/test-data/interval2maf_3from28way.maf

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 1301 lines · 1062 code · 239 blank · 0 comment · 0 complexity · e4eab2f09e065f86d610bebc7df3609a MD5 · raw file

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  1. ##maf version=1
    2. 

  2. a score=378218.0
    3. 

  3. s hg18.chr1     99287304 223 - 247249719 TCCTCTATGCAAGAGTACACTAGCTATTCTGTGGACAGGAGCCAGACAATGTGAGCTGTACATAAGAATTATTTTTGCAGTGTCAAAAGCCATTCTAGGTGGAATCCAAATCACCACTTGCCTTAGACAGACACCCCCTCAGCTTCACTGCAGGTCCAGAGTCAGCCGAGGCCAGAGAGAGAACCACCAGGAGTGGAAGCAACACTCTCTAGGTTCTCTGCAC 
    4. 

  4. s panTro2.chr1 101234886 223 - 229974691 TCCTCTATGCAAGAGTACACTAGCTATTCTATGGACAGGAGCCAGACAATGTGAGCTGTACATAAGAATTATTTTTGCAGTGTCAAAAGCCATTCTAGGTGGAATCCAAATCACCACTTGCCTTAGACAGACACCCCCTCAGCTTCACTGCAGGTCCAGAGTCAGCCGAGGCCACAGAGAGAACCACCAGGAGTGGAAGCAACACTCTCTAGGTTCTCTGCAC 
    5. 

  5. 

  6. a score=10640.0
    7. 

  7. s hg18.chr1     99287270 34 - 247249719 GCTGTAAGATGCCATGTATTTTGTGATTCTACAA 
    8. 

  8. s panTro2.chr1 101234852 34 - 229974691 GCTGTAAGATGCCATGTATTTTGTGATTCTACAA 
    9. 

  9. 

  10. a score=43023.0
    11. 

  11. s hg18.chr1     99287229 41 - 247249719 AGGGCCCAGAGGATCTGGCCATGTTCTCATGGCATCATTGA 
    12. 

  12. s panTro2.chr1 101234811 41 - 229974691 AGGGCCCAGAGGATCTGGCCATGTTCTCATGGCATCATTGA 
    13. 

  13. 

  14. a score=120618.0
    15. 

  15. s hg18.chr1     99287139 90 - 247249719 TCCTTGAAAGGGAAAGACTCTAAAACTTTTCTCTGAATTATGGCCCTGCCACCCCAGCTGGGTTTTTCTCTCAAAGGGAGACAGTAATGA 
    16. 

  16. s panTro2.chr1 101234721 90 - 229974691 TCCTTGAAAGGGAAAGACTCTAAAACTTTTCTCTGAATTACGGCCCTGCCACCCCAGCTGGGTTTTTCTCTCAAAGGGAGACAGTAATGA 
    17. 

  17. 

  18. a score=39239.0
    19. 

  19. s hg18.chr1    147984545 50 + 247249719 AGAAAAACTTTAGTGGAAACAACCAGTACTTAAAGACCATTTTATGAGGC 
    20. 

  20. s panTro2.chr1 128764240 50 + 229974691 AGAAAAACTTTAGTGGAAACAACCAGTACTTAAAGACCATTTTATGAGGC 
    21. 

  21. i panTro2.chr1                          C 0 C 0                                            
    22. 

  22. 

  23. a score=93901.0
    24. 

  24. s hg18.chr1    147984595 35 + 247249719 TGTCATTTACGTATTATCTCTTTTGCTGTTTTTGT 
    25. 

  25. s panTro2.chr1 128764290 35 + 229974691 TGTCATTTACATATTATCTCTTTTGCTGTTTTTGT 
    26. 

  26. i panTro2.chr1                          C 0 C 0                             
    27. 

  27. 

  28. a score=-5867.0
    29. 

  29. s hg18.chr1     99171300 19 - 247249719 CGTGGGGAGAACTGCGCTG 
    30. 

  30. s panTro2.chr1 101114588 19 - 229974691 CGGGGGGAGAACTGCGCTG 
    31. 

  31. 

  32. a score=-4312.0
    33. 

  33. s hg18.chr1     99171258 42 - 247249719 GGGAAATGACCACCTCGGCCTCGCCGGGGTTCTGCGGACAAA 
    34. 

  34. s panTro2.chr1 101114546 42 - 229974691 GGGAAATGACCACCTCGGCCTCGCCGGGGTTCTGCGGGCAAA 
    35. 

  35. 

  36. a score=-5717.0
    37. 

  37. s hg18.chr1     99171247 11 - 247249719 CCGGCTAGGGA 
    38. 

  38. s panTro2.chr1 101114535 11 - 229974691 CCGGCTAGGGA 
    39. 

  39. 

  40. a score=-26975.0
    41. 

  41. s hg18.chr1     99171193 54 - 247249719 GAGCGCCACACGCCCGTGCTTCGCGCCCAAACCGGCCTCACCCGGCGCGGCCAT 
    42. 

  42. s panTro2.chr1 101114481 54 - 229974691 GAGCGCCACACGCCCGTGCTTCGCGCCCAAACCGGCCTCACCCGGCGCGGCCAT 
    43. 

  43. 

  44. a score=-60785.0
    45. 

  45. s hg18.chr1     99171137 56 - 247249719 ACTAGGGGGACGCTCAGGGCTCGCGGTCCTGAGCGCGGCTGGCCTTTGCGGAAGTG 
    46. 

  46. s panTro2.chr1 101114425 56 - 229974691 ACTAGGGGGACGCTCAGGGCTCGCGGTCCTGAGCGCGGCTGGCCTTTGCGGAAGTG 
    47. 

  47. 

  48. a score=151634.0
    49. 

  49. s hg18.chr1    148185136 140 + 247249719 acgtctgtaatcccagctactcgtgaggctgatgcaggagaatcacttgaacctgggaagtggaggttgctgtgagccaagattgtgccactgcatttcagcctggctgacagagcaagacttcctctgaaaaaaaaaaa 
    50. 

  50. s panTro2.chr1 128947445 139 + 229974691 acgtctgtaatcccagctactcgtgaggctaatgcaggagaatcacttgaacctgggaagtggaggttgctgtgagccaagattgtgccactgcatttcagcctgggtgacagagcaagacttcctctg-gaaaaaaaaa 
    51. 

  51. i panTro2.chr1                           C 0 C 0                                                                                                                                      
    52. 

  52. 

  53. a score=518150.0
    54. 

  54. s hg18.chr10    80123058 56 - 135374737 ACAATATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTAA 
    55. 

  55. s mm8.chr10     74075614 56 + 129959148 TTAGAGTTGTTGAGGGAATTGACGTGCAACCTCACAGTCAATCAACATCTTTGTAA 
    56. 

  56. s panTro2.chr10 82310642 56 - 135001995 ACAATATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTAA 
    57. 

  57. 

  58. a score=200210.0
    59. 

  59. s hg18.chr10    80122998 60 - 135374737 TGTGCCCTTCAGAAGTAACAAATATGGAAATCACATCTGAACAAAACAAGGGGAGTTTGA 
    60. 

  60. s panTro2.chr10 82310582 60 - 135001995 TGTGCCCTTCGGAAGTAACAAATATGGAAATCACATTTGAACAAAACAAGGAGAATTTGA 
    61. 

  61. s mm8.chr10     74075554 60 + 129959148 TTTGCCCTGCAGAGAAAACAGGCATGAAAATCACACATGACCAGAGCCAGGAAACGTTGG 
    62. 

  62. 

  63. a score=136193.0
    64. 

  64. s hg18.chr10    80122957 41 - 135374737 AAAAAACTATCTACGCACAAATGTTTCAGAACTTCAAACTA 
    65. 

  65. s panTro2.chr10 82310541 41 - 135001995 AAAAAACTATCTACGCACAAATGTTTCAGAACTTCAAACTA 
    66. 

  66. s mm8.chr10     74075513 41 + 129959148 AAAAAACTGCCCACCTGCAGATCCCTCAAAACTACACACGT 
    67. 

  67. 

  68. a score=1023171.0
    69. 

  69. s hg18.chr10    80122882 75 - 135374737 AAAAGGCATCCTCAGACACGTTAAAAACTTAGCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGA 
    70. 

  70. s panTro2.chr10 82310466 75 - 135001995 AAAAGGCATCCTCAGACATGTTAAAAACTTAGCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGA 
    71. 

  71. s mm8.chr10     74075438 75 + 129959148 AAAAGGGATCCTCAGACATGTGAAAAACTTGGCAGAGCTCGAGAAATCAGTGTCTAACATGTACAGTCACATAGA 
    72. 

  72. 

  73. a score=-29743.0
    74. 

  74. s hg18.chr10    80122851 31 - 135374737 CAGTGTGTAAAACAGACCCTCAGAGAGAACC 
    75. 

  75. s panTro2.chr10 82310435 31 - 135001995 CAGTGTGTAAAACAGACCCTCAGAGAGAACC 
    76. 

