/test-data/1_2_intersect_priority_0.vcf

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 1381 lines · 1381 code · 0 blank · 0 comment · 0 complexity · e929681e12136298dcf9aefaf2b458ab MD5 · raw file

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  1. ##fileformat=VCFv4.0
    2. 

  2. ##vcfPytools=intersect /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_17.dat, /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_18.dat
    3. 

  3. #CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	chr10	chr11
    4. 

  4. chr10	131337	.	A	G	56.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48	PL:DP:SP:GT:GQ	89,12,0:4:0:1/1:72
    5. 

  5. chr10	255907	.	T	G	19.1	.	DP=45;AF1=0.5;CI95=0.5,0.5;DP4=18,6,0,9;MQ=49;PV4=0.00013,0.00033,0.033,0.2	PL:DP:SP:GT:GQ	49,0,255:33:39:0/1:52
    6. 

  6. chr10	282897	.	C	T	60	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=48	PL:DP:SP:GT:GQ	93,33,0:11:0:1/1:99
    7. 

  7. chr10	292927	.	C	A	10.2	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45	PL:DP:SP:GT:GQ	41,6,0:2:0:1/1:49
    8. 

  8. chr10	294953	.	A	G	17.1	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	49,9,0:3:0:1/1:63
    9. 

  9. chr10	329425	.	T	C	34	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=48;PV4=1,0.38,0.18,0.012	PL:DP:SP:GT:GQ	64,0,54:9:0:0/1:57
    10. 

  10. chr10	373048	.	T	C	68	.	DP=51;AF1=0.5;CI95=0.5,0.5;DP4=15,12,11,4;MQ=49;PV4=0.33,1.6e-13,0.054,1	PL:DP:SP:GT:GQ	98,0,255:42:5:0/1:99
    11. 

  11. chr10	395463	.	G	A	66	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,0,27;MQ=49	PL:DP:SP:GT:GQ	99,81,0:27:0:1/1:99
    12. 

  12. chr10	430502	.	C	G	22	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=3,12,7,0;MQ=48;PV4=0.0007,0.022,0.0017,1	PL:DP:SP:GT:GQ	52,0,234:22:32:0/1:55
    13. 

  13. chr10	445061	.	C	T	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=47	PL:DP:SP:GT:GQ	255,87,0:29:0:1/1:99
    14. 

  14. chr10	459940	.	G	A	36.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	69,12,0:4:0:1/1:72
    15. 

  15. chr10	518547	.	ACTCT	ACT	99	.	INDEL;DP=18;AF1=1;CI95=1,1;DP4=0,0,0,15;MQ=50	PL:DP:SP:GT:GQ	249,45,0:15:0:1/1:99
    16. 

  16. chr10	1052950	.	G	A	83	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,0,10,0;MQ=48;PV4=1,8.3e-05,7.4e-07,1	PL:DP:SP:GT:GQ	113,0,228:26:0:0/1:99
    17. 

  17. chr10	1061862	.	A	G	37	.	DP=60;AF1=0.5;CI95=0.5,0.5;DP4=2,21,5,3;MQ=49;PV4=0.0056,3.9e-07,3e-06,1	PL:DP:SP:GT:GQ	67,0,255:31:22:0/1:70
    18. 

  18. chr10	1142208	.	T	C	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,1,25;MQ=49	PL:DP:SP:GT:GQ	153,78,0:26:0:1/1:99
    19. 

  19. chr10	1230968	.	C	T	67.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=46	PL:DP:SP:GT:GQ	100,12,0:4:0:1/1:72
    20. 

  20. chr10	3054036	.	T	C	52.1	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	85,18,0:6:0:1/1:90
    21. 

  21. chr10	3143643	.	A	C	11.3	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	43,9,0:3:0:1/1:63
    22. 

  22. chr10	3145906	.	A	C	60	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=7,0,6,0;MQ=47;PV4=1,0.0016,0.0043,1	PL:DP:SP:GT:GQ	90,0,174:13:0:0/1:93
    23. 

  23. chr10	3155237	.	A	G	91	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=48	PL:DP:SP:GT:GQ	124,30,0:10:0:1/1:99
    24. 

  24. chr10	3155540	.	A	G	99	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=48	PL:DP:SP:GT:GQ	132,30,0:10:0:1/1:99
    25. 

  25. chr10	3155753	.	G	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=45	PL:DP:SP:GT:GQ	133,15,0:5:0:1/1:75
    26. 

  26. chr10	3161131	.	C	T	18	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	50,9,0:3:0:1/1:63
    27. 

  27. chr10	3171995	.	G	T	72	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=50	PL:DP:SP:GT:GQ	105,27,0:9:0:1/1:99
    28. 

  28. chr10	3715278	.	T	C	9.31	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=26	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    29. 

  29. chr10	5026052	.	A	G	26	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	58,9,0:3:0:1/1:63
    30. 

  30. chr10	5139685	.	G	A	50.1	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49	PL:DP:SP:GT:GQ	83,18,0:6:0:1/1:90
    31. 

  31. chr10	5435918	.	G	A	75	.	DP=47;AF1=0.9999;CI95=0.5,1;DP4=1,1,9,1;MQ=48;PV4=0.32,1,0.053,1	PL:DP:SP:GT:GQ	105,3,0:12:5:1/1:41
    32. 

  32. chr10	5437365	.	A	G	16.1	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=7,8,1,4;MQ=49;PV4=0.6,0.00011,0.047,1	PL:DP:SP:GT:GQ	46,0,255:20:2:0/1:49
    33. 

  33. chr10	5471122	.	T	C	9.69	.	DP=10;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	38,0,2:4:0:0/1:3
    34. 

  34. chr10	5471251	.	T	G	3.54	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.43,0.21,1	PL:DP:SP:GT:GQ	31,0,32:4:0:0/1:31
    35. 

  35. chr10	5667066	.	C	A	19.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	51,6,0:2:0:1/1:49
    36. 

  36. chr10	5693379	.	A	G	20.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46	PL:DP:SP:GT:GQ	52,6,0:2:0:1/1:49
    37. 

  37. chr10	5781969	.	A	T	99	.	DP=51;AF1=1;CI95=1,1;DP4=0,1,23,22;MQ=48;PV4=1,0.3,0.26,1	PL:DP:SP:GT:GQ	254,113,0:46:0:1/1:99
    38. 

  38. chr10	5790420	.	T	C	99	.	DP=51;AF1=1;CI95=1,1;DP4=1,0,17,25;MQ=49;PV4=0.42,0.046,0.29,1	PL:DP:SP:GT:GQ	237,97,0:43:0:1/1:99
    39. 

  39. chr10	5804633	.	TTC	TTCTC	99	.	INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=50;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	145,0,108:9:0:0/1:99
    40. 

  40. chr10	5978411	.	T	C	3.54	.	DP=34;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,3;MQ=50;PV4=0.4,0.05,0.25,1	PL:DP:SP:GT:GQ	31,0,37:5:0:0/1:33
    41. 

  41. chr10	6063674	.	T	C	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,0,29;MQ=46	PL:DP:SP:GT:GQ	183,87,0:29:0:1/1:99
    42. 

  42. chr10	6148059	.	A	G	19	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	51,9,0:3:0:1/1:63
    43. 

  43. chr10	6156118	.	T	C	92	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48	PL:DP:SP:GT:GQ	125,39,0:13:0:1/1:99
    44. 

  44. chr10	6258015	.	T	C	73	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=49	PL:DP:SP:GT:GQ	106,54,0:18:0:1/1:99
    45. 

  45. chr10	6258052	.	G	A	97	.	DP=36;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=48	PL:DP:SP:GT:GQ	130,54,0:18:0:1/1:99
    46. 

  46. chr10	6335597	.	C	T	23	.	DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0078,0.012,0.12	PL:DP:SP:GT:GQ	53,0,76:5:0:0/1:56
    47. 

  47. chr10	6335700	.	G	A	99	.	DP=14;AF1=1;CI95=0.5,1;DP4=1,0,7,6;MQ=46;PV4=1,0.27,0.15,1	PL:DP:SP:GT:GQ	204,10,0:14:0:1/1:60
    48. 

  48. chr10	7285632	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=43	PL:DP:SP:GT:GQ	255,33,0:11:0:1/1:99
    49. 

  49. chr10	7318803	.	T	C	99	.	DP=11;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=45;PV4=1,1,0.017,0.22	PL:DP:SP:GT:GQ	160,5,0:9:0:1/1:46
    50. 

  50. chr10	7605101	.	A	G	77.1	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=49	PL:DP:SP:GT:GQ	110,21,0:7:0:1/1:84
    51. 

  51. chr10	7618686	.	T	G	26.5	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=50	PL:DP:SP:GT:GQ	59,12,0:4:0:1/1:72
    52. 

  52. chr10	7763661	.	A	G	99	.	DP=47;AF1=1;CI95=1,1;DP4=0,0,8,8;MQ=49	PL:DP:SP:GT:GQ	161,48,0:16:0:1/1:99
    53. 

  53. chr10	7773976	.	A	G	99	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=44	PL:DP:SP:GT:GQ	255,66,0:22:0:1/1:99
    54. 

  54. chr10	7788495	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=44	PL:DP:SP:GT:GQ	181,24,0:8:0:1/1:96
    55. 

  55. chr10	7866268	.	C	G	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,23,2;MQ=45	PL:DP:SP:GT:GQ	252,75,0:25:0:1/1:99
    56. 

  56. chr10	8006644	.	A	G	36	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,0,0,9;MQ=48;PV4=2e-06,3.5e-17,6.7e-07,1	PL:DP:SP:GT:GQ	66,0,230:22:57:0/1:69
    57. 

  57. chr10	8093034	.	G	T	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,1,13,2;MQ=47;PV4=0.19,1,0.098,0.22	PL:DP:SP:GT:GQ	197,29,0:16:0:1/1:99
    58. 

  58. chr10	8093185	.	T	C	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46	PL:DP:SP:GT:GQ	146,24,0:8:0:1/1:96
    59. 

  59. chr10	8111621	.	C	T	19.1	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,4;MQ=49;PV4=0.43,0.12,0.13,1	PL:DP:SP:GT:GQ	49,0,84:7:0:0/1:52
    60. 

