PageRenderTime 82ms CodeModel.GetById 20ms app.highlight 20ms RepoModel.GetById 2ms app.codeStats 1ms

/test-data/lastz_maf.txt

https://bitbucket.org/cistrome/cistrome-harvard/
Plain Text | 1982 lines | 1490 code | 492 blank | 0 comment | 0 complexity | a3b57d3335164ec3f7a03698f626f58f MD5 | raw file

Large files files are truncated, but you can click here to view the full file

   1##maf version=1 scoring=lastz.v1.00.23
   2# lastz.v1.00.23 --yasra95short --ambiguousn --identity=0..100 --census=/Users/anton/galaxy_central/database/files/000/dataset_128.dat --coverage=0 --format=maf 
   3#
   4# hsp_threshold      = 10
   5# gapped_threshold   = 14
   6# x_drop             = 10
   7# y_drop             = 14
   8# gap_open_penalty   = 6
   9# gap_extend_penalty = 1
  10#        A    C    G    T
  11#   A    1   -7   -7   -7
  12#   C   -7    1   -7   -7
  13#   G   -7   -7    1   -7
  14#   T   -7   -7   -7    1
  15a score=35
  16s phiX 4294 35 + 5386 CCCCCAACTTGATATTAATAACACTATAGACCACC
  17s read    1 35 -   36 CCCCCAACTTGATATTAATAACACTATAGACCACC
  18
  19a score=36
  20s phiX 3521 36 + 5386 ATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGC
  21s read    0 36 -   36 ATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGC
  22
  23a score=36
  24s phiX 228 36 + 5386 GATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC
  25s read   0 36 +   36 GATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC
  26
  27a score=36
  28s phiX 2070 36 + 5386 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
  29s read    0 36 +   36 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
  30
  31a score=35
  32s phiX 1066 35 + 5386 GGTCAGATTGGTCGTCTTATTACCATTTCAACTAC
  33s read    1 35 -   36 GGTCAGATTGGTCGTCTTATTACCATTTCAACTAC
  34
  35a score=36
  36s phiX 1787 36 + 5386 GTCGTGTTCAACAGACCTATAAACATTCTGTGCCGC
  37s read    0 36 +   36 GTCGTGTTCAACAGACCTATAAACATTCTGTGCCGC
  38
  39a score=36
  40s phiX 1192 36 + 5386 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
  41s read    0 36 +   36 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
  42
  43a score=33
  44s phiX 4562 33 + 5386 GGTTGGTTTATCGTTTTTGACACTCTCACGTTG
  45s read    0 33 +   36 GGTTGGTTTATCGTTTTTGACACTCTCACGTTG
  46
  47a score=36
  48s phiX 2667 36 + 5386 GTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTC
  49s read    0 36 +   36 GTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTC
  50
  51a score=36
  52s phiX 4247 36 + 5386 GTTACTGAGAAGTTAATGGATGAATTGGCACAATGC
  53s read    0 36 +   36 GTTACTGAGAAGTTAATGGATGAATTGGCACAATGC
  54
  55a score=36
  56s phiX 2862 36 + 5386 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
  57s read    0 36 +   36 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
  58
  59a score=36
  60s phiX 2556 36 + 5386 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
  61s read    0 36 +   36 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
  62
  63a score=34
  64s phiX 2510 34 + 5386 GTCAACGTTATATTTTGATAGTTTGACGGTTAAT
  65s read    0 34 +   36 GTCAACGTTATATTTTGATAGTTTGACGGTTAAT
  66
  67a score=36
  68s phiX 5151 36 + 5386 GGATGAAAATGCTCACAATGACAAATCTGTCCACGG
  69s read    0 36 +   36 GGATGAAAATGCTCACAATGACAAATCTGTCCACGG
  70
  71a score=36
  72s phiX 1589 36 + 5386 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
  73s read    0 36 -   36 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
  74
  75a score=36
  76s phiX 4883 36 + 5386 GGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG
  77s read    0 36 +   36 GGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG
  78
  79a score=36
  80s phiX 5051 36 + 5386 GCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCA
  81s read    0 36 +   36 GCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCA
  82
  83a score=36
  84s phiX 4908 36 + 5386 GCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGT
  85s read    0 36 +   36 GCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGT
  86
  87a score=36
  88s phiX 2862 36 + 5386 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
  89s read    0 36 +   36 GGATTGGTTTCGCTGAATCAGGTTATTAAAGAGATT
  90
  91a score=30
  92s phiX 4172 30 + 5386 GTTGAGTTCGATAATGGTGATATGTATGTT
  93s read    0 30 +   36 GTTGAGTTCGATAATGGTGATATGTATGTT
  94
  95a score=36
  96s phiX 1700 36 + 5386 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCAT
  97s read    0 36 +   36 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCAT
  98
  99a score=36
 100s phiX 1682 36 + 5386 CTTATGACGCTGACAACCGTCCTTTACTTGTCATGC
 101s read    0 36 -   36 CTTATGACGCTGACAACCGTCCTTTACTTGTCATGC
 102
 103a score=35
 104s phiX 3125 35 + 5386 GAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGC
 105s read    1 35 -   36 GAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGC
 106
 107a score=36
 108s phiX 1664 36 + 5386 CATTTGGAGGTAAAACCTCTTATGACGCTGACAACC
 109s read    0 36 -   36 CATTTGGAGGTAAAACCTCTTATGACGCTGACAACC
 110
 111a score=36
 112s phiX 3212 36 + 5386 GTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGT
 113s read    0 36 +   36 GTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGT
 114
 115a score=36
 116s phiX 3419 36 + 5386 GAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAG
 117s read    0 36 +   36 GAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAG
 118
 119a score=36
 120s phiX 512 36 + 5386 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGC
 121s read   0 36 +   36 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGC
 122
 123a score=33
 124s phiX 2881 33 + 5386 AGGTTATTAAAGAGATTATTTGTCTCCAGCCAC
 125s read    3 33 -   36 AGGTTATTAAAGAGATTATTTGTCTCCAGCCAC
 126
 127a score=36
 128s phiX 4470 36 + 5386 GTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGC
 129s read    0 36 +   36 GTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGC
 130
 131a score=36
 132s phiX 1228 36 + 5386 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGAT
 133s read    0 36 +   36 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGAT
 134
 135a score=36
 136s phiX 614 36 + 5386 GAGTTTATTGCTGCCGTCATTGCTTATTATGTTCAT
 137s read   0 36 +   36 GAGTTTATTGCTGCCGTCATTGCTTATTATGTTCAT
 138
 139a score=36
 140s phiX 256 36 + 5386 GCACGTTCGTCAAGGACTGGTTTAGATATGAGTCAC
 141s read   0 36 -   36 GCACGTTCGTCAAGGACTGGTTTAGATATGAGTCAC
 142
 143a score=36
 144s phiX 2380 36 + 5386 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTC
 145s read    0 36 -   36 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTC
 146
 147a score=36
 148s phiX 4097 36 + 5386 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC
 149s read    0 36 -   36 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC
 150
 151a score=36
 152s phiX 5098 36 + 5386 GCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAG
 153s read    0 36 +   36 GCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAG
 154
 155a score=36
 156s phiX 4253 36 + 5386 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
 157s read    0 36 +   36 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
 158
 159a score=36
 160s phiX 3407 36 + 5386 GACAATCAGAAAGAGATTGCCGAGATGCAAAATGAG
 161s read    0 36 +   36 GACAATCAGAAAGAGATTGCCGAGATGCAAAATGAG
 162
 163a score=36
 164s phiX 4042 36 + 5386 GGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTC
 165s read    0 36 -   36 GGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTC
 166
 167a score=36
 168s phiX 4559 36 + 5386 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTG
 169s read    0 36 +   36 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTG
 170
 171a score=36
 172s phiX 1887 36 + 5386 GACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGC
 173s read    0 36 +   36 GACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGC
 174
 175a score=35
 176s phiX 3433 35 + 5386 GCAAAATGAGACTCAAAAAGAGATTGCTGGCATTC
 177s read    1 35 -   36 GCAAAATGAGACTCAAAAAGAGATTGCTGGCATTC
 178
 179a score=36
 180s phiX 4538 36 + 5386 GCAATGCGACAGGCTCATGCTGATGGTTGGTTTATC
 181s read    0 36 +   36 GCAATGCGACAGGCTCATGCTGATGGTTGGTTTATC
 182
 183a score=36