  76. s mm8.chr10     74075407 31 + 129959148 CGCAGTGGGGGGCAGAACCCCACAGACATCC 
    77. 

  77. 

  78. a score=121521.0
    79. 

  79. s hg18.chr10    80122808 43 - 135374737 GCCGAGAAAATTAAGTCCTCTATGACACAGCTATCAACAACGA 
    80. 

  80. s panTro2.chr10 82310392 43 - 135001995 GCCGAGAAAATTAAGTCCTCTATGACACAGCTATCAACAACGA 
    81. 

  81. s mm8.chr10     74075364 40 + 129959148 GCCAGAGAAACCA---CGTCTACGACACAGCCACCAGCATCCA 
    82. 

  82. 

  83. a score=101339.0
    84. 

  84. s hg18.chr10    80122748 60 - 135374737 TTTCTGTCCACAGAGTGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCT 
    85. 

  85. s panTro2.chr10 82310332 60 - 135001995 TTTCTGTCCACAGAGTGTGTCTGTATAACAGGTGTTGAATGCACGACCAACATGATGCCT 
    86. 

  86. s mm8.chr10     74075304 60 + 129959148 ATTCCATCCACAGACAGCATCTCTGCACCAGCTGCTAAATGCACTGCCAGTGCCACACAC 
    87. 

  87. 

  88. a score=153575.0
    89. 

  89. s hg18.chr10    80122616 132 - 135374737 cctcctcctACATTTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCCAACA------------ccacctcttctacctccatttccaactcctcttcctccaccacctccttctattccttgccctccacctccttcAGCTTCA 
    90. 

  90. s panTro2.chr10 82310207 125 - 135001995 -------ctACATTTTTTCCACTTTCCATTTCAACGTCTGGTCCCCCAACA------------ccacctcttctacctccatttccaactcctcttcctccaccacctccttctattccttgccctccacctccttcAGCTTCA 
    91. 

  91. s mm8.chr10     74075167 137 + 129959148 ----ccccacaacttgttacattttctcttcccatttctacaccccctacttcttctctacctcttcctcctccactgtcacttcctcctc---ctcctcGGCCACCAGCTCCCCGCCTCTTCCCACAGCCTCCTTCCACGTCC 
    92. 

  92. 

  93. a score=-80842.0
    94. 

  94. s hg18.chr10    80122576 40 - 135374737 ttgtcctcctccctctcctccttctatccctcttcctctt 
    95. 

  95. s panTro2.chr10 82310184 23 - 135001995 ttgtcctcctccctctcctcctt----------------- 
    96. 

  96. s mm8.chr10     74075144 23 + 129959148 cctttctccccctaaccctcctc----------------- 
    97. 

  97. 

  98. a score=15475.0
    99. 

  99. s hg18.chr10    80122507 69 - 135374737 tcctccttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctcctttttctctttt 
    100. 

  100. s mm8.chr10     74075096 48 + 129959148 tccgcctcttcctagacct---------------------cccattgcctttaccacttttcctcttcc 
    101. 

  101. s panTro2.chr10 82310115 69 - 135001995 tcctccttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctcctttttctctttt 
    102. 

  102. 

  103. a score=-32513.0
    104. 

  104. s hg18.chr10    80122465 42 - 135374737 CTCTCCTTCTGCCTGtccccttccccctcctcctcctatttc 
    105. 

  105. s mm8.chr10     74075078 18 + 129959148 CTC------------------------TGctcccctcccaca 
    106. 

  106. s panTro2.chr10 82310073 42 - 135001995 CTCTCCTTCTGCCTGtccccttcctcctccttctcctatttc 
    107. 

  107. 

  108. a score=286554.0
    109. 

  109. s hg18.chr10    80122411 54 - 135374737 ACCTATTGAAACCGAAAGAAATATTTTTGAAAATTTTGCCCATCCACCAAACAT 
    110. 

  110. s panTro2.chr10 82310019 54 - 135001995 ACCTGTTGAAACCGAAAGAAATATGTTTGAAAATTTTGCCCATCCACCAAACAT 
    111. 

  111. s mm8.chr10     74075024 54 + 129959148 AGATACAGAACCAAAAAGGAACTCTTTTGAGATCGCTCCCCATCCACCTAGCAT 
    112. 

  112. 

  113. a score=1014462.0
    114. 

  114. s hg18.chr10    80122238 173 - 135374737 CCCAGGCCTCACTTCTCATTCTCCACTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTCATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTT---CAAGGCCTTGTGTTTTACATTCTTCACTCTCTAGGAGAGAGACACCTATTTGTATGTT 
    115. 

  115. s mm8.chr10     74074848 176 + 129959148 TCTTGGTCTCACTTTTCTTTCTCAACTCTGCCAACGATTTCCAGAGCGGTGGAACTCGGGTCGGAACCTAATGTGGTCACTTCTCCCGCTGACTGCACCTTGGAACTTTCTCCTCCTCTGAGACCCCGTATTTTAAACTCCTTAAGCTCTAAGAGAGAGACTCCCACATGTGCATC 
    116. 

  116. s panTro2.chr10 82309846 173 - 135001995 CCCAGGCCTCACTTCTCATTCTCCACTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTCATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTT---CAAGGCCTTGTGTTTTAAATTCTTCACTCTCTAGGAGAGCGACACCTATTTGTATGTT 
    117. 

  117. 

  118. a score=337224.0
    119. 

  119. s hg18.chr10    80122083 155 - 135374737 GAATCTGTACAAACAAAAGAGGTAGCAGCAATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATAAGGCAAGGTGAAACACTGATGATAGAAGGAACAGAACAGTTGAAATCTCTCTCTTCAGACTCTTCATTTTGCTTT 
    120. 

  120. s panTro2.chr10 82309691 155 - 135001995 GAATCTGTACAAACAAAAGAGGTAGCAGCAATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATAAGGCAAGGTGACACACTGATTATGAAAGGAAGAGAACAGTTGAAATCTCTCTCTTCAGACTCTTCATTTTGCTTT 
    121. 

  121. s mm8.chr10     74074696 152 + 129959148 GATGCCACCCAAGCCAGAGAGGTAGCAGCAACGTTCTGCTGGCAACTGAAGATGCCCACGAGTCAGAGAA---AGAAGGGGGACACAGAGACACCCTAATCGTCCAGCAAACAGAGCAGCTGAAATCTCTGTCTTCTGGCTCTTCTTTTTCCTCC 
    122. 

  122. 

  123. a score=196272.0
    124. 

  124. s hg18.chr10    80122035 48 - 135374737 TGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAAAATGAAAACACTG 
    125. 

  125. s panTro2.chr10 82309643 48 - 135001995 TGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAAAATGAAAACACTG 
    126. 

  126. s mm8.chr10     74074648 48 + 129959148 TGGTGGAGTGGCAGATCACCAATCAGAGAGCTGAATGCGAAAGCGCCA 
    127. 

  127. 

  128. a score=267386.0
    129. 

  129. s hg18.chr10    80121994 41 - 135374737 GCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATC 
    130. 

  130. s panTro2.chr10 82309602 41 - 135001995 GCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATC 
    131. 

  131. s mm8.chr10     74074607 41 + 129959148 GCTCATGTGGAAAGCCCCAAACAGGCCAGAGACCATAGACC 
    132. 

  132. 

  133. a score=799420.0
    134. 

  134. s hg18.chr10    80121885 109 - 135374737 ATTTTGTAGACCCATTTTCACCCAAAATACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAG 
    135. 

  135. s panTro2.chr10 82309493 109 - 135001995 ATTTTGTAGACCTATTTTCACCCAAAGTACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAG 
    136. 

  136. s mm8.chr10     74074498 109 + 129959148 ATTTTGAAGAGCTGTTGGCACCCAGAACACAAGTTAAGAGTCAGTCTCTGAGGGGCCCAAGAGAAAAGATCCAGAGGGTGTGGAATCAGTCTGTGAGCTTTCCTAGGCG 
    137. 

  137. 

  138. a score=212883.0
    139. 

  139. s hg18.chr10    80121842 43 - 135374737 ATAAGTCAAGTATCAACAAATTCAGACATTTCACAGAGAACAG 
    140. 

  140. s panTro2.chr10 82309450 43 - 135001995 ATAAGTCAAGTATCAACAAATTCAGACATTTCACAGAGAACAG 
    141. 

  141. s mm8.chr10     74074455 43 + 129959148 ATAGGTCAAAGGTCAACAAACTCAGACCTTCAGCCACGAACAG 
    142. 

  142. 

  143. a score=804771.0
    144. 

  144. s hg18.chr10    80121755 87 - 135374737 AGCAACAAACTGAAGTCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAAGTGCCCATAATCCCCTTTATAAGGAAAAC 
    145. 

  145. s panTro2.chr10 82309363 87 - 135001995 AGCAACAAACTGAAGGCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAAGTGCCCATAATCCCCTTTATAAGGAAAAC 
    146. 

