/test-data/1_2_intersect_priority_0.vcf
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1##fileformat=VCFv4.0 2##vcfPytools=intersect /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_17.dat, /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_18.dat 3#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT chr10 chr11 4chr10 131337 . A G 56.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48 PL:DP:SP:GT:GQ 89,12,0:4:0:1/1:72 5chr10 255907 . T G 19.1 . DP=45;AF1=0.5;CI95=0.5,0.5;DP4=18,6,0,9;MQ=49;PV4=0.00013,0.00033,0.033,0.2 PL:DP:SP:GT:GQ 49,0,255:33:39:0/1:52 6chr10 282897 . C T 60 . DP=15;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=48 PL:DP:SP:GT:GQ 93,33,0:11:0:1/1:99 7chr10 292927 . C A 10.2 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 41,6,0:2:0:1/1:49 8chr10 294953 . A G 17.1 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 49,9,0:3:0:1/1:63 9chr10 329425 . T C 34 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=48;PV4=1,0.38,0.18,0.012 PL:DP:SP:GT:GQ 64,0,54:9:0:0/1:57 10chr10 373048 . T C 68 . DP=51;AF1=0.5;CI95=0.5,0.5;DP4=15,12,11,4;MQ=49;PV4=0.33,1.6e-13,0.054,1 PL:DP:SP:GT:GQ 98,0,255:42:5:0/1:99 11chr10 395463 . G A 66 . DP=32;AF1=1;CI95=1,1;DP4=0,0,0,27;MQ=49 PL:DP:SP:GT:GQ 99,81,0:27:0:1/1:99 12chr10 430502 . C G 22 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=3,12,7,0;MQ=48;PV4=0.0007,0.022,0.0017,1 PL:DP:SP:GT:GQ 52,0,234:22:32:0/1:55 13chr10 445061 . C T 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=47 PL:DP:SP:GT:GQ 255,87,0:29:0:1/1:99 14chr10 459940 . G A 36.5 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 69,12,0:4:0:1/1:72 15chr10 518547 . ACTCT ACT 99 . INDEL;DP=18;AF1=1;CI95=1,1;DP4=0,0,0,15;MQ=50 PL:DP:SP:GT:GQ 249,45,0:15:0:1/1:99 16chr10 1052950 . G A 83 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,0,10,0;MQ=48;PV4=1,8.3e-05,7.4e-07,1 PL:DP:SP:GT:GQ 113,0,228:26:0:0/1:99 17chr10 1061862 . A G 37 . DP=60;AF1=0.5;CI95=0.5,0.5;DP4=2,21,5,3;MQ=49;PV4=0.0056,3.9e-07,3e-06,1 PL:DP:SP:GT:GQ 67,0,255:31:22:0/1:70 18chr10 1142208 . T C 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,1,25;MQ=49 PL:DP:SP:GT:GQ 153,78,0:26:0:1/1:99 19chr10 1230968 . C T 67.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=46 PL:DP:SP:GT:GQ 100,12,0:4:0:1/1:72 20chr10 3054036 . T C 52.1 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48 PL:DP:SP:GT:GQ 85,18,0:6:0:1/1:90 21chr10 3143643 . A C 11.3 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 43,9,0:3:0:1/1:63 22chr10 3145906 . A C 60 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=7,0,6,0;MQ=47;PV4=1,0.0016,0.0043,1 PL:DP:SP:GT:GQ 90,0,174:13:0:0/1:93 23chr10 3155237 . A G 91 . DP=11;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=48 PL:DP:SP:GT:GQ 124,30,0:10:0:1/1:99 24chr10 3155540 . A G 99 . DP=10;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=48 PL:DP:SP:GT:GQ 132,30,0:10:0:1/1:99 25chr10 3155753 . G C 99 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=45 PL:DP:SP:GT:GQ 133,15,0:5:0:1/1:75 26chr10 3161131 . C T 18 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 27chr10 3171995 . G T 72 . DP=11;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=50 PL:DP:SP:GT:GQ 105,27,0:9:0:1/1:99 28chr10 3715278 . T C 9.31 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=26 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 29chr10 5026052 . A G 26 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 58,9,0:3:0:1/1:63 30chr10 5139685 . G A 50.1 . DP=17;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49 PL:DP:SP:GT:GQ 83,18,0:6:0:1/1:90 31chr10 5435918 . G A 75 . DP=47;AF1=0.9999;CI95=0.5,1;DP4=1,1,9,1;MQ=48;PV4=0.32,1,0.053,1 PL:DP:SP:GT:GQ 105,3,0:12:5:1/1:41 32chr10 5437365 . A G 16.1 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=7,8,1,4;MQ=49;PV4=0.6,0.00011,0.047,1 PL:DP:SP:GT:GQ 46,0,255:20:2:0/1:49 33chr10 5471122 . T C 9.69 . DP=10;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 38,0,2:4:0:0/1:3 34chr10 5471251 . T G 3.54 . DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.43,0.21,1 PL:DP:SP:GT:GQ 31,0,32:4:0:0/1:31 35chr10 5667066 . C A 19.