 184s phiX 1827 36 + 5386 CTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGC
 185s read    0 36 -   36 CTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGC
 186
 187a score=36
 188s phiX 3707 36 + 5386 GACTTAGTTCATCAGCAAACGCAGAATCAGCGGTAT
 189s read    0 36 +   36 GACTTAGTTCATCAGCAAACGCAGAATCAGCGGTAT
 190
 191a score=36
 192s phiX 3325 36 + 5386 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGT
 193s read    0 36 +   36 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGT
 194
 195a score=36
 196s phiX 4175 36 + 5386 GAGTTCGATAATGGTGATATGTATGTTGACGGCCAT
 197s read    0 36 +   36 GAGTTCGATAATGGTGATATGTATGTTGACGGCCAT
 198
 199a score=36
 200s phiX 21 36 + 5386 GCAGAAGTTAACACTTTCGGATATTTCTGATGAGTC
 201s read  0 36 +   36 GCAGAAGTTAACACTTTCGGATATTTCTGATGAGTC
 202
 203a score=36
 204s phiX 2556 36 + 5386 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
 205s read    0 36 -   36 GGTTTTCTTCATTGCATTCAGATGGATACATCTGTC
 206
 207a score=36
 208s phiX 3276 36 + 5386 ATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGC
 209s read    0 36 -   36 ATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGC
 210
 211a score=36
 212s phiX 3591 36 + 5386 AGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGC
 213s read    0 36 -   36 AGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGC
 214
 215a score=35
 216s phiX 357 35 + 5386 GATGCTGTTCAACCACTAATAGGTAAGAAATCATG
 217s read   0 35 +   36 GATGCTGTTCAACCACTAATAGGTAAGAAATCATG
 218
 219a score=36
 220s phiX 1774 36 + 5386 GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAA
 221s read    0 36 +   36 GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAA
 222
 223a score=36
 224s phiX 3503 36 + 5386 GTATATGCACAAAATGAGATGCTTGCTTATCAACAG
 225s read    0 36 +   36 GTATATGCACAAAATGAGATGCTTGCTTATCAACAG
 226
 227a score=36
 228s phiX 1553 36 + 5386 CGACTTCTACCACATCTATTGACATTATGGGTCTGC
 229s read    0 36 -   36 CGACTTCTACCACATCTATTGACATTATGGGTCTGC
 230
 231a score=36
 232s phiX 1001 36 + 5386 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC
 233s read    0 36 -   36 TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGC
 234
 235a score=36
 236s phiX 3625 36 + 5386 GCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTAC
 237s read    0 36 -   36 GCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTAC
 238
 239a score=36
 240s phiX 3571 36 + 5386 GGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTC
 241s read    0 36 +   36 GGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTC
 242
 243a score=36
 244s phiX 1264 36 + 5386 GGTGTTAATGCCACTCCTCTCCCGACTGTTAACACT
 245s read    0 36 +   36 GGTGTTAATGCCACTCCTCTCCCGACTGTTAACACT
 246
 247a score=36
 248s phiX 1331 36 + 5386 GCACGATTAACCCTGATACCAATAAAATCCCTAAGC
 249s read    0 36 -   36 GCACGATTAACCCTGATACCAATAAAATCCCTAAGC
 250
 251a score=36
 252s phiX 4253 36 + 5386 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
 253s read    0 36 +   36 GAGAAGTTAATGGATGAATTGGCACAATGCTACAAT
 254
 255a score=36
 256s phiX 4169 36 + 5386 GGCGTTGAGTTCGATAATGGTGATATGTATGTTGAC
 257s read    0 36 -   36 GGCGTTGAGTTCGATAATGGTGATATGTATGTTGAC
 258
 259a score=30
 260s phiX 2811 30 + 5386 GTTTATGTTGGTTTCATGGTTTGGTCTAAC
 261s read    6 30 -   36 GTTTATGTTGGTTTCATGGTTTGGTCTAAC
 262
 263a score=36
 264s phiX 3118 36 + 5386 CCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGC
 265s read    0 36 -   36 CCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGC
 266
 267a score=36
 268s phiX 1669 36 + 5386 GGAGGTAAAACCTCTTATGACGCTGACAACCGTCCT
 269s read    0 36 +   36 GGAGGTAAAACCTCTTATGACGCTGACAACCGTCCT
 270
 271a score=36
 272s phiX 639 36 + 5386 ATTATGTTCATCCCGTCAACATTCAAACGGCCTGTC
 273s read   0 36 -   36 ATTATGTTCATCCCGTCAACATTCAAACGGCCTGTC
 274
 275a score=35
 276s phiX 2749 35 + 5386 GTTATTATACCGTCAAGGACTGTGTGACTATTGAC
 277s read    0 35 +   36 GTTATTATACCGTCAAGGACTGTGTGACTATTGAC
 278
 279a score=36
 280s phiX 4605 36 + 5386 GATTAGAGGCGTTTTATGATAATCCCAATGCTTTGC
 281s read    0 36 -   36 GATTAGAGGCGTTTTATGATAATCCCAATGCTTTGC
 282
 283a score=36
 284s phiX 3572 36 + 5386 GAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC
 285s read    0 36 -   36 GAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC
 286
 287a score=36
 288s phiX 5104 36 + 5386 GCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAG
 289s read    0 36 +   36 GCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAG
 290
 291a score=21
 292s phiX  0 21 + 5386 GAGTTTTATCGCTTCCATGAC
 293s read 15 21 -   36 GAGTTTTATCGCTTCCATGAC
 294
 295a score=36
 296s phiX 1673 36 + 5386 GTAAAACCTCTTATGACGCTGACAACCGTCCTTTAC
 297s read    0 36 -   36 GTAAAACCTCTTATGACGCTGACAACCGTCCTTTAC
 298
 299a score=36
 300s phiX 4094 36 + 5386 CCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
 301s read    0 36 -   36 CCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
 302
 303a score=36
 304s phiX 4550 36 + 5386 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT
 305s read    0 36 +   36 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT
 306
 307a score=36
 308s phiX 3283 36 + 5386 TGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGC
 309s read    0 36 -   36 TGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGC
 310
 311a score=20
 312s phiX 2937 20 + 5386 GTGCTATTGCTGGCGGTATT
 313s read    0 20 +   36 GTGCTATTGCTGGCGGTATT
 314
 315a score=36
 316s phiX 4004 36 + 5386 GAATGTCACGCTGATTATTTTGACTTTGAGCGTATC
 317s read    0 36 +   36 GAATGTCACGCTGATTATTTTGACTTTGAGCGTATC
 318
 319a score=36
 320s phiX 2478 36 + 5386 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
 321s read    0 36 +   36 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
 322
 323a score=36
 324s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
 325s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
 326
 327a score=35
 328s phiX 3044 35 + 5386 GCTACCGATAACAATACTGTAGGCATGGGTGATGC
 329s read    1 35 -   36 GCTACCGATAACAATACTGTAGGCATGGGTGATGC
 330
 331a score=36
 332s phiX 1114 36 + 5386 GGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTC
 333s read    0 36 -   36 GGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTC
 334
 335a score=33
 336s phiX 635 33 + 5386 GCTTATTATGTTCATCCCGTCAACATTCAAACG
 337s read   0 33 +   36 GCTTATTATGTTCATCCCGTCAACATTCAAACG
 338
 339a score=26
 340s phiX 1138 26 + 5386 GTTGGCGCTCTCCGTCTTTCTCCATT
 341s read    0 26 +   36 GTTGGCGCTCTCCGTCTTTCTCCATT
 342
 343a score=36
 344s phiX 851 36 + 5386 CTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTC
 345s read   0 36 -   36 CTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTC
 346
 347a score=36
 348s phiX 5271 36 + 5386 GATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTT
 349s read    0 36 +   36 GATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTT
 350
 351a score=30
 352s phiX 4329 36 + 5386 GCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACG
 353s read    0 36 +   36 GCCCCGAAGGGGACNANAAATGGTTTTTAGAGAACG
 354
 355a score=36
 356s phiX 4890 36 + 5386 GTATGCCCATCGCAGTTCGCTACACGCAGGACGCTT
 357s read    0 36 +   36 GTATGCCCATCGCAGTTCGCTACACGCAGGACGCTT
 358
 359a score=34
 360s phiX 4784 34 + 5386 TTTATGCGGACACTTCCTACAGGTAGCGTTGACC
 361s read    2 34 -   36 TTTATGCGGACACTTCCTACAGGTAGCGTTGACC
 362
 363a score=36
 364s phiX 3618 36 + 5386 GCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGT
 365s read    0 36 +   36 GCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGT
 366
 367a score=32
 368s phiX 4454 32 + 5386 GGTATTAAGGATGAGTGTTCAAGATTGCTGGA
 369s read    0 32 +   36 GGTATTAAGGATGAGTGTTCAAGATTGCTGGA
 370
 371a score=36
 372s phiX 631 36 + 5386 CATTGCTTATTATGTTCATCCCGTCAACATTCAAAC
 373s read   0 36 -   36 CATTGCTTATTATGTTCATCCCGTCAACATTCAAAC
 374
 375a score=35
 376s phiX 2963 35 + 5386 GCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGG
 377s read    0 35 +   36 GCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGG
 378
 379a score=36
 380s phiX 2762 36 + 5386 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTAC
 381s read    0 36 -   36 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTAC
 382
 383a score=36