  146. s mm8.chr10     74074368 87 + 129959148 GAGAGCCAGCCTAACCCAGCAAGGACGTTCTCATTTGTTCCTGATGAGGATAACTTAAGTACCCATAATCCCCTTTACATGGAAAGT 
    147. 

  147. 

  148. a score=2273365.0
    149. 

  149. s hg18.chr10    80121613 142 - 135374737 TCTTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACTATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAG 
    150. 

  150. s panTro2.chr10 82309221 142 - 135001995 TATTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACTATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAG 
    151. 

  151. s mm8.chr10     74074226 142 + 129959148 TCTTTTCCTTCTCTACCATTTTGAACAAAGCAGGGGAAATAACTCAGTCCCAGAAGACAGGAGCAGTCATCGCGATGGGATGGCCTTTTCCTCCAGTACCACTGAGTCTCATGAGCCAGCTCATGTAGAGGGACCACTTAAG 
    152. 

  152. 

  153. a score=591281.0
    154. 

  154. s hg18.chr11    18327947 30 - 134452384 GCCTACAAATGGAGTGTTGAGGATATGTAA 
    155. 

  155. s mm8.chr9      46049473 30 + 124000669 GCCTACAAGTGGAGTGTGGAGGATATGTGA 
    156. 

  156. s panTro2.chr11 18640018 30 - 134204764 GCCTACAAATGGAGTGTTGAGGATATGTAA 
    157. 

  157. 

  158. a score=887677.0
    159. 

  159. s hg18.chr11    18327884 63 - 134452384 TCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGGCAGTGGAGGAACTT 
    160. 

  160. s panTro2.chr11 18639955 63 - 134204764 TCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGGCAGTGGAGGAACTT 
    161. 

  161. s mm8.chr9      46049410 63 + 124000669 TCCAATGGCTTTGAACAGAAGCGCTTTGCCAGGCTCGCCAGCAAGAAGGCTGTGGAGGAGCTT 
    162. 

  162. 

  163. a score=63327.0
    164. 

  164. s hg18.chr11    18327883 1 - 134452384 A 
    165. 

  165. s panTro2.chr11 18639954 1 - 134204764 A 
    166. 

  166. s mm8.chr9      46049409 1 + 124000669 A 
    167. 

  167. 

  168. a score=156152.0
    169. 

  169. s hg18.chr11    116206508 6 + 134452384 ATGCAG  
    170. 

  170. s mm8.chr9       78014961 6 - 124000669 ATGCAG  
    171. 

  171. i mm8.chr9                              C 0 C 0 
    172. 

  172. s panTro2.chr11 115648111 6 + 134204764 ATGCAG  
    173. 

  173. i panTro2.chr11                         C 0 C 0 
    174. 

  174. 

  175. a score=204572.0
    176. 

  176. s hg18.chr11    116206514 49 + 134452384 CCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC 
    177. 

  177. s panTro2.chr11 115648117 49 + 134204764 CCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC 
    178. 

  178. i panTro2.chr11                          C 0 C 0                                           
    179. 

  179. s mm8.chr9       78014967 49 - 124000669 CCCCGGACGCTCCTCACTGTGGCCCTCTTGGCTCTCCTGGCATCTGCCC 
    180. 

  180. i mm8.chr9                               C 0 C 0                                           
    181. 

  181. 

  182. a score=27414.0
    183. 

  183. s hg18.chr11    18240627 24 - 134452384 ACTAAGAAGCTCAACACCCAGTGA 
    184. 

  184. s panTro2.chr11 18551568 24 - 134204764 ACTAAGAAGCTCAACACCCAGTGA 
    185. 

  185. s mm8.chr9      45981373 24 + 124000669 AGCGAGACTCTGACTGCCCAGTGA 
    186. 

  186. 

  187. a score=65817.0
    188. 

  188. s hg18.chr11    18240590 37 - 134452384 CTTCAAGGTCAGCTTCCTGAGCGCTCTCGAGGAGTAC 
    189. 

  189. s panTro2.chr11 18551531 37 - 134204764 CTTCAAGGTCAGCTTCCTGAGCGCTCTCGAGGAGTAC 
    190. 

  190. s mm8.chr9      45981336 37 + 124000669 GCTTAAGACCCAAGTCCAGAGTGTGATCGACAAGGCC 
    191. 

  191. 

  192. a score=121894.0
    193. 

  193. s hg18.chr11    18240544 46 - 134452384 CCGCGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAG 
    194. 

  194. s mm8.chr9      45981290 46 + 124000669 CTGCGCTGGAGGACCTGCGCCATAGTCTGATGCCCATGCTGGAGAC 
    195. 

  195. s panTro2.chr11 18551485 46 - 134204764 CCGCGCTCGAGGACCTCCGCCAGGGCCTGCTGCCCGTGCTGGAGAG 
    196. 

  196. 

  197. a score=368735.0
    198. 

  198. s hg18.chr11    18240366 178 - 134452384 GACCGCGCGCGCGCCCATGTGGACGCGCTGCGCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCGCGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCACGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGC 
    199. 

  199. s panTro2.chr11 18551307 178 - 134204764 GACCGCGCGCGCGCCCATGTGGACGCGCTGCGCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCGCGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCACGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGC 
    200. 

  200. s mm8.chr9      45981118 172 + 124000669 GACCGCATGCGCACACACGTAGACTCTCTGCGCACACAGCTAGCGCCCCACAGCGAACAGATGCGCGAGAGCCTGGCCCAGCGCCTGGCTGAGCTCAAGA------GCAACCCTACCTTGAACGAGTACCACACCAGGGCCAAAACCCACCTGAAGACACTTGGCGAGAAAGCCAGAC 
    201. 

  201. 

  202. a score=97575.0
    203. 

  203. s hg18.chr11    18240323 43 - 134452384 CGAGCTGCAAGAGAAGCTGAGCCCACTGGGCGAGGAGATGCGC 
    204. 

  204. s panTro2.chr11 18551264 43 - 134204764 CGAGCTGCAAGAGAAGCTGAGCCCACTGGGCGAGGAGATGCGC 
    205. 

  205. s mm8.chr9      45981075 43 + 124000669 GGAGCTGCAAGGGAGACTGTCCCCTGTGGCTGAGGAATTTCGC 
    206. 

  206. 

  207. a score=580950.0
    208. 

  208. s hg18.chr11    18240123 200 - 134452384 CAGGAGTTCTGGGATAACCTGGAAAAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGTGAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGGAGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTCCAAGAGGGCGCGCGCCAGAAGCTGCA 
    209. 

  209. s panTro2.chr11 18551064 200 - 134204764 CAGGAGTTCTGGGATAACCTGGAAAAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGTGAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGGAGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCCGAGCTCCAAGAGGGCGCGCGCCAGAAGCTGCA 
    210. 

  210. s mm8.chr9      45980875 200 + 124000669 CGGGACTTCTGGGATAACCTGGAGAAAGAAACAGATTGGGTGAGACAGGAGATGAACAAGGACCTAGAGGAAGTGAAACAGAAGGTGCAGCCCTACCTGGACGAATTCCAGAAGAAATGGAAAGAGGATGTGGAGCTCTACCGCCAGAAGGTGGCGCCTCTGGGCGCCGAGCTGCAGGAGAGCGCGCGCCAGAAGCTGCA 
    211. 

  211. 

  212. a score=49052.0
    213. 

  213. s hg18.chr11    18240102 21 - 134452384 GAACAGCTCGGCCCTGTGACC 
    214. 

  214. s panTro2.chr11 18551043 21 - 134204764 GAACAGCTCGGCCCTGTGACC 
    215. 

  215. s mm8.chr9      45980854 21 + 124000669 GAACGGCTGGGCCCATTGACT 
    216. 

  216. 

  217. a score=167437.0
    218. 

  218. s hg18.chr11    18240047 55 - 134452384 CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGCTGCGC 
    219. 

  219. s panTro2.chr11 18550988 55 - 134204764 CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGCTGCGC 
    220. 

  220. s mm8.chr9      45980799 55 + 124000669 CCTGAATCTCCTGGAAAACTGGGACACTCTGGGTTCAACCGTTAGTCAGCTGCAG 
    221. 

  221. 

  222. a score=-14919.0
    223. 

  223. s hg18.chr11      1812377 30 + 134452384 ATGCTCCACCTGCATGGCTGGCAAACCATG 
    224. 

  224. s mm8.chr7      142247071 26 + 145134094 ----CCAACTGGACTACCGTGTAGAAGATG 
    225. 

  225. i mm8.chr7                               C 0 C 0                        
    226. 

  226. s panTro2.chr11   1858435 30 + 134204764 ATGCTCCACCTGTATGGCTGGCAAACCACG 
    227. 

  227. i panTro2.chr11                          C 0 C 0                        
    228. 

  228. 

  229. a score=117382.0
    230. 

  230. s hg18.chr12    93909439 1 - 132349534 A 
    231. 

  231. s panTro2.chr12 50116182 1 + 135371336 A 
    232. 