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 51,6,0:2:0:1/1:49 36chr10 5693379 . A G 20.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46 PL:DP:SP:GT:GQ 52,6,0:2:0:1/1:49 37chr10 5781969 . A T 99 . DP=51;AF1=1;CI95=1,1;DP4=0,1,23,22;MQ=48;PV4=1,0.3,0.26,1 PL:DP:SP:GT:GQ 254,113,0:46:0:1/1:99 38chr10 5790420 . T C 99 . DP=51;AF1=1;CI95=1,1;DP4=1,0,17,25;MQ=49;PV4=0.42,0.046,0.29,1 PL:DP:SP:GT:GQ 237,97,0:43:0:1/1:99 39chr10 5804633 . TTC TTCTC 99 . INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=50;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 145,0,108:9:0:0/1:99 40chr10 5978411 . T C 3.54 . DP=34;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,3;MQ=50;PV4=0.4,0.05,0.25,1 PL:DP:SP:GT:GQ 31,0,37:5:0:0/1:33 41chr10 6063674 . T C 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,0,29;MQ=46 PL:DP:SP:GT:GQ 183,87,0:29:0:1/1:99 42chr10 6148059 . A G 19 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 51,9,0:3:0:1/1:63 43chr10 6156118 . T C 92 . DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48 PL:DP:SP:GT:GQ 125,39,0:13:0:1/1:99 44chr10 6258015 . T C 73 . DP=23;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=49 PL:DP:SP:GT:GQ 106,54,0:18:0:1/1:99 45chr10 6258052 . G A 97 . DP=36;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=48 PL:DP:SP:GT:GQ 130,54,0:18:0:1/1:99 46chr10 6335597 . C T 23 . DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0078,0.012,0.12 PL:DP:SP:GT:GQ 53,0,76:5:0:0/1:56 47chr10 6335700 . G A 99 . DP=14;AF1=1;CI95=0.5,1;DP4=1,0,7,6;MQ=46;PV4=1,0.27,0.15,1 PL:DP:SP:GT:GQ 204,10,0:14:0:1/1:60 48chr10 7285632 . A G 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=43 PL:DP:SP:GT:GQ 255,33,0:11:0:1/1:99 49chr10 7318803 . T C 99 . DP=11;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=45;PV4=1,1,0.017,0.22 PL:DP:SP:GT:GQ 160,5,0:9:0:1/1:46 50chr10 7605101 . A G 77.1 . DP=28;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=49 PL:DP:SP:GT:GQ 110,21,0:7:0:1/1:84 51chr10 7618686 . T G 26.5 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=50 PL:DP:SP:GT:GQ 59,12,0:4:0:1/1:72 52chr10 7763661 . A G 99 . DP=47;AF1=1;CI95=1,1;DP4=0,0,8,8;MQ=49 PL:DP:SP:GT:GQ 161,48,0:16:0:1/1:99 53chr10 7773976 . A G 99 . DP=39;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=44 PL:DP:SP:GT:GQ 255,66,0:22:0:1/1:99 54chr10 7788495 . T C 99 . DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=44 PL:DP:SP:GT:GQ 181,24,0:8:0:1/1:96 55chr10 7866268 . C G 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,23,2;MQ=45 PL:DP:SP:GT:GQ 252,75,0:25:0:1/1:99 56chr10 8006644 . A G 36 . DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,0,0,9;MQ=48;PV4=2e-06,3.5e-17,6.7e-07,1 PL:DP:SP:GT:GQ 66,0,230:22:57:0/1:69 57chr10 8093034 . G T 99 . DP=18;AF1=1;CI95=1,1;DP4=0,1,13,2;MQ=47;PV4=0.19,1,0.098,0.22 PL:DP:SP:GT:GQ 197,29,0:16:0:1/1:99 58chr10 8093185 . T C 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46 PL:DP:SP:GT:GQ 146,24,0:8:0:1/1:96 59chr10 8111621 . C T 19.1 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,4;MQ=49;PV4=0.43,0.12,0.13,1 PL:DP:SP:GT:GQ 49,0,84:7:0:0/1:52 60chr10 9765758 . A G 15.9 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47 PL:DP:SP:GT:GQ 47,6,0:2:0:1/1:49 