/test-data/chr22_5sp.maf

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 2035 lines · 1851 code · 184 blank · 0 comment · 0 complexity · 2fba0aa875846904534d084a55e23f2d MD5 · raw file

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  1. ##maf version=1
  2. a score=72335.0
  3. s ponAbe2.chr14_random 4420348 101 + 7454900 ggTGAGatgctcactaccttagtgacggcttcaatcgtaccccaaaactcagtatcacacaat------------aaacctgcacatttttatttaatctaaaataaaagttg
  4. s hg18.chr22 14689667 101 + 49691432 ggTGAGatgctcattaccttagtgatggcttcaatcataccccaaaactcagtatcacacgat------------aaacctgcacatttttattcagtctaaaataaaagttg
  5. i hg18.chr22 C 0 C 0
  6. s panTro2.chr14 18511284 101 + 107349158 AGTGAGatgctcactaccttagtgatggcttcaatcataccccaaaactcagtatcacacaat------------aaacctgcacatttttattcaatctaaaataaaagttg
  7. i panTro2.chr14 C 0 C 0
  8. s rheMac2.chr13 136584868 100 + 138028943 -GTGAGatgctcactaacttagtgatggctttaatcataccccaaaactcagtatcacacaat------------aaacttgcacatttttgttcaatctaaaataaaagttg
  9. i rheMac2.chr13 C 0 C 0
  10. s calJac1.Contig8413 25710 112 + 95389 ggtactattcttgcta-cttggcgatggcttcaatcctatcccaaaattcagcatcacacaatataccctgtaacaaacctgcacatctaccccgaatctaaaataaaagttg
  11. i calJac1.Contig8413 N 0 I 1443
  12. a score=23402.0
  13. s ponAbe2.chr14_random 4421542 33 + 7454900 AACACTGACCTAAGTGGATAAACACATGGCAAC
  14. s hg18.chr22 14690862 33 + 49691432 AACGTTGACCTAAGTGGATAAACGCATGGCAAC
  15. i hg18.chr22 C 0 C 0
  16. s panTro2.chr14 18512475 33 + 107349158 AACGTTGACCTAAGTGGATAAACGCATGGCAAC
  17. i panTro2.chr14 C 0 C 0
  18. s rheMac2.chr13 136586050 33 + 138028943 AACATTGACCGAAGTGGATAAATGCATGGCAAT
  19. i rheMac2.chr13 C 0 C 0
  20. s calJac1.Contig8413 27265 33 + 95389 AGCATTGACCTAAGAGAGTAAATGGATGGCAAG
  21. i calJac1.Contig8413 I 1443 N 0
  22. a score=37887.0
  23. s ponAbe2.chr22 13585900 69 + 46535552 ggtcttccggatttctaaaccattttcAAAGAGTAAGTGATTCACATTAAAAAGGCATATTTcagctgc
  24. s rheMac2.chr9 37387610 69 + 133323859 ggtctcctggatttctaaactattttcAAAGAGTAAGCGATTCACATTAAGAAGACATATTTcagttgc
  25. i rheMac2.chr9 C 0 C 0
  26. s panTro2.chr10 27717141 69 + 135001995 GGTCTTCTGGATTTCTAAACCATCTTCAAAGAGTAAGTGATTCACATTAAAAAGACATATTTcggctgc
  27. i panTro2.chr10 I 856 C 0
  28. s hg18.chr22 14865624 69 + 49691432 ggtcttctgggtttctaaaccattttcAAAGAGTAAGTGATTCACATTAAAAAGACATATTTcagctgc
  29. i hg18.chr22 C 0 C 0
  30. s calJac1.Contig7684 73267 52 - 101326 ----------------aaaccatcttcAAA-AGTAAGTAAGTAACATTAAAAAGACATATTTTAgctgc
  31. i calJac1.Contig7684 N 0 C 0
  32. a score=28433.0
  33. s ponAbe2.chr22 13585969 53 + 46535552 tctgcctatagagtagccattccattcttttattcctttaccttcttaataaa
  34. s rheMac2.chr9 37387679 48 + 133323859 tctgcctatggagtagcca-----ttcttttattcctttactttgttaataaa
  35. i rheMac2.chr9 C 0 C 0
  36. s panTro2.chr10 27717210 48 + 135001995 tctgcctatggagtagcca-----ttcttttattcctttactttcttaataaa
  37. i panTro2.chr10 C 0 I 218
  38. s hg18.chr22 14865693 53 + 49691432 tctgcctatggagtagccattccgttcttttattcctttaccttcttaataaa
  39. i hg18.chr22 C 0 C 0
  40. s calJac1.Contig7684 73319 42 - 101326 tctgcctatggagtagcca-----ttcttttattcctttactttctt------
  41. i calJac1.Contig7684 C 0 N 0
  42. a score=31907.0
  43. s ponAbe2.chr22 13601555 113 + 46535552 AAATGTCCTGTTTAGTTTCTGGATACAAGtttttgagttttagttttcctaatctttaaaaagagttaatattagttaggcaccctggctcatgcctgtaatcccagtacttt
  44. s hg18.chr22 14879601 113 + 49691432 AAATGTCCTGTTTAGTTTCTGGATACAAGTTTTTGAGCTTTAGTTTTCCTAATCTTTAAAAAGAGTTAATATTagtcggacagcgtggctcacaattgtaatcccagcacttt
  45. i hg18.chr22 C 0 C 0
  46. s panTro2.chr10 28793519 57 + 135001995 AAAGGTCCAGTTTCATTTCTGGATACAAGtttttgagctttaattttcttaatcttt--------------------------------------------------------
  47. i panTro2.chr10 C 0 C 0
  48. s rheMac2.chr9 37402661 113 + 133323859 AAATGTCCTGTTTAGTTTCTGGATACATGtttttgagctttagttttcctaatctttagaaagaattaatattagttgggcacggtggctcacacctgtaatcccagcacttt