  232. s mm8.chr15     12392656 1 - 103492577 A 
    233. 

  233. 

  234. a score=2422168.0
    235. 

  235. s hg18.chr12    93909303 136 - 132349534 AAATTGAATCACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAGGGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCTGACAATGATGCTTCTGATGTGGAATA 
    236. 

  236. s panTro2.chr12 50116046 136 + 135371336 AAATTGAATCACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAGGGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCTGACAATGATGCTTCTGATGTGGAATA 
    237. 

  237. s mm8.chr15     12392520 136 - 103492577 AAATCGAATCGCTCTTTGACCACCGGCTATGTTCATGTGGCGCTGCCGACTCGGATGAAGGGAGGTACATTGAGTACATCCGCGTGAAGGGAAGCAACTATCATCTCTCCGACAACGACGCTTCTGACGTGGAGTA 
    238. 

  238. 

  239. a score=1478304.0
    240. 

  240. s hg18.chr12    93909213 90 - 132349534 GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATCTATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGG 
    241. 

  241. s panTro2.chr12 50115956 90 + 135371336 GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCGTCTACGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGG 
    242. 

  242. s mm8.chr15     12392430 90 - 103492577 GAGCATTCTTCCTCTACGCCGGATTCGCCGCTGTGGGACTGCTTTTTGTCTATGGCTGCCTCCCTGAAACCAAGGGGAAAAAATTGGAGG 
    243. 

  243. 

  244. a score=129525.0
    245. 

  245. s hg18.chr13    112381694 1 + 114142980 A       
    246. 

  246. s panTro2.chr13 114131566 1 + 115868456 A       
    247. 

  247. i panTro2.chr13                         C 0 C 0 
    248. 

  248. s mm8.chr8       12748309 1 + 132085098 A       
    249. 

  249. i mm8.chr8                              C 0 C 0 
    250. 

  250. 

  251. a score=39963.0
    252. 

  252. s hg18.chr13    112381695 121 + 114142980 TGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGA 
    253. 

  253. s panTro2.chr13 114131567 121 + 115868456 TGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGA 
    254. 

  254. i panTro2.chr13                           C 0 C 0                                                                                                                   
    255. 

  255. s mm8.chr8       12748310  91 + 132085098 TTTGTTCACCAGAGT----GTCCTGGCCTCCTGCCTATGTGGACTCATTCCCAAGG-ACCAGCCT-TGAAGGACGCA-ATGTAGGG-----CTCCATGGA------------------GGA 
    256. 

  256. i mm8.chr8                                C 0 C 0                                                                                                                   
    257. 

  257. 

  258. a score=1055.0
    259. 

  259. s hg18.chr13    112381816 44 + 114142980 GGGAGGCCCCCGTGATGAATCCCGTGATGAGCCGCCGATCCGAG 
    260. 

  260. s panTro2.chr13 114131688 44 + 115868456 GGGAGGCCCCTGTGATGAATCCCGTGATGAGCCGCTGATCCGAG 
    261. 

  261. i panTro2.chr13                          C 0 C 0                                      
    262. 

  262. s mm8.chr8       12748401 15 + 132085098 GGGAGGTCTGTGTGA----------------------------- 
    263. 

  263. i mm8.chr8                               C 0 C 0                                      
    264. 

  264. 

  265. a score=-16674.0
    266. 

  266. s hg18.chr13    112381860 93 + 114142980 CTCAGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTACAGCTGCCAG 
    267. 

  267. s panTro2.chr13 114131732 93 + 115868456 CTCGGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCACAGGAGTGCCTCAGGGAGACAGAAGCAGTTACAGCTGTCAG 
    268. 

  268. i panTro2.chr13                          C 0 C 0                                                                                        
    269. 

  269. s mm8.chr8       12748416 81 + 132085098 -----------CACTGGGACTTGCCACAGGTCAG--TGATTGTTCAGAGGTCACAGGAGTGCCACCCTCAGGCAGAGTCATCTGTCTTTTCCAG 
    270. 

  270. i mm8.chr8                               C 0 C 0                                                                                        
    271. 

  271. 

  272. a score=1627846.0
    273. 

  273. s hg18.chr14     7658261 84 - 106368585 ACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAA 
    274. 

  274. s panTro2.chr14  7807052 84 - 107349158 ACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAA 
    275. 

  275. s mm8.chr12     12099869 84 - 120463159 ACCCTGGAGAAACACATGAAAAAGTGGCACGGTGAACACTTGCTGACTAATGATGTCAAAATCGAGCAGGCTGAGAGGAGCTAA 
    276. 

  276. 

  277. a score=2813413.0
    278. 

  278. s hg18.chr14     7658104 157 - 106368585 GCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGTCTACAGC 
    279. 

  279. s panTro2.chr14  7806895 157 - 107349158 GCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGTCTACAGC 
    280. 

  280. s mm8.chr12     12099712 157 - 120463159 GAGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGTCTACAGC 
    281. 

  281. 

  282. a score=1778334.0
    283. 

  283. s hg18.chr14     7657988 116 - 106368585 CCGCACCTgggcggcccgggccccgggcggcccAGCTCCAAGGAGGGCCGCCGCAGCGACACGTGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTTGACGGTGCACCG 
    284. 

  284. s panTro2.chr14  7806779 116 - 107349158 CCGCACCTgggcggcccgggccccgggcggcccAGCTCCAAGGAGGGCCGCCGCAGCGACACGTGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTTGACGGTGCACCG 
    285. 

  285. s mm8.chr12     12099596 116 - 120463159 CCTCACCTGGGTGGTCCGGGTCCTGGGAGGCCGAGCTCCAAGGAGGGCCGCCGCAGCGACACATGTGAGTACTGCGGCAAGGTCTTCAAGAACTGTAGCAACCTGACGGTGCACCG 
    286. 

  286. 

  287. a score=448798.0
    288. 

  288. s hg18.chr14     7657957 31 - 106368585 CCGCAGCGGCACGGCCAGCGGAGGCAGCACC 
    289. 

  289. s panTro2.chr14  7806748 31 - 107349158 CCGCAGCGGCACGGCCAGCGGGGGCAGCACC 
    290. 

  290. s mm8.chr12     12099565 31 - 120463159 GCGCAGTGGCACGGCGAGCGGGGGCAGCACA 
    291. 

  291. 

  292. a score=951272.0
    293. 

  293. s hg18.chr14     7657896 61 - 106368585 AGAACGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGCCTCTCGGG 
    294. 

  294. s panTro2.chr14  7806687 61 - 107349158 AGAACGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGCCTCTCGGG 
    295. 

  295. s mm8.chr12     12099504 61 - 120463159 AGAACGGCAGCCTGCGCTTCTCAACGCCACCCGGGGACCTGCTGGACGGCGGGCTGTCCGG 
    296. 

  296. 

  297. a score=2903485.0
    298. 

  298. s hg18.chr14     7657646 250 - 106368585 GAGCCCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAG------------CGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTGGTGGGCTACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCG 
    299. 

  299. s panTro2.chr14  7806437 250 - 107349158 GAGCCCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAG------------CTCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTGGTGGGCTACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCG 
    300. 

  300. s mm8.chr12     12099242 262 - 120463159 GAGCCCTTTCCAGCTCTCTTCCCACGCAAGCCAGCACCGCTGCCCAGCCCTGGGCTCGGTGGTCCCGCGCTGCACGCGGCCAAGCGCATCAAGGTGGAGAAAGACCTGGAGCTGCCACCTGCCGCCCTCATCCCATCTGAGAACGTGTACTCGCAGTGGCTCGTGGGCTACGCAGCATCGCGCCACTTCATGAAGGACCCATTCCTGGGCTTCACGGATGCGCGCCAGTCGCCTTTCGCCACATCGTCGGAACATTCCTCTG 
    301. 

  301. 

  302. a score=152242.0
    303. 

  303. s hg18.chr14     7657593 53 - 106368585 cgggcgcgggcggcgcggtcaacgggcgcgggggcggCTTCGCGCCAGGCACC 
    304. 

  304. s panTro2.chr14  7806384 53 - 107349158 cgggcgcgggcggcgcggtcaacgggcgcgggggcggCTTCGCGCCAGGCACC 
    305. 

  305. s mm8.chr12     12099189 53 - 120463159 CGGGTGCACCGGGTGCAGTGAACGGGCGCGGCGGGGCCTTCGCGCCAGGCGCA 
    306. 

  306. 

  307. a score=564664.0
    308. 

  308. s hg18.chr14     7657449 144 - 106368585 AGGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTTCCTGAAGCGTGCggcgggcggcggggacgcgggc---gacgacgacgacgcgggcggctgcggggacg 
    309. 

  309. s panTro2.chr14  7806240 144 - 107349158 AGGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTTCCTGAAGCGTGCggcgggcggcggggacgcgggc---gacgacgacgacgcgggcggctgcggggacg 
    310. 