61chr10 11299735 . A T 42.3 . DP=38;AF1=0.5336;CI95=0.5,1;DP4=0,1,3,2;MQ=49;PV4=1,0.16,0.29,1 PL:DP:SP:GT:GQ 72,0,9:6:0:0/1:12 62chr10 11356093 . TTTT TTTTGTTT 99 . INDEL;DP=42;AF1=0.95;CI95=0.5,1;DP4=1,2,11,15;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 255,15,15:29:0:1/1:10 63chr10 11356094 . TTT TTTGTT 99 . INDEL;DP=43;AF1=0.5;CI95=0.5,0.5;DP4=1,2,5,0;MQ=50;PV4=0.11,1,1,1 PL:DP:SP:GT:GQ 149,0,70:8:10:0/1:73 64chr10 11356095 . TT TTGT 70.5 . INDEL;DP=41;AF1=0.5;CI95=0.5,0.5;DP4=1,6,5,1;MQ=50;PV4=0.029,1,1,1 PL:DP:SP:GT:GQ 108,0,118:13:15:0/1:99 65chr10 11789382 . G A 99 . DP=57;AF1=1;CI95=1,1;DP4=0,1,30,20;MQ=49;PV4=0.41,0.21,0.29,1 PL:DP:SP:GT:GQ 251,127,0:51:0:1/1:99 66chr10 11789511 . C G 99 . DP=41;AF1=1;CI95=1,1;DP4=0,0,4,31;MQ=49 PL:DP:SP:GT:GQ 205,105,0:35:0:1/1:99 67chr10 11797467 . G A 99 . DP=25;AF1=0.7303;CI95=0.5,1;DP4=0,2,2,15;MQ=47;PV4=1,0.16,0.1,1 PL:DP:SP:GT:GQ 153,0,2:19:0:0/1:3 68chr10 11978499 . T G 49 . DP=39;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49 PL:DP:SP:GT:GQ 82,24,0:8:0:1/1:96 69chr10 12191620 . C A 32 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,0,7;MQ=48;PV4=0.00025,0.00053,0.0011,1 PL:DP:SP:GT:GQ 62,0,222:18:36:0/1:65 70chr10 12198019 . G A 99 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,10;MQ=46;PV4=1,0.043,6.9e-16,1 PL:DP:SP:GT:GQ 179,0,186:18:0:0/1:99 71chr10 12200125 . C T 99 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45 PL:DP:SP:GT:GQ 133,21,0:7:0:1/1:84 72chr10 12202866 . A T 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,21,0;MQ=47 PL:DP:SP:GT:GQ 154,63,0:21:0:1/1:99 73chr10 12209752 . T C 99 . DP=47;AF1=0.5;CI95=0.5,0.5;DP4=10,12,9,14;MQ=49;PV4=0.77,7.1e-16,0.22,1 PL:DP:SP:GT:GQ 142,0,255:45:1:0/1:99 74chr10 12292344 . A G 78 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,15;MQ=48;PV4=1,2.1e-13,6.2e-06,0.3 PL:DP:SP:GT:GQ 108,0,217:27:0:0/1:99 75chr10 12858045 . G A 99 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=6,0,6,0;MQ=47;PV4=1,6e-05,0,1 PL:DP:SP:GT:GQ 132,0,169:12:0:0/1:99 76chr10 12858409 . A G 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=44 PL:DP:SP:GT:GQ 213,39,0:13:0:1/1:99 77chr10 12867598 . C G 81 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=12,6,8,4;MQ=50;PV4=1,2.5e-07,0.01,1 PL:DP:SP:GT:GQ 111,0,255:30:0:0/1:99 78chr10 13100381 . A G 41 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,2,5,0;MQ=47;PV4=0.17,0.11,0.35,0.16 PL:DP:SP:GT:GQ 71,0,101:9:8:0/1:74 79chr10 13214812 . A G 23 . DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,0,6;MQ=47;PV4=1,0.0037,0.31,1 PL:DP:SP:GT:GQ 53,0,29:7:0:0/1:32 80chr10 13237015 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=47;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 155,40,0:21:0:1/1:99 81chr10 13275514 . A G 33.4 . DP=17;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=50;PV4=1,1,0.37,1 PL:DP:SP:GT:GQ 66,13,0:9:0:1/1:65 82chr10 13276179 . A G 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=46 PL:DP:SP:GT:GQ 154,24,0:8:0:1/1:96 83chr10 13337588 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=46 PL:DP:SP:GT:GQ 164,57,0:19:0:1/1:99 84chr10 13375906 . T C 99 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=43 PL:DP:SP:GT:GQ 141,15,0:5:0:1/1:75 85chr10 13541724 . TA TAAAACA 99 . INDEL;DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,1,7,1;MQ=50;PV4=1,0.14,0.074,0.0027 PL:DP:SP:GT:GQ 166,0,255:25:0:0/1:99 86chr10 13653675 . T C 73 . DP=53;AF1=0.5;CI95=0.5,0.5;DP4=13,2,0,16;MQ=48;PV4=5.1e-07,0.012,0.0041,1 PL:DP:SP:GT:GQ 103,0,214:31:63:0/1:99 87chr10 13743391 . C A 33 . DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,6;MQ=48;PV4=1,0.44,0.041,1 PL:DP:SP:GT:GQ 63,0,87:12:0:0/1:66 