  60. chr10	9765758	.	A	G	15.9	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	47,6,0:2:0:1/1:49
    61. 

  61. chr10	11299735	.	A	T	42.3	.	DP=38;AF1=0.5336;CI95=0.5,1;DP4=0,1,3,2;MQ=49;PV4=1,0.16,0.29,1	PL:DP:SP:GT:GQ	72,0,9:6:0:0/1:12
    62. 

  62. chr10	11356093	.	TTTT	TTTTGTTT	99	.	INDEL;DP=42;AF1=0.95;CI95=0.5,1;DP4=1,2,11,15;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	255,15,15:29:0:1/1:10
    63. 

  63. chr10	11356094	.	TTT	TTTGTT	99	.	INDEL;DP=43;AF1=0.5;CI95=0.5,0.5;DP4=1,2,5,0;MQ=50;PV4=0.11,1,1,1	PL:DP:SP:GT:GQ	149,0,70:8:10:0/1:73
    64. 

  64. chr10	11356095	.	TT	TTGT	70.5	.	INDEL;DP=41;AF1=0.5;CI95=0.5,0.5;DP4=1,6,5,1;MQ=50;PV4=0.029,1,1,1	PL:DP:SP:GT:GQ	108,0,118:13:15:0/1:99
    65. 

  65. chr10	11789382	.	G	A	99	.	DP=57;AF1=1;CI95=1,1;DP4=0,1,30,20;MQ=49;PV4=0.41,0.21,0.29,1	PL:DP:SP:GT:GQ	251,127,0:51:0:1/1:99
    66. 

  66. chr10	11789511	.	C	G	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,4,31;MQ=49	PL:DP:SP:GT:GQ	205,105,0:35:0:1/1:99
    67. 

  67. chr10	11797467	.	G	A	99	.	DP=25;AF1=0.7303;CI95=0.5,1;DP4=0,2,2,15;MQ=47;PV4=1,0.16,0.1,1	PL:DP:SP:GT:GQ	153,0,2:19:0:0/1:3
    68. 

  68. chr10	11978499	.	T	G	49	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	82,24,0:8:0:1/1:96
    69. 

  69. chr10	12191620	.	C	A	32	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,0,7;MQ=48;PV4=0.00025,0.00053,0.0011,1	PL:DP:SP:GT:GQ	62,0,222:18:36:0/1:65
    70. 

  70. chr10	12198019	.	G	A	99	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,10;MQ=46;PV4=1,0.043,6.9e-16,1	PL:DP:SP:GT:GQ	179,0,186:18:0:0/1:99
    71. 

  71. chr10	12200125	.	C	T	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45	PL:DP:SP:GT:GQ	133,21,0:7:0:1/1:84
    72. 

  72. chr10	12202866	.	A	T	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,21,0;MQ=47	PL:DP:SP:GT:GQ	154,63,0:21:0:1/1:99
    73. 

  73. chr10	12209752	.	T	C	99	.	DP=47;AF1=0.5;CI95=0.5,0.5;DP4=10,12,9,14;MQ=49;PV4=0.77,7.1e-16,0.22,1	PL:DP:SP:GT:GQ	142,0,255:45:1:0/1:99
    74. 

  74. chr10	12292344	.	A	G	78	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,15;MQ=48;PV4=1,2.1e-13,6.2e-06,0.3	PL:DP:SP:GT:GQ	108,0,217:27:0:0/1:99
    75. 

  75. chr10	12858045	.	G	A	99	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=6,0,6,0;MQ=47;PV4=1,6e-05,0,1	PL:DP:SP:GT:GQ	132,0,169:12:0:0/1:99
    76. 

  76. chr10	12858409	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=44	PL:DP:SP:GT:GQ	213,39,0:13:0:1/1:99
    77. 

  77. chr10	12867598	.	C	G	81	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=12,6,8,4;MQ=50;PV4=1,2.5e-07,0.01,1	PL:DP:SP:GT:GQ	111,0,255:30:0:0/1:99
    78. 

  78. chr10	13100381	.	A	G	41	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,2,5,0;MQ=47;PV4=0.17,0.11,0.35,0.16	PL:DP:SP:GT:GQ	71,0,101:9:8:0/1:74
    79. 

  79. chr10	13214812	.	A	G	23	.	DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,0,6;MQ=47;PV4=1,0.0037,0.31,1	PL:DP:SP:GT:GQ	53,0,29:7:0:0/1:32
    80. 

  80. chr10	13237015	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	155,40,0:21:0:1/1:99
    81. 

  81. chr10	13275514	.	A	G	33.4	.	DP=17;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=50;PV4=1,1,0.37,1	PL:DP:SP:GT:GQ	66,13,0:9:0:1/1:65
    82. 

  82. chr10	13276179	.	A	G	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=46	PL:DP:SP:GT:GQ	154,24,0:8:0:1/1:96
    83. 

  83. chr10	13337588	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=46	PL:DP:SP:GT:GQ	164,57,0:19:0:1/1:99
    84. 

  84. chr10	13375906	.	T	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=43	PL:DP:SP:GT:GQ	141,15,0:5:0:1/1:75
    85. 

  85. chr10	13541724	.	TA	TAAAACA	99	.	INDEL;DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,1,7,1;MQ=50;PV4=1,0.14,0.074,0.0027	PL:DP:SP:GT:GQ	166,0,255:25:0:0/1:99
    86. 

  86. chr10	13653675	.	T	C	73	.	DP=53;AF1=0.5;CI95=0.5,0.5;DP4=13,2,0,16;MQ=48;PV4=5.1e-07,0.012,0.0041,1	PL:DP:SP:GT:GQ	103,0,214:31:63:0/1:99
    87. 

  87. chr10	13743391	.	C	A	33	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,6;MQ=48;PV4=1,0.44,0.041,1	PL:DP:SP:GT:GQ	63,0,87:12:0:0/1:66
    88. 

  88. chr10	13782605	.	G	A	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,1,32;MQ=48	PL:DP:SP:GT:GQ	181,99,0:33:0:1/1:99
    89. 

  89. chr10	15014418	.	C	G	44.1	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=47	PL:DP:SP:GT:GQ	77,21,0:7:0:1/1:84
    90. 

  90. chr10	15014440	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,16,0;MQ=47	PL:DP:SP:GT:GQ	155,48,0:16:0:1/1:99
    91. 

  91. chr10	15014698	.	C	T	12.3	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.13,0.008,1	PL:DP:SP:GT:GQ	42,0,96:5:0:0/1:45
    92. 

  92. chr10	15290696	.	C	T	99	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,12,0,10;MQ=46;PV4=1,0.17,0.0046,1	PL:DP:SP:GT:GQ	129,0,201:23:0:0/1:99
    93. 

  93. chr10	15713541	.	T	C	60.5	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45	PL:DP:SP:GT:GQ	93,12,0:4:0:1/1:72
    94. 

  94. chr10	15729923	.	C	T	99	.	DP=37;AF1=1;CI95=1,1;DP4=0,0,33,0;MQ=47	PL:DP:SP:GT:GQ	147,99,0:33:0:1/1:99
    95. 

  95. chr10	16797033	.	A	G	82	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,0,21;MQ=48;PV4=1,0.011,0.23,1	PL:DP:SP:GT:GQ	115,29,0:22:0:1/1:99
    96. 

  96. chr10	16967401	.	C	T	13	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    97. 

  97. chr10	16979751	.	T	A	23	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=9,5,0,7;MQ=49;PV4=0.0071,4.6e-05,0.014,1	PL:DP:SP:GT:GQ	53,0,255:21:21:0/1:56
    98. 

  98. chr10	17151714	.	CTCTTC	CTC	5.8	.	INDEL;DP=23;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,2;MQ=50;PV4=0.33,0.5,1,1	PL:DP:SP:GT:GQ	42,0,28:3:0:0/1:31
    99. 

  99. chr10	17156151	.	A	G	43.4	.	DP=18;AF1=0.5554;CI95=0.5,1;DP4=0,2,5,1;MQ=49;PV4=0.11,1,0.073,0.32	PL:DP:SP:GT:GQ	73,0,7:8:10:0/1:10
    100. 

  100. chr10	17157630	.	C	T	99	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=2,9,4,23;MQ=49;PV4=1,4.7e-10,0.012,0.018	PL:DP:SP:GT:GQ	180,0,213:38:0:0/1:99
    101. 

  101. chr10	17199419	.	C	G	63	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43	PL:DP:SP:GT:GQ	95,9,0:3:0:1/1:63
    102. 

  102. chr10	17216556	.	C	T	92	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=47	PL:DP:SP:GT:GQ	125,33,0:11:0:1/1:99
    103. 

  103. chr10	17645814	.	C	T	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=45	PL:DP:SP:GT:GQ	138,15,0:5:0:1/1:75
    104. 

  104. chr10	17646088	.	T	C,A	9.93	.	DP=13;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,1,0.12,0.073	PL:DP:SP:GT:GQ	66,28,37,29,0,46:6:0:1/1:5
    105. 

  105. chr10	18138639	.	A	G	98.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=44	PL:DP:SP:GT:GQ	131,15,0:5:0:1/1:75
    106. 

  106. chr10	18242304	.	T	C	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,8,15;MQ=46	PL:DP:SP:GT:GQ	255,69,0:23:0:1/1:99
    107. 

  107. chr10	18439747	.	C	T	51.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=46	PL:DP:SP:GT:GQ	84,12,0:4:0:1/1:72
    108. 

  108. chr10	18596796	.	A	T	11.1	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	42,6,0:2:0:1/1:49
    109. 

  109. chr10	18903605	.	A	C	29	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45	PL:DP:SP:GT:GQ	61,9,0:3:0:1/1:63
    110. 

  110. chr10	18931512	.	T	C	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,1,0,20;MQ=44;PV4=1,1,0.0023,1	PL:DP:SP:GT:GQ	222,47,0:21:0:1/1:99
    111. 

  111. chr10	18937579	.	AAAGAAG	AAAGAAGAAG	99	.	INDEL;DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	140,0,23:5:0:0/1:26
    112. 

  112. chr10	20462052	.	A	AGTCGTCT	12.7	.	INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    113. 