  310. s mm8.chr12     12099075 114 - 120463159 AGGTGATGGAGGACGCAGGGCTGGGCGCACTGCCGCAGTATGGGGAG------------------AAGCGGGGCGCCTTCCTGAAGCGTGCAGGC---------------GACACGGGTGATGCCGGAGCTGTTGGCTGTGGGGACG 
    311. 

  311. 

  312. a score=158337.0
    313. 

  313. s hg18.chr14     7657397 52 - 106368585 gggggcggcgcggccAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCA 
    314. 

  314. s panTro2.chr14  7806188 52 - 107349158 gggggcggcgcggccAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCA 
    315. 

  315. s mm8.chr12     12099026 49 - 120463159 GGGGC---TGCAGCTGCGGCTCTGGCGGATGAGAAGGCTCTGGCCCTGGGCA 
    316. 

  316. 

  317. a score=706451.0
    318. 

  318. s hg18.chr14     7657293 104 - 106368585 TACTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGTGGTGGGGTgcccggggtcccgggcgcg 
    319. 

  319. s panTro2.chr14  7806084 104 - 107349158 TACTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGTGGTGGGGTgcccggggtcccgggcgcg 
    320. 

  320. s mm8.chr12     12098922 104 - 120463159 TGCTGGAGAACGAGAGCCGGCCTGAGTCGAGCTTCAGCATGGACTCGGAGCTGGGCCGTGGCCGCGAGAACGGAGGTGGCGTGCCACCGGGGGTGGCGGGCGCA 
    321. 

  321. 

  322. a score=424364.0
    323. 

  323. s hg18.chr14     7657246 47 - 106368585 GCCggaggaggaggacgaggaggaggaggaggaggaggaggagCTGC 
    324. 

  324. s panTro2.chr14  7806037 47 - 107349158 GCCggaggaggaggacgaggaggaggaggaggaggaggaggagCTGC 
    325. 

  325. s mm8.chr12     12098878 44 - 120463159 GCCTgaggacga---cgaggacgaggaggaggaagaagaggagCTGC 
    326. 

  326. 

  327. a score=0.0
    328. 

  328. s hg18.chr14 7657213 33 - 106368585 CCACCACGAGAGCGACCCGTCGCTGGGCCACGA 
    329. 

  329. 

  330. a score=1620466.0
    331. 

  331. s hg18.chr14     7657080 133 - 106368585 TGAAGACGCACATGCACAAGGCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTCCCCCGAGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGACTTCCG 
    332. 

  332. s panTro2.chr14  7805871 133 - 107349158 TGAAGACGCACATGCACAAGGCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTCCCCCGAGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGCGACTTCCG 
    333. 

  333. s mm8.chr12     12098715 130 - 120463159 TGAAGACGCACATGCACAAGGCGGGCTCTCTGGCTGGCCGCTCAGACGACGGGCTCTCAGCTGCCAGCTCCCCTGAGCCGGGCACCAGCGAGCTGCCAGGTGA---CCTGAAAGCGGCCGATGGCGACTTCCG 
    334. 

  334. 

  335. a score=1419683.0
    336. 

  336. s hg18.chr14     7657003 77 - 106368585 TCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGTGCTCGCAGGCCAGCAAGCTCAAGCGCCACA 
    337. 

  337. s panTro2.chr14  7805794 77 - 107349158 TCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGTGCTCGCAGGCCAGCAAGCTCAAGCGCCACA 
    338. 

  338. s mm8.chr12     12098638 77 - 120463159 CCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCATGCGTGCTCGCAGGCGAGCAAGCTCAAGCGCCACA 
    339. 

  339. 

  340. a score=2586302.0
    341. 

  341. s hg18.chr14     7656851 152 - 106368585 AGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCTGGCGGCACGCCGCCCCCGCAGCCGCCAGCCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCGCAG 
    342. 

  342. s panTro2.chr14  7805642 152 - 107349158 AGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCTGGCGGCACGCCGCCCCCGCAGCCGCCGGCCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCGCAG 
    343. 

  343. s mm8.chr12     12098489 149 - 120463159 AGTCCCAAGTCCCCGTTCCTCAGCACGCCACCGCTGCCACCCATGCCTGCGGGC---ACACCGCCACCGCAGCCGCCTGCCAAGAGCAAGTCCTGTGAGTTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCGCAG 
    344. 

  344. 

  345. a score=2626021.0
    346. 

  346. s hg18.chr14     7656695 156 - 106368585 GACCGAGTCATGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGTCCCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCCC 
    347. 

  347. s panTro2.chr14  7805486 156 - 107349158 GACCGAGTCATGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGTCCCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCCC 
    348. 

  348. s mm8.chr12     12098333 156 - 120463159 GACCGAGTCATGCGCCTGAACCCCATGGCCATAGACTCTCCTGCCATGGACTTCTCCCGGCGGCTGCGAGAACTGGCCGGCAACAGCTCCACGCCGCCGCCCGTGTCCCCAGGCCGTGGCAACCCTATGCACCGGCTGCTGAACCCTTTCCAGCCC 
    349. 

  349. 

  350. a score=2119797.0
    351. 

  351. s hg18.chr14     7656589 106 - 106368585 GCCGGGCACGCCGCCTCTCTTCAGTCCCCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTC 
    352. 

  352. s panTro2.chr14  7805380 106 - 107349158 GCCGGGCACGCCGCCTCTCTTCAGTCCCCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTC 
    353. 

  353. s mm8.chr12     12098227 106 - 120463159 GCCAGGTACGCCACCGCTCTTCAGCCCACCGCCACGCCATCACTTGGACCCACACCGCCTCAGTGCAGAGGAGATGGGGCTCGTGGCCCAGCACCCCAGTGCCTTC 
    354. 

  354. 

  355. a score=4942642.0
    356. 

  356. s hg18.chr14     7656300 289 - 106368585 GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCGCATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCACCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCT 
    357. 

  357. s panTro2.chr14  7805091 289 - 107349158 GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCGCATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCACCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCT 
    358. 

  358. s mm8.chr12     12097938 289 - 120463159 GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCCTGGTTCCTGCTGCAGCACGCACAGAACACACATGGCTTCCGAATCTACCTGGAGCCTGGGCCGGCCAGCACCTCGCTCACGCCCAGGCTCACCATCCCGCCACCGCTCGGGCCGGAGACCGTGGCGCAGTCCCCACTCATGAATTTCCTGGGGGACAGCAATCCTTTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCTGGCTTCGGTGAGGGCCGCTT 
    359. 

  359. 

  360. a score=629708.0
    361. 

  361. s hg18.chr15    58852016 27 - 100338915 TATAAACACGATTATGTTTCTCACTAA 
    362. 

  362. s mm8.chr2      61086875 27 - 181976762 TATAAACATGATTATGTTTCTCACTAA 
    363. 

  363. s panTro2.chr15 59529448 27 - 100063422 TATAAACACGATTATGTTTCTCACTAA 
    364. 

  364. 

  365. a score=373301.0
    366. 

  366. s hg18.chr15    58851981 35 - 100338915 TTGGGGAGAGAATTGGATTCAAGCAGCATCCAAAA 
    367. 

  367. s panTro2.chr15 59529413 35 - 100063422 TTGGGGAGAGAATTGGATTCAAGCAGCATCCAAAA 
    368. 

  368. s mm8.chr2      61086840 35 - 181976762 TTGGGGAGAGAATTGGATTCAAGCAGCATCCAAAA 
    369. 

  369. 

  370. a score=2237520.0
    371. 

  371. s hg18.chr15    58851855 126 - 100338915 ATATTGCTTTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATGCCCAGCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTGGGTGATCCAGTGCCTCATTG 
    372. 

  372. s panTro2.chr15 59529287 126 - 100063422 ATATTGCTTTGGGGGTATTTGATGTGGTGGTGACGGACCCCTCATGCCCAGCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACAAGAGTGGGTGATCCAGTGCCTCATTG 
    373. 

  373. s mm8.chr2      61086714 126 - 181976762 ACATTGCTTTAGGGGTATTTGATGTGGTGGTGACAGACCCCTCATGCCCAGCCTCGGTGCTCAAGTGTGCTGAAGCCTTGCAACTGCCTGTGGTATCACAAGAATGGGTGATCCAGTGCCTCATTG 
    374. 

  374. 

  375. a score=562984.0
    376. 

  376. s hg18.chr15     41673708 75 + 100338915 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTCT 
    377. 

  377. s panTro2.chr15  40727968 75 + 100063422 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTCT 
    378. 

  378. i panTro2.chr15                          C 0 C 0                                                                     
    379. 

  379. s mm8.chr2      121050290 75 + 181976762 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCTGGACTCAGGCTCCTGGCTTTGGCTGGAGCTGGGTCT 
    380. 

  380. i mm8.chr2                               C 0 C 0                                                                     
    381. 

  381. 

  382. a score=535926.0
    383. 

  383. s hg18.chr15     41673783 74 + 100338915 CTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGA---GCTGCCAGTGAACGACGGAGGCTGTATCCCCCGAG 
    384. 