 384s phiX 2765 36 + 5386 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
 385s read    0 36 -   36 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
 386
 387a score=36
 388s phiX 1718 36 + 5386 GCTCTAATCTCTGGGCATCTGGCTATGATGTTGATG
 389s read    0 36 +   36 GCTCTAATCTCTGGGCATCTGGCTATGATGTTGATG
 390
 391a score=36
 392s phiX 3099 36 + 5386 AAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCC
 393s read    0 36 -   36 AAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCC
 394
 395a score=29
 396s phiX 597 29 + 5386 GCTTTCCTGCTCCTGTTGAGTTTATTGCT
 397s read   0 29 +   36 GCTTTCCTGCTCCTGTTGAGTTTATTGCT
 398
 399a score=36
 400s phiX 4125 36 + 5386 ACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTTTC
 401s read    0 36 -   36 ACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTTTC
 402
 403a score=36
 404s phiX 4025 36 + 5386 GACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATT
 405s read    0 36 +   36 GACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATT
 406
 407a score=36
 408s phiX 2620 36 + 5386 GTGCTGATATTGCTTTTGATGCCGACCCTAAATTTT
 409s read    0 36 +   36 GTGCTGATATTGCTTTTGATGCCGACCCTAAATTTT
 410
 411a score=36
 412s phiX 2748 36 + 5386 GGTTATTATACCGTCAAGGACTGTGTGACTATTGAC
 413s read    0 36 +   36 GGTTATTATACCGTCAAGGACTGTGTGACTATTGAC
 414
 415a score=36
 416s phiX 378 36 + 5386 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCG
 417s read   0 36 +   36 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCG
 418
 419a score=36
 420s phiX 2159 36 + 5386 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTC
 421s read    0 36 +   36 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTC
 422
 423a score=36
 424s phiX 2872 36 + 5386 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
 425s read    0 36 -   36 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
 426
 427a score=35
 428s phiX 1507 35 + 5386 TGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC
 429s read    1 35 -   36 TGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC
 430
 431a score=36
 432s phiX 3862 36 + 5386 TTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTC
 433s read    0 36 -   36 TTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTC
 434
 435a score=36
 436s phiX 5186 36 + 5386 GAGTGCTTAATCCAACTTACCAAGCTGGGTTACGAC
 437s read    0 36 +   36 GAGTGCTTAATCCAACTTACCAAGCTGGGTTACGAC
 438
 439a score=36
 440s phiX 4195 36 + 5386 GTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCG
 441s read    0 36 +   36 GTATGTTGACGGCCATAAGGCTGCTTCTGACGTTCG
 442
 443a score=36
 444s phiX 634 36 + 5386 TGCTTATTATGTTCATCCCGTCAACATTCAAACGGC
 445s read   0 36 -   36 TGCTTATTATGTTCATCCCGTCAACATTCAAACGGC
 446
 447a score=35
 448s phiX 1293 35 + 5386 TAACACTACTGGTTATATTGACCATGCCGCTTTTC
 449s read    1 35 -   36 TAACACTACTGGTTATATTGACCATGCCGCTTTTC
 450
 451a score=36
 452s phiX 5156 36 + 5386 AAAATGCTCACAATGACAAATCTGTCCACGGAGTGC
 453s read    0 36 -   36 AAAATGCTCACAATGACAAATCTGTCCACGGAGTGC
 454
 455a score=36
 456s phiX 771 36 + 5386 GCGCAGGAAACACTGACGTTCTTACTGACGCAGAAG
 457s read   0 36 +   36 GCGCAGGAAACACTGACGTTCTTACTGACGCAGAAG
 458
 459a score=36
 460s phiX 1223 36 + 5386 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA
 461s read    0 36 +   36 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA
 462
 463a score=33
 464s phiX 1543 33 + 5386 CGCCAAATGACGACTTCTACCACATCTATTGAC
 465s read    3 33 -   36 CGCCAAATGACGACTTCTACCACATCTATTGAC
 466
 467a score=36
 468s phiX 4839 36 + 5386 GCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGT
 469s read    0 36 +   36 GCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGT
 470
 471a score=35
 472s phiX 203 35 + 5386 GATTCTGTCAAAAACTGACGCGTTGGATGAGGAGA
 473s read   0 35 +   36 GATTCTGTCAAAAACTGACGCGTTGGATGAGGAGA
 474
 475a score=29
 476s phiX 3262 29 + 5386 TGATAAAGGAAAGGATACTCGTGATTATC
 477s read    7 29 -   36 TGATAAAGGAAAGGATACTCGTGATTATC
 478
 479a score=28
 480s phiX 2480 36 + 5386 ACCTGTTTTACAGACACCTAAAGCTACATCGTCAAC
 481s read    0 36 -   36 ACCTGTTTTAAAGACACCTAAAGCTACATCGTCAAC
 482
 483a score=36
 484s phiX 331 36 + 5386 AAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTC
 485s read   0 36 -   36 AAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTC
 486
 487a score=36
 488s phiX 3977 36 + 5386 TTTATGGTTCGTTCTTATTACCCTTCTGAATGTCAC
 489s read    0 36 -   36 TTTATGGTTCGTTCTTATTACCCTTCTGAATGTCAC
 490
 491a score=36
 492s phiX 4864 36 + 5386 GCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
 493s read    0 36 +   36 GCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
 494
 495a score=36
 496s phiX 3270 36 + 5386 GAAAGGATACTCGTGATTATCTTGCTGCTGCATTTC
 497s read    0 36 -   36 GAAAGGATACTCGTGATTATCTTGCTGCTGCATTTC
 498
 499a score=36
 500s phiX 4173 36 + 5386 TTGAGTTCGATAATGGTGATATGTATGTTGACGGCC
 501s read    0 36 -   36 TTGAGTTCGATAATGGTGATATGTATGTTGACGGCC
 502
 503a score=30
 504s phiX 3809 30 + 5386 GTGGTTGATATTTTTCATGGTATTGATAAA
 505s read    0 30 +   36 GTGGTTGATATTTTTCATGGTATTGATAAA
 506
 507a score=28
 508s phiX 4634 28 + 5386 GCTTTGCGTGACTATTTTCGTGATATTG
 509s read    0 28 +   36 GCTTTGCGTGACTATTTTCGTGATATTG
 510
 511a score=36
 512s phiX 2737 36 + 5386 GCCATGATGGTGGTTATTATACCGTCAAGGACTGTG
 513s read    0 36 +   36 GCCATGATGGTGGTTATTATACCGTCAAGGACTGTG
 514
 515a score=14
 516s phiX 2191 14 + 5386 GTTCAGTTGTTGCA
 517s read    0 14 +   36 GTTCAGTTGTTGCA
 518
 519a score=35
 520s phiX 2702 35 + 5386 CCCGACTGCCTATGATGTTTATCCTTTGAATGGTC
 521s read    1 35 -   36 CCCGACTGCCTATGATGTTTATCCTTTGAATGGTC
 522
 523a score=36
 524s phiX 2942 36 + 5386 ATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGC
 525s read    0 36 -   36 ATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGC
 526
 527a score=36
 528s phiX 3860 36 + 5386 AATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGC
 529s read    0 36 -   36 AATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGC
 530
 531a score=36
 532s phiX 3092 36 + 5386 GCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG
 533s read    0 36 +   36 GCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG
 534
 535a score=36
 536s phiX 3150 36 + 5386 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAG
 537s read    0 36 +   36 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAG
 538
 539a score=36
 540s phiX 1192 36 + 5386 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
 541s read    0 36 +   36 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC
 542
 543a score=36
 544s phiX 156 36 + 5386 CGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGC
 545s read   0 36 -   36 CGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGC
 546
 547a score=36
 548s phiX 4791 36 + 5386 GGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG
 549s read    0 36 +   36 GGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG
 550
 551a score=36
 552s phiX 3848 36 + 5386 GATACTTGGAACAATTTCTGGAAAGACGGTAAAGCT
 553s read    0 36 +   36 GATACTTGGAACAATTTCTGGAAAGACGGTAAAGCT
 554
 555a score=35
 556s phiX 2742 35 + 5386 GATGGTGGTTATTATACCGTCAAGGACTGTGTGAC
 557s read    1 35 -   36 GATGGTGGTTATTATACCGTCAAGGACTGTGTGAC
 558
 559a score=36
 560s phiX 3014 36 + 5386 GCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACC
 561s read    0 36 +   36 GCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACC
 562
 563a score=36
 564s phiX 1090 36 + 5386 ATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTC
 565s read    0 36 -   36 ATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTC
 566
 567a score=35
 568s phiX 797 35 + 5386 GACGCAGAAGAAAACGTGCGTCAAAAATTACGTGC
 569s read   1 35 -   36 GACGCAGAAGAAAACGTGCGTCAAAAATTACGTGC
 570
 571a score=36
 572s phiX 4865 36 + 5386 CAAAATACGTGGCCTTATGGTTACAGTATGCCCATC
 573s read    0 36 -   36 CAAAATACGTGGCCTTATGGTTACAGTATGCCCATC
 574
 575a score=36
 576s phiX 4403 36 + 5386 GAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT
 577s read    0 36 +   36 GAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT
 578
 579a score=36
 580s phiX 1654 36 + 5386 GTTATTTCTTCATTTGGAGGTAAAACCTCTTATGAC
 581s read    0 36 -   36 GTTATTTCTTCATTTGGAGGTAAAACCTCTTATGAC