  113. chr10	20506418	.	G	A	99	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=18,11,11,12;MQ=48;PV4=0.4,5.8e-12,7.3e-17,1	PL:DP:SP:GT:GQ	207,0,255:52:4:0/1:99
    114. 

  114. chr10	20534333	.	A	G	99	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=22,11,9,4;MQ=48;PV4=1,5.1e-06,2.8e-15,0.003	PL:DP:SP:GT:GQ	200,0,255:46:0:0/1:99
    115. 

  115. chr10	20568524	.	T	C	58.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    116. 

  116. chr10	21120116	.	A	G	99	.	DP=24;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=46;PV4=1,0.24,0.15,1	PL:DP:SP:GT:GQ	138,31,0:21:0:1/1:99
    117. 

  117. chr10	21141469	.	T	C	45	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=50	PL:DP:SP:GT:GQ	78,24,0:8:0:1/1:96
    118. 

  118. chr10	21176945	.	G	A	9.53	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	39,3,0:1:0:1/1:41
    119. 

  119. chr10	21178780	.	A	G	43	.	DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,5,0;MQ=48;PV4=0.29,0.3,0.081,1	PL:DP:SP:GT:GQ	73,0,33:7:0:0/1:36
    120. 

  120. chr10	21414892	.	C	G	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,3,28;MQ=49	PL:DP:SP:GT:GQ	201,93,0:31:0:1/1:99
    121. 

  121. chr10	22171185	.	A	C	6.98	.	DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,3,0;MQ=48;PV4=1,0.35,1,0.33	PL:DP:SP:GT:GQ	36,0,62:7:0:0/1:39
    122. 

  122. chr10	22830719	.	G	C	99	.	DP=35;AF1=0.8277;CI95=0.5,1;DP4=2,1,21,7;MQ=48;PV4=1,0.046,0.098,1	PL:DP:SP:GT:GQ	201,0,1:31:0:1/1:5
    123. 

  123. chr10	22898553	.	T	G	12.3	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=8,0,4,0;MQ=48;PV4=1,0.039,0.047,1	PL:DP:SP:GT:GQ	42,0,146:12:0:0/1:45
    124. 

  124. chr10	24786291	.	A	G	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    125. 

  125. chr10	24889901	.	T	G	94	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,0,19;MQ=47;PV4=1,0.38,0.15,1	PL:DP:SP:GT:GQ	127,33,0:20:0:1/1:99
    126. 

  126. chr10	25888180	.	A	G	95.4	.	DP=43;AF1=1;CI95=0.5,1;DP4=0,1,9,2;MQ=48;PV4=0.25,0.45,0.19,1	PL:DP:SP:GT:GQ	128,13,0:12:0:1/1:65
    127. 

  127. chr10	25998967	.	T	G	12.3	.	DP=4;AF1=0.501;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,1,0.019,1	PL:DP:SP:GT:GQ	42,0,24:4:0:0/1:27
    128. 

  128. chr10	26357748	.	G	A	99	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,8,7;MQ=48;PV4=0.75,7.4e-08,7.6e-11,1	PL:DP:SP:GT:GQ	213,0,255:37:1:0/1:99
    129. 

  129. chr10	26463130	.	C	A	99	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,6,8,7;MQ=49;PV4=1,3.4e-16,0.024,1	PL:DP:SP:GT:GQ	161,0,255:28:0:0/1:99
    130. 

  130. chr10	26463507	.	A	G	9.31	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    131. 

  131. chr10	26781388	.	G	A	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,0,18;MQ=48	PL:DP:SP:GT:GQ	150,54,0:18:0:1/1:99
    132. 

  132. chr10	27009334	.	A	G	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,0,22;MQ=48	PL:DP:SP:GT:GQ	141,66,0:22:0:1/1:99
    133. 

  133. chr10	27405096	.	A	G	38	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=10,1,4,1;MQ=49;PV4=1,0.0018,0.0067,1	PL:DP:SP:GT:GQ	68,0,246:16:0:0/1:71
    134. 

  134. chr10	27409555	.	G	A	37.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49	PL:DP:SP:GT:GQ	70,12,0:4:0:1/1:72
    135. 

  135. chr10	27423744	.	T	C	42	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,2,5,3;MQ=49;PV4=0.61,4.2e-09,1,0.33	PL:DP:SP:GT:GQ	72,0,255:18:2:0/1:75
    136. 

  136. chr10	27456003	.	G	A	23	.	DP=27;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48	PL:DP:SP:GT:GQ	55,9,0:3:0:1/1:63
    137. 

  137. chr10	27506854	.	C	T	63.1	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	96,21,0:7:0:1/1:84
    138. 

  138. chr10	27536428	.	T	C	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,10,8;MQ=31	PL:DP:SP:GT:GQ	255,54,0:18:0:1/1:99
    139. 

  139. chr10	27577568	.	G	A	53.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47	PL:DP:SP:GT:GQ	86,15,0:5:0:1/1:75
    140. 

  140. chr10	27629880	.	T	C	29.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46	PL:DP:SP:GT:GQ	61,6,0:2:0:1/1:49
    141. 

  141. chr10	27687775	.	T	C	47.3	.	DP=21;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=50	PL:DP:SP:GT:GQ	80,15,0:5:0:1/1:75
    142. 

  142. chr10	27687965	.	A	G	99	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=11,4,5,6;MQ=47;PV4=0.23,1,1.1e-12,1	PL:DP:SP:GT:GQ	255,0,255:26:6:0/1:99
    143. 

  143. chr10	27692099	.	A	G	98.2	.	DP=17;AF1=0.5207;CI95=0.5,1;DP4=1,0,12,0;MQ=47;PV4=1,0.0035,0.12,1	PL:DP:SP:GT:GQ	128,0,11:13:0:0/1:14
    144. 

  144. chr10	27692371	.	T	G	91	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=48	PL:DP:SP:GT:GQ	124,42,0:14:0:1/1:99
    145. 

  145. chr10	28223886	.	A	C	40	.	DP=26;AF1=0.5006;CI95=0.5,0.5;DP4=3,0,7,0;MQ=48;PV4=1,1,0.0037,1	PL:DP:SP:GT:GQ	70,0,26:10:0:0/1:29
    146. 

  146. chr10	28228865	.	A	G	99	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=14,6,4,7;MQ=47;PV4=0.13,0.00015,1.7e-08,1	PL:DP:SP:GT:GQ	208,0,255:31:9:0/1:99
    147. 

  147. chr10	29760209	.	C	T	81	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=49	PL:DP:SP:GT:GQ	114,36,0:12:0:1/1:99
    148. 

  148. chr10	29822032	.	C	T	99	.	DP=22;AF1=1;CI95=0.5,1;DP4=1,0,11,6;MQ=49;PV4=1,6.3e-06,0.29,0.47	PL:DP:SP:GT:GQ	137,7,0:18:0:1/1:57
    149. 

  149. chr10	29839787	.	A	G	99	.	DP=44;AF1=1;CI95=1,1;DP4=0,1,19,17;MQ=48;PV4=0.49,1,0.28,1	PL:DP:SP:GT:GQ	255,91,0:37:0:1/1:99
    150. 

  150. chr10	29839864	.	A	C	99	.	DP=42;AF1=1;CI95=1,1;DP4=2,0,19,16;MQ=47;PV4=0.5,1,0.39,1	PL:DP:SP:GT:GQ	255,75,0:37:3:1/1:99
    151. 

  151. chr10	29921156	.	T	C	10.4	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	40,3,0:1:0:1/1:41
    152. 

  152. chr10	30611459	.	C	A	33	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=5,5,0,8;MQ=49;PV4=0.036,0.0066,0.015,1	PL:DP:SP:GT:GQ	63,0,233:18:14:0/1:66
    153. 

  153. chr10	30669878	.	G	C	38.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43	PL:DP:SP:GT:GQ	70,6,0:2:0:1/1:49
    154. 

  154. chr10	30749895	.	G	A	62.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46	PL:DP:SP:GT:GQ	95,12,0:4:0:1/1:72
    155. 

  155. chr10	30993448	.	G	A	58.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    156. 

  156. chr10	31005822	.	C	T	76.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43	PL:DP:SP:GT:GQ	109,12,0:4:0:1/1:72
    157. 

  157. chr10	31134557	.	T	C	43.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	76,12,0:4:0:1/1:72
    158. 

  158. chr10	31803516	.	G	A	17.7	.	DP=10;AF1=0.5939;CI95=0.5,1;DP4=1,0,2,1;MQ=47;PV4=1,1,0.4,1	PL:DP:SP:GT:GQ	47,0,5:4:0:0/1:7
    159. 

  159. chr10	32103171	.	G	A	8.64	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=47;PV4=1,0.013,0.31,0.065	PL:DP:SP:GT:GQ	38,0,65:7:0:0/1:41
    160. 

  160. chr10	33552696	.	A	G	99	.	DP=54;AF1=1;CI95=1,1;DP4=1,0,35,10;MQ=49;PV4=1,0.012,0.36,1	PL:DP:SP:GT:GQ	192,106,0:46:0:1/1:99
    161. 

  161. chr10	34620220	.	C	T	99	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,7;MQ=47;PV4=1,0.069,0.0033,0.44	PL:DP:SP:GT:GQ	166,0,149:13:0:0/1:99
    162. 

  162. chr10	34688287	.	G	A	99	.	DP=50;AF1=1;CI95=1,1;DP4=1,1,22,20;MQ=48;PV4=1,0.043,0.043,1	PL:DP:SP:GT:GQ	255,70,0:44:0:1/1:99
    163. 

  163. chr10	35805284	.	A	C	61.3	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47	PL:DP:SP:GT:GQ	94,15,0:5:0:1/1:75
    164. 

  164. chr10	38246545	.	A	G	52	.	DP=21;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,0,10;MQ=48;PV4=1,0.059,1,1	PL:DP:SP:GT:GQ	82,0,27:12:0:0/1:30
    165. 

  165. chr10	38344124	.	C	G	48	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=5,5,2,7;MQ=39;PV4=0.35,0.45,0.00022,1	PL:DP:SP:GT:GQ	78,0,202:19:5:0/1:81
    166. 

