGAGGAGCTGCTGGAGAGCCTGGAT
  254. GTGTACGAGCTGTTCCTCCACTTCTCCAGTCTGCATGTGCTGCGGGCGGT
  255. GGAGCCGGCGCTGCTGCAGCGCTACCGGGCCCAGACGTGCAGCGCGAGGC
  256. TCAGTGAGGACCTGTACCACCGCTGCCTCCAGAGCGTGCTTGAGGGCCTC
  257. GGCTCCCGAACCCAGCTGGCCATGCTACTCTTTGAACAGGAGCAGGGCAA
  258. CAGCACCTGA
  259. >hg17_chr20_33330413_33330423_-
  260. CCTCACCTGA
  261. >hg17_chr20_33513606_33513792_+
  262. ATGGAGACAAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTCACTGCA
  263. GCTGGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGA
  264. ATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAG
  265. AGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
  266. >hg17_chr20_33579500_33579527_-
  267. ATTTTGGAAGATGGTCTGGTTCCCTAG
  268. >hg17_chr20_33593260_33593348_+
  269. ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTT
  270. GGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
  271. >hg17_chr21_32707032_32707192_+
  272. ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCA
  273. GCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCC
  274. TCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACC
  275. GACTTCTCTG
  276. >hg17_chr21_32869641_32870022_-
  277. ATGGAGCGCCCTCTCATCTGGCACCTTCCTGGCCTCTTTCCCAGGCCCCA
  278. GTTCTGTCCATGCAGCTGTGGGTGCTTCCTGCATTGCGGGTCTCACGGGG
  279. AGGAGACGAGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATCTTCACG
  280. TCGCTGCCAGCAAATGACCACAGCAGCTTCACGACCTCTGCAGGAACCTA
  281. TCTTGGTAAAGAAACGGGGCCTATGTGGTGGCCGAGCCTCAGGTGTGGCC
  282. GAGCTTCAGGTGTGGCCCTTATGCACAGCACAGCCCAAGCCTGTGGGCAC
  283. CACTCGCCCTGGGCTGCCTGGCACCTGGACTCCTTCCCATCCTTGGCCGA
  284. GGTCTGCGTGGCCCTTCAGGGCCGAATCTGA
  285. >hg17_chr21_33321040_33322012_+
  286. ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCC
  287. CGATGACCTTTTTCTGCCGGCCCGGAGTAAGGGCAGCAGCGGCAGCGCCT
  288. TCACTGGGGGCACCGTGTCCTCGTCCACCCCGAGTGACTGCCCGCCGGAG
  289. CTGAGCGCCGAGCTGCGCGGCGCTATGGGCTCTGCGGGCGCGCATCCTGG
  290. GGACAAGCTAGGAGGCAGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGT
  291. CGTCTACGTCGTCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAA
  292. ATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGA
  293. GCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTCCGCGAGG
  294. TCATGCCGTACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCC
  295. ACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGA
  296. GGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGGCCACCACGCTGGCT
  297. TCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTCCGCGCCCCTGCCCGCC
  298. GCCACCGCGCACCCGGCAGCAGCAGCGCACGCCGCACATCACCCCGCGGT
  299. GCACCACCCCATCctgccgcccgccgccgcagcggctgctgccgccgctg
  300. cagccgcggctgTGTCCAGCGCCTCTCTGCCCGGATCCGGGCTGCCGTCG
  301. GTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCTgc
  302. cgcggccgccccgctggggggcgggggcggcggcAGTGGGGCGAGCGGGG
  303. GCTTCCAGCACTGGGGCGGCATGCCCTGCCCCTGCAGCATGTGCCAGGTG
  304. CCGCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCCGCG
  305. CCTCACCTCCGACGCCAAGTGA
  306. >hg17_chr21_33744994_33745040_-
  307. CACTCTGATCTACAAATTTGGAAGAACCGAAGAGCTATGGACCTGA
  308. >hg17_chr22_30120223_30120265_+
  309. ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
  310. >hg17_chr22_30160419_30160661_-
  311. TTCTGCATCCTCCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG
  312. ACAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATGCACTC
  313. CCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTG
  314. CCAAATGGTTTGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCC
  315. GCCAAAGTTATCAGTGTAGATGAATTGGAATACCGACAGTGA
  316. >hg17_chr22_30665273_30665360_+
  317. ATGGGGGACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGC
  318. GGAGCGCTACGACGACATGGCCTCCGCTATGAAGGCG
  319. >hg17_chr22_30939054_30939266_-
  320. ATTATCCTGAGAAATCACGTGGATGCCTCAAGAAAGCTTATGACTTGTTC
  321. TGCGGTTTGCAGAAGGGACCCAAGCTAACCAAGGAGGAGGAGGAAGCCTT
  322. GAGCAAGAAGCTCACAGACACGTCTGAGAGGCCCTCGTGGAGGACAATAG
  323. TGAACATCAACGCCATCCTCCTCCTGGCTGTGGTGGTCTTTATTCACGGC
  324. TACTATGCCTGA
  325. >hg17_chr5_131424298_131424460_+
  326. ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGG
  327. ACTCCAAGCTCCCATGACCCAGACAACGCCCTTGAAGACAAGCTGGGTTA
  328. ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCT
  329. TTGCCTTTGCTG
  330. >hg17_chr5_131556601_131556672_-
  331. TCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGT
  332. GGATCAACAGAAGTTGACTGA
  333. >hg17_chr5_131621326_131621419_+
  334. ATGCCCCATTCCGTGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCT
  335. GGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
  336. >hg17_chr5_131847541_131847666_-
  337. GGGATATTGGGCTGAGTCTACAGCGTGTCTTCACAGATCTGAAGAACATG
  338. GATGCCACCTGGCTGGACAGCCTGCTGACCCCAGTCCGGTTGCCCTCCAT
  339. CCAGGCCATTCCCTGTGCACCGTAG
  340. >hg17_chr6_108299600_108299744_-
  341. TTGGAAGTTCATGAGGCTAAGCCTGTGCCAGAAAATCACCCACAGTGGGA
  342. TACAGCAATAGAGGGGGATGAAGACCAGGAGGACAGTGAGGGCTTTGAAG
  343. ATAGCTTTGAGGAAGAAGAGGAGGAAGAAGAAGATGATGACTAA
  344. >hg17_chr6_108594662_108594687_+
  345. ATGAGCAAGCCAGCCGGATCAACAA
  346. >hg17_chr6_108640045_108640151_-
  347. GGTCGCTGGTCATCCTCTGGCACAGAACGAACGTTGTCTTCACATGTTTT
  348. TACAAGATGAAATAATAGATAAAAGCTATACTCCATCTAAAATAAGACAT
  349. GCCTGA
  350. >hg17_chr6_108722976_108723115_+
  351. ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAG
  352. CCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCG
  353. CTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
  354. >hg17_chr7_113660517_113660685_+
  355. ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCA
  356. AAATGGAATGAGCACTCTAAGCAGCCAATTAGATGCTGGCAGCAGAGATG
  357. GAAGATCAAGTGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTG
  358. CATCTGCAACAACAGCAG
  359. >hg17_chr7_116512159_116512389_-
  360. GCTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATG
  361. GACAGCTGTGAAGTCATGTGCTGTGGGAGAGGCTACGACACCTCCCATGT
  362. CACCCGGATGACCAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGTGC
  363. GCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCCC
  364. AAGAACGCTGACTGGACAACCGCTACATGA
  365. >hg17_chr7_116714099_116714152_+
  366. ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTT
  367. CAG
  368. >hg17_chr7_116945541_116945787_-
  369. GAGGTCAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGCAACAGTAA
  370. ATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTC
  371. CTAGAAGTAAAGTCACCCAGTGTTCCCAGAACACCAAAAGAAGCAGCAGC
  372. AGCAGTAATACAAGGCAAATAGAAATCAACAACAACTCAAAAGAAGTGAA
  373. TTGGAACTTACACAAAAATGAACACCTAGAAAAACCTAACAAATAG
  374. >hg17_chr8_118881131_118881317_-
  375. ACTTCTCGGGCTTCCCGTTGGGCTGACCCTGACCACTTTGCCCAGCGACA
  376. GAGCTGCATGAATACGTTTGCCAGCTGGTTTGGCTACATGCCGCTGATCC
  377. ACTCTCAGATGAGGCTCGACCCCGTCCTCTTTAAAGACCAGGTCTCTATT
  378. TTGAGGAAGAAATACCGAGACATTGAGCGACTTTGA
  379. >hg17_chr9_128764156_128764189_+
  380. ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
  381. >hg17_chr9_128787519_128789136_-
  382. ATGACCCGAGAGTGCCCATCTCCGGCCCCGGGGCCTGGGGCTCCGCTGAG
  383. TGGATCGGTGCTGGCAGAGGCGGCAGTAGTGTTTGCAGTGGTGCTGAGCA
  384. TCCACGCAACCGTATGGGACCGATACTCGTGGTGCGCCGTGGCCCTCGCA
  385. GTGCAGGCCTTCTACGTCCAATACAAGTGGGACCGGCTGCTACAGCAGGG
  386. AAGCGCCGTCTTCCAGTTCCGAATGTCCGCAAACAGTGGCCTATTGCCCG
  387. CCTCCATGGTCATGCCTTTGCTTGGACTAGTCATGAAGGAGCGGTGCCAG
  388. ACTGCTGGGAACCCGTTCTTTGAGCGTTTTGGCATTGTGGTGGCAGCCAC
  389. TGGCATGGCAGTGGCCCTCTTCTCATCAGTGTTGGCGCTCGGCATCACTC
  390. GCCCAGTGCCAACCAACACTTGTGTCATCTTGGGCTTGGCTGGAGGTGTT
  391. ATCATTTATATCATGAAGCACTCGTTGAGCGTGGGGGAGGTGATCGAAGT
  392. CCTGGAAGTCCTTCTGATCTTCGTTTATCTCAACATGATCCTGCTGTACC
  393. TGCTGCCCCGCTGCTTCACCCCTGGTGAGGCACTGCTGGTATTGGGTGGC
  394. ATTAGCTTTGTCCTCAACCAGCTCATCAAGCGCTCTCTGACACTGGTGGA
  395. AAGTCAGGGGGACCCAGTGGACTTCTTCCTGCTGGTGGTGGTAGTAGGGA
  396. TGGTACTCATGGGCATTTTCTTCAGCACTCTGTTTGTCTTCATGGACTCA
  397. GGCACCTGGGCCTCCTCCATCTTCTTCCACCTCATGACCTGTGTGCTGAG
  398. CCTTGGTGTGGTCCTACCCTGGCTGCACCGGCTCATCCGCAGGAATCCCC
  399. TGCTCTGGCTTCTTCAGTTTCTCTTCCAGACAGACACCCGCATCTACCTC
  400. CTAGCCTATTGGTCTCTGCTGGCCACCTTGGCCTGCCTGGTGGTGCTGTA
  401. CCAGAATGCCAAGCGGTCATCTTCCGAGTCCAAGAAGCACCAGGCCCCCA
  402. CCATCGCCCGAAAGTATTTCCACCTCATTGTGGTAGCCACCTACATCCCA
  403. GGTATCATCTTTGACCGGCCACTGCTCTATGTAGCCGCCACTGTATGCCT
  404. GGCGGTCTTCATCTTCCTGGAGTATGTGCGCTACTTCCGCATCAAGCCTT
  405. TGGGTCACACTCTACGGAGCTTCCTGTCCCTTTTTCTGGATGAACGAGAC
  406. AGTGGACCACTCATTCTGACACACATCTACCTGCTCCTGGGCATGTCTCT