 582
 583a score=36
 584s phiX 5161 36 + 5386 GCTCACAATGACAAATCTGTCCACGGAGTGCTTAAT
 585s read    0 36 +   36 GCTCACAATGACAAATCTGTCCACGGAGTGCTTAAT
 586
 587a score=35
 588s phiX 1248 35 + 5386 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC
 589s read    1 35 -   36 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC
 590
 591a score=36
 592s phiX 3260 36 + 5386 GCTGATAAAGGAAAGGATACTCGTGATTATCTTGCT
 593s read    0 36 +   36 GCTGATAAAGGAAAGGATACTCGTGATTATCTTGCT
 594
 595a score=36
 596s phiX 3095 36 + 5386 ATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCC
 597s read    0 36 -   36 ATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCC
 598
 599a score=35
 600s phiX 2811 35 + 5386 GTTTATGTTGGTTTCATGGTTTGGTCTAACTTTAC
 601s read    1 35 -   36 GTTTATGTTGGTTTCATGGTTTGGTCTAACTTTAC
 602
 603a score=30
 604s phiX 80 30 + 5386 GAATTACTACTGCTTGTTTACGAATTAAAT
 605s read  0 30 +   36 GAATTACTACTGCTTGTTTACGAATTAAAT
 606
 607a score=36
 608s phiX 3458 36 + 5386 GCTGGCATTCAGTCGGCGACTTCACGCCAGAATACG
 609s read    0 36 +   36 GCTGGCATTCAGTCGGCGACTTCACGCCAGAATACG
 610
 611a score=35
 612s phiX 788 35 + 5386 GTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAA
 613s read   0 35 +   36 GTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAA
 614
 615a score=36
 616s phiX 3698 36 + 5386 GCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAAT
 617s read    0 36 +   36 GCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAAT
 618
 619a score=31
 620s phiX 2640 31 + 5386 GCCGACCCTAAATTTTTTGCCTGTTTGGTTC
 621s read    0 31 +   36 GCCGACCCTAAATTTTTTGCCTGTTTGGTTC
 622
 623a score=36
 624s phiX 304 36 + 5386 GTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTG
 625s read   0 36 +   36 GTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTG
 626
 627a score=35
 628s phiX 3065 35 + 5386 GGCATGGGTGATGCTGGTATTAAATCTGCCATTCA
 629s read    0 35 +   36 GGCATGGGTGATGCTGGTATTAAATCTGCCATTCA
 630
 631a score=36
 632s phiX 4427 36 + 5386 GATGAGTATAATTACCCCAAAAAGAAAGGTATTAAG
 633s read    0 36 +   36 GATGAGTATAATTACCCCAAAAAGAAAGGTATTAAG
 634
 635a score=36
 636s phiX 1460 36 + 5386 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATC
 637s read    0 36 -   36 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATC
 638
 639a score=36
 640s phiX 3999 36 + 5386 CTTCTGAATGTCACGCTGATTATTTTGACTTTGAGC
 641s read    0 36 -   36 CTTCTGAATGTCACGCTGATTATTTTGACTTTGAGC
 642
 643a score=36
 644s phiX 219 36 + 5386 GACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTT
 645s read   0 36 +   36 GACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTT
 646
 647a score=33
 648s phiX 3193 33 + 5386 GCAGGCTGGCACTTCTGCCGTTTCTGATAAGTT
 649s read    0 33 +   36 GCAGGCTGGCACTTCTGCCGTTTCTGATAAGTT
 650
 651a score=32
 652s phiX 1265 32 + 5386 GTGTTAATGCCACTCCTCTCCCGACTGTTAAC
 653s read    0 32 +   36 GTGTTAATGCCACTCCTCTCCCGACTGTTAAC
 654
 655a score=36
 656s phiX 4595 36 + 5386 GCTGACGACCGATTAGAGGCGTTTTATGATAATCCC
 657s read    0 36 -   36 GCTGACGACCGATTAGAGGCGTTTTATGATAATCCC
 658
 659a score=35
 660s phiX 1171 35 + 5386 GGCCTTGCTATTGACTCTACTGTAGACATTTTTAC
 661s read    1 35 -   36 GGCCTTGCTATTGACTCTACTGTAGACATTTTTAC
 662
 663a score=36
 664s phiX 635 36 + 5386 GCTTATTATGTTCATCCCGTCAACATTCAAACGGCC
 665s read   0 36 -   36 GCTTATTATGTTCATCCCGTCAACATTCAAACGGCC
 666
 667a score=36
 668s phiX 2872 36 + 5386 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
 669s read    0 36 -   36 CGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCC
 670
 671a score=36
 672s phiX 1013 36 + 5386 AAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCC
 673s read    0 36 -   36 AAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCC
 674
 675a score=36
 676s phiX 2688 36 + 5386 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
 677s read    0 36 +   36 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
 678
 679a score=28
 680s phiX 2147 36 + 5386 GCGTACTTATTCGCCACCATGATTATGACCAGTGTT
 681s read    0 36 +   36 GCGTACTTATTCGCCACCATGATTATTACCAGTGTT
 682
 683a score=35
 684s phiX 5190 35 + 5386 GCTTAATCCAACTTACCAAGCTGGGTTACGACGCG
 685s read    0 35 +   36 GCTTAATCCAACTTACCAAGCTGGGTTACGACGCG
 686
 687a score=36
 688s phiX 1589 36 + 5386 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
 689s read    0 36 -   36 AAGCTGCTTATGCTAATTTGCATACTGACCAAGAAC
 690
 691a score=27
 692s phiX 570 35 + 5386 GTACGCTGGACTTTGTGGGATACCCTCGCTTTCCT
 693s read   0 35 +   36 GTACGCTGTACTTTGTGGGATACCCTCGCTTTCCT
 694
 695a score=36
 696s phiX 241 36 + 5386 GGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGT
 697s read   0 36 +   36 GGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGT
 698
 699a score=36
 700s phiX 337 36 + 5386 GTGGATTACTATCTGAGTCCGATGCTGTTCAACCAC
 701s read   0 36 +   36 GTGGATTACTATCTGAGTCCGATGCTGTTCAACCAC
 702
 703a score=30
 704s phiX 1111 30 + 5386 GCTGGCGACTCCTTCGAGATGGACGCCGTT
 705s read    0 30 +   36 GCTGGCGACTCCTTCGAGATGGACGCCGTT
 706
 707a score=34
 708s phiX 1253 34 + 5386 TCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
 709s read    2 34 -   36 TCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
 710
 711a score=18
 712s phiX 3730 18 + 5386 GAATCAGCGGTATGGCTC
 713s read    0 18 +   36 GAATCAGCGGTATGGCTC
 714
 715a score=28
 716s phiX 2969 36 + 5386 GCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGT
 717s read    0 36 +   36 GCTGGTGGCGCCATGTCTAAATTTTTTGGAGGCGGT
 718
 719a score=36
 720s phiX 5150 36 + 5386 GGGATGAAAATGCTCACAATGACAAATCTGTCCACG
 721s read    0 36 +   36 GGGATGAAAATGCTCACAATGACAAATCTGTCCACG
 722
 723a score=36
 724s phiX 347 36 + 5386 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAA
 725s read   0 36 -   36 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAA
 726
 727a score=35
 728s phiX 4887 35 + 5386 ACAGTATGCCCATCGCAGTTCGCTACACGCAGGAC
 729s read    1 35 -   36 ACAGTATGCCCATCGCAGTTCGCTACACGCAGGAC
 730
 731a score=33
 732s phiX 3971 33 + 5386 GGCTTTTTTATGGTTCGTTCTTATTACCCTTCT
 733s read    0 33 +   36 GGCTTTTTTATGGTTCGTTCTTATTACCCTTCT
 734
 735a score=36
 736s phiX 5032 36 + 5386 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGC
 737s read    0 36 +   36 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGC
 738
 739a score=35
 740s phiX 1551 35 + 5386 GACGACTTCTACCACATCTATTGACATTATGGGTC
 741s read    1 35 -   36 GACGACTTCTACCACATCTATTGACATTATGGGTC
 742
 743a score=36
 744s phiX 1763 36 + 5386 AAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAAC
 745s read    0 36 -   36 AAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAAC
 746
 747a score=36
 748s phiX 1528 36 + 5386 GAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC
 749s read    0 36 +   36 GAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC
 750
 751a score=36
 752s phiX 4949 36 + 5386 CCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACC
 753s read    0 36 -   36 CCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACC
 754
 755a score=34
 756s phiX 4483 34 + 5386 GGAGGCCTCCACTATGAAATCGCGTAGAGGCTTT
 757s read    0 34 -   36 GGAGGCCTCCACTATGAAATCGCGTAGAGGCTTT
 758
 759a score=27
 760s phiX 4766 35 + 5386 CATTTCCATGCGGTGCACTTTATGCGGACACTTCC
 761s read    1 35 -   36 CATTTCCATGCGGTGCATTTTATGCGGACACTTCC
 762
 763a score=36
 764s phiX 176 36 + 5386 CTTTGCGACCTTTCGCCATCAACTAACGATTCTGTC
 765s read   0 36 -   36 CTTTGCGACCTTTCGCCATCAACTAACGATTCTGTC
 766
 767a score=36
 768s phiX 2576 36 + 5386 GATGGATACATCTGTCAACGCCGCTAATCAGGTTGT
 769s read    0 36 +   36 GATGGATACATCTGTCAACGCCGCTAATCAGGTTGT
 770
 771a score=36
 772s phiX 155 36 + 5386 GCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCG
 773s read   0 36 +   36 GCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCG
 774
 775a score=36
 776s phiX 226 36 + 5386 TGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGT
 777s read   0 36 +   36 TGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGT
 778
 779a score=36
 780s phiX 573 36 + 5386 CGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC
 781s read   0 36 -   36 CGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC
 782
 783a score=36