  49. i rheMac2.chr9 C 0 C 0
  50. s calJac1.Contig31 207366 51 + 1545170 AGACGTACTAT--------------------------------------------------------------ggccgggagcggtggctcaagcctgtaatcccagcacttt
  51. i calJac1.Contig31 N 0 C 0
  52. a score=1818.0
  53. s ponAbe2.chr22 13762172 93 + 46535552 AGTTCCTtcctc---aaagtgtggtctgggtcaggccacctgcattagaatccacaggaagggggctgggagaggggt--gctagtta--tttttacagc
  54. s rheMac2.chr10 61844509 88 + 94855758 aatc-----ctc---aaagtgtggtctgggtcaggccaactgcattagaatccataggaagggggctgggagaggggt--gctagtta--tttttacagc
  55. i rheMac2.chr10 I 309 C 0
  56. s panTro2.chr22 16069569 79 + 50165558 aaTCACCTGCTCTGGGAAGTGCAGTTTCTTCCAGCCTACCT---------------------AGGCCAGGAGCAAAGTCAGCTCATCAATTTTTGCCAGC
  57. i panTro2.chr22 C 0 I 185
  58. s hg18.chr22 16061104 79 + 49691432 aaTCACCTGCTCTGGGAAGTGCAGTTTCTTCCAGCCTACCT---------------------AGGCCAGGAGCAAAGTCAGCTCATCAATTTTTGCCAGC
  59. i hg18.chr22 C 0 I 185
  60. s calJac1.Contig6986 119247 53 - 144597 -------tccta---accttgtgatct------gcctgcct----tggcctcccaaa-----gtgctgagattacagg----------------------
  61. i calJac1.Contig6986 N 0 C 0
  62. a score=24071.0
  63. s ponAbe2.chr22 13762515 81 + 46535552 TGCATTCAGGCTACTGAACAGAACTACATTACAGGGAACAAAGGAAGGAGTGAAGTGGAAAACCAT---GGTCCCAGAAAGGAT
  64. s hg18.chr22 16061368 70 + 49691432 TGCACTCAG----------AGAGTTAAA--ATAGAAAACAAGCAACAGATCCAAGTGGAGA--CATGCAGATCACACAAGAGAT
  65. i hg18.chr22 I 185 N 0
  66. s panTro2.chr22 16069833 70 + 50165558 TGCACTCAG----------AGAGTTAAA--ATAGAAAACAAGCAACAGATCCAAGTGGAGA--CATGCAGATCACACAAGAGAT
  67. i panTro2.chr22 I 185 N 0
  68. s rheMac2.chr10 61845162 79 + 94855758 TGCATTCAGGCTACCGAAAAGAAACATT--ATAGGGAACAAAGGAAGGAGGGAACTGGAAAGCCAT---GGTCCCAGAAAGCAC
  69. i rheMac2.chr10 C 0 C 0
  70. s calJac1.Contig6986 119509 79 - 144597 TGCATTTGGGCTACTGAAAAGAAACGTT--ACAGGGAACGAAGGAATGAGGGAAGTGGAAAGCCCT---GGTCCCAGACAGAAT
  71. i calJac1.Contig6986 C 0 C 0
  72. a score=273897.0
  73. s ponAbe2.chr22 13767485 392 + 46535552 agtaaCCTCAGGGGAGCACTCTGTAGACATTTCTGTG-ATCAAACTAATTGTCACTTAT--AATATTACTATACAAggccaggcacaatggctcggctcatgcccgtagttctagcactttgggaggccaaggcgagaggatggcttgagccccagagttcaagaccagcctgggcaacacggcaaaaccccatctc-acaaaaaaatacaaaaaattagctgggcatgatggtgcacacctctagggtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattttgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAG
  74. s panTro2.chr22 16075328 390 + 50165558 agtaacctcaggggagcactctgtagacatttctgtg-atcaaattaattgtcacttat--aatattactatacaatgccaggcacaATGGCTCggctcatgcctgtagtcctagcactttgggaggccaaggcgagaggacggcttgagccgcagagttcaagaccagcctgggcaacatggcaaaactccatctc-ac-aaaaaatac-aaaaattagctgggcatgatggtgcacacctctagtgtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattgtgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAA
  75. i panTro2.chr22 C 0 C 0
  76. s rheMac2.chr10 61852204 358 + 94855758 aataacctcaggggagcactctctagacatctgtgtg-accaaactaattgtcacttat--aATATTACTATACAAggccaggcacaa-----cggctcgtgcctgtagtcctagcactttgggaggccaaggcgacaggatggcttgagccccagagttcaagaccagcctgggcaacatggcaacaccccatctctac-aaaaaatac-aaaaattagctgggcgtgatggtgcgtacctctagcgtgctgac----------------------------------acacaggaggattgcttcagcctgggaggttgagtctgcagtgagccgagattgtgccactgcactccagcctagatggtagaatgagaccctgtcttaaatagtaataataa
  77. i rheMac2.chr10 C 0 C 0
  78. s hg18.chr22 16066508 390 + 49691432 agtaacctcaggggggcactctgtagacatttctgtg-accaaattaattgtcacttat--aatattactatacaatgccaggcacaATGGCTCggctcatgcctgtagtcctagcactttgggaggccaaggtgagaggacggcttgagccgcagagttcaagaccagcctgggcaacacggcaaaaccccatctc-ac-aaaaaatac-aaaaattagctgggcatgatggtgcacacctctagtgtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattgtgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAA
  79. i hg18.chr22 C 0 C 0