  384. s panTro2.chr15  40728043 74 + 100063422 CTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGA---GCGGCCAGTGAACGACGGAGGCTGTATCCCCCGAG 
    385. 

  385. i panTro2.chr15                          C 0 C 0                                                                       
    386. 

  386. s mm8.chr2      121050365 77 + 181976762 CTCACCGCCGGGATTCTGCTCCGCCCGGAATCTGTAGGAGCTGCCGCTGCTGAACGGAGGAGACTGTATCCCCCGAG 
    387. 

  387. i mm8.chr2                               C 0 C 0                                                                       
    388. 

  388. 

  389. a score=1893961.0
    390. 

  390. s hg18.chr15    58659665 89 - 100338915 GTCGAAGTACAGCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCCCTGGTATTGACTATCAGCTTCCTTGGCCACCTGCTATGA 
    391. 

  391. s panTro2.chr15 59329615 89 - 100063422 GTCGAAGTACAGCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCCCTGGTATTGACTATCAGCTTCCTTGGCCACCTGCTATGA 
    392. 

  392. s mm8.chr2      60921257 89 - 181976762 GTCGAAACTCAGCCTGGGGTCTCTACGACTGGTTCCAAGCCTCCTGGGCCCTGGCATTGCCCGTCAGCATTTTTGGCCACCTATTATGA 
    393. 

  393. 

  394. a score=118616.0
    395. 

  395. s hg18.chr15     41826029 31 + 100338915 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGG 
    396. 

  396. s mm8.chr2      121105479 31 + 181976762 ATGCGCTTCAGCTGCCTAGCTCTGCTCCCGG 
    397. 

  397. i mm8.chr2                               C 0 C 0                         
    398. 

  398. s panTro2.chr15  40866268 31 + 100063422 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGG 
    399. 

  399. i panTro2.chr15                          C 0 C 0                         
    400. 

  400. 

  401. a score=284293.0
    402. 

  402. s hg18.chr15     41826060 57 + 100338915 GTGTGGCGCTGCTTCTTGCCGCGGCCCGCCTCGCCGCTGCCTCCGACGTGCTAGAAC 
    403. 

  403. s panTro2.chr15  40866299 57 + 100063422 GTGTGGCGCTGCTTCTTGCCGCGGCCCGCCTCGCCGCTGCCTCCGACGTGCTAGAAC 
    404. 

  404. i panTro2.chr15                          C 0 C 0                                                   
    405. 

  405. s mm8.chr2      121105510 57 + 181976762 GCGTGGCGCTGCTGCTCGCCTCGGCCCGTCTCGCCGCCGCCTCCGATGTGTTGGAAC 
    406. 

  406. i mm8.chr2                               C 0 C 0                                                   
    407. 

  407. 

  408. a score=259946.0
    409. 

  409. s hg18.chr15     41826117 36 + 100338915 TCACGGACGACAACTTCGAGAGTCGCATCTCCGACA 
    410. 

  410. s mm8.chr2      121105567 36 + 181976762 TGACGGACGAAAACTTCGAGAGTCGCGTCTCCGACA 
    411. 

  411. i mm8.chr2                               C 0 C 0                              
    412. 

  412. s panTro2.chr15  40866356 36 + 100063422 TCACGGACGACAACTTCGAGAGTCGCATCTCCGACA 
    413. 

  413. i panTro2.chr15                          C 0 C 0                              
    414. 

  414. 

  415. a score=478199.0
    416. 

  416. s hg18.chr15     41826153 43 + 100338915 CGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG 
    417. 

  417. s panTro2.chr15  40866392 43 + 100063422 CGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG 
    418. 

  418. i panTro2.chr15                          C 0 C 0                                     
    419. 

  419. s mm8.chr2      121105603 43 + 181976762 CGGGCTCGGCGGGGCTCATGCTAGTCGAGTTCTTCGCCCCCTG 
    420. 

  420. i mm8.chr2                               C 0 C 0                                     
    421. 

  421. 

  422. a score=71812.0
    423. 

  423. s hg18.chr16      142908 17 +  88827254 ATGTCTCTGACCAAGAC 
    424. 

  424. s mm8.chr11     32176663 17 + 121798632 ATGTCTCTGATGAAGAA 
    425. 

  425. i mm8.chr11                             C 0 C 0           
    426. 

  426. s panTro2.chr16   146323 17 +  90682376 ATGTCTCTGACCAAGAC 
    427. 

  427. i panTro2.chr16                         C 0 C 0           
    428. 

  428. 

  429. a score=320391.0
    430. 

  430. s hg18.chr16      142925 78 +  88827254 TGAGAGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGGAGAG 
    431. 

  431. s mm8.chr11     32176680 78 + 121798632 TGAGAGAGCTATCATCATGTCCATGTGGGAGAAGATGGCTGCTCAGGCCGAGCCCATTGGCACTGAGACTCTAGAGAG 
    432. 

  432. i mm8.chr11                             C 0 C 0                                                                        
    433. 

  433. s panTro2.chr16   146340 78 +  90682376 TGAGGGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGGAGAG 
    434. 

  434. i panTro2.chr16                         C 0 C 0                                                                        
    435. 

  435. 

  436. a score=1751098.0
    437. 

  437. s hg18.chr16    88647174 117 - 88827254 CGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAA 
    438. 

  438. s panTro2.chr16 90501243 117 - 90682376 CGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGGAGTGCGAAATACAAGTAA 
    439. 

  439. s mm8.chr17     26007615 117 + 95177420 CGGAAGTTTTCCCGTTCCAGATCCCGAGATAGATACAGGCGCCATCGCAGCCGTTCCCGGAGCCACAGCCGGGGTCACCGCCGGGCTTCCAGGGACCGGAGTACAAAATACAAGTAA 
    440. 

  440. 

  441. a score=362047.0
    442. 

  442. s hg18.chr16    88647119 55 - 88827254 GTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGA 
    443. 

  443. s panTro2.chr16 90501188 55 - 90682376 GTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGA 
    444. 

  444. s mm8.chr17     26007560 55 + 95177420 GTCACGCTCCCGGGATCGTCGACGGAGGCGGTCTAGGTCTACCTCCAGAGAGCGG 
    445. 

  445. 

  446. a score=119311.0
    447. 

  447. s hg18.chr16      244413 4 + 88827254 ATGT    
    448. 

  448. s panTro2.chr16   250030 4 + 90682376 ATGT    
    449. 

  449. i panTro2.chr16                       C 0 C 0 
    450. 

  450. s mm8.chr17     69229272 4 - 95177420 ATGA    
    451. 

  451. i mm8.chr17                           C 0 C 0 
    452. 

  452. 

  453. a score=805217.0
    454. 

  454. s hg18.chr16      244417 122 + 88827254 TGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATCTGGGAAATCCATCAAAAAATGAGGATAACGTGAAAAGCGCGCCTCCACAGTCC 
    455. 

  455. s panTro2.chr16   250034 122 + 90682376 TGGACCACAAGGACTTAGAAGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATCTGGGAAATCCATCAAAAAATGAGGATAACGTGAAAAGCGCGCCTCCACAGTCC 
    456. 

  456. i panTro2.chr16                         C 0 C 0                                                                                                                    
    457. 

  457. s mm8.chr17     69229276 122 - 95177420 TGGACAACAAGGACTTAGAAGCTGAAATACACCCCTTGAAGAATGAGGACAAGAAATCACAGGAAAACCCAGGAAACCTACCAAGAAACGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCC 
    458. 

  458. i mm8.chr17                             C 0 C 0                                                                                                                    
    459. 

  459. 

  460. a score=459982.0
    461. 

  461. s hg18.chr16      244539 41 + 88827254 CGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATT 
    462. 

  462. s panTro2.chr16   250156 41 + 90682376 CGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATT 
    463. 

  463. i panTro2.chr16                        C 0 C 0                                   
    464. 

  464. s mm8.chr17     69229398 41 - 95177420 CGCTTGTCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCT 
    465. 

  465. i mm8.chr17                            C 0 C 0                                   
    466. 

  466. 

  467. a score=699262.0
    468. 

  468. s hg18.chr16      244580 60 + 88827254 GTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTCATTCGTCATCCCGTGTCCAGACCGGCC 
    469. 

  469. s panTro2.chr16   250197 60 + 90682376 GTTTCTCTGCCTTTTTGTGGTGTTCGTCGCCTCATTCGTCATCCCGTGTCCAGACCGGCC 
    470. 

  470. i panTro2.chr16                        C 0 C 0                                                      
    471. 

  471. s mm8.chr17     69229439 60 - 95177420 GTTCACCTGCCTCTTCGTGGTGTTTGTCCTGTCTTTCATCATCCCATGTCCAGACCGTCC 
    472. 

  472. i mm8.chr17                            C 0 C 0                                                      
    473. 

  473. 

  474. a score=263619.0
    475. 