  166. chr10	38599101	.	CTT	CTTT	44.5	.	INDEL;DP=9;AF1=0.505;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,1,1,0.21	PL:DP:SP:GT:GQ	82,0,17:4:0:0/1:20
    167. 

  167. chr10	38934239	.	A	T	7.81	.	DP=5;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,0,3;MQ=48;PV4=0.25,0.031,1,0.18	PL:DP:SP:GT:GQ	37,0,20:4:0:0/1:23
    168. 

  168. chr10	42384737	.	C	T	53	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,8,10,10;MQ=16;PV4=1,0.25,1,1	PL:DP:SP:GT:GQ	83,0,51:36:0:0/1:54
    169. 

  169. chr10	42394484	.	T	C	44	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=8,7,7,7;MQ=17;PV4=1,4.2e-07,1,1	PL:DP:SP:GT:GQ	74,0,74:29:0:0/1:74
    170. 

  170. chr10	42396883	.	A	C	63.5	.	DP=79;AF1=1;CI95=0.5,1;DP4=0,1,6,4;MQ=33;PV4=0.45,0.073,0.095,1	PL:DP:SP:GT:GQ	95,7,0:11:0:1/1:57
    171. 

  171. chr10	43089965	.	G	A	40	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46	PL:DP:SP:GT:GQ	72,9,0:3:0:1/1:63
    172. 

  172. chr10	43209943	.	G	A	99	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,1,2,5;MQ=42;PV4=1,1,0.42,0.15	PL:DP:SP:GT:GQ	170,7,0:8:0:1/1:57
    173. 

  173. chr10	43606687	.	A	G	99	.	DP=56;AF1=0.5;CI95=0.5,0.5;DP4=1,7,16,10;MQ=46;PV4=0.039,0.45,0.0054,0.39	PL:DP:SP:GT:GQ	255,0,74:34:14:0/1:77
    174. 

  174. chr10	43617515	.	T	C	20	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,17,0,5;MQ=49;PV4=1,0.085,1.1e-05,0.25	PL:DP:SP:GT:GQ	50,0,234:23:0:0/1:53
    175. 

  175. chr10	43694394	.	A	C	24	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,2,5,0;MQ=49;PV4=0.51,0.42,0.032,0.44	PL:DP:SP:GT:GQ	54,0,128:14:3:0/1:57
    176. 

  176. chr10	43883342	.	T	A	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=48	PL:DP:SP:GT:GQ	137,39,0:13:0:1/1:99
    177. 

  177. chr10	44104137	.	G	T	20	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,5,5,0;MQ=49;PV4=0.086,0.098,0.029,0.37	PL:DP:SP:GT:GQ	50,0,182:14:11:0/1:53
    178. 

  178. chr10	45357413	.	A	T	32.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44	PL:DP:SP:GT:GQ	64,6,0:2:0:1/1:49
    179. 

  179. chr10	45423282	.	C	G	25	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.064,0.065,1	PL:DP:SP:GT:GQ	55,0,113:7:0:0/1:58
    180. 

  180. chr10	45622885	.	C	T	33.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45	PL:DP:SP:GT:GQ	65,6,0:2:0:1/1:49
    181. 

  181. chr10	45799379	.	TG	TGGG	12.7	.	INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    182. 

  182. chr10	45924023	.	G	A	92.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43	PL:DP:SP:GT:GQ	125,12,0:4:0:1/1:72
    183. 

  183. chr10	46998795	.	A	G	65	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,0.0058,0.26,0.15	PL:DP:SP:GT:GQ	95,0,134:12:0:0/1:98
    184. 

  184. chr10	46998894	.	G	A	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,17;MQ=48;PV4=1,3.8e-16,3.8e-06,0.3	PL:DP:SP:GT:GQ	132,0,221:30:0:0/1:99
    185. 

  185. chr10	46999465	.	A	G	34	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=49;PV4=1,0.0044,0.081,0.47	PL:DP:SP:GT:GQ	64,0,100:11:0:0/1:67
    186. 

  186. chr10	46999591	.	CATGAGGGAG	CATGAGGGAGATGAGGGAG	99	.	INDEL;DP=24;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=50;PV4=0.44,1,1,1	PL:DP:SP:GT:GQ	206,11,0:9:0:1/1:66
    187. 

  187. chr10	46999604	.	A	G	12.3	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,0.11,0.16,1	PL:DP:SP:GT:GQ	42,0,85:9:0:0/1:45
    188. 

  188. chr10	46999747	.	T	C	80	.	DP=66;AF1=0.5;CI95=0.5,0.5;DP4=10,11,3,13;MQ=49;PV4=0.091,1.1e-09,0.0043,1	PL:DP:SP:GT:GQ	110,0,255:37:10:0/1:99
    189. 

  189. chr10	47000004	.	T	C	99	.	DP=33;AF1=1;CI95=0.5,1;DP4=1,1,11,8;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	217,17,0:21:0:1/1:85
    190. 

  190. chr10	47087608	.	T	C	99	.	DP=44;AF1=0.7303;CI95=0.5,1;DP4=1,1,3,9;MQ=48;PV4=0.51,1,0.096,1	PL:DP:SP:GT:GQ	128,0,2:14:3:0/1:3
    191. 

  191. chr10	47087680	.	C	T	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,9,18;MQ=45	PL:DP:SP:GT:GQ	255,81,0:27:0:1/1:99
    192. 

  192. chr10	47087731	.	C	T	99	.	DP=62;AF1=1;CI95=1,1;DP4=0,0,34,21;MQ=48	PL:DP:SP:GT:GQ	255,166,0:55:0:1/1:99
    193. 

  193. chr10	47728608	.	T	C	47	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=7,4,3,2;MQ=32;PV4=1,1,1,1	PL:DP:SP:GT:GQ	77,0,78:16:0:0/1:77
    194. 

  194. chr10	48386110	.	T	C	99	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,6,1,13;MQ=48;PV4=1,4.7e-07,0.00011,1	PL:DP:SP:GT:GQ	144,0,145:20:0:0/1:99
    195. 

  195. chr10	48414570	.	A	G	81	.	DP=23;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,0,18;MQ=47;PV4=0.1,0.00023,0.0076,1	PL:DP:SP:GT:GQ	111,0,29:20:0:0/1:32
    196. 

  196. chr10	49661341	.	A	G	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=48	PL:DP:SP:GT:GQ	242,87,0:29:0:1/1:99
    197. 

  197. chr10	50227785	.	T	C	46.5	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48	PL:DP:SP:GT:GQ	79,12,0:4:0:1/1:72
    198. 

  198. chr10	50227927	.	C	A	33.1	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50	PL:DP:SP:GT:GQ	66,21,0:7:0:1/1:84
    199. 

  199. chr10	50691360	.	T	C	65	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=48	PL:DP:SP:GT:GQ	98,24,0:8:0:1/1:96
    200. 

  200. chr10	50724016	.	C	T	7.59	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49	PL:DP:SP:GT:GQ	38,6,0:2:0:1/1:49
    201. 

  201. chr10	50820345	.	C	A	99	.	DP=16;AF1=1;CI95=0.5,1;DP4=0,1,9,4;MQ=48;PV4=0.36,0.15,0.22,1	PL:DP:SP:GT:GQ	152,14,0:14:0:1/1:70
    202. 

  202. chr10	50856652	.	G	A	54.5	.	DP=10;AF1=0.9998;CI95=0.5,1;DP4=0,1,0,5;MQ=47;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	84,2,0:6:0:1/1:37
    203. 

  203. chr10	50902684	.	C	T	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,1,0,30;MQ=46;PV4=1,1,0.088,1	PL:DP:SP:GT:GQ	187,77,0:31:0:1/1:99
    204. 

  204. chr10	50944009	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=42	PL:DP:SP:GT:GQ	182,24,0:8:0:1/1:96
    205. 

  205. chr10	51532367	.	A	G	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,4,10;MQ=29	PL:DP:SP:GT:GQ	164,42,0:14:0:1/1:99
    206. 

  206. chr10	51549496	.	T	C	94	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,11,1;MQ=48;PV4=1,8.6e-08,8.3e-08,1	PL:DP:SP:GT:GQ	124,0,180:20:0:0/1:99
    207. 

  207. chr10	51549545	.	G	T	97	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,12,1;MQ=49	PL:DP:SP:GT:GQ	130,39,0:13:0:1/1:99
    208. 

  208. chr10	52390836	.	A	G	99	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46	PL:DP:SP:GT:GQ	150,24,0:8:0:1/1:96
    209. 

  209. chr10	52419433	.	G	A	7.8	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37	PL:DP:SP:GT:GQ	37,3,0:1:0:1/1:41
    210. 

  210. chr10	52576068	.	G	A	97	.	DP=39;AF1=1;CI95=1,1;DP4=0,1,0,31;MQ=48;PV4=1,1,0.19,1	PL:DP:SP:GT:GQ	130,79,0:32:0:1/1:99
    211. 

  211. chr10	53457421	.	A	G	3.54	.	DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,3,0;MQ=50;PV4=1,0.059,0.11,0.15	PL:DP:SP:GT:GQ	31,0,80:8:0:0/1:34
    212. 

  212. chr10	54148888	.	C	A	47	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=38	PL:DP:SP:GT:GQ	80,33,0:11:0:1/1:99
    213. 

  213. chr10	54528266	.	G	C	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,6,2;MQ=45	PL:DP:SP:GT:GQ	190,24,0:8:0:1/1:96
    214. 

  214. chr10	54528298	.	G	C	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=45	PL:DP:SP:GT:GQ	159,48,0:16:0:1/1:99
    215. 

  215. chr10	54528353	.	C	G	69.1	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48	PL:DP:SP:GT:GQ	102,21,0:7:0:1/1:84
    216. 

  216. chr10	55719652	.	C	T	56	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50	PL:DP:SP:GT:GQ	89,27,0:9:0:1/1:99
    217. 

  217. chr10	55779909	.	G	C	52	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,11,0;MQ=49;PV4=1,0.023,0.19,1	PL:DP:SP:GT:GQ	82,0,73:16:0:0/1:75
    218. 

  218. chr10	58118630	.	T	C	29.5	.	DP=49;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,1,0.25,1	PL:DP:SP:GT:GQ	58,0,1:5:0:1/1:5
    219. 