  80. s calJac1.Contig6986 125582 350 - 144597 --------------aGCACTCTGTAGACATTTCTGTGAATCAAACTAATGGTCACTTATAAAATATTACTATACAAggccaggtacga-----tggctcatctttgtagtcctagcactttgggaggccaaggcgagaggacggcttgagcccaggagttcaggaccaggctgagcaacatggcaaaaccccatctctac-aaaaaatac-gaaaattagctgggcgtcatgctgcacacctctag----------------------tcccagttactctgagggctgacac--gaagattgcttcatcctgggaggttgaggctgcagtgagccgacattgtgccactgcgctccagcccagatgatagaattagaccctgtcttaaaTGG------TA-
  81. i calJac1.Contig6986 I 5892 I 1
  82. a score=44055.0
  83. s ponAbe2.chr22 13767877 56 + 46535552 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGGTTTTCAAG
  84. s panTro2.chr22 16075718 53 + 50165558 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGATTTTC---
  85. i panTro2.chr22 C 0 C 0
  86. s rheMac2.chr10 61852562 56 + 94855758 taataataataataCTATACAAGTCTGTTAGGAAGTTGCTCCAACAGGTTTTCAAG
  87. i rheMac2.chr10 C 0 C 0
  88. s hg18.chr22 16066898 56 + 49691432 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGATTTTCAAG
  89. i hg18.chr22 C 0 C 0
  90. s calJac1.Contig6986 125933 56 - 144597 TAATAGTAATGATACTATACAAGTCTGTTAGGAAATTGCTCCATCACGTTTTCAAG
  91. i calJac1.Contig6986 I 1 I 315
  92. a score=223423.0
  93. s ponAbe2.chr22 13767933 295 + 46535552 AAGATTTATCTTCCAGCTAGGTTGTCATCACTTCAGAGCTAGGAACTTGTATTCTCTCTGGTCTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTggctaggcacggtcactcatgcctgtaatcccagcact--------------------------------------------------------ttgggaggctgagatgggcagatcacctaaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtctctactaaaaatacaaaaattagccaggcgtggtggcacatgtctgtaatcccagctactcagaaagctga
  94. s panTro2.chr22 16075771 295 + 50165558 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTCTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTGACTAggcacggtcactcatgcctgtaatctcagcact--------------------------------------------------------ttgggaggccgagatgggcagatctcctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----acctgtctctactaaaaatacaaaaattagccaggcatggtggcacatgtctgtaatcccagctactcagaaagctga
  95. i panTro2.chr22 C 0 C 0
  96. s rheMac2.chr10 61852618 286 + 94855758 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTTTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAACAGTGTTGCTggcgaggcgcggtcactcacacctgtaatcccagcact--------------------------------------------------------ttcggaggccgagatgcacagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtttctactaaaaatacaa---------aggcgtggtggcacatgtctgtaaccccagctactcagaaggctga
  97. i rheMac2.chr10 C 0 C 0
  98. s hg18.chr22 16066954 295 + 49691432 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTTTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTGACTAggcatggtcactcatgcctgtaatctcagcact--------------------------------------------------------ttgggaggccaagatgggcagatctcctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtctctactaaaaatacaaaaattagccaggcatggtggcacatgtctgtaatcccagctactcagaaagctga
  99. i hg18.chr22 C 0 C 0
  100. s calJac1.Contig6986 126304 352 - 144597 aagaTTCATCTTCCAGCAAGATCGTCACCACTTCAGATCTAGGAACTTTTATTCGCTCTGGTCTTACTGAGCATCAGACAAATCTCATTTGCT---GCCATAGAGTTGCTggccaggcgcagcgtctcacgcccgtaatcccagcactttgggaggccgaggtgggggccgggctcagcggctcacgcccgtaatcccagcacgttgggaggccgaggtgggtggattaactgaagtcaggagttcaggaccagcctgatcaagagactgaaaccctccctgtttctactgaaaatacaaagattagccatgcatggtggtacatgcctgtaatcccagctactcagatggctga
  101. i calJac1.Contig6986 I 315 I 1658
  102. a score=39158.0
  103. s ponAbe2.chr22 13770129 48 + 46535552 aaaaaaaCagccgggcacggtggctcactcctgtaaccccagcacttt
  104. s hg18.chr22 16069025 48 + 49691432 aaaaaaaCagctgggcacagtggctcactcctgtaaccccagcacttt
  105. i hg18.chr22 C 0 I 351
  106. s panTro2.chr22 16077844 48 + 50165558 aaaaaaaCagctgggcacagtggctcactcctgtaaccccagcacttt
  107. i panTro2.chr22 C 0 I 345
  108. s rheMac2.chr10 61854937 48 + 94855758 AAGAAAACagccaggcatggtggctcgctcctgtaaccccagcacttt
  109. i rheMac2.chr10 C 0 I 351