  475. s hg18.chr16      244640 41 + 88827254 GGCGTCACAGCGAATGTGGAGGATAGACTACAGTGCCGCTG 
    476. 

  476. s panTro2.chr16   250257 41 + 90682376 GGCGTCACAGCAAATGTGGAGGATAGACTACAGTGCCGCTG 
    477. 

  477. i panTro2.chr16                        C 0 C 0                                   
    478. 

  478. s mm8.chr17     69229499 41 - 95177420 CTCCTCACAGGGCACGTGGAAGCTTGACTACAACAATGCAG 
    479. 

  479. i mm8.chr17                            C 0 C 0                                   
    480. 

  480. 

  481. a score=-184929.0
    482. 

  482. s hg18.chr16    88567958 28 - 88827254 CCCTGGGGGTGGAGATGGGGTGGCCTAG 
    483. 

  483. s panTro2.chr16 90415110 23 - 90682376 -----GGGGTGGAGATGGGGTGGCCTAG 
    484. 

  484. s mm8.chr17     25938305 28 + 95177420 CCCTGAAGGTGCCGATGGGGAGTAGTAG 
    485. 

  485. 

  486. a score=-142475.0
    487. 

  487. s hg18.chr16 88567938 20 - 88827254 GAGCCCACAGCGGCTTGTGG 
    488. 

  488. s mm8.chr17  25938285 20 + 95177420 GAGCCTGCAGCAACCAGTTC 
    489. 

  489. 

  490. a score=-5251.0
    491. 

  491. s hg18.chr16 88567925 13 - 88827254 TCCCACCCCTGTG 
    492. 

  492. s mm8.chr17  25938272 13 + 95177420 GTCTACCCCCAGG 
    493. 

  493. 

  494. a score=428688.0
    495. 

  495. s hg18.chr16    88567871 54 - 88827254 CGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCACTCCT 
    496. 

  496. s panTro2.chr16 90414601 54 - 90682376 CGTGTTCCCAATTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCACTCCT 
    497. 

  497. s mm8.chr17     25938218 54 + 95177420 GCCATTTCCATTCTTGCGGAAGCCTCTGCACTCAAGCCCCAGCCCTGCTCTCCA 
    498. 

  498. 

  499. a score=1837801.0
    500. 

  500. s hg18.chr18    52330965 74 - 76117153 ACTATGATTACCTGAACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACATGTATGGTGGAGGTGATGACTGA 
    501. 

  501. s panTro2.chr18 53421695 74 - 77261746 ACTATGATTACCTGAACGACTGGGGGCCACGGTTCAAGAAACTTGCTGACATGTATGGTGGAGGTGATGACTGA 
    502. 

  502. s mm8.chr18     74003599 74 - 90736837 ACTATGACTACCTGAATGACTGGGGACCCCGCTTCAAGAAACTGGCGGACATGTACGGCGGTGGTGACGACTGA 
    503. 

  503. 

  504. a score=469497.0
    505. 

  505. s hg18.chr18    52330944 21 - 76117153 CAAGTAGTGGTGGTGAGCAGG 
    506. 

  506. s panTro2.chr18 53421674 21 - 77261746 CAAGTAGTGGTGGTGAGCAGG 
    507. 

  507. s mm8.chr18     74003578 21 - 90736837 CCAGTAGCGGTGGGGACCAGG 
    508. 

  508. 

  509. a score=2266476.0
    510. 

  510. s hg18.chr18    52330832 112 - 76117153 GGCCTTAAAGCGGCTGACAATGACCCCACAGCTCCACCATATGACTCCCTGTTAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCT 
    511. 

  511. s panTro2.chr18 53421562 112 - 77261746 GGCCTTAAAGCGGCTGACAATGACCCGACAGCTCCACCATATGACTCCCTGTTAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGAGCTCCCTTAATTCCT 
    512. 

  512. s mm8.chr18     74003466 112 - 90736837 GGCCTTAAAGCTGCTGACAACGACCCCACGGCGCCACCGTATGACTCCCTCTTAGTCTTTGACTACGAGGGCAGCGGCTCCACGGCTGGCTCCTTGAGCTCCCTCAACTCCT 
    513. 

  513. 

  514. a score=1391235.0
    515. 

  515. s hg18.chr18     59406881 165 +  76117153 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG 
    516. 

  516. s panTro2.chr18  60102164 165 +  77261746 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGCTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG 
    517. 

  517. i panTro2.chr18                           C 0 C 0                                                                                                                                                               
    518. 

  518. s mm8.chr1      108809701 165 + 197069962 ATGGACTCACTAGGCACAGCAGCCACACAGTTCCTGTTTGATCTTTTCAAAGAACTGAATAAAACAAATGATGGCAACGTCTTCTTTTCCCCTGTGGGCATCTCAACAGCCATTGGCATGATCATCCTGGGGACCCGAGGAGCCACTGCTTCTGAGTTACAGAAG 
    519. 

  519. i mm8.chr1                                C 0 C 0                                                                                                                                                               
    520. 

  520. 

  521. a score=725586.0
    522. 

  522. s hg18.chr18    16661111 110 -  76117153 CATCTCCTTCAACTAATGAAGAGTTCTGTTGTAATCACCCTTTCCTATTCTTCATAAGGCAAAATAAGACCAACAGCATCCTCTTCTATGGCAGATTCTCATCCCCATAG 
    523. 

  523. s panTro2.chr18 17099295 110 -  77261746 CATCTCCTTCAACTAATGAAGAGTTCCGTTGTAATCACCCTTTCCTATTCTTCATAAGGCAAAATAAGACCAACAGCATCCTCTTCTATGGCAGATTCTCATCCCCGTAG 
    524. 

  524. s mm8.chr1      88222178 101 - 197069962 TATCTTTACAGATTACAGAAGATTTCTATTGTGATCATCCATTG---------GTCAAGCACAGTAAGACCAACAGCATCCTCTTCTTTGGCACAATCTCTTCCCCTTAA 
    525. 

  525. 

  526. a score=-126872.0
    527. 

  527. s hg18.chr18    16661103 8 -  76117153 CGAATTAT 
    528. 

  528. s panTro2.chr18 17099287 8 -  77261746 CGAATTAT 
    529. 

  529. s mm8.chr1      88222173 5 - 197069962 TA---ATT 
    530. 

  530. 

  531. a score=1725446.0
    532. 

  532. s hg18.chr18    16660844 259 -  76117153 TGATGGAATGGACAAGTTTGCAGAATATGAGAGAGACATGTGTCGATTTACACTTACCTCGGTTCAAAATGGAAGAGAGCTATGACCTCAAGGACACGTTGAGAACCATGGGAATGGTGAATATCTTCAATG---GGGATGCAGACCTCTCAGGCATGACCTGGAGCCACGGTCTCTCAGTATCTAAAGTCCTACACAAGGCCTTTGTGGAGGTCACTGAGGAGGGAGTGGAAGCTGCAGCTGCCACCGCTGTAGTAGTAGT 
    533. 

  533. s panTro2.chr18 17099028 259 -  77261746 TGATGGAATGGACAAGTTTGCAGAATATGAGAGAGACACATGTCGATTTACACTTACCTCGGTTCAAAATGGAAGAGAGCTATGACCTCAAGGACACGTTGAGAACCATGGGAATGGTGAATATCTTCAATG---GGGATGCAGACCTCTCAGGCATGACTGGGAGCCGCGGTCTCTCGGTATCTAAAGTCCTACACAAGGCCTTTGTGGAGGTCACTGAGGAGGGAGCGGAAGCTGCAGCTGCCACCGCTGTAGTAGTAGT 
    534. 

  534. s mm8.chr1      88221911 262 - 197069962 TACTAGAATGGACAAGAGCAGAAAATATGCATATGACCGAGTTGTATTTATCTTTGCCTCGGTTCAAAGTGGAAGAGAAGTATGACCTCTCAGTTCCATTGAAACACATGGGGATGGTTGGCGCCTTTGATCCACAGAAGGCTGACTTCTCTGGCATGAACAGCACTCAAGGTCTTGTGGTGTCTAAAGTTTTACACAAGTCCTTTGTGGAGGTAAATGAAGAGGGAACAGAAGCTGCTGCTACCACGGGGATAAAATCCCA 
    535. 

  535. 

  536. a score=231361.0
    537. 

  537. s hg18.chr18    16660816 28 -  76117153 CTTGAAGAGAAACTCACTGCTGAGAAAT 
    538. 

  538. s panTro2.chr18 17099000 28 -  77261746 CTTGAAGAGAAACTCACTGCTGAGAAAT 
    539. 

  539. s mm8.chr1      88221883 28 - 197069962 CTTGAAGAACAACTCTCTACTGAAAAGT 
    540. 

  540. 

  541. a score=2290170.0
    542. 

  542. s hg18.chr18     59600586 154 +  76117153 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCCCTCT 
    543. 

  543. s panTro2.chr18  60332677 154 +  77261746 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCTCTCT 
    544. 

  544. i panTro2.chr18                           C 0 C 0                                                                                                                                                    
    545. 