88chr10 13782605 . G A 99 . DP=38;AF1=1;CI95=1,1;DP4=0,0,1,32;MQ=48 PL:DP:SP:GT:GQ 181,99,0:33:0:1/1:99 89chr10 15014418 . C G 44.1 . DP=10;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=47 PL:DP:SP:GT:GQ 77,21,0:7:0:1/1:84 90chr10 15014440 . A G 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,16,0;MQ=47 PL:DP:SP:GT:GQ 155,48,0:16:0:1/1:99 91chr10 15014698 . C T 12.3 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.13,0.008,1 PL:DP:SP:GT:GQ 42,0,96:5:0:0/1:45 92chr10 15290696 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,12,0,10;MQ=46;PV4=1,0.17,0.0046,1 PL:DP:SP:GT:GQ 129,0,201:23:0:0/1:99 93chr10 15713541 . T C 60.5 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45 PL:DP:SP:GT:GQ 93,12,0:4:0:1/1:72 94chr10 15729923 . C T 99 . DP=37;AF1=1;CI95=1,1;DP4=0,0,33,0;MQ=47 PL:DP:SP:GT:GQ 147,99,0:33:0:1/1:99 95chr10 16797033 . A G 82 . DP=23;AF1=1;CI95=1,1;DP4=0,1,0,21;MQ=48;PV4=1,0.011,0.23,1 PL:DP:SP:GT:GQ 115,29,0:22:0:1/1:99 96chr10 16967401 . C T 13 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 97chr10 16979751 . T A 23 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=9,5,0,7;MQ=49;PV4=0.0071,4.6e-05,0.014,1 PL:DP:SP:GT:GQ 53,0,255:21:21:0/1:56 98chr10 17151714 . CTCTTC CTC 5.8 . INDEL;DP=23;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,2;MQ=50;PV4=0.33,0.5,1,1 PL:DP:SP:GT:GQ 42,0,28:3:0:0/1:31 99chr10 17156151 . A G 43.4 . DP=18;AF1=0.5554;CI95=0.5,1;DP4=0,2,5,1;MQ=49;PV4=0.11,1,0.073,0.32 PL:DP:SP:GT:GQ 73,0,7:8:10:0/1:10 100chr10 17157630 . C T 99 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=2,9,4,23;MQ=49;PV4=1,4.7e-10,0.012,0.018 PL:DP:SP:GT:GQ 180,0,213:38:0:0/1:99 101chr10 17199419 . C G 63 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43 PL:DP:SP:GT:GQ 95,9,0:3:0:1/1:63 102chr10 17216556 . C T 92 . DP=24;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=47 PL:DP:SP:GT:GQ 125,33,0:11:0:1/1:99 103chr10 17645814 . C T 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=45 PL:DP:SP:GT:GQ 138,15,0:5:0:1/1:75 104chr10 17646088 . T C,A 9.93 . DP=13;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,1,0.12,0.073 PL:DP:SP:GT:GQ 66,28,37,29,0,46:6:0:1/1:5 105chr10 18138639 . A G 98.3 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=44 PL:DP:SP:GT:GQ 131,15,0:5:0:1/1:75 106chr10 18242304 . T C 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,8,15;MQ=46 PL:DP:SP:GT:GQ 255,69,0:23:0:1/1:99 107chr10 18439747 . C T 51.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=46 PL:DP:SP:GT:GQ 84,12,0:4:0:1/1:72 108chr10 18596796 . A T 11.1 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 42,6,0:2:0:1/1:49 109chr10 18903605 . A C 29 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45 PL:DP:SP:GT:GQ 61,9,0:3:0:1/1:63 110chr10 18931512 . T C 99 . DP=22;AF1=1;CI95=1,1;DP4=0,1,0,20;MQ=44;PV4=1,1,0.0023,1 PL:DP:SP:GT:GQ 222,47,0:21:0:1/1:99 111chr10 18937579 . AAAGAAG AAAGAAGAAG 99 . INDEL;DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 140,0,23:5:0:0/1:26 112chr10 20462052 . A AGTCGTCT 12.7 . INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 113chr10 20506418 . G A 99 . DP=55;AF1=0.5;CI95=0.5,0.5;DP4=18,11,11,12;MQ=48;PV4=0.4,5.8e-12,7.3e-17,1 PL:DP:SP:GT:GQ 207,0,255:52:4:0/1:99 114chr10 20534333 . A G 99 . DP=55;AF1=0.5;CI95=0.5,0.5;DP4=22,11,9,4;MQ=48;PV4=1,5.1e-06,2.8e-15,0.003 PL:DP:SP:GT:GQ 200,0,255:46:0:0/1:99 115chr10 20568524 . T C 58.