  110. s calJac1.Contig6986 128314 48 - 144597 TAAAAATCggctgggcacagtggctcacccctgtaatcccagcacttt
  111. i calJac1.Contig6986 I 1658 I 944
  112. a score=210038.0
  113. s ponAbe2.chr22 13770841 304 + 46535552 gctcacacctgtaatctcagcactttgcgaggccgaggagtgaagattacatgagctcaggagttggagatcagcctgccccacattgtgacaccccgtctataccaaacgtacaaaaa----------------ttatccacgcgtggtggtgcatgcctgtaatcccagctactcaggagcctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatagcaccagtgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaatttttttaat-aaaagaaaaaaaTTAAC
  114. s hg18.chr22 16069424 303 + 49691432 gctcacacctgtaatcccagcactttgggaggccgaggagtgtggattgcctgagctcaggtgttcgagatcagcctggccaacatggtgaaaccccgtctctactaaaagtacaaaaa----------------ttatccaggtgtggtggttcatgcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcacaccagtgcacttcagcctgggcaacagagtgagactctgtctcaaaaaaaattttttttaat--aaaaaaaaaaaTTAAC
  115. i hg18.chr22 I 351 C 0
  116. s panTro2.chr22 16078237 301 + 50165558 gctcacacctgtaatcccagcactttgagaggccgaggagtgtggattgcctgagctcaggtgttcgagatcagcctggccaacatggtgaaaccccgtctctactgaaagtacaaaaa----------------ttatccaggtgtggtggttcatgcacgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcacaccagtgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaatttttttaat----aaaaaaaaaTTAAC
  117. i panTro2.chr22 I 345 C 0
  118. s rheMac2.chr10 61855336 303 + 94855758 gctcacacctgtaatcccagcactttgggaggccgaggtgggtggattgcctgagctcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaa----------------tcacctaggtgtgatggtgcatgcctgtaatcccagctactcaggagactgaggcaggagaatcacttgaacccaagaggcagaggttgcagtgagccgagatagcaccagtgcactccagcctgggcgacagagtgagactctgtctcaaaaaaaattttttttaat--ttaaaaaaaaaaaaac
  119. i rheMac2.chr10 I 351 C 0
  120. s calJac1.Contig6986 129306 311 - 144597 gctcaagcctgtaatcccagcactttgggaggccgagatgggtggatcacacag--tcaagagatcaagaccatcctggccaacatggagaaaccccgtctttactaaaaatacaaaaaaaaaaaaaaaaaaaatttagccaggcatggtggcacgtgcctgtggtcccagctactcgggaggctgaggtggaagaatcacttgaacccaggaggtggacgttgcagtgagccgagactgtgccaccgcactccagcct-ggtgacagagcaagaatccatctcaaaaaaaaa-------aaccaaaaaacaaaaaTTAGC
  121. i calJac1.Contig6986 I 944 C 0
  122. a score=195144.0
  123. s ponAbe2.chr22 13771276 279 + 46535552 caggtacaccaccacccctggctaTTTATATGTGCAGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTATATCCTATGTGGTAGCTTAACCCCTG--------------------------GGAAAACTATAAAGGGAA-AGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTTTGGTTTCCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGGAGAACAGCTGAGGGAGG
  124. s calJac1.Contig6986 129617 291 - 144597 CAGGCAT-----------------------------GGATGCTAATTATTTCATCATTCATGGAGGTGTGTTTATACCA-TCCAGGATGCTATATCATATTAT---------GGTAGCTTAGCCCCTGGGAAAGGCGTAGAAGAAAGATTGTAAGGAAAGCTATGAAGGGAATAGCACAGTCTCAAGGCTGGATGCTTTTCCAACTTTTCCAGGGAAGACCAGGAATATTCAGGCCCATCCTGATTGTC-GCAAGTCCCCTA---------GGTCTTGGTTTCTGACACCCTTCTCCTAGTCTACCCGTAAGGACAGCGGAGCAGAGCGGCTGAGTGAGG
  125. i calJac1.Contig6986 C 0 C 0
  126. s rheMac2.chr10 61855767 314 + 94855758 caggtgcaccaccgctcctggctatttatatGTGCAGGATGCTGATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCGTATTGTATCCTATGCGGTAGCTTAGCCCCTG--------------------------GGAAAACTATGAAGGGAATAGCAAAGTCTCAGGGTTGGATGCTTTTCCAACTTTTCCAGGGAAGACCAGGAATATTCAGGCCAATCATGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTCTGGTTTCCAACACCCTTTACCTAGTCTACCTAAAAGGACAGAGGAGCAGAGCAGCCGAGTGAGG
  127. i rheMac2.chr10 C 0 C 0
  128. s panTro2.chr22 16078669 280 + 50165558 caggtgcaccaccacccctggctatttatatGTGCAGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTGTATCCTATGTGGTAGCTTAGCCCCTG--------------------------GGAAAACTAAAAAGGGAATAGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAAGAAGCAGGGGTTTTGGTTTTCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGCAGAACAGCTGAGTGAGG
  129. i panTro2.chr22 C 0 C 0