  545. s mm8.chr1      109255795 154 + 197069962 ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAGGAAATGGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGACCCTAATCCGTCTGGGTGCTCGAGGTGACTGTGCAC 
    546. 

  546. i mm8.chr1                                C 0 C 0                                                                                                                                                    
    547. 

  547. 

  548. a score=17919.0
    549. 

  549. s hg18.chr18     59600740 14 +  76117153 CTCAGATTGATAAG 
    550. 

  550. s panTro2.chr18  60332831 14 +  77261746 CTCAGATTGATAAG 
    551. 

  551. i panTro2.chr18                          C 0 C 0        
    552. 

  552. s mm8.chr1      109255949 14 + 197069962 GTCAGATTGACAAG 
    553. 

  553. i mm8.chr1                               C 0 C 0        
    554. 

  554. 

  555. a score=177042.0
    556. 

  556. s hg18.chr19      59068595 42 + 63811651 ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACG 
    557. 

  557. s panTro2.chr19   59561975 42 + 64473437 ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACG 
    558. 

  558. i panTro2.chr19                          C 0 C 0                                    
    559. 

  559. s mm8.chr7_random    82256 42 -   243910 ATGCCGGTAACAGTAACTCGTACAACCATCACGACTACAACG 
    560. 

  560. i mm8.chr7_random                        C 0 C 0                                    
    561. 

  561. 

  562. a score=-114935.0
    563. 

  563. s hg18.chr19      59068637 25 + 63811651 ACGTCATCTTCGGGCCTGGGGTCCC 
    564. 

  564. s panTro2.chr19   59562017 25 + 64473437 ACGTCATCTTCGGGCCTGGGGTCCC 
    565. 

  565. i panTro2.chr19                          C 0 C 0                   
    566. 

  566. s mm8.chr7_random    82298  7 -   243910 TCA------------------TCCT 
    567. 

  567. i mm8.chr7_random                        C 0 C 0                   
    568. 

  568. 

  569. a score=340234.0
    570. 

  570. s hg18.chr19      59068662 63 + 63811651 CCATGATCGTGGGGTCCCCTCGGGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC 
    571. 

  571. s mm8.chr7_random    82305 63 -   243910 CCACCACTGTGGGGTCCGCTCGGGCGCTGACCCAGCCGCTGGGCCTCCTCCGCCTCCTGCAGC 
    572. 

  572. i mm8.chr7_random                        C 0 C 0                                                         
    573. 

  573. s panTro2.chr19   59562042 63 + 64473437 CCACGATCGTGGGGTCCCCTCGGGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC 
    574. 

  574. i panTro2.chr19                          C 0 C 0                                                         
    575. 

  575. 

  576. a score=295172.0
    577. 

  577. s hg18.chr19      59068725 23 + 63811651 TGGTGTCTACCTGCGTGGCCTTC 
    578. 

  578. s mm8.chr7_random    82368 23 -   243910 TAATATCCACCTGTGTGGCTTTC 
    579. 

  579. i mm8.chr7_random                        C 0 C 0                 
    580. 

  580. s panTro2.chr19   59562105 23 + 64473437 TGGTGTCTACCTGCGTGGCCTTC 
    581. 

  581. i panTro2.chr19                          C 0 C 0                 
    582. 

  582. 

  583. a score=161030.0
    584. 

  584. s hg18.chr19      59068748 38 + 63811651 TCGCTGGTGGCTAGCGTGGGCGCCTGGACGGGGTCCAT 
    585. 

  585. s panTro2.chr19   59562128 38 + 64473437 TCGCTGGTGGCTAGCGTGGACGCCTGGACGGGGTCCAT 
    586. 

  586. i panTro2.chr19                          C 0 C 0                                
    587. 

  587. s mm8.chr7_random    82391 38 -   243910 TCGCTGGTGGCCAGTGTGGGTGCCTGGACAGGGCCCAT 
    588. 

  588. i mm8.chr7_random                        C 0 C 0                                
    589. 

  589. 

  590. a score=1769153.0
    591. 

  591. s hg18.chr19      59068786 173 + 63811651 GGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCCTGCTATGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCA 
    592. 

  592. s panTro2.chr19   59562166 173 + 64473437 GGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCCTGCTACGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCA 
    593. 

  593. i panTro2.chr19                           C 0 C 0                                                                                                                                                                       
    594. 

  594. s mm8.chr7_random    82429 173 -   243910 GGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTTGCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCTGTCATGGCGAAACTTCCCCATCACCTTTGCCTGCTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCA 
    595. 

  595. i mm8.chr7_random                         C 0 C 0                                                                                                                                                                       
    596. 

  596. 

  597. a score=1066893.0
    598. 

  598. s hg18.chr19      59068959 145 + 63811651 CCACCTATGTCCAGTTCCTGTCCCACGGCCGTTCGCGGGACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGC 
    599. 

  599. s panTro2.chr19   59562339 145 + 64473437 CCACCTATGTCCAGTTCCTGCCCCACGGTCGTTCGCGGGACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGC 
    600. 

  600. i panTro2.chr19                           C 0 C 0                                                                                                                                           
    601. 

  601. s mm8.chr7_random    82602 145 -   243910 CCACCTATGTGCAGTTCCTAGCTCATGGACGTACCCGGGACCATGCCATCGCTGCCACCACTTTCTCCTGCGTTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGGC 
    602. 

  602. i mm8.chr7_random                         C 0 C 0                                                                                                                                           
    603. 

  603. 

  604. a score=925227.0
    605. 

  605. s hg18.chr19      59069104 98 + 63811651 CACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCC 
    606. 

  606. s panTro2.chr19   59562484 98 + 64473437 CACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTGGCCTGCATCATCTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCC 
    607. 

  607. i panTro2.chr19                          C 0 C 0                                                                                            
    608. 

  608. s mm8.chr7_random    82747 98 -   243910 TACCGTGCCAGGGCTGCTCAAAGTTTTTGAGACCTTCGTAGCCTGTATCATCTTTGCCTTCATCAGTGAGCCGCTCCTGTATAATCAGAAGCCAGCCC 
    609. 

  609. i mm8.chr7_random                        C 0 C 0                                                                                            
    610. 

  610. 

  611. a score=900583.0
    612. 

  612. s hg18.chr19      59069202 89 + 63811651 TGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTA 
    613. 

  613. s panTro2.chr19   59562582 89 + 64473437 TGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTA 
    614. 

  614. i panTro2.chr19                          C 0 C 0                                                                                   
    615. 

  615. s mm8.chr7_random    82845 89 -   243910 TGGAGTGGTGTGTGGCAGTCTATGCCATCTGCTTCATACTAGCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTG 
    616. 

  616. i mm8.chr7_random                        C 0 C 0                                                                                   
    617. 

  617. 

  618. a score=962595.0
    619. 

  619. s hg18.chr19      59069291 193 + 63811651 CCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCG------CAGCCATG------CCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGG 
    620. 

  620. s panTro2.chr19   59562671 193 + 64473437 CCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACTGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCG------CAGCCATG------CCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGG 
    621. 

  621. i panTro2.chr19                           C 0 C 0                                                                                                                                                                                                       
    622. 

  622. s mm8.chr7_random    82934 205 -   243910 CCCATCCCTTTCCCCACCTTCCTCTCAGGCTTGGCCTTACTCTCTGTTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATTTGATCAGAGATATCAGGGCCAACCCCGCCGTTCAATGGATCCAAGCTGCACTCGTAGTATTAGTTATATACAACCCAACACGGTGTGTTTCTGGGACCGACGACTGGCGGTGT 
    623. 

  623. i mm8.chr7_random                         C 0 C 0                                                                                                                                                                                                       
    624. 

  624. 

  625. a score=613379.0
    626. 

  626. s hg18.chr19      59069484 80 + 63811651 CCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCTGGTTTTTGTCAAGGTCTAA 
    627. 

  627. s panTro2.chr19   59562864 80 + 64473437 CCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCTGGTTTTTGTCAAGGTCTAA 
    628. 

  628. i panTro2.chr19                          C 0 C 0                                                                          
    629. 

  629. s mm8.chr7_random    83139 80 -   243910 CCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCCACTCGTCTGGTGTTCGTCAAGGTCTGA 
    630. 

  630. i mm8.chr7_random                        C 0 C 0                                                                          
    631. 

  631. 

  632. a score=200956.0
    633. 

  633. s hg18.chr19    4575513 112 - 63811651 CCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCTGTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAATATGCGGCACTGAAAGTGTAG 
    634. 

  634. s panTro2.chr19 4741219 112 - 64473437 CCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCTGTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCGTGAATATGCGGCACTGAAAGTGTAG 
    635. 

  635. 

  636. a score=102826.0
    637. 

  637. s hg18.chr19    4575505 8 - 63811651 ACGGCAGA 
    638. 

  638. s panTro2.chr19 4741211 8 - 64473437 ACGGCAGA 
    639. 

  639. 

  640. a score=…
    641.