  219. chr10	58119976	.	G	A	51.3	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=48	PL:DP:SP:GT:GQ	84,15,0:5:0:1/1:75
    220. 

  220. chr10	59958956	.	C	A	14.2	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.021,0.092,1	PL:DP:SP:GT:GQ	44,0,99:6:0:0/1:47
    221. 

  221. chr10	60996453	.	G	A	69	.	DP=24;AF1=1;CI95=1,1;DP4=0,1,0,13;MQ=49;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	102,25,0:14:0:1/1:99
    222. 

  222. chr10	61005244	.	G	C	99	.	DP=40;AF1=1;CI95=1,1;DP4=0,0,5,22;MQ=48	PL:DP:SP:GT:GQ	230,81,0:27:0:1/1:99
    223. 

  223. chr10	61083689	.	CAG	CAGTTAG	38.7	.	INDEL;DP=28;AF1=0.5263;CI95=0.5,1;DP4=3,0,17,0;MQ=50;PV4=1,0.0041,1,1	PL:DP:SP:GT:GQ	76,0,10:20:0:0/1:13
    224. 

  224. chr10	61083690	.	AG	AGTTGG	99	.	INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,0,19,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	235,0,37:23:0:0/1:40
    225. 

  225. chr10	61122268	.	TG	TTAG,TGTTAG	99	.	INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50	PL:DP:SP:GT:GQ	242,47,204,23,0,201:9:0:1/1:96
    226. 

  226. chr10	61311416	.	TAAA	TAA	93.6	.	INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50	PL:DP:SP:GT:GQ	134,18,0:6:0:1/1:90
    227. 

  227. chr10	61552878	.	G	A	4.77	.	DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,3;MQ=50;PV4=1,0.0038,0.34,0.25	PL:DP:SP:GT:GQ	33,0,31:5:0:0/1:32
    228. 

  228. chr10	61802577	.	TCC	TCCC	99	.	INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50	PL:DP:SP:GT:GQ	187,39,0:13:0:1/1:99
    229. 

  229. chr10	61815335	.	C	A,G	58.1	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	91,21,83,0,4,83:8:0:1/1:84
    230. 

  230. chr10	61819049	.	T	G	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=47	PL:DP:SP:GT:GQ	149,51,0:17:0:1/1:99
    231. 

  231. chr10	62553763	.	A	G	86	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=48	PL:DP:SP:GT:GQ	119,30,0:10:0:1/1:99
    232. 

  232. chr10	63995983	.	C	T	94.8	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,1,2,9;MQ=48;PV4=1,0.27,0.22,1	PL:DP:SP:GT:GQ	127,10,0:12:0:1/1:60
    233. 

  233. chr10	64005711	.	C	T	81.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=46	PL:DP:SP:GT:GQ	114,18,0:6:0:1/1:90
    234. 

  234. chr10	64415184	.	A	G	99	.	DP=46;AF1=1;CI95=1,1;DP4=0,0,32,11;MQ=48	PL:DP:SP:GT:GQ	248,129,0:43:0:1/1:99
    235. 

  235. chr10	64573771	.	C	T	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=43	PL:DP:SP:GT:GQ	233,69,0:23:0:1/1:99
    236. 

  236. chr10	64967445	.	A	T	99	.	DP=49;AF1=1;CI95=1,1;DP4=0,0,23,17;MQ=49	PL:DP:SP:GT:GQ	246,120,0:40:0:1/1:99
    237. 

  237. chr10	69583206	.	G	A	6.23	.	DP=5;AF1=0.505;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.029,0.33,1	PL:DP:SP:GT:GQ	35,0,17:4:0:0/1:20
    238. 

  238. chr10	69934467	.	A	G	40	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=50	PL:DP:SP:GT:GQ	73,24,0:8:0:1/1:96
    239. 

  239. chr10	70051928	.	A	G	99	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,5,8;MQ=48;PV4=0.31,0.013,5.8e-34,1	PL:DP:SP:GT:GQ	251,0,255:35:5:0/1:99
    240. 

  240. chr10	70143774	.	C	T	46	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,3;MQ=47;PV4=1,0.002,0.064,1	PL:DP:SP:GT:GQ	76,0,82:6:0:0/1:78
    241. 

  241. chr10	70405855	.	A	G	99	.	DP=13;AF1=1;CI95=0.5,1;DP4=0,1,7,4;MQ=48;PV4=0.42,0.25,0.19,1	PL:DP:SP:GT:GQ	160,7,0:12:0:1/1:57
    242. 

  242. chr10	70502288	.	G	A	99	.	DP=76;AF1=0.5;CI95=0.5,0.5;DP4=15,24,17,15;MQ=48;PV4=0.24,4.1e-24,1.9e-13,0.2	PL:DP:SP:GT:GQ	235,0,255:71:6:0/1:99
    243. 

  243. chr10	70525591	.	G	A	12.3	.	DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.23,0.0022,1	PL:DP:SP:GT:GQ	42,0,62:4:0:0/1:45
    244. 

  244. chr10	70641860	.	T	C	99	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,1,10;MQ=48	PL:DP:SP:GT:GQ	133,33,0:11:0:1/1:99
    245. 

  245. chr10	70646193	.	C	T	16.1	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,13,5,0;MQ=49;PV4=0.00012,0.0016,1.1e-05,1	PL:DP:SP:GT:GQ	46,0,217:18:39:0/1:49
    246. 

  246. chr10	70694171	.	T	A	14.2	.	DP=8;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=44;PV4=1,0.42,0.096,1	PL:DP:SP:GT:GQ	44,0,29:5:0:0/1:32
    247. 

  247. chr10	70725128	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,1,9,3;MQ=45;PV4=0.31,1,0.039,1	PL:DP:SP:GT:GQ	236,22,0:13:0:1/1:88
    248. 

  248. chr10	70748716	.	TG	TGACAG	12.7	.	INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    249. 

  249. chr10	70928380	.	A	C	19.1	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=8,2,0,6;MQ=49;PV4=0.007,0.0015,0.00032,1	PL:DP:SP:GT:GQ	49,0,226:16:22:0/1:52
    250. 

  250. chr10	70992664	.	C	T	78	.	DP=28;AF1=1;CI95=1,1;DP4=1,0,0,23;MQ=49;PV4=0.042,1,0.31,1	PL:DP:SP:GT:GQ	111,56,0:24:0:1/1:99
    251. 

  251. chr10	70992912	.	A	T	99	.	DP=55;AF1=1;CI95=1,1;DP4=3,0,13,30;MQ=48;PV4=0.037,1,0.037,1	PL:DP:SP:GT:GQ	239,70,0:46:14:1/1:99
    252. 

  252. chr10	70992949	.	T	A	93	.	DP=35;AF1=1;CI95=1,1;DP4=0,1,0,29;MQ=48;PV4=1,0.13,0.2,1	PL:DP:SP:GT:GQ	126,61,0:30:0:1/1:99
    253. 

  253. chr10	71016947	.	C	G	20.6	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50	PL:DP:SP:GT:GQ	53,12,0:4:0:1/1:72
    254. 

  254. chr10	71018660	.	T	C	53	.	DP=21;AF1=0.502;CI95=0.5,0.5;DP4=1,1,0,6;MQ=47;PV4=0.25,1,0.35,1	PL:DP:SP:GT:GQ	83,0,21:8:0:0/1:24
    255. 

  255. chr10	71144702	.	G	A	99	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=48	PL:DP:SP:GT:GQ	140,33,0:11:0:1/1:99
    256. 

  256. chr10	71392557	.	C	T	55.1	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49	PL:DP:SP:GT:GQ	88,21,0:7:0:1/1:84
    257. 

  257. chr10	71969062	.	G	A	24	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	56,9,0:3:0:1/1:63
    258. 

  258. chr10	72195439	.	T	C	69.1	.	DP=11;AF1=1;CI95=0.5,1;DP4=1,0,9,1;MQ=49;PV4=1,0.18,0.34,1	PL:DP:SP:GT:GQ	100,5,0:11:0:1/1:46
    259. 

  259. chr10	72297567	.	G	A	45	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,2,5,0;MQ=48;PV4=0.048,0.17,0.031,1	PL:DP:SP:GT:GQ	75,0,40:7:13:0/1:43
    260. 

  260. chr10	72357713	.	C	T	63	.	DP=5;AF1=0.501;CI95=0.5,0.5;DP4=1,0,4,0;MQ=43;PV4=1,0.34,0.2,0.41	PL:DP:SP:GT:GQ	93,0,24:5:0:0/1:27
    261. 

  261. chr10	72496375	.	A	G	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43	PL:DP:SP:GT:GQ	167,18,0:6:0:1/1:90
    262. 

  262. chr10	72500863	.	C	G	29.6	.	DP=33;AF1=0.5939;CI95=0.5,1;DP4=0,1,5,0;MQ=49;PV4=0.17,0.34,0.35,1	PL:DP:SP:GT:GQ	59,0,5:6:0:0/1:7
    263. 

  263. chr10	72619205	.	C	T	99	.	DP=45;AF1=1;CI95=0.5,1;DP4=1,1,6,9;MQ=49;PV4=1,0.37,0.14,1	PL:DP:SP:GT:GQ	147,7,0:17:0:1/1:57
    264. 

  264. chr10	72633458	.	C	T	59	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,12;MQ=49;PV4=1,1.4e-09,0.053,1	PL:DP:SP:GT:GQ	89,0,184:20:0:0/1:92
    265. 

  265. chr10	73104056	.	A	G	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=47	PL:DP:SP:GT:GQ	166,66,0:22:0:1/1:99
    266. 

  266. chr10	73121913	.	A	G	99	.	DP=37;AF1=1;CI95=1,1;DP4=1,0,16,16;MQ=42;PV4=1,1,0.055,1	PL:DP:SP:GT:GQ	255,79,0:33:0:1/1:99
    267. 

  267. chr10	73520632	.	A	C	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=48	PL:DP:SP:GT:GQ	132,27,0:9:0:1/1:99
    268. 

  268. chr10	73578882	.	T	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,1,34;MQ=48	PL:DP:SP:GT:GQ	175,105,0:35:0:1/1:99
    269. 