  130. s hg18.chr22 16069858 280 + 49691432 caggtgcaccaccacccctggctatttatatGTGCGGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTGTATCCTATGTGGTAGCTTAGCCCCTG--------------------------GGAAAACTAAAAAGGGAATAGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTTTGGTTTTCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGCAGAACAGCTGAGTGAGG
  131. i hg18.chr22 C 0 C 0
  132. a score=43910.0
  133. s ponAbe2.chr22 13771555 56 + 46535552 CTTTCTCTGCTCCATCTAGAATAGCAACAGCCACAAGCACAGTAATAGCCCCAAGA
  134. s hg18.chr22 16070138 56 + 49691432 CTTTCTCTGCTCCATCTAGAATAGCAACAGCCACAAGCACAGTAATAGCCCCAAGA
  135. i hg18.chr22 C 0 C 0
  136. s panTro2.chr22 16078949 56 + 50165558 CTTTCTCTGCTCCACCTAGAATAGCAACAGCCGCAAGCACAGTAATAGCCCCAAGA
  137. i panTro2.chr22 C 0 C 0
  138. s rheMac2.chr10 61856081 56 + 94855758 CTTTCTCTGCTCCACCTAGAATAGCAACAGCCGCAAGCACAGTAGTAGCCCCAAGA
  139. i rheMac2.chr10 C 0 C 0
  140. s calJac1.Contig6986 129908 55 - 144597 -TCTCTGTGCTCTGTCTAAAATAGAAACAGCTACAAGCACGACAGCAGCTCCGAGA
  141. i calJac1.Contig6986 C 0 I 7490
  142. a score=1046331.0
  143. s ponAbe2.chr22 13794262 1386 + 46535552 aagaacttgaaaatcactgcctctaagaagCTAACAGTGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGTTTTTTGGCTGTTGAGATGCTGATAAGGTGACCTTGGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGCTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTGTAAGGGGCAAACTGAAAAGTAAGACTGAGGCCTGCAGCAACTCGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTAGATTGCAACACTCATTAAATATTTGCTAAAAAGTTgctcacagttagtgagcacttactatgtgctggacactggactagagtgcgtggtctacgccatctcatgcggtcctcaggacaactctgtgagggagatgatctgcccatt--------------ttatagatgcagaagtccaggACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCTCATGGCTCTGTTCCACTGTCTTCCTTGTTGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTT-TGGGAATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTTAGTT--TATCTCTGTCCTCATATTGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctattcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagaaaatgaggaggagttagcggatatcttccacatctcccaccccaaacctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccgcgattgcaacccaatgcaaggtcccatcatcccgcagctgctcacttcagcagcttctacttttgtcccctttccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccactacacagtgagtaaaatgcaagctcttttccttggcctgctgggccAGCCTCATCATGGGCCTGGGgaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtagcctctcaagtgaggaggcccttcacttccaaggcactgctgtgctatccgctttacaggcgagctccttccc----------------------------ctccttgacc--------------agtgcag
  144. s hg18.chr22 16089475 1362 + 49691432 aagaacttgaaaatcactgcctctaagaagCTAACAATGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGCTTTTTGGCTGATAA--------------------GGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGCTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGGCTTGCAGCAACTTGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTCGATTGCAACACTCGTTAAATATTTGCTCAAAAGTTgctcacagttagtgggcacttactatgtgctgggcactggactaaaggtcgtggtctacgccatctcatgcggtcctcaggacaattctgtgaggtaggtgatctgcccatt--------------ttacagatgcagaaGTCCAGGACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCCCATGGCTCTGTTCCA--GTCTTCCTTGTTGCTTCTCCCTGCTGAATTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTT-TGGGAATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTGAGTT--TGTCTCTGTCCTCATATTGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctgttcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagaaaatgaggaggagttagcggatatcttccacatctcccaccccaaatctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccacagttgcaacccaatgcaaggccccatcatccctcagctgctcacttcagcagcttctacttttgtcccctttccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccactacacagtgagcaaaatgcaagctctttttcttggcctgctgggccagccttatc--tggcctggagaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtggcctctcaagtgagggggcccttcacttccaaggcgctgctgtgcaatcccctttacgggggagctccttccc----------------------------ctccttgact--------------agtgcag