 784s phiX 3020 36 + 5386 GGTGGCATTCAAGGTGATGTGCTTGCTACCGATAAC
 785s read    0 36 +   36 GGTGGCATTCAAGGTGATGTGCTTGCTACCGATAAC
 786
 787a score=36
 788s phiX 3730 36 + 5386 GAATCAGCGGTATGGCTCTTCTCATATTGGCGCTAC
 789s read    0 36 -   36 GAATCAGCGGTATGGCTCTTCTCATATTGGCGCTAC
 790
 791a score=36
 792s phiX 2435 36 + 5386 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC
 793s read    0 36 +   36 TTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGC
 794
 795a score=36
 796s phiX 2709 36 + 5386 GCCTATGATGTTTATCCTTTGAATGGTCGCCATGAT
 797s read    0 36 +   36 GCCTATGATGTTTATCCTTTGAATGGTCGCCATGAT
 798
 799a score=28
 800s phiX 4227 28 + 5386 TTCGTGATGAGTTTGTATCTGTTACTGA
 801s read    0 28 +   36 TTCGTGATGAGTTTGTATCTGTTACTGA
 802
 803a score=34
 804s phiX 4605 34 + 5386 GATTAGAGGCGTTTTATGATAATCCCAATGCTTT
 805s read    0 34 +   36 GATTAGAGGCGTTTTATGATAATCCCAATGCTTT
 806
 807a score=36
 808s phiX 2765 36 + 5386 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
 809s read    0 36 -   36 GGACTGTGTGACTATTGACGTCCTTCCCCGTACGCC
 810
 811a score=34
 812s phiX 581 34 + 5386 TTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTG
 813s read   0 34 +   36 TTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTG
 814
 815a score=26
 816s phiX 663 26 + 5386 AAACGGCCTGTCTCATCATGGAAGGC
 817s read  10 26 -   36 AAACGGCCTGTCTCATCATGGAAGGC
 818
 819a score=36
 820s phiX 1143 36 + 5386 CGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGC
 821s read    0 36 -   36 CGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGC
 822
 823a score=36
 824s phiX 1513 36 + 5386 GCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAA
 825s read    0 36 +   36 GCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAA
 826
 827a score=26
 828s phiX 4035 26 + 5386 GTATCGAGGCTCTTAAACCTGCTATT
 829s read    0 26 +   36 GTATCGAGGCTCTTAAACCTGCTATT
 830
 831a score=36
 832s phiX 1656 36 + 5386 TATTTCTTCATTTGGAGGTAAAACCTCTTATGACGC
 833s read    0 36 -   36 TATTTCTTCATTTGGAGGTAAAACCTCTTATGACGC
 834
 835a score=36
 836s phiX 2070 36 + 5386 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
 837s read    0 36 +   36 GTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTT
 838
 839a score=28
 840s phiX 1625 36 + 5386 GTGATTACTTCATGCAGCGTTACCATGATGTTATTT
 841s read    0 36 +   36 GTGATTACTTCATGCAGCGTTACCGTGATGTTATTT
 842
 843a score=36
 844s phiX 3249 36 + 5386 GCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTG
 845s read    0 36 +   36 GCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTG
 846
 847a score=28
 848s phiX 1981 36 + 5386 GAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGAT
 849s read    0 36 +   36 GAAATTTCTATGAATGATGTTTTCCGTTCTGGTGAT
 850
 851a score=36
 852s phiX 2216 36 + 5386 AGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC
 853s read    0 36 -   36 AGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC
 854
 855a score=29
 856s phiX 3485 29 + 5386 CAGAATACGAAAGACCAGGTATATGCACA
 857s read    7 29 -   36 CAGAATACGAAAGACCAGGTATATGCACA
 858
 859a score=36
 860s phiX 1689 36 + 5386 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA
 861s read    0 36 -   36 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA
 862
 863a score=21
 864s phiX 3251 29 + 5386 AAGTCTGCCGCTGATAAAGGAAAGGATAC
 865s read    7 29 -   36 AAGTCTGCCGATGATAAAGGAAAGGATAC
 866
 867a score=36
 868s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
 869s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
 870
 871a score=36
 872s phiX 4281 36 + 5386 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
 873s read    0 36 -   36 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
 874
 875a score=34
 876s phiX 4135 34 + 5386 GCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAG
 877s read    0 34 +   36 GCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAG
 878
 879a score=36
 880s phiX 4413 36 + 5386 TTAAGGATATTCGCGATGAGTATAATTACCCCAAAA
 881s read    0 36 +   36 TTAAGGATATTCGCGATGAGTATAATTACCCCAAAA
 882
 883a score=36
 884s phiX 3987 36 + 5386 GTTCTTATTACCCTTCTGAATGTCACGCTGATTATT
 885s read    0 36 -   36 GTTCTTATTACCCTTCTGAATGTCACGCTGATTATT
 886
 887a score=36
 888s phiX 4202 36 + 5386 GACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAG
 889s read    0 36 +   36 GACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAG
 890
 891a score=28
 892s phiX 4097 36 + 5386 ATGCTTGGCTTCCATAAGCAGATGGATAACCGCATC
 893s read    0 36 -   36 ATGCTTGGCTTCAATAAGCAGATGGATAACCGCATC
 894
 895a score=35
 896s phiX 4306 35 + 5386 TATTAATAACACTATAGACCACCGCCCCGAAGGGG
 897s read    0 35 +   36 TATTAATAACACTATAGACCACCGCCCCGAAGGGG
 898
 899a score=35
 900s phiX 1520 35 + 5386 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACG
 901s read    0 35 +   36 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACG
 902
 903a score=36
 904s phiX 944 36 + 5386 TAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
 905s read   0 36 -   36 TAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
 906
 907a score=36
 908s phiX 1574 36 + 5386 ACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
 909s read    0 36 -   36 ACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
 910
 911a score=36
 912s phiX 2688 36 + 5386 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
 913s read    0 36 +   36 GTTCCGACTACCCTCCCGACTGCCTATGATGTTTAT
 914
 915a score=36
 916s phiX 2098 36 + 5386 GAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGT
 917s read    0 36 +   36 GAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGT
 918
 919a score=36
 920s phiX 523 36 + 5386 TACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC
 921s read   0 36 -   36 TACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC
 922
 923a score=36
 924s phiX 1251 36 + 5386 GTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
 925s read    0 36 +   36 GTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC
 926
 927a score=33
 928s phiX 4915 33 + 5386 GCAGGACGCTTTTTCACGTTCTGGTTGGTTGTG
 929s read    0 33 +   36 GCAGGACGCTTTTTCACGTTCTGGTTGGTTGTG
 930
 931a score=29
 932s phiX 3827 29 + 5386 GGTATTGATAAAGCTGTTGCCGATACTTG
 933s read    0 29 +   36 GGTATTGATAAAGCTGTTGCCGATACTTG
 934
 935a score=36
 936s phiX 3755 36 + 5386 ATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTC
 937s read    0 36 -   36 ATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTC
 938
 939a score=26
 940s phiX 663 26 + 5386 AAACGGCCTGTCTCATCATGGAAGGC
 941s read  10 26 -   36 AAACGGCCTGTCTCATCATGGAAGGC
 942
 943a score=36
 944s phiX 1115 36 + 5386 GCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCC
 945s read    0 36 -   36 GCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCC
 946
 947a score=28
 948s phiX 3098 28 + 5386 CAAGGCTCTAATGTTCCTAACCCTGATG
 949s read    0 28 -   36 CAAGGCTCTAATGTTCCTAACCCTGATG
 950
 951a score=36
 952s phiX 3081 36 + 5386 GTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTA
 953s read    0 36 -   36 GTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTA
 954
 955a score=27
 956s phiX 4220 27 + 5386 TCTGACGTTCGTGATGAGTTTGTATCT
 957s read    0 27 +   36 TCTGACGTTCGTGATGAGTTTGTATCT
 958
 959a score=36
 960s phiX 612 36 + 5386 TTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
 961s read   0 36 -   36 TTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
 962
 963a score=36
 964s phiX 4935 36 + 5386 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
 965s read    0 36 -   36 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
 966
 967a score=36
 968s phiX 288 36 + 5386 TCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC
 969s read   0 36 +   36 TCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC
 970
 971a score=36
 972s phiX 4689 36 + 5386 GCAAGGCTAATGATTCACACGCCGACTGCTATCAGT
 973s read    0 36 +   36 GCAAGGCTAATGATTCACACGCCGACTGCTATCAGT
 974
 975a score=23
 976s phiX 2546 23 + 5386 TGGTAATGGTGGTTTTCTTCATT
 977s read    0 23 +   36 TGGTAATGGTGGTTTTCTTCATT
 978
 979a score=36
 980s phiX 3519 36 + 5386 AGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTC
 981s read    0 36 -   36 AGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTC
 982
 983a score=36
 984s phiX 3857 36 + 5386 AACAATTTCTGGAAAGACGGTAAAGCTGATGGTATT
 985s read    0 36 -   36 AACAATTTCTGGAAAGACGGTAAAGCTGATGGTATT
 986
 987a score=36
 988s phiX 3343 36 + 5386 TTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAA
 989s read    0 36 -   36 TTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAA
 990
 991a score=27
 992s phiX 4671 27 + 5386 TTCTTGCTGCCGAGGGTCGCAAGGCTA
 993s read    0 27 +   36 TTCTTGCTGCCGAGGGTCGCAAGGCTA
 994
 995a score=31
 996s phiX 1345 31 + 5386 GATACCAATAAAATCCCTAAGCATTTGTTTC
 997s read    0 31 +   36 GATACCAATAAAATCCCTAAGCATTTGTTTC
 998
 999a score=36
1000s phiX 1799 36 + 5386 AGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC
1001s read    0 36 -   36 AGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC
1002
1003a score=36
1004s phiX 5076 36 + 5386 GGAACAACTCACTAAAAACCAAGCTGTCGCTACTTC
1005s read    0 36 +   36 GGAACAACTCACTAAAAACCAAGCTGTCGCTACTTC
1006
1007a score=35
1008s phiX 2762 35 + 5386 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA
1009s read    1 35 -   36 CAAGGACTGTGTGACTATTGACGTCCTTCCCCGTA
1010
1011a score=36
1012s phiX 4281 36 + 5386 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
1013s read    0 36 +   36 GCTACAATGTGCTCCCCCAACTTGATATTAATAACA
1014
1015a score=27
1016s phiX 4655 27 + 5386 GATATTGGTCGTATGGTTCTTGCTGCC
1017s read    0 27 +   36 GATATTGGTCGTATGGTTCTTGCTGCC
1018
1019a score=18
1020s phiX 4934 18 + 5386 TCTGGTTGGTTGTGGCCT
1021s read    0 18 +   36 TCTGGTTGGTTGTGGCCT
1022
1023a score=33
1024s phiX 1202 33 + 5386 TTACTTTTTATGTCCCTCATCGTCACGTTTATG
1025s read    0 33 +   36 TTACTTTTTATGTCCCTCATCGTCACGTTTATG
1026
1027a score=36
1028s phiX 5106 36 + 5386 TACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCC
1029s read    0 36 -   36 TACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCC
1030
1031a score=35
1032s phiX 5167 35 + 5386 AATGACAAATCTGTCCACGGAGTGCTTAATCCAAC
1033s read    1 35 -   36 AATGACAAATCTGTCCACGGAGTGCTTAATCCAAC
1034
1035a score=28
1036s phiX 2955 36 + 5386 TTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAAT
1037s read    0 36 +   36 TTGCTTCTGCTCTTGCTTGTGGCGCCATGTCTAAAT
1038
1039a score=30
1040s phiX 623 30 + 5386 GCTGCCGTCATTGCTTATTATGTTCATCCC
1041s read   0 30 +   36 GCTGCCGTCATTGCTTATTATGTTCATCCC
1042
1043a score=35
1044s phiX 1876 35 + 5386 CCGCCTACTGCGACTAAAGAGATTCAGTACCTTAA
1045s read    1 35 -   36 CCGCCTACTGCGACTAAAGAGATTCAGTACCTTAA
1046
1047a score=36
1048s phiX 1213 36 + 5386 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT
1049s read    0 36 +   36 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT
1050
1051a score=27
1052s phiX 557 27 + 5386 GCTTGCGTTTATGGTACGCTGGACTTT
1053s read   0 27 +   36 GCTTGCGTTTATGGTACGCTGGACTTT
1054
1055a score=36
1056s phiX 3628 36 + 5386 TACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAA
1057s read    0 36 -   36 TACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAA
1058
1059a score=35
1060s phiX 2253 35 + 5386 GACCACTCGCGATTCAATCATGACTTCGTGATAAA
1061s read    0 35 +   36 GACCACTCGCGATTCAATCATGACTTCGTGATAAA
1062
1063a score=36
1064s phiX 2478 36 + 5386 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
1065s read    0 36 +   36 GCACCTGTTTTACAGACACCTAAAGCTACATCGTCA
1066
1067a score=36
1068s phiX 3000 36 + 5386 GCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTG
1069s read    0 36 +   36 GCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTG
1070
1071a score=35
1072s phiX 4666 35 + 5386 TATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATG
1073s read    0 35 +   36 TATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATG
1074
1075a score=36
1076s phiX 3463 36 + 5386 CATTCAGTCGGCGACTTCACGCCAGAATACGAAAGA
1077s read    0 36 -   36 CATTCAGTCGGCGACTTCACGCCAGAATACGAAAGA
1078
1079a score=35
1080s phiX 4910 35 + 5386 TACACGCAGGACGCTTTTTCACGTTCTGGTTGGTT
1081s read    0 35 +   36 TACACGCAGGACGCTTTTTCACGTTCTGGTTGGTT
1082
1083a score=29
1084s phiX 4591 29 + 5386 GTTGGCTGACGACCGATTAGAGGCGTTTT
1085s read    0 29 +   36 GTTGGCTGACGACCGATTAGAGGCGTTTT
1086
1087a score=28
1088s phiX 2221 36 + 5386 AAATTTAATGTGACCGTTTATCGCAATCTGCCGACC
1089s read    0 36 -   36 AAATTTAATGTGAACGTTTATCGCAATCTGCCGACC
1090
1091a score=35
1092s phiX 645 35 + 5386 TTCATCCCGTCAACATTCAAACGGCCTGTCTCATC
1093s read   0 35 +   36 TTCATCCCGTCAACATTCAAACGGCCTGTCTCATC
1094
1095a score=36
1096s phiX 1363 36 + 5386 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAAC
1097s read    0 36 -   36 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAAC
1098
1099a score=35
1100s phiX 1612 35 + 5386 ACTGACCAAGAACGTGATTACTTCATGCAGCGTTA
1101s read    1 35 -   36 ACTGACCAAGAACGTGATTACTTCATGCAGCGTTA
1102
1103a score=35
1104s phiX 1044 35 + 5386 TTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC
1105s read    0 35 +   36 TTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC
1106
1107a score=25
1108s phiX 2884 33 + 5386 TTATTAAAGAGATTATTTGTCTCCAGCCACTTA
1109s read    0 33 +   36 TTATTAAAGAGATTATTTTTCTCCAGCCACTTA
1110
1111a score=36
1112s phiX 1587 36 + 5386 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
1113s read    0 36 +   36 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
1114
1115a score=36
1116s phiX 338 36 + 5386 TGGATTACTATCTGAGTCCGATGCTGTTCAACCACT
1117s read   0 36 +   36 TGGATTACTATCTGAGTCCGATGCTGTTCAACCACT
1118
1119a score=36
1120s phiX 4936 36 + 5386 TGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC
1121s read    0 36 +   36 TGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC
1122
1123a score=34
1124s phiX 4343 34 + 5386 GAAAAATGGTTTTTAGAGAACGAGAAGACGGTTA
1125s read    2 34 -   36 GAAAAATGGTTTTTAGAGAACGAGAAGACGGTTA
1126
1127a score=36
1128s phiX 3673 36 + 5386 CAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA
1129s read    0 36 -   36 CAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA
1130
1131a score=36
1132s phiX 4944 36 + 5386 TGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAG
1133s read    0 36 +   36 TGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAG
1134
1135a score=36
1136s phiX 1945 36 + 5386 GGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGT
1137s read    0 36 +   36 GGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGT
1138
1139a score=32
1140s phiX 2661 32 + 5386 TGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCC
1141s read    0 32 +   36 TGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCC
1142
1143a score=36
1144s phiX 3312 36 + 5386 TTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT
1145s read    0 36 +   36 TTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT
1146
1147a score=25
1148s phiX 2826 33 + 5386 ATGGTTTGGTCTAACTTTACCGCTACTAAATGC
1149s read    3 33 -   36 ATGGTTTGGTCAAACTTTACCGCTACTAAATGC
1150
1151a score=36
1152s phiX 726 36 + 5386 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT
1153s read   0 36 +   36 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT
1154
1155a score=36
1156s phiX 554 36 + 5386 GAGGCTTGCGTTTATGGTACGCTGGACTTTGTGGGA
1157s read   0 36 -   36 GAGGCTTGCGTTTATGGTACGCTGGACTTTGTGGGA
1158
1159a score=36
1160s phiX 484 36 + 5386 TGATTTCGATTTTCTGACGAGTAACAAAGTTTGGAT
1161s read   0 36 +   36 TGATTTCGATTTTCTGACGAGTAACAAAGTTTGGAT
1162
1163a score=36
1164s phiX 317 36 + 5386 TGTTGACATTTTAAAAGAGCGTGGATTACTATCTGA
1165s read   0 36 -   36 TGTTGACATTTTAAAAGAGCGTGGATTACTATCTGA
1166
1167a score=36
1168s phiX 909 36 + 5386 TAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGT
1169s read   0 36 +   36 TAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGT
1170
1171a score=36
1172s phiX 4935 36 + 5386 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
1173s read    0 36 -   36 CTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGC
1174
1175a score=36
1176s phiX 5004 36 + 5386 TCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
1177s read    0 36 -   36 TCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
1178
1179a score=33
1180s phiX 1378 33 + 5386 GGTTATTTGAATATCTATAACAACTATTTTAAA
1181s read    0 33 +   36 GGTTATTTGAATATCTATAACAACTATTTTAAA
1182
1183a score=30