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46 PL:DP:SP:GT:GQ 91,15,0:5:0:1/1:75 116chr10 21120116 . A G 99 . DP=24;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=46;PV4=1,0.24,0.15,1 PL:DP:SP:GT:GQ 138,31,0:21:0:1/1:99 117chr10 21141469 . T C 45 . DP=11;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=50 PL:DP:SP:GT:GQ 78,24,0:8:0:1/1:96 118chr10 21176945 . G A 9.53 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 39,3,0:1:0:1/1:41 119chr10 21178780 . A G 43 . DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,5,0;MQ=48;PV4=0.29,0.3,0.081,1 PL:DP:SP:GT:GQ 73,0,33:7:0:0/1:36 120chr10 21414892 . C G 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,3,28;MQ=49 PL:DP:SP:GT:GQ 201,93,0:31:0:1/1:99 121chr10 22171185 . A C 6.98 . DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,3,0;MQ=48;PV4=1,0.35,1,0.33 PL:DP:SP:GT:GQ 36,0,62:7:0:0/1:39 122chr10 22830719 . G C 99 . DP=35;AF1=0.8277;CI95=0.5,1;DP4=2,1,21,7;MQ=48;PV4=1,0.046,0.098,1 PL:DP:SP:GT:GQ 201,0,1:31:0:1/1:5 123chr10 22898553 . T G 12.3 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=8,0,4,0;MQ=48;PV4=1,0.039,0.047,1 PL:DP:SP:GT:GQ 42,0,146:12:0:0/1:45 124chr10 24786291 . A G 13.2 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 43,3,0:1:0:1/1:41 125chr10 24889901 . T G 94 . DP=23;AF1=1;CI95=1,1;DP4=0,1,0,19;MQ=47;PV4=1,0.38,0.15,1 PL:DP:SP:GT:GQ 127,33,0:20:0:1/1:99 126chr10 25888180 . A G 95.4 . DP=43;AF1=1;CI95=0.5,1;DP4=0,1,9,2;MQ=48;PV4=0.25,0.45,0.19,1 PL:DP:SP:GT:GQ 128,13,0:12:0:1/1:65 127chr10 25998967 . T G 12.3 . DP=4;AF1=0.501;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,1,0.019,1 PL:DP:SP:GT:GQ 42,0,24:4:0:0/1:27 128chr10 26357748 . G A 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,8,7;MQ=48;PV4=0.75,7.4e-08,7.6e-11,1 PL:DP:SP:GT:GQ 213,0,255:37:1:0/1:99 129chr10 26463130 . C A 99 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,6,8,7;MQ=49;PV4=1,3.4e-16,0.024,1 PL:DP:SP:GT:GQ 161,0,255:28:0:0/1:99 130chr10 26463507 . A G 9.31 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 131chr10 26781388 . G A 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,0,18;MQ=48 PL:DP:SP:GT:GQ 150,54,0:18:0:1/1:99 132chr10 27009334 . A G 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,0,22;MQ=48 PL:DP:SP:GT:GQ 141,66,0:22:0:1/1:99 133chr10 27405096 . A G 38 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=10,1,4,1;MQ=49;PV4=1,0.0018,0.0067,1 PL:DP:SP:GT:GQ 68,0,246:16:0:0/1:71 134chr10 27409555 . G A 37.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 70,12,0:4:0:1/1:72 135chr10 27423744 . T C 42 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,2,5,3;MQ=49;PV4=0.61,4.2e-09,1,0.33 PL:DP:SP:GT:GQ 72,0,255:18:2:0/1:75 136chr10 27456003 . G A 23 . DP=27;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 55,9,0:3:0:1/1:63 137chr10 27506854 . C T 63.1 . DP=13;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 96,21,0:7:0:1/1:84 138chr10 27536428 . T C 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,10,8;MQ=31 PL:DP:SP:GT:GQ 255,54,0:18:0:1/1:99 139chr10 27577568 . G A 53.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47 PL:DP:SP:GT:GQ 86,15,0:5:0:1/1:75 140chr10 27629880 . T C 29.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46 PL:DP:SP:GT:GQ 61,6,0:2:0:1/1:49 141chr10 27687775 . T C 47.3 . DP=21;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=50 PL:DP:SP:GT:GQ 80,15,0:5:0:1/1:75 142chr10 27687965 . A G 99 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=11,4,5,6;MQ=47;PV4=0.23,1,1.1e-12,1 PL:DP:SP:GT:GQ 255,0,255:26:6:0/1:99 143chr10 27692099 . A G 98.2 . DP=17;AF1=0.5207;CI95=0.5,1;DP4=1,0,12,0;MQ=47;PV4=1,0.0035,0.12,1 PL:DP:SP:GT:GQ 128,0,11:13:0:0/1:14 144chr10 27692371 . T G 91 . DP=20;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=48 PL:DP:SP:GT:GQ 124,42,0:14:0:1/1:99 145chr10 28223886 . A C 40 . DP=26;AF1=0.5006;CI95=0.5,0.5;DP4=3,0,7,0;MQ=48;PV4=1,1,0.0037,1 PL:DP:SP:GT:GQ 70,0,26:10:0:0/1:29 