  145. i hg18.chr22 C 0 C 0
  146. s panTro2.chr22 16100440 1396 + 50165558 aagaacttgaaaatcactgcctctaagaagCTAACAATGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGCTTTTTGGCTGTTGAGATGCTGATAAGGTGACCTTGGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGGTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGGCCTGCAGCAACTCGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTCGATTGCAACACTCATTAAATATTTGCTCAAAAGTTgctcacagttagtgagcacttactatgtgctggacactggactaaaggtcgtggtctacgccatctcatgcggtcctcaggacaactctgtgaggtaggtgatctgcccattttatagatgcagaattatagatgcagaAGTCCAGGACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCCCATGGTTCTGTTCCA--GTCTTCCTTGTGGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCGTTTTT-TGGGAATGCAAATGCTCAAACATACACTCAGTGAGAGAGGAGCTGGTGAGTT--TGTCTCTGTCCTCATATTGTGACAGGGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctgttcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagcaaatgaggaggagttagcgggtatcttccacatctcccaccccaaatctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccacagttgcaacccaatgcaaggccccattatccctcagctgctcacttcagcagcttctacttttgtcccgtctccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccaccacacagtgagtaaaatgcaagctctttttcttggcctgctgggccagccttatc--tggcctggagaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtggcctctcaagtgagggggcccttcacttccaaggcactgccgtgcaatcccctttacgggggagctccttccc----------------------------ctccttgacc--------------agtgcag
  147. i panTro2.chr22 C 0 C 0
  148. s rheMac2.chr10 61887207 1386 + 94855758 aaagaCTTGAAAATCACTGCCTCTAAAAGGCTAAGAATGTTTGGCGTTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGGGCACAGCCTCAGTTACGGGCCTTCCTCCTGTGTTTTGGCTGTTGAGCTGCTGCTAAGGTGACGTTGGAGCAGAATGGAGAAATGAACGATGCCATACACAAACCACAGATGCTACACCGGAGCAGAGTCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCACGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGACCCGCAGCAACTCATAACCCTTGAAGCTATTTGCTCCCTGTCCGGCTT-CCCATTAGATTGCAGCGCTCATTAAATATTTGCTCAAAAGTTGCACAcagttagtgagcacttaccacgtgctggacactggactaaagtgcgtggtctacaccatctcatgcggtcctcaggacaactctgtgagggaggtgatctgcccatt--------------ttacagatgcggaaGTCCAGTACCCACTAAGTAAAATATTGGAAGCGGGGAGGCAGTCTTGGGGCCATGCTGTCCATGGCTCTGTTCCACTGTCTTCCTTGTTGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTA-TTTAGATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTGAGTTTATGTCTCTCTCCTCATATGGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgagttttccactttccctccccacaaaagctgttctgcttccaactttccccttcccagtgagtggcacctccatccacctagttgcttctgccagaaacctgatttccactctagaaaat---gaggagttagctgatatcttccacatctcccaccccaaacctccaccaggccctgcctgtcgtcccccatgtttacccttcaacctgcccactccttccatctccacaactg-aaaccaatgcaaggccccatcatccctcagctgcccatttcagcagcttctacttttgtcccctttccattaattttccactctgtagatctaaaaacacaaatttcagcatgcccttcatgttccttcctgctaaaaacctttcaaagtctacccactacacagtgagtaaaatgcaagttctttttcttggcctgctgggccagcctcatc--tggcctggggaccatgtctccaccctctccccca-ttcccgacccgctggccggccttcctgtgccctcaaaagtgagggggtccttcgcttccaaggcattgccatgcaatcccctttacggggcagctccttccc----------------------------cTCCTTGACC---------------------
  149. i rheMac2.chr10 I 30626 C 0
  150. s calJac1.Contig5889 56093 1410 + 156393 aagaaagagaaag---------CAAGCAAGCTAAGACTGGTTGGCATGGGGATCAACTCTTGGGAACCTGACTC--TAAACGATGAGTGTGAGTGCACAGCCCCAGCGAGGAGCCTTCTTTCTGTTTTTTGGCTGTTGAGCTGCTGATAAGGTAAACTTGGAGCAGAATAAAGAAATGAACACTGTCACACACAAACCACAGATGCTACACCTGAGCGGAGCCCAGCAGATCATCACTAACCCAGGAGGGGAGAACACTTGACTTCATGACTCTAAGGGGCAGACTGTAAAGTAAGATTGACTACTTCAGCAACTCGTGACTCTTGAAGCCATTTTCTCCCTGTCCATCTTCCCCATTAGAGTGCAACACTCATTAAACATTTGCTCACAAGTTgctttcaatgagtgagcacttactatgcact-gacactggactaaagtgcatggtccacaccgtctcatgtggtcctcaggacaaccctataagggaggtaatctgcccatt--------------ttacagatgtggaaGTCCATTCTCCACTAAG-----TATTGCAACCAGACAGGCAGTCTCAGGGCTGTGCTGCCCATG--TCTGTTTCACTGTCTTCCTTGTCTCTTCCCCCTGCTGAATTCCCAGAAGCTGCCAAAAAAATATTTTTTTTGATTGTCCTTTTTTGTCGGAATGCAAATGTTCAAACATACGTTGGGTGAGAGAGGAGCTGGTGAGTTTATGTCTCTCTCCTCATGTCATGACAGTGAACATGCAAACATTGAGATTTCAAACTCAACTTGG-CCACATTGACTTTTCTACCTTCCCTCCCCACAAAATCTGGTGTTATTCCAAC--TCCACTTCTCAGTGAGTGGCACCTCCATCCACCCAGTGGTTTCTGCCATAAACCTGATTTCCATTCTAGAAAATGAGGAGGAGTTAGCTGATACTTTCTGCATCTCCCACACAA------CAGCGGGCCCTGACTGTGGTGTCCCATGTTTACCCTTCAGCCTGCCCACTCCTTCCATCTCCACAATGGCAACCCAGCACAAGACTCCATCGTCCCCCAGCCACTCACTTCAGTAGTTTCTACTTTTGACCCCTTTTGATTAATCTTTTACTCTGCA-ATCTAAAAGCACAAATCTCAGCATGCCCCTCATGCTCCTTTCTGCTGAAAACCTTTCAAAGTCTACCCACAACACAGCAAGTAAAATGCAAGCTCTTTTTCTGGGCCTGCTAGGCCAGCCTTATC--TGGCCTGGGAACCATGTCTCCATCACCTCCTCCAGCTCCTGACCGGCTGGCCAGCCTTTCTGTGGCC-CTCAAGTGAGGGG--CCTTCActtccaaggctttgacatgcaatcccctttgccagaagcttctttcccctttccttttttttgagacagagtctcactccatcaccaggcaccagactggagtgcag
  151. i calJac1.Contig5889 C 0 I 198
  152. a score=81430.0
  153. s ponAbe2.chr22 13795648 146 + 46535552 ctcccacccatccttcagatcccaacggaaatg--tgtcttcctggggagggcttcagggaacacccctataggaagttagc------------cccagttccagtcttcacaatacccttttatcttcttcctcaacatgtatcacagcttgtgatttt
  154. s hg18.chr22 16090837 146 + 49691432 ctcccacccatccttgagatcccgatggaaatg--tgtcttcctggggagggcttcAGGGAACACCCCTATAGGAAGTTAGC------------CCCGGTTCCACTCTTCACAATACCCTTTTATCTTCTTCCACAACATGTATCACAGCTTGTGATTTT
  155. i hg18.chr22 C 0 C 0
  156. s panTro2.chr22 16101836 146 + 50165558 ctcccacccatccttcagatcccgatggaaatg--tgtcttcctggggagggcttcAGGGAACACCCCTATAGGAAGTTAGC------------CCTGCTTCCACTCTTCACAATACCCTTTTATCTTCTTCCACAACATGTATCACAGCTTGTGATTTT
  157. i panTro2.chr22 C 0 C 0
  158. s rheMac2.chr10 61888593 115 + 94855758 ------------------------------ATG--TGTCTTCCTGGGGAGGGCTTCAGGGAACACCCCTATAGGAAGTTAGC------------CCCGGTTCCACTCTTCACAATACCCTTTTATCTTCTCCCACCACATGTATC-CAGTTTGTGATTTT
  159. i rheMac2.chr10 C 0 C 0
  160. s calJac1.Contig5889 57770 159 + 156393 ttcctgcccatccttgagatccagatgaaaagggtttttttctcagggaaggcttcAGGGAATGCCCCGTTTGAAAGGCAGCCCTGGCTGCACTCCCAGTTCCACTCCT-ATGATACCGTTTTCTCTTCTTCCACAACTTGCATCACAGTTTGTGATTTT
  161. i calJac1.Contig5889 I 198 I 689
  162. a score=389155.0
  163. s ponAbe2.chr22 13795794 506 + 46535552 gtattcatggatttctatgactgttcgtttcatatatatttgcatagtggatggaaagctgttgtttaccttggggtcttcatagtgccaggctcagaggaaggacccaaacgtctgctgTGGGAAGGCACACATGATTGAAAGTATGGAGGAAAAGAGTGGATGTCTGGGTGTATGAGCGTTTGTTAGACATTCAGGTCTCCTCAACCTGGTGTAACAGAGAAGAGGCAAATG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAGTCAGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccactggccaaaacttgtcataaatagatgagcctacaatgccaggagtgtacacagtgcctcctggaatcgggcagcactccacttgtgcaaTCACACCACAATCTTGGAGATCACGATAAATGCCAACAGCAAATGGATAAGCCTGGGCGAGGTCTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTCttttttttctttctt-------tt
  164. s hg18.chr22 16090983 510 + 49691432 GTATTCATAGATTTCTATGACTGTTCGTTTCATATATATTCGCATAGCAGATGGAAAGCTGTTGTTTACCTTGGGGTCTTCATAGTGCCAGGCTCAGAGGAAGGACCCAAACGTCTGCTGCGGGAAGGCACGCATGATTGAAAGTATGGAGGAAAAGAGCGGGTGTTTGGGTGTATGAGTGTTTGTTAGACATTTAGGTCTCCTCAACCTGGTGTAACACAGAAGAGGCAAATG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAATCAGCCCAGCCATTCGCTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacagtgcctcctggaatcgggcagcactctacttgtgcaatcatacCACAATCTTAGAGATCATGATAAATGCCAACAGCAAATGGATAAGCCTGGGCAAGTTCTTCTTGTTTGTTTGCATTTAGCTCTTCAttttcttttttttcttttcttttc---tt
  165. i hg18.chr22 C 0 C 0
  166. s panTro2.chr22 16101982 513 + 50165558 GTATTCATAGATTTCTATGGCTGTTCGTTTCACATATATTCGCATAGCAGATGGAAAGCTGTTGTTTACCCTGGGGTCTTCATAATGCCAGGCTCAGAGGAAGGACCCAAACGTCTGCTGCGGGAAGGCACACATGATTGAAAGTATGGAGGAAAAGAGTGGGTGTTTGGGTGTATGAGTGTTTGTTAGACATTTAGTTCTCCTCAACCTGGTGTAACAGGGAAGAGGCAATTG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAATCAGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacagtgcctcctggaatcgggcagcactctacttgtgcaatcatacCACAATCTTAGAGATCATGATAAATGCCAACAGCAAATGGATAAGCCTGGGCAAGGTCTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTCTTTTTTttcttttcttttcttttt
  167. i panTro2.chr22 C 0 C 0
  168. s rheMac2.chr10 61888708 511 + 94855758 GTATTCATAGATTTCTATGACTGTTCGTCTCATATCTATTCCCATAGCAGATGGAAAGCTGTTGTTTACCTTAGGGTCTTCATAGTGCCAGGTTCAGAGGAAGGACCCAAATGTCTGCTGTGGGAAGGCACGCATGATTGAAAGTATGGAGGAAAAGAGTGGGTGTTTGGGTGTGTGGGTGTTTGTTAGACATTTAGGTCTCCTCAACCTGGTATAAGAGAGAAGAGGCAAATATACAC---GGTGCCTTGCAAGGAGTGGCCAGTCGGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacggtgcctcctggaatcgggcagcattccacttgtgcaaTCACACCACAATCTTGGAGAGCATGATAAATGCCAACAGCACATGGATAAGCCTGGGCGAGGTTTTCTTGTTTGTTTGCATTCAACTCTTCACTTTCTTTTTTTTCCttttttctttcttt
  169. i rheMac2.chr10 C 0 I 300
  170. s calJac1.Contig6986 137453 503 - 144597 GTGTTCATAGATGTCTATGACCTTTCATTCCGTATACATTCCCATAGCAGATGGAGAGCTGCTGTTTACCGCGGGGTCTTCATAGTGCCAGACTCAGACCAAGGACCCAAACGTCTGCCGTGGGAAGGCGCGCCTGATTGAAAGTGTGGAGAAAAACAGTAGGTATTTGGGTGTGTGGG----TGTTGGACATTTGGGTCTCCTCAACCTGGTGTCACAAGGAAGAGGCAGATG-ACGCCA-GGTGTCTTGAAAGGAATGGCCAGTTAGCTCAGCCGTTCACTGTATGGCTTCTTCGTGtgccattggctgacaattgtcataaacagataagtctaaaatgctggcagtgtgcacagtgcctcccggacctgggcagccctccacctgtgcaatcacactgcggctctgGAGATCATGACAAATGCCAACAGCACATGGATGAGCCTGGGAGAGGCTTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTAtttatttatttttaattt------
  171. i calJac1.Contig6986 I 7490 C 0
  172. a score=210330.0
  173. s ponAbe2.chr22 13796300 325 + 46535552 ttttttttttttgagacaaagtttcactcttgttgctcaggctggagtgtaatggcacgatctcagctcactgcaacctccgcctcctgggttcaaagtgattctcctgcctcagcctcccgcgtaggtgggattacaggcatgtgccaccacgcccggctaatt--ttgc-atttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattaca-ggcatgagccactgcacctggc----tTTTTAAAtttttttattttttatttttatt
  174. s hg18.chr22 16091493 325 + 49691432 ttttttttttttgagacaaagtttcactcttgttgcccaggctggagtgtaatggcacgatctcagctcactgcaacctccgtctcctgggttcaaagcaattctcctgcctcggcctcccgcgtagctggtattatagccatgcgccaccacgcctggctaatt--ttgc-attttcagtagagatggggtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattata-ggcatgagtcaccgcacccggc----tTTTTAAAtttttttattttttacttttatt
  175. i hg18.chr22 C 0 C 0
  176. s panTro2.chr22 16102495 325 + 50165558 ttttttttttttgagacgaagtttcactcttgttgcccaggctggagtgtaatggcacgatctcagctcactgcaacctccgtctcctgggttcaaagcaattctcctgcctcggcctcccgcgtagctgggattacagccatgcgccaccacgcccggctaatt--ttgc-attttcagtagagatggggtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattata-ggcatgagtcaccgcaccgggc----tTTTTAAAtttttttattttttatttttatt
  177. i panTro2.chr22 C 0 C 0
  178. s rheMac2.chr10 61889519 304 + 94855758 tttttttttttttagatggagtcttgctc-cattgctcaggctggagtgcaatggcacaatctcgg--------------------ctgagtc--aagcaattct-ctgactcagcctcccaagtagctggaattacaggtgcctgccaccacatcgggctaatt--tttctatttttagtagagatggtgtttcaccatcttggccaggctggtcttgaactcctgacctt--gtgatccacccaccttgacctcccaaagtgctgggattaca-ggcatgagccaccgcgcccagccTAGCTCTTCAttttcttttttttttttttttttt
  179. i rheMac2.chr10 I 300 C 0
  180. s calJac1.Contig6986 137956 318 - 144597 ttttttttttttgagacagagtttcgtgcttgttacccaggctggagtgcaatggcgtgatctcggctcacggcaacctccgcctcctgggttc-aggcaattctcctgcctcagcctcccgagtagctgggactacaggcacgcgccaccgtgcccagctaatttattgt-atttttagtagagacggggtgtcaccatgttgaccaggacggtctcgatctcttgacctc--atgatccacccgcctcagcctcccaaagtgctgggattacagggcgtgagccactgcgcccggc--------cAATTTTCTTTATTCATTCCTATT---
  181. i calJac1.Contig6986 C 0 M 888
  182. a score=320686.0
  183. s ponAbe2.chr22 13796625 431 + 46535552 ttttagatggagtctcactctgtcacccaggctggagtgcaatggcgcaatctcggctcactgcaacctctgccttccaggttcaagcaattct-ctgactcagcctcccgagtagctgggattataggcacccaccaccacaccgggcgaatttttc-tattttttagtagagat-ggggtttcatcatcttggccaggctggtcttgaactcctgaccttgtgatccactcaccttggcctcccaaagtgctgggattacaggcattagccactgcgcccggccTAGCTCGTCATTTTCAGTGCAACACTGAAACACCCCTAGGGATCAAGCCCAAGCCACTTGCCT-CCATTTTTCTGTTTCTCGTCTCCCACACACtctttttttgttttttttgagacgggagtctcgctctgtcacccaggctggagtg
  184. s hg18.chr22 16091818 432 + 49691432 ttttagatggagtc