1184s phiX 3167 30 + 5386 GGTAAAGGACTTCTTGAAGGTACGTTGCAG
1185s read    0 30 +   36 GGTAAAGGACTTCTTGAAGGTACGTTGCAG
1186
1187a score=33
1188s phiX 2737 33 + 5386 GCCATGATGGTGGTTATTATACCGTCAAGGACT
1189s read    0 33 +   36 GCCATGATGGTGGTTATTATACCGTCAAGGACT
1190
1191a score=36
1192s phiX 4098 36 + 5386 TGCTTGGCTTCCATAAGCAGATGGATAACCGCATCA
1193s read    0 36 +   36 TGCTTGGCTTCCATAAGCAGATGGATAACCGCATCA
1194
1195a score=36
1196s phiX 2573 36 + 5386 TCAGATGGATACATCTGTCAACGCCGCTAATCAGGT
1197s read    0 36 +   36 TCAGATGGATACATCTGTCAACGCCGCTAATCAGGT
1198
1199a score=36
1200s phiX 2452 36 + 5386 TCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTT
1201s read    0 36 +   36 TCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTT
1202
1203a score=36
1204s phiX 5178 36 + 5386 TGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG
1205s read    0 36 +   36 TGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG
1206
1207a score=30
1208s phiX 3777 30 + 5386 TTTCTAATGTCGTCACTGATGCTGCTTCTG
1209s read    0 30 +   36 TTTCTAATGTCGTCACTGATGCTGCTTCTG
1210
1211a score=36
1212s phiX 1842 36 + 5386 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC
1213s read    0 36 -   36 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC
1214
1215a score=36
1216s phiX 1081 36 + 5386 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
1217s read    0 36 -   36 CTTATTACCATTTCAACTACTCCGGTTATCGCTGGC
1218
1219a score=36
1220s phiX 1727 36 + 5386 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC
1221s read    0 36 -   36 TCTGGGCATCTGGCTATGATGTTGATGGAACTGACC
1222
1223a score=28
1224s phiX 4636 36 + 5386 TTTGCGTGACTATTTTCGTGATATTGGTCGTATGGT
1225s read    0 36 +   36 TTTGCGTGACTATTTTCGTGATATTGTTCGTATGGT
1226
1227a score=36
1228s phiX 2224 36 + 5386 TTTAATGTGACCGTTTATCGCAATCTGCCGACCACT
1229s read    0 36 +   36 TTTAATGTGACCGTTTATCGCAATCTGCCGACCACT
1230
1231a score=36
1232s phiX 3367 36 + 5386 CGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCA
1233s read    0 36 -   36 CGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCA
1234
1235a score=36
1236s phiX 3310 36 + 5386 GCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTC
1237s read    0 36 +   36 GCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTC
1238
1239a score=36
1240s phiX 5038 36 + 5386 TATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGA
1241s read    0 36 -   36 TATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGA
1242
1243a score=36
1244s phiX 2058 36 + 5386 TTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCT
1245s read    0 36 +   36 TTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCT
1246
1247a score=36
1248s phiX 387 36 + 5386 TCATGAGTCAAGTTACTGAACAATCCGTACGTTTCC
1249s read   0 36 +   36 TCATGAGTCAAGTTACTGAACAATCCGTACGTTTCC
1250
1251a score=36
1252s phiX 2753 36 + 5386 TTATACCGTCAAGGACTGTGTGACTATTGACGTCCT
1253s read    0 36 +   36 TTATACCGTCAAGGACTGTGTGACTATTGACGTCCT
1254
1255a score=36
1256s phiX 2127 36 + 5386 TTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCA
1257s read    0 36 -   36 TTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCA
1258
1259a score=36
1260s phiX 153 36 + 5386 TTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTT
1261s read   0 36 +   36 TTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTT
1262
1263a score=36
1264s phiX 3616 36 + 5386 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCA
1265s read    0 36 -   36 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCA
1266
1267a score=36
1268s phiX 2727 36 + 5386 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC
1269s read    0 36 -   36 TTGAATGGTCGCCATGATGGTGGTTATTATACCGTC
1270
1271a score=36
1272s phiX 2774 36 + 5386 GACTATTGACGTCCTTCCCCGTACGCCGGGCAATAA
1273s read    0 36 -   36 GACTATTGACGTCCTTCCCCGTACGCCGGGCAATAA
1274
1275a score=36
1276s phiX 4216 36 + 5386 TGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTAC
1277s read    0 36 +   36 TGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTAC
1278
1279a score=35
1280s phiX 4618 35 + 5386 TTATGATAATCCCAATGCTTTGCGTGACTATTTTC
1281s read    0 35 +   36 TTATGATAATCCCAATGCTTTGCGTGACTATTTTC
1282
1283a score=35
1284s phiX 410 35 + 5386 TCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAA
1285s read   0 35 +   36 TCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAA
1286
1287a score=35
1288s phiX 2729 35 + 5386 GAATGGTCGCCATGATGGTGGTTATTATACCGTCA
1289s read    0 35 +   36 GAATGGTCGCCATGATGGTGGTTATTATACCGTCA
1290
1291a score=35
1292s phiX 520 35 + 5386 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTG
1293s read   0 35 +   36 TGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTG
1294
1295a score=36
1296s phiX 4259 36 + 5386 TTAATGGATGAATTGGCACAATGCTACAATGTGCTC
1297s read    0 36 +   36 TTAATGGATGAATTGGCACAATGCTACAATGTGCTC
1298
1299a score=36
1300s phiX 1661 36 + 5386 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACA
1301s read    0 36 -   36 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACA
1302
1303a score=36
1304s phiX 532 36 + 5386 CTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTA
1305s read   0 36 -   36 CTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTA
1306
1307a score=35
1308s phiX 194 35 + 5386 TCAACTAACGATTCTGTCAAAAACTGACGCGTTGG
1309s read   0 35 +   36 TCAACTAACGATTCTGTCAAAAACTGACGCGTTGG
1310
1311a score=36
1312s phiX 2238 36 + 5386 TTATCGCAATCTGCCGACCACTCGCGATTCAATCAT
1313s read    0 36 +   36 TTATCGCAATCTGCCGACCACTCGCGATTCAATCAT
1314
1315a score=33
1316s phiX 1312 33 + 5386 GACCATGCCGCTTTTCTTGGCACGATTAACCCT
1317s read    0 33 +   36 GACCATGCCGCTTTTCTTGGCACGATTAACCCT
1318
1319a score=36
1320s phiX 1544 36 + 5386 GCCAAATGACGACTTCTACCACATCTATTGACATTA
1321s read    0 36 -   36 GCCAAATGACGACTTCTACCACATCTATTGACATTA
1322
1323a score=36
1324s phiX 556 36 + 5386 GGCTTGCGTTTATGGTACGCTGGACTTTGTGGGATA
1325s read   0 36 -   36 GGCTTGCGTTTATGGTACGCTGGACTTTGTGGGATA
1326
1327a score=36
1328s phiX 1248 36 + 5386 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCT
1329s read    0 36 +   36 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCT
1330
1331a score=33
1332s phiX 4173 33 + 5386 TTGAGTTCGATAATGGTGATATGTATGTTGACG
1333s read    0 33 +   36 TTGAGTTCGATAATGGTGATATGTATGTTGACG
1334
1335a score=35
1336s phiX 613 35 + 5386 TGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
1337s read   0 35 +   36 TGAGTTTATTGCTGCCGTCATTGCTTATTATGTTC
1338
1339a score=36
1340s phiX 205 36 + 5386 TTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGT
1341s read   0 36 +   36 TTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGT
1342
1343a score=36
1344s phiX 4980 36 + 5386 CTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTA
1345s read    0 36 -   36 CTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTA
1346
1347a score=30
1348s phiX 1701 30 + 5386 TCCTTTACTTGTCATGCGCTCTAATCTCTG
1349s read    0 30 +   36 TCCTTTACTTGTCATGCGCTCTAATCTCTG
1350
1351a score=35
1352s phiX 2320 35 + 5386 TAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACC
1353s read    0 35 +   36 TAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACC
1354
1355a score=19
1356s phiX 4183 19 + 5386 TAATGGTGATATGTATGTT
1357s read    0 19 +   36 TAATGGTGATATGTATGTT
1358
1359a score=35
1360s phiX 4087 35 + 5386 TCAATCCCCAATGCTTGGCTTCCATAAGCAGATGG
1361s read    0 35 +   36 TCAATCCCCAATGCTTGGCTTCCATAAGCAGATGG
1362
1363a score=36
1364s phiX 899 36 + 5386 TGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTC
1365s read   0 36 +   36 TGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTC
1366
1367a score=36
1368s phiX 1154 36 + 5386 TTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
1369s read    0 36 -   36 TTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
1370
1371a score=36
1372s phiX 3586 36 + 5386 TTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCA
1373s read    0 36 -   36 TTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCA
1374
1375a score=36
1376s phiX 3786 36 + 5386 TCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTT
1377s read    0 36 -   36 TCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTT
1378
1379a score=35