146chr10 28228865 . A G 99 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=14,6,4,7;MQ=47;PV4=0.13,0.00015,1.7e-08,1 PL:DP:SP:GT:GQ 208,0,255:31:9:0/1:99 147chr10 29760209 . C T 81 . DP=14;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=49 PL:DP:SP:GT:GQ 114,36,0:12:0:1/1:99 148chr10 29822032 . C T 99 . DP=22;AF1=1;CI95=0.5,1;DP4=1,0,11,6;MQ=49;PV4=1,6.3e-06,0.29,0.47 PL:DP:SP:GT:GQ 137,7,0:18:0:1/1:57 149chr10 29839787 . A G 99 . DP=44;AF1=1;CI95=1,1;DP4=0,1,19,17;MQ=48;PV4=0.49,1,0.28,1 PL:DP:SP:GT:GQ 255,91,0:37:0:1/1:99 150chr10 29839864 . A C 99 . DP=42;AF1=1;CI95=1,1;DP4=2,0,19,16;MQ=47;PV4=0.5,1,0.39,1 PL:DP:SP:GT:GQ 255,75,0:37:3:1/1:99 151chr10 29921156 . T C 10.4 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43 PL:DP:SP:GT:GQ 40,3,0:1:0:1/1:41 152chr10 30611459 . C A 33 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=5,5,0,8;MQ=49;PV4=0.036,0.0066,0.015,1 PL:DP:SP:GT:GQ 63,0,233:18:14:0/1:66 153chr10 30669878 . G C 38.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43 PL:DP:SP:GT:GQ 70,6,0:2:0:1/1:49 154chr10 30749895 . G A 62.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46 PL:DP:SP:GT:GQ 95,12,0:4:0:1/1:72 155chr10 30993448 . G A 58.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47 PL:DP:SP:GT:GQ 91,15,0:5:0:1/1:75 156chr10 31005822 . C T 76.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43 PL:DP:SP:GT:GQ 109,12,0:4:0:1/1:72 157chr10 31134557 . T C 43.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 76,12,0:4:0:1/1:72 158chr10 31803516 . G A 17.7 . DP=10;AF1=0.5939;CI95=0.5,1;DP4=1,0,2,1;MQ=47;PV4=1,1,0.4,1 PL:DP:SP:GT:GQ 47,0,5:4:0:0/1:7 159chr10 32103171 . G A 8.64 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=47;PV4=1,0.013,0.31,0.065 PL:DP:SP:GT:GQ 38,0,65:7:0:0/1:41 160chr10 33552696 . A G 99 . DP=54;AF1=1;CI95=1,1;DP4=1,0,35,10;MQ=49;PV4=1,0.012,0.36,1 PL:DP:SP:GT:GQ 192,106,0:46:0:1/1:99 161chr10 34620220 . C T 99 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,7;MQ=47;PV4=1,0.069,0.0033,0.44 PL:DP:SP:GT:GQ 166,0,149:13:0:0/1:99 162chr10 34688287 . G A 99 . DP=50;AF1=1;CI95=1,1;DP4=1,1,22,20;MQ=48;PV4=1,0.043,0.043,1 PL:DP:SP:GT:GQ 255,70,0:44:0:1/1:99 163chr10 35805284 . A C 61.3 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47 PL:DP:SP:GT:GQ 94,15,0:5:0:1/1:75 164chr10 38246545 . A G 52 . DP=21;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,0,10;MQ=48;PV4=1,0.059,1,1 PL:DP:SP:GT:GQ 82,0,27:12:0:0/1:30 165chr10 38344124 . C G 48 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=5,5,2,7;MQ=39;PV4=0.35,0.45,0.00022,1 PL:DP:SP:GT:GQ 78,0,202:19:5:0/1:81 166chr10 38599101 . CTT CTTT 44.5 . INDEL;DP=9;AF1=0.505;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,1,1,0.21 PL:DP:SP:GT:GQ 82,0,17:4:0:0/1:20 167chr10 38934239 . A T 7.81 . DP=5;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,0,3;MQ=48;PV4=0.25,0.031,1,0.18 PL:DP:SP:GT:GQ 37,0,20:4:0:0/1:23 168chr10 42384737 . C T 53 . DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,8,10,10;MQ=16;PV4=1,0.25,1,1 PL:DP:SP:GT:GQ 83,0,51:36:0:0/1:54 169chr10 42394484 . T C 44 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=8,7,7,7;MQ=17;PV4=1,4.2e-07,1,1 PL:DP:SP:GT:GQ 74,0,74:29:0:0/1:74 170chr10 42396883 . A C 63.5 . DP=79;AF1=1;CI95=0.5,1;DP4=0,1,6,4;MQ=33;PV4=0.45,0.073,0.095,1 PL:DP:SP:GT:GQ 95,7,0:11:0:1/1:57 171chr10 43089965 . G A 40 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46 PL:DP:SP:GT:GQ 72,9,0:3:0:1/1:63 172chr10 43209943 . G A 99 . DP=9;AF1=1;CI95=0.5,1;DP4=0,1,2,5;MQ=42;PV4=1,1,0.42,0.15 PL:DP:SP:GT:GQ 170,7,0:8:0:1/1:57 173chr10 43606687 . A G 99 . DP=56;AF1=0.5;CI95=0.5,0.5;DP4=1,7,16,10;MQ=46;PV4=0.039,0.45,0.0054,0.39 