  407. TCCCATCTGGCTGATCCCCAGACCCTGCACACAGAAGGGTAGCCTGGGAG
  408. GAGCCAGGGCCCTCGTCCCCTATGCCGGTGTCCTGGCTGTGGGTGTGGGT
  409. GATACTGTGGCCTCCATCTTCGGTAGCACCATGGGGGAGATCCGCTGGCC
  410. TGGAACCAAAAAGACTTTTGAGGGGACCATGACATCTATATTTGCGCAGA
  411. TCATTTCTGTAGCTCTGATCTTAATCTTTGACAGTGGAGTGGACCTAAAC
  412. TACAGTTATGCTTGGATTTTGGGGTCCATCAGCACTGTGTCCCTCCTGGA
  413. AGCATACACTACACAGATAGACAATCTCCTTCTGCCTCTCTACCTCCTGA
  414. TATTGCTGATGGCCTAG
  415. >hg17_chr9_128882427_128882523_+
  416. ATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCAT
  417. GACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
  418. >hg17_chr9_128937229_128937445_-
  419. GTCCCTGCCAAGACAGACTGTGTCATGTTCTTCGGGCCCGTGGTCCCCGA
  420. CGGCTACGGTGTCTGCTATAACCCCATGGAGGCCCACATCAACTTCTCCC
  421. TGTCGGCCTACAACAGCTGCGCGGAGACCAACGCCGCCCGCCTGGCGCAT
  422. TACCTGGAGAAGGCGCTCCTGGACATGCGTGCCCTGCTGCAGAGCCACCC
  423. CCGGGCCAAGCTCTGA
  424. >hg17_chrX_122745047_122745924_+
  425. ATGACTTTTAACAGTTTTGAAGGATCTAAAACTTGTGTACCTGCAGACAT
  426. CAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTG
  427. CTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACACTGGCACGAGCA
  428. GGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCA
  429. TGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACA
  430. GGAAAGTATCCCCAAATTGCAGATTTATCAACGGCTTTTATCTTGAAAAT
  431. AGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGT
  432. TGAAAACTATCTGGGAAGCAGAGATCATTTTGCCTTAGACAGGCCATCTG
  433. AGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCA
  434. GACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATT
  435. AAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGT
  436. TAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGC
  437. TTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTG
  438. GTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGA
  439. ATCTTAATATTCGAAGTGAATCTGATGCTGTGAGTTCTGATAGGAATTTC
  440. CCAAATTCAACAAATCTTCCAAGAAATCCATCCATGGCAGATTATGAAGC
  441. ACGGATCTTTACTTTTGGGACATGGATATACTCAGTTAACAAGGAGCAGC
  442. TTGCAAGAGCTGGATTTTATGCTTTAG
  443. >hg17_chrX_152648964_152649196_-
  444. TGACAACGAGGAGAAGGCCTTTGGCAGCAGCCAGCCATCGCTCAACGGGG
  445. ACATCAAGCCCCTGGGCAGTGACGACAGCCTGGCCGATTATGGGGGCAGC
  446. GTGGATGTTCAGTTCAACGAGGATGGTTCGTTCATTGGCCAGTACAGTGG
  447. CAAGAAGGAGAAGGAGGCGGCAGGGGGCAATGACAGCTCAGGGGCCACTT
  448. CCCCCATCAACCCTGCCGTGGCCCTAGAATAG
  449. >hg17_chrX_152691446_152691471_+
  450. ATGCTCATGGCGTCCACCACTTCCG
  451. >hg17_chrX_152694029_152694263_-
  452. GCTGTGGCACAGAACATGGACTCTGTGTTTAAGGAGCTCTTGGGAAAGAC
  453. CTCTGTCCGCCAGGGCCTTGGGCCAGCATCTACCACCTCTCCCAGTCCTG
  454. GGCCCCGAAGCCCAAAGGCCCCGCCCAGCAGCCGCCTGGGCAGGAACAAA
  455. GGCTTCTCCCGGGGCCCTGGGGCCCCAGCCTCACCCTCAGCTTCCCACCC
  456. CCAGGGCCTAGACACGACCCCCAAGCCACACTGA