1380s phiX 3833 35 + 5386 GATAAAGCTGTTGCCGATACTTGGAACAATTTCTG
1381s read    0 35 +   36 GATAAAGCTGTTGCCGATACTTGGAACAATTTCTG
1382
1383a score=36
1384s phiX 988 36 + 5386 TGAGGATAAATTATGTCTAATATTCAAACTGGCGCC
1385s read   0 36 +   36 TGAGGATAAATTATGTCTAATATTCAAACTGGCGCC
1386
1387a score=29
1388s phiX 5357 29 + 5386 ATAAAAATGATTGGCGTATCCAACCTGCA
1389s read    0 29 +   36 ATAAAAATGATTGGCGTATCCAACCTGCA
1390
1391a score=36
1392s phiX 3711 36 + 5386 TAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCT
1393s read    0 36 +   36 TAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCT
1394
1395a score=36
1396s phiX 1206 36 + 5386 TTTTTATGTCCCTCATCGTCACGTTTATGGTGAACA
1397s read    0 36 +   36 TTTTTATGTCCCTCATCGTCACGTTTATGGTGAACA
1398
1399a score=21
1400s phiX 4299 21 + 5386 AACTTGATATTAATAACACTA
1401s read   15 21 -   36 AACTTGATATTAATAACACTA
1402
1403a score=36
1404s phiX 2115 36 + 5386 TCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGT
1405s read    0 36 +   36 TCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGT
1406
1407a score=36
1408s phiX 659 36 + 5386 ATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAA
1409s read   0 36 -   36 ATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAA
1410
1411a score=31
1412s phiX 1806 31 + 5386 TAAACATTCTGTGCCGCGTTTCTTTGTTCCT
1413s read    0 31 +   36 TAAACATTCTGTGCCGCGTTTCTTTGTTCCT
1414
1415a score=36
1416s phiX 1535 36 + 5386 AGCTTTCTCGCCAAATGACGACTTCTACCACATCTA
1417s read    0 36 -   36 AGCTTTCTCGCCAAATGACGACTTCTACCACATCTA
1418
1419a score=35
1420s phiX 2111 35 + 5386 TCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAA
1421s read    1 35 -   36 TCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAA
1422
1423a score=36
1424s phiX 2815 36 + 5386 ATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTA
1425s read    0 36 -   36 ATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTA
1426
1427a score=36
1428s phiX 5175 36 + 5386 ATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGC
1429s read    0 36 +   36 ATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGC
1430
1431a score=36
1432s phiX 3471 36 + 5386 CGGCGACTTCACGCCAGAATACGAAAGACCAGGTAT
1433s read    0 36 -   36 CGGCGACTTCACGCCAGAATACGAAAGACCAGGTAT
1434
1435a score=36
1436s phiX 1947 36 + 5386 CGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGA
1437s read    0 36 -   36 CGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGA
1438
1439a score=35
1440s phiX 2211 35 + 5386 TAGTCAGGTTAAATTTAATGTGACCGTTTATCGCA
1441s read    0 35 +   36 TAGTCAGGTTAAATTTAATGTGACCGTTTATCGCA
1442
1443a score=35
1444s phiX 3816 35 + 5386 ATATTTTTCATGGTATTGATAAAGCTGTTGCCGAT
1445s read    0 35 +   36 ATATTTTTCATGGTATTGATAAAGCTGTTGCCGAT
1446
1447a score=36
1448s phiX 3562 36 + 5386 GTCTATTATGGAAAACACCAATCTTTCCAAGCAACA
1449s read    0 36 -   36 GTCTATTATGGAAAACACCAATCTTTCCAAGCAACA
1450
1451a score=35
1452s phiX 4197 35 + 5386 ATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGT
1453s read    1 35 -   36 ATGTTGACGGCCATAAGGCTGCTTCTGACGTTCGT
1454
1455a score=35
1456s phiX 2906 35 + 5386 CCAGCCACTTAAGTGAGGTGATTTATGTTTGGTGC
1457s read    1 35 -   36 CCAGCCACTTAAGTGAGGTGATTTATGTTTGGTGC
1458
1459a score=35
1460s phiX 2842 35 + 5386 TTACCGCTACTAAATGCCGCGGATTGGTTTCGCTG
1461s read    0 35 +   36 TTACCGCTACTAAATGCCGCGGATTGGTTTCGCTG
1462
1463a score=31
1464s phiX 4373 31 + 5386 GTTACGCAGTTTTGCCGCAAGCTGGCTGCTG
1465s read    0 31 +   36 GTTACGCAGTTTTGCCGCAAGCTGGCTGCTG
1466
1467a score=16
1468s phiX 431 16 + 5386 TTGGCCTCTATTAAGC
1469s read  10 16 -   36 TTGGCCTCTATTAAGC
1470
1471a score=35
1472s phiX 1939 35 + 5386 ATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCC
1473s read    1 35 -   36 ATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCC
1474
1475a score=36
1476s phiX 5072 36 + 5386 GAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA
1477s read    0 36 -   36 GAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA
1478
1479a score=36
1480s phiX 4433 36 + 5386 TATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG
1481s read    0 36 +   36 TATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG
1482
1483a score=35
1484s phiX 1273 35 + 5386 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTA
1485s read    1 35 -   36 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTA
1486
1487a score=36
1488s phiX 4439 36 + 5386 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCA
1489s read    0 36 +   36 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCA
1490
1491a score=36
1492s phiX 3919 36 + 5386 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCAT
1493s read    0 36 +   36 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCAT
1494
1495a score=35
1496s phiX 4586 35 + 5386 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTA
1497s read    1 35 -   36 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTA
1498
1499a score=24
1500s phiX 3729 24 + 5386 AGAATCAGCGGTATGGCTCTTCTC
1501s read    0 24 +   36 AGAATCAGCGGTATGGCTCTTCTC
1502
1503a score=36
1504s phiX 1706 36 + 5386 TACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCT
1505s read    0 36 +   36 TACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCT
1506
1507a score=36
1508s phiX 1581 36 + 5386 GGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGA
1509s read    0 36 -   36 GGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGA
1510
1511a score=36
1512s phiX 1587 36 + 5386 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
1513s read    0 36 -   36 GCAAGCTGCTTATGCTAATTTGCATACTGACCAAGA
1514
1515a score=34
1516s phiX 1179 34 + 5386 TATTGACTCTACTGTAGACATTTTTACTTTTTAT
1517s read    0 34 +   36 TATTGACTCTACTGTAGACATTTTTACTTTTTAT
1518
1519a score=36
1520s phiX 2697 36 + 5386 ACCCTCCCGACTGCCTATGATGTTTATCCTTTGAAT
1521s read    0 36 -   36 ACCCTCCCGACTGCCTATGATGTTTATCCTTTGAAT
1522
1523a score=36
1524s phiX 3166 36 + 5386 TGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGG
1525s read    0 36 +   36 TGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGG
1526
1527a score=25
1528s phiX 2497 25 + 5386 CTAAAGCTACATCGTCAACGTTATA
1529s read   11 25 -   36 CTAAAGCTACATCGTCAACGTTATA
1530
1531a score=36
1532s phiX 2288 36 + 5386 AGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAA
1533s read    0 36 -   36 AGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAA
1534
1535a score=36
1536s phiX 440 36 + 5386 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA
1537s read   0 36 -   36 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTA
1538
1539a score=36
1540s phiX 1011 36 + 5386 TCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTC
1541s read    0 36 +   36 TCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTC
1542
1543a score=36
1544s phiX 160 36 + 5386 GCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATC
1545s read   0 36 +   36 GCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATC
1546
1547a score=35
1548s phiX 1164 35 + 5386 GCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA
1549s read    1 35 -   36 GCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA
1550
1551a score=31
1552s phiX 5014 31 + 5386 TAAATACGTTAACAAAAAGTCAGATATGGAC
1553s read    5 31 -   36 TAAATACGTTAACAAAAAGTCAGATATGGAC
1554
1555a score=36
1556s phiX 2285 36 + 5386 AAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGT
1557s read    0 36 -   36 AAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGT
1558
1559a score=32
1560s phiX 800 32 + 5386 GCAGAAGAAAACGTGCGTCAAAAATTACGTGC
1561s read   0 32 -   36 GCAGAAGAAAACGTGCGTCAAAAATTACGTGC
1562
1563a score=36
1564s phiX 1586 36 + 5386 TGCAAGCTGCTTATGCTAATTTGCATACTGACCAAG
1565s read    0 36 +   36 TGCAAGCTGCTTATGCTAATTTGCATACTGACCAAG
1566
1567a score=36
1568s phiX 4577 36 + 5386 TTTGACACTCTCACGTTGGCTGACGACCGATTAGAG
1569s read    0 36 +   36 TTTGACACTCTCACGTTGGCTGACGACCGATTAGAG
1570
1571a score=36
1572s phiX 3569 36 + 5386 ATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTT
1573s read    0 36 -   36 ATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTT
1574
1575a score=36
1576s phiX…

Large files files are truncated, but you can click here to view the full file