  269. chr10	73579501	.	AGAGG	AG	10.8	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	48,3,0:1:0:1/1:41
    270. 

  270. chr10	73579979	.	G	A	99	.	DP=35;AF1=0.5;CI95=0.5,0.5;DP4=16,0,16,0;MQ=47;PV4=1,1.3e-05,1.4e-12,0.049	PL:DP:SP:GT:GQ	190,0,233:32:0:0/1:99
    271. 

  271. chr10	74813116	.	A	G	29	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,7,5,1;MQ=47;PV4=0.041,0.19,0.044,1	PL:DP:SP:GT:GQ	59,0,157:15:14:0/1:62
    272. 

  272. chr10	75186107	.	C	T	18.1	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,2,0,4;MQ=48;PV4=0.076,0.3,0.12,1	PL:DP:SP:GT:GQ	48,0,99:10:11:0/1:51
    273. 

  273. chr10	75187502	.	G	A	44	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,7,4,2;MQ=48;PV4=0.091,0.089,0.0045,1	PL:DP:SP:GT:GQ	74,0,144:14:10:0/1:77
    274. 

  274. chr10	75476882	.	A	G	3.55	.	DP=11;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	31,0,25:4:0:0/1:27
    275. 

  275. chr10	75526651	.	T	C	37	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,6;MQ=48;PV4=0.4,0.17,0.46,0.43	PL:DP:SP:GT:GQ	67,0,76:10:0:0/1:69
    276. 

  276. chr10	75574848	.	G	C	15.1	.	DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.16,0.065,1	PL:DP:SP:GT:GQ	45,0,68:4:5:0/1:48
    277. 

  277. chr10	75607168	.	T	C	11.4	.	DP=25;AF1=0.508;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.2,0.21,1	PL:DP:SP:GT:GQ	41,0,15:4:0:0/1:18
    278. 

  278. chr10	75607643	.	C	CT	59.4	.	INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	99,9,0:3:0:1/1:63
    279. 

  279. chr10	75607696	.	CAA	CA	99	.	INDEL;DP=15;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=50	PL:DP:SP:GT:GQ	154,42,0:14:0:1/1:99
    280. 

  280. chr10	75673101	.	T	C	72.1	.	DP=39;AF1=0.9966;CI95=0.5,1;DP4=0,1,6,2;MQ=49;PV4=0.33,0.23,0.26,1	PL:DP:SP:GT:GQ	101,1,0:9:0:1/1:23
    281. 

  281. chr10	75842152	.	G	A	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=47	PL:DP:SP:GT:GQ	132,30,0:10:0:1/1:99
    282. 

  282. chr10	75843100	.	T	A	67.1	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	100,21,0:7:0:1/1:84
    283. 

  283. chr10	75863750	.	C	T	61	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=48;PV4=1,0.00017,0.015,0.46	PL:DP:SP:GT:GQ	91,0,143:12:0:0/1:94
    284. 

  284. chr10	76729901	.	T	A	7	.	DP=7;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.077,0.11,0.27	PL:DP:SP:GT:GQ	36,0,19:3:0:0/1:22
    285. 

  285. chr10	76854564	.	C	T	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,1,13,6;MQ=48;PV4=0.35,0.19,0.27,1	PL:DP:SP:GT:GQ	205,29,0:20:0:1/1:99
    286. 

  286. chr10	76855326	.	A	G	9.31	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    287. 

  287. chr10	76855412	.	G	A	99	.	DP=49;AF1=1;CI95=1,1;DP4=1,0,9,29;MQ=44;PV4=0.26,1,9.9e-05,1	PL:DP:SP:GT:GQ	255,91,0:39:0:1/1:99
    288. 

  288. chr10	76857716	.	A	G	96	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=47	PL:DP:SP:GT:GQ	129,27,0:9:0:1/1:99
    289. 

  289. chr10	77454739	.	A	G	51.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=49	PL:DP:SP:GT:GQ	84,15,0:5:0:1/1:75
    290. 

  290. chr10	78649399	.	C	T	99	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,14;MQ=47;PV4=1,0.044,9.2e-09,1	PL:DP:SP:GT:GQ	181,0,227:28:0:0/1:99
    291. 

  291. chr10	79541428	.	C	T	38.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49	PL:DP:SP:GT:GQ	71,12,0:4:0:1/1:72
    292. 

  292. chr10	79552151	.	T	C	65	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	98,27,0:9:0:1/1:99
    293. 

  293. chr10	79553673	.	T	C	26.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42	PL:DP:SP:GT:GQ	58,6,0:2:0:1/1:49
    294. 

  294. chr10	79584178	.	G	C	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,2,7;MQ=48	PL:DP:SP:GT:GQ	133,27,0:9:0:1/1:99
    295. 

  295. chr10	79590685	.	C	T	38.1	.	DP=18;AF1=0.5064;CI95=0.5,0.5;DP4=0,1,0,6;MQ=48;PV4=1,0.032,0.16,1	PL:DP:SP:GT:GQ	68,0,16:7:0:0/1:19
    296. 

  296. chr10	79614189	.	A	G	24.8	.	DP=30;AF1=0.6243;CI95=0.5,1;DP4=0,1,1,2;MQ=49;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	54,0,4:4:0:0/1:6
    297. 

  297. chr10	79616642	.	C	T	37	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,0,6;MQ=49;PV4=0.0048,0.0084,0.068,0.076	PL:DP:SP:GT:GQ	67,0,102:10:23:0/1:70
    298. 

  298. chr10	79628875	.	A	G	27	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48	PL:DP:SP:GT:GQ	59,9,0:3:0:1/1:63
    299. 

  299. chr10	80364929	.	G	A	8.65	.	DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	38,3,0:1:0:1/1:41
    300. 

  300. chr10	81053475	.	G	A	54	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,16,0,8;MQ=49;PV4=1,4.3e-08,8.9e-06,0.15	PL:DP:SP:GT:GQ	84,0,237:24:0:0/1:87
    301. 

  301. chr10	81267889	.	A	C	13	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    302. 

  302. chr10	81274706	.	G	A	50.1	.	DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,0;MQ=41;PV4=1,1,0.07,1	PL:DP:SP:GT:GQ	80,0,15:4:0:0/1:18
    303. 

  303. chr10	81274984	.	A	C	31.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	64,12,0:4:0:1/1:72
    304. 

  304. chr10	81318820	.	G	A	30	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	60,0,89:10:0:0/1:63
    305. 

  305. chr10	81701722	.	T	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,1,3,26;MQ=46;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	230,64,0:30:0:1/1:99
    306. 

  306. chr10	81841870	.	T	C	28.5	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	61,12,0:4:0:1/1:72
    307. 

  307. chr10	82040052	.	A	G	90.2	.	DP=28;AF1=0.7303;CI95=0.5,1;DP4=0,1,4,5;MQ=48;PV4=1,0.057,0.26,1	PL:DP:SP:GT:GQ	119,0,2:10:0:0/1:3
    308. 

  308. chr10	82043576	.	G	A	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46	PL:DP:SP:GT:GQ	148,45,0:15:0:1/1:99
    309. 

  309. chr10	82182296	.	G	A	18.5	.	DP=30;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=49;PV4=1,0.38,0.26,1	PL:DP:SP:GT:GQ	47,0,1:6:0:1/1:5
    310. 

  310. chr10	84042755	.	C	T	4.13	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44	PL:DP:SP:GT:GQ	32,3,0:1:0:1/1:41
    311. 

  311. chr10	85974381	.	A	G	84	.	DP=34;AF1=1;CI95=1,1;DP4=0,0,0,31;MQ=49	PL:DP:SP:GT:GQ	117,93,0:31:0:1/1:99
    312. 

  312. chr10	85992511	.	T	C	99	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,7,5;MQ=48;PV4=0.15,6.4e-06,0.00057,1	PL:DP:SP:GT:GQ	171,0,240:23:8:0/1:99
    313. 

  313. chr10	85993836	.	A	G	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,1,9,13;MQ=46;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	255,49,0:23:0:1/1:99
    314. 

  314. chr10	85994142	.	A	G,C	50.5	.	DP=25;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47	PL:DP:SP:GT:GQ	98,27,78,15,0,78:5:0:1/1:72
    315. 

  315. chr10	86004873	.	T	C	75.1	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=49	PL:DP:SP:GT:GQ	108,21,0:7:0:1/1:84
    316. 

  316. chr10	86012713	.	C	T	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,6,18;MQ=45	PL:DP:SP:GT:GQ	255,72,0:24:0:1/1:99
    317. 

  317. chr10	86185654	.	T	G	57.1	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=49	PL:DP:SP:GT:GQ	90,21,0:7:0:1/1:84
    318. 

  318. chr10	87482991	.	C	T	4.77	.	DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.21,0.072,1	PL:DP:SP:GT:GQ	33,0,59:4:0:0/1:36
    319. 

  319. chr10	88220866	.	C	T	31	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.007,0,1	PL:DP:SP:GT:GQ	61,0,80:4:0:0/1:64
    320. 

  320. chr10	88233628	.	C	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=47	PL:DP:SP:GT:GQ	150,42,0:14:0:1/1:99
    321. 

  321. chr10	88256943	.	C	T	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=46	PL:DP:SP:GT:GQ	179,27,0:9:0:1/1:99
    322. 

  322. chr10	88677115	.	T	G	25	.	DP=22;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=49;PV4=1,0.44,0.053,1	PL:DP:SP:GT:GQ	55,0,22:8:0:0/1:25
    323. 

  323. chr10	88761481	.	T	C	36	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,5;MQ=38;PV4=1,0.066,1,0.38	PL:DP:SP:GT:GQ	66,0,112:12:0:0/1:69
    324. 

  324. chr10	88768253	.	A	G	99	.	DP=54;AF1=1;CI95=1,1;DP4=1,0,28,18;MQ=21;PV4=1,1,0.0001,1	PL:DP:SP:GT:GQ	209,116,0:47:0:1/1:99
    325. 

  325. chr10	88768657	.	C	T	99	.	DP=43;AF1=1;CI95=1,1;DP4=1,1,17,10;MQ=43;PV4=1,0.18,1,1	PL:DP:SP:GT:GQ	255,49,0:29:0:1/1:99
    326. 

  326. chr10	89469083	.	CATATATATATATATATATA	CATATATATATATATA	37.5	.	INDEL;DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=50;PV4=1,1,1,0.39	PL:DP:SP:GT:GQ	75,0,56:4:0:0/1:59
    327. 

  327. chr10	90356598	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,5,7;MQ=43	PL:DP:SP:GT:GQ	255,36,0:12:0:1/1:99
    328. 

  328. chr10	90438327	.	T	G	6.2	.	DP=41;AF1=0.4999;CI95=0.5,0.5;DP4=14,6,0,7;MQ=49;PV4=0.0019,0.00013,0.00028,1	PL:DP:SP:GT:GQ	35,0,255:27:27:0/1:38
    329. 

  329. chr10	90545972	.	T	G	84.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=48	PL:DP:SP:GT:GQ	117,18,0:6:0:1/1:90
    330. 

  330. chr10	90546007	.	A	G	39.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48	PL:DP:SP:GT:GQ	72,12,0:4:0:1/1:72
    331. 

  331. chr10	90585819	.	G	A	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,13,5;MQ=49;PV4=0.32,0.039,0.31,1	PL:DP:SP:GT:GQ	156,28,0:19:0:1/1:99
    332. 

  332. chr10	90767395	.	G	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43	PL:DP:SP:GT:GQ	167,18,0:6:0:1/1:90
    333. 

  333. chr10	90771829	.	T	C	57.5	.	DP=29;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,5;MQ=48;PV4=1,1,0.12,0.41	PL:DP:SP:GT:GQ	86,0,1:7:0:1/1:5
    334. 

  334. chr10	91066460	.	T	A	95	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,5,4;MQ=49	PL:DP:SP:GT:GQ	128,27,0:9:0:1/1:99
    335. 

  335. chr10	91099943	.	C	G	31	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	63,9,0:3:0:1/1:63
    336. 

  336. chr10	91137826	.	T	C	99	.	DP=24;AF1=1;CI95=0.5,1;DP4=1,0,13,0;MQ=45;PV4=1,1,0.07,1	PL:DP:SP:GT:GQ	182,15,0:14:0:1/1:75
    337. 

  337. chr10	91162182	.	C	T	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,1,16;MQ=49	PL:DP:SP:GT:GQ	147,51,0:17:0:1/1:99
    338. 

  338. chr10	91178000	.	C	T	99	.	DP=42;AF1=1;CI95=1,1;DP4=0,1,3,35;MQ=48;PV4=1,0.0097,0.11,1	PL:DP:SP:GT:GQ	185,83,0:39:0:1/1:99
    339. 

  339. chr10	91352966	.	G	A	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,5,13;MQ=49	PL:DP:SP:GT:GQ	173,54,0:18:0:1/1:99
    340. 

  340. chr10	91498127	.	T	C	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,2,20;MQ=47	PL:DP:SP:GT:GQ	195,66,0:22:0:1/1:99
    341. 

  341. chr10	91522605	.	G	C	99	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,1,0,9;MQ=43;PV4=1,1,0.45,1	PL:DP:SP:GT:GQ	163,14,0:10:0:1/1:70
    342. 

  342. chr10	91738755	.	T	C	71.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47	PL:DP:SP:GT:GQ	104,15,0:5:0:1/1:75
    343. 

  343. chr10	93000211	.	G	A	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=45	PL:DP:SP:GT:GQ	161,39,0:13:0:1/1:99
    344. 

  344. chr10	93257936	.	T	G	4.13	.	DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.12,1,0.46	PL:DP:SP:GT:GQ	32,0,40:6:0:0/1:34
    345. 

  345. chr10	93601285	.	G	C	38	.	DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,3;MQ=45;PV4=1,0.09,0.19,1	PL:DP:SP:GT:GQ	68,0,38:4:0:0/1:41
    346. 

  346. chr10	93604827	.	A	G	8.44	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    347. 

  347. chr10	93611176	.	ATATG	ATATGTATG	99	.	INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50	PL:DP:SP:GT:GQ	202,21,0:7:0:1/1:84
    348. 

  348. chr10	93702377	.	T	G	72	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	105,24,0:8:0:1/1:96
    349. 

  349. chr10	93778645	.	T	A	6.98	.	DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=12,1,0,6;MQ=49;PV4=0.00026,0.00012,0.0024,1	PL:DP:SP:GT:GQ	36,0,241:19:36:0/1:39
    350. 

  350. chr10	93841227	.	A	G	99	.	DP=28;AF1=1;CI95=1,1;DP4=1,0,8,13;MQ=46;PV4=0.41,1,0.053,1	PL:DP:SP:GT:GQ	255,42,0:22:0:1/1:99
    351. 

  351. chr10	94594565	.	G	A	99	.	DP=43;AF1=1;CI95=1,1;DP4=0,0,5,27;MQ=49	PL:DP:SP:GT:GQ	206,96,0:32:0:1/1:99
    352. 

  352. chr10	94688167	.	C	G	20	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,5;MQ=48;PV4=0.18,0.16,0.11,0.17	PL:DP:SP:GT:GQ	50,0,128:11:7:0/1:53
    353. 

  353. chr10	94695617	.	C	T	91	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48	PL:DP:SP:GT:GQ	124,27,0:9:0:1/1:99
    354. 

  354. chr10	94757270	.	C	T	64	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,0,5,0;MQ=46;PV4=1,0.17,0.098,1	PL:DP:SP:GT:GQ	94,0,50:7:0:0/1:53
    355. 

  355. chr10	94816807	.	GAAA	GAAAA	99	.	INDEL;DP=22;AF1=1;CI95=1,1;DP4=0,1,0,15;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	159,34,0:16:0:1/1:99
    356. 

  356. chr10	95043763	.	G	A	97	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=23	PL:DP:SP:GT:GQ	130,51,0:17:0:1/1:99
    357. 

  357. chr10	95072906	.	T	C	34.5	.	DP=49;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=49	PL:DP:SP:GT:GQ	67,12,0:4:0:1/1:72
    358. 

  358. chr10	95073046	.	A	G	66.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45	PL:DP:SP:GT:GQ	99,15,0:5:0:1/1:75
    359. 

  359. chr10	95089312	.	T	C	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45	PL:DP:SP:GT:GQ	133,15,0:5:0:1/1:75
    360. 

  360. chr10	95132905	.	C	T	18	.	DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	50,9,0:3:0:1/1:63
    361. 

  361. chr10	95162113	.	G	C	69	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=49	PL:DP:SP:GT:GQ	102,69,0:23:0:1/1:99
    362. 

  362. chr10	95164040	.	A	G	66.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46	PL:DP:SP:GT:GQ	99,15,0:5:0:1/1:75
    363. 

  363. chr10	95241999	.	A	C	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,0,26;MQ=46	PL:DP:SP:GT:GQ	164,78,0:26:0:1/1:99
    364. 

  364. chr10	95262981	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,22,9;MQ=50	PL:DP:SP:GT:GQ	161,93,0:31:0:1/1:99
    365. 

  365. chr10	95400773	.	T	G	47	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,7;MQ=48;PV4=0.22,0.047,0.064,1	PL:DP:SP:GT:GQ	77,0,43:9:0:0/1:46
    366. 

  366. chr10	95459817	.	C	T	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,10,2;MQ=49	PL:DP:SP:GT:GQ	140,36,0:12:0:1/1:99
    367. 

  367. chr10	95557593	.	T	G	32.5	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	65,12,0:4:0:1/1:72
    368. 

  368. chr10	95641536	.	A	C	34	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47	PL:DP:SP:GT:GQ	66,9,0:3:0:1/1:63
    369. 

  369. chr10	96044579	.	A	C	8.64	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=49;PV4=0.17,0.3,0.012,1	PL:DP:SP:GT:GQ	38,0,122:9:8:0/1:41
    370. 

  370. chr10	96100314	.	A	C	8.65	.	DP=12;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.23,0.27,1	PL:DP:SP:GT:GQ	38,0,26:3:0:0/1:29
    371. 

  371. chr10	96271298	.	A	C	65	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	98,27,0:9:0:1/1:99
    372. 

  372. chr10	96313960	.	A	C	22.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49	PL:DP:SP:GT:GQ	55,12,0:4:0:1/1:72
    373. 

  373. chr10	96827178	.	T	C	90	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48	PL:DP:SP:GT:GQ	123,39,0:13:0:1/1:99
    374. 

  374. chr10	97096639	.	A	T	37	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,13,8,0;MQ=48;PV4=2.8e-05,0.00047,0.0066,1	PL:DP:SP:GT:GQ	67,0,237:22:46:0/1:70
    375. 

  375. chr10	97141523	.	G	A	99	.	DP=36;AF1=1;CI95=1,1;DP4=0,0,6,26;MQ=49	PL:DP:SP:GT:GQ	235,96,0:32:0:1/1:99
    376. 

  376. chr10	97440328	.	G	A	19.1	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,3;MQ=48;PV4=1,0.4,0.0097,1	PL:DP:SP:GT:GQ	49,0,61:6:0:0/1:52
    377. 

  377. chr10	97447373	.	A	T	87	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,9,1,6;MQ=48;PV4=1,0.0014,0.00063,0.24	PL:DP:SP:GT:GQ	117,0,224:17:0:0/1:99
    378. 

  378. chr10	97605057	.	C	G	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=15,1,14,0;MQ=47;PV4=1,9.9e-10,0,1	PL:DP:SP:GT:GQ	188,0,255:30:0:0/1:99
    379. 

  379. chr10	97816749	.	C	G	39	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,2,0,7;MQ=49;PV4=0.0032,2.5e-05,0.00085,1	PL:DP:SP:GT:GQ	69,0,243:16:25:0/1:72
    380. 

  380. chr10	98082385	.	A	G	27	.	DP=9;AF1=0.5032;CI95=0.5,0.5;DP4=1,0,4,0;MQ=48;PV4=1,0.0099,0.063,0.38	PL:DP:SP:GT:GQ	57,0,19:5:0:0/1:22
    381. 

  381. chr10	98084231	.	A	G	34.5	.	DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	67,12,0:4:0:1/1:72
    382. 

  382. chr10	98092426	.	G	A	35	.	DP=21;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,4;MQ=45;PV4=1,1,0.033,1	PL:DP:SP:GT:GQ	65,0,31:6:0:0/1:34
    383. 

  383. chr10	98092427	.	G	A	39	.	DP=22;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,7;MQ=45;PV4=1,0.32,1,0.14	PL:DP:SP:GT:GQ	69,0,29:10:0:0/1:32
    384. 

  384. chr10	98144312	.	G	A	99	.	DP=42;AF1=1;CI95=1,1;DP4=0,0,36,0;MQ=49	PL:DP:SP:GT:GQ	150,108,0:36:0:1/1:99
    385. 

  385. chr10	98240035	.	A	T	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=44	PL:DP:SP:GT:GQ	211,36,0:12:0:1/1:99
    386. 

  386. chr10	98281981	.	A	C	32.1	.	DP=14;AF1=0.5129;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.044,1	PL:DP:SP:GT:GQ	62,0,13:7:0:0/1:16
    387. 

  387. chr10	98380115	.	G	C	8.64	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=4,4,4,0;MQ=48;PV4=0.21,0.11,0.11,0.38	PL:DP:SP:GT:GQ	38,0,174:12:7:0/1:41
    388. 

  388. chr10	98380277	.	C	T	76.1	.	DP=30;AF1=0.505;CI95=0.5,0.5;DP4=1,0,3,6;MQ=49;PV4=0.4,0.00077,0.27,1	PL:DP:SP:GT:GQ	106,0,17:10:0:0/1:20
    389. 

  389. chr10	98380363	.	A	G	73	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	106,24,0:8:0:1/1:96
    390. 

  390. chr10	98410947	.	A	C	49	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,0,7,0;MQ=46;PV4=1,0.32,0.072,1	PL:DP:SP:GT:GQ	79,0,38:10:0:0/1:41
    391. 

  391. chr10	99019177	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,1,17,11;MQ=47;PV4=0.41,0.24,0.18,1	PL:DP:SP:GT:GQ	255,57,0:29:0:1/1:99
    392. 

  392. chr10	99422648	.	A	G	38	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,0;MQ=49;PV4=1,3.6e-05,0.22,1	PL:DP:SP:GT:GQ	68,0,178:17:0:0/1:71
    393. 

  393. chr10	99682981	.	T	C	59	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=11,5,11,0;MQ=49;PV4=0.06,1.2e-06,0.0071,1	PL:DP:SP:GT:GQ	89,0,255:27:12:0/1:92
    394. 

  394. chr10	99969568	.	A	G	99	.	DP=64;AF1=1;CI95=1,1;DP4=0,1,28,22;MQ=50;PV4=0.45,0.0011,0.41,1	PL:DP:SP:GT:GQ	163,122,0:51:0:1/1:99
    395. 

  395. chr10	99991408	.	A	G	99	.	DP=43;AF1=1;CI95=1,1;DP4=1,1,11,25;MQ=46;PV4=0.54,1,0.052,1	PL:DP:SP:GT:GQ	255,66,0:38:3:1/1:99
    396. 

  396. chr10	100144782	.	C	T	77	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,5;MQ=48;PV4=1,5.7e-07,0.051,1	PL:DP:SP:GT:GQ	107,0,146:11:0:0/1:99
    397. 

  397. chr10	100146895	.	T	C	37	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,0.0012,0.0087,1	PL:DP:SP:GT:GQ	67,0,150:9:0:0/1:70
    398. 

  398. chr10	100147097	.	G	A	24	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,5;MQ=50;PV4=1,8.6e-09,0.095,1	PL:DP:SP:GT:GQ	54,0,210:14:0:0/1:57
    399. 

  399. chr10	100148176	.	A	G	99	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=3,10,3,14;MQ=49;PV4=1,3.3e-08,0.007,1	PL:DP:SP:GT:GQ	149,0,255:30:0:0/1:99
    400. 

  400. chr10	100155110	.	C	A	20	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,5;MQ=48;PV4=0.45,0.11,1,1	PL:DP:SP:GT:GQ	50,0,136:11:3:0/1:53
    401. 

  401. chr10	100167396	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,6,14;MQ=48	PL:DP:SP:GT:GQ	225,60,0:20:0:1/1:99
    402. 

  402. chr10	100183774	.	A	G	60.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47	PL:DP:SP:GT:GQ	93,15,0:5:0:1/1:75
    403. 

  403. chr10	100219314	.	G	A	64	.	DP=48;AF1=0.5;CI95=0.5,0.5;DP4=23,11,11,1;MQ=49;PV4=0.14,1.1e-15,9.2e-14,1	PL:DP:SP:GT:GQ	94,0,255:46:9:0/1:97
    404. 

  404. chr10	101466569	.	C	G	11.3	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42	PL:DP:SP:GT:GQ	41,3,0:1:0:1/1:41
    405. 

  405. chr10	101544447	.	A	T	99	.	DP=61;AF1=1;CI95=1,1;DP4=0,0,6,7;MQ=48	PL:DP:SP:GT:GQ	176,39,0:13:0:1/1:99
    406. 

  406. chr10	101591944	.	T	C	98	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48	PL:DP:SP:GT:GQ	131,36,0:12:0:1/1:99
    407. 

  407. chr10	101596043	.	A	C	37	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=6,9,0,11;MQ=49;PV4=0.024,0.0029,0.0014,1	PL:DP:SP:GT:GQ	67,0,255:26:16:0/1:70
    408. 

  408. chr10	101639905	.	T	A	60	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,11;MQ=48;PV4=1,0.19,0.12,1	PL:DP:SP:GT:GQ	90,0,75:17:0:0/1:78
    409. 

  409. chr10	101645498	.	T	C	99	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,4,4,1;MQ=48;PV4=0.58,0.48,0,1	PL:DP:SP:GT:GQ	138,0,255:14:2:0/1:99
    410. 

  410. chr10	101654696	.	T	C	99	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=8,3,13,1;MQ=48;PV4=0.29,1.4e-06,4.8e-09,1	PL:DP:SP:GT:GQ	142,0,255:25:5:0/1:99
    411. 

  411. chr10	101874506	.	T	C	68.3	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47	PL:DP:SP:GT:GQ	101,15,0:5:0:1/1:75
    412. 

  412. chr10	101995473	.	C	G	5.46	.	DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,1,0.12,1	PL:DP:SP:GT:GQ	34,0,60:5:0:0/1:37
    413. 

  413. chr10	101996787	.	C	G	78	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,9;MQ=47;PV4=1,0.44,0.014,1	PL:DP:SP:GT:GQ	108,0,52:13:0:0/1:55
    414. 

  414. chr10	102016044	.	C	T	49	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=3,4,4,2;MQ=48;PV4=0.59,0.0088,0.17,1	PL:DP:SP:GT:GQ	79,0,196:13:2:0/1:82
    415. 

  415. chr10	102114201	.	G	A	22	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,3,6,0;MQ=48;PV4=0.061,0.016,0.0027,0.1	PL:DP:SP:GT:GQ	52,0,144:11:12:0/1:55
    416. 

  416. chr10	102267312	.	C	G	43	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,6,0,6;MQ=48;PV4=0.23,0.24,0.0085,1	PL:DP:SP:GT:GQ	73,0,167:15:6:0/1:76
    417. 

  417. chr10	102780312	.	G	T	76	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	109,27,0:9:0:1/1:99
    418. 

  418. chr10	102796952	.	C	A	29	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,4,0,5;MQ=49;PV4=0.086,0.073,0.0025,1	PL:DP:SP:GT:GQ	59,0,203:14:11:0/1:62
    419. 

  419. chr10	103221870	.	CAGGAGGA	CAGGA	99	.	INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50	PL:DP:SP:GT:GQ	252,39,0:13:0:1/1:99
    420. 

  420. chr10	103294568	.	T	G	31	.	DP=39;AF1=0.5;CI95=0.5,0.5;DP4=2,16,1,6;MQ=49;PV4=1,9.7e-05,3.2e-05,0.12	PL:DP:SP:GT:GQ	61,0,255:25:0:0/1:64
    421. 

  421. chr10	103340168	.	C	G	24	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=47;PV4=1,1,0.19,0.14	PL:DP:SP:GT:GQ	54,0,83:7:0:0/1:57
    422. 

  422. chr10	103432592	.	A	C	37.2	.	DP=16;AF1=0.5207;CI95=0.5,1;DP4=1,0,5,0;MQ=48;PV4=1,0.016,0.031,0.11	PL:DP:SP:GT:GQ	67,0,11:6:0:0/1:14
    423. 

  423. chr10	103541948	.	C	T	20	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	52,9,0:3:0:1/1:63
    424. 

  424. chr10	104136469	.	T	C	88.5	.	DP=49;AF1=1;CI95=0.5,1;DP4=0,1,2,6;MQ=48;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	121,12,0:9:0:1/1:72
    425. 

  425. chr10	104233278	.	G	A	5.46	.	DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.035,0.44,0.48	PL:DP:SP:GT:GQ	34,0,45:6:0:0/1:37
    426. 

  426. chr10	104375258	.	G	A	55.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45	PL:DP:SP:GT:GQ	88,12,0:4:0:1/1:72
    427. 

  427. chr10	104459079	.	TAA	T	99	.	INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=50	PL:DP:SP:GT:GQ	240,30,0:10:0:1/1:99
    428. 

  428. chr10	104572276	.	A	G	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,25,1;MQ=48	PL:DP:SP:GT:GQ	159,78,0:26:0:1/1:99
    429. 

  429. chr10	105158281	.	T	G	60	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,9;MQ=48;PV4=1,0.29,9.5e-05,1	PL:DP:SP:GT:GQ	90,0,89:15:0:0/1:89
    430. 

  430. chr10	105176179	.	T	C	68.1	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	101,21,0:7:0:1/1:84
    431. 

  431. chr10	105362209	.	T	C	82.4	.	DP=80;AF1=1;CI95=0.5,1;DP4=1,0,7,5;MQ=50;PV4=1,0.037,0.32,1	PL:DP:SP:GT:GQ	115,13,0:13:0:1/1:65
    432. 

  432. chr10	105363289	.	T	C	99	.	DP=24;AF1=0.5;CI95=0…
    433.