PL:DP:SP:GT:GQ 255,0,74:34:14:0/1:77 174chr10 43617515 . T C 20 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,17,0,5;MQ=49;PV4=1,0.085,1.1e-05,0.25 PL:DP:SP:GT:GQ 50,0,234:23:0:0/1:53 175chr10 43694394 . A C 24 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,2,5,0;MQ=49;PV4=0.51,0.42,0.032,0.44 PL:DP:SP:GT:GQ 54,0,128:14:3:0/1:57 176chr10 43883342 . T A 99 . DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=48 PL:DP:SP:GT:GQ 137,39,0:13:0:1/1:99 177chr10 44104137 . G T 20 . DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,5,5,0;MQ=49;PV4=0.086,0.098,0.029,0.37 PL:DP:SP:GT:GQ 50,0,182:14:11:0/1:53 178chr10 45357413 . A T 32.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44 PL:DP:SP:GT:GQ 64,6,0:2:0:1/1:49 179chr10 45423282 . C G 25 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.064,0.065,1 PL:DP:SP:GT:GQ 55,0,113:7:0:0/1:58 180chr10 45622885 . C T 33.8 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45 PL:DP:SP:GT:GQ 65,6,0:2:0:1/1:49 181chr10 45799379 . TG TGGG 12.7 . INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 182chr10 45924023 . G A 92.5 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43 PL:DP:SP:GT:GQ 125,12,0:4:0:1/1:72 183chr10 46998795 . A G 65 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,0.0058,0.26,0.15 PL:DP:SP:GT:GQ 95,0,134:12:0:0/1:98 184chr10 46998894 . G A 99 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,17;MQ=48;PV4=1,3.8e-16,3.8e-06,0.3 PL:DP:SP:GT:GQ 132,0,221:30:0:0/1:99 185chr10 46999465 . A G 34 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=49;PV4=1,0.0044,0.081,0.47 PL:DP:SP:GT:GQ 64,0,100:11:0:0/1:67 186chr10 46999591 . CATGAGGGAG CATGAGGGAGATGAGGGAG 99 . INDEL;DP=24;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=50;PV4=0.44,1,1,1 PL:DP:SP:GT:GQ 206,11,0:9:0:1/1:66 187chr10 46999604 . A G 12.3 . DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,0.11,0.16,1 PL:DP:SP:GT:GQ 42,0,85:9:0:0/1:45 188chr10 46999747 . T C 80 . DP=66;AF1=0.5;CI95=0.5,0.5;DP4=10,11,3,13;MQ=49;PV4=0.091,1.1e-09,0.0043,1 PL:DP:SP:GT:GQ 110,0,255:37:10:0/1:99 189chr10 47000004 . T C 99 . DP=33;AF1=1;CI95=0.5,1;DP4=1,1,11,8;MQ=47;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 217,17,0:21:0:1/1:85 190chr10 47087608 . T C 99 . DP=44;AF1=0.7303;CI95=0.5,1;DP4=1,1,3,9;MQ=48;PV4=0.51,1,0.096,1 PL:DP:SP:GT:GQ 128,0,2:14:3:0/1:3 191chr10 47087680 . C T 99 . DP=35;AF1=1;CI95=1,1;DP4=0,0,9,18;MQ=45 PL:DP:SP:GT:GQ 255,81,0:27:0:1/1:99 192chr10 47087731 . C T 99 . DP=62;AF1=1;CI95=1,1;DP4=0,0,34,21;MQ=48 PL:DP:SP:GT:GQ 255,166,0:55:0:1/1:99 193chr10 47728608 . T C 47 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=7,4,3,2;MQ=32;PV4=1,1,1,1 PL:DP:SP:GT:GQ 77,0,78:16:0:0/1:77 194chr10 48386110 . T C 99 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,6,1,13;MQ=48;PV4=1,4.7e-07,0.00011,1 PL:DP:SP:GT:GQ 144,0,145:20:0:0/1:99 195chr10 48414570 . A G 81 . DP=23;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,0,18;MQ=47;PV4=0.1,0.00023,0.0076,1 PL:DP:SP:GT:GQ 111,0,29:20:0:0/1:32 196chr10 49661341 . A G 99 . DP=32;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=48 PL:DP:SP:GT:GQ 242,87,0:29:0:1/1:99 197chr10 50227785 . T C 46.5 . DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48 PL:DP:SP:GT:GQ 79,12,0:4:0:1/1:72 198chr10 50227927 . C A 33.1 . DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50 PL:DP:SP:GT:GQ 66,21,0:7:0:1/1:84 199chr10 50691360 . T C 65 . DP=20;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=48 PL:DP:SP:GT:GQ 98,24,0:8:0:1/1:96 200chr10 50724016 . C T 7.59 . DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49 PL:DP:SP:GT:GQ 38,6,0:2:0:1/1:49 201chr10 50820345 . C A 99 . DP=16;AF1=1;CI95=0.5,1;DP4=0,1,9,4;MQ=48;PV4=0.36,0.15,0.22,1 PL:DP:SP:GT:GQ 152,14,0:14:0:1/1:70 202chr10 50856652 . G A 54.5 . DP=10;AF1=0.9998;CI95=0.5,1;DP4=0,1,0,5;MQ=47;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 84,2,0:6:0:1/1:37 203chr10 50902684 . C T 99 . DP=41;AF1=1;CI95=1,1;DP4=0,1,0,30;MQ=46;PV4=1,1,0.088,1 PL:DP:SP:GT:GQ 187,77,0:31:0:1/1:99 204chr10 50944009 . T C 99 . DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=42 PL:DP:SP:GT:GQ 182,24,0:8:0:1/1:96 205chr10 51532367 . A G 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,4,10;MQ=29 PL:DP:SP:GT:GQ 164,42,0:14:0:1/1:99 206chr10 51549496 . T C 94 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,11,1;MQ=48;PV4=1,8.6e-08,8.3e-08,1 PL:DP:SP:GT:GQ 124,0,180:20:0:0/1:99 207chr10 51549545 . G T 97 . DP=39;AF1=1;CI95=1,1;DP4=0,0,12,1;MQ=49 PL:DP:SP:GT:GQ 130,39,0:13:0:1/1:99 208chr10 52390836 . A G 99 . DP=8;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46 PL:DP:SP:GT:GQ 150,24,0:8:0:1/1:96 209chr10 52419433 . G A 7.8 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37 PL:DP:SP:GT:GQ 37,3,0:1:0:1/1:41 210chr10 52576068 . G A 97 . DP=39;AF1=1;CI95=1,1;DP4=0,1,0,31;MQ=48;PV4=1,1,0.19,1 PL:DP:SP:GT:GQ 130,79,0:32:0:1/1:99 211chr10 53457421 . A G 3.54 . DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,3,0;MQ=50;PV4=1,0.059,0.11,0.15 PL:DP:SP:GT:GQ 31,0,80:8:0:0/1:34 212chr10 54148888 . C A 47 . DP=11;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=38 PL:DP:SP:GT:GQ 80,33,0:11:0:1/1:99 213chr10 54528266 . G C 99 . DP=13;AF1=1;CI95=1,1;DP4=0,0,6,2;MQ=45 PL:DP:SP:GT:GQ 190,24,0:8:0:1/1:96 214chr10 54528298 . G C 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=45 PL:DP:SP:GT:GQ 159,48,0:16:0:1/1:99 215chr10 54528353 . C G 69.1 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48 PL:DP:SP:GT:GQ 102,21,0:7:0:1/1:84 216chr10 55719652 . C T 56 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50 PL:DP:SP:GT:GQ 89,27,0:9:0:1/1:99 217chr10 55779909 . G C 52 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,11,0;MQ=49;PV4=1,0.023,0.19,1 PL:DP:SP:GT:GQ 82,0,73:16:0:0/1:75 218chr10 58118630 . T C 29.5 . DP=49;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,1,0.25,1 PL:DP:SP:GT:GQ 58,0,1:5:0:1/1:5 219chr10 58119976 . G A 51.3 . DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=48 PL:DP:SP:GT:GQ 84,15,0:5:0:1/1:75 220chr10 59958956 . C A 14.2 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.021,0.092,1 PL:DP:SP:GT:GQ 44,0,99:6:0:0/1:47 221chr10 60996453 . G A 69 . DP=24;AF1=1;CI95=1,1;DP4=0,1,0,13;MQ=49;PV4=1,1,0.2,1 PL:DP:SP:GT:GQ 102,25,0:14:0:1/1:99 222chr10 61005244 . G C 99 . DP=40;AF1=1;CI95=1,1;DP4=0,0,5,22;MQ=48 PL:DP:SP:GT:GQ 230,81,0:27:0:1/1:99 223chr10 61083689 . CAG CAGTTAG 38.7 . INDEL;DP=28;AF1=0.5263;CI95=0.5,1;DP4=3,0,17,0;MQ=50;PV4=1,0.0041,1,1 PL:DP:SP:GT:GQ 76,0,10:20:0:0/1:13 224chr10 61083690 . AG AGTTGG 99 . INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,0,19,0;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 235,0,37:23:0:0/1:40 225chr10 61122268 . TG TTAG,TGTTAG 99 . INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50 PL:DP:SP:GT:GQ 242,47,204,23,0,201:9:0:1/1:96 226chr10 61311416 . TAAA TAA 93.6 . INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50 PL:DP:SP:GT:GQ 134,18,0:6:0:1/1:90 227chr10 61552878 . G A 4.77 . DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,3;MQ=50;PV4=1,0.0038,0.34,0.25 PL:DP:SP:GT:GQ 33,0,31:5:0:0/1:32 228chr10 61802577 . TCC TCCC 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50 PL:DP:SP:GT:GQ 187,39,0:13:0:1/1:99 229chr10 61815335 . C A,G 58.1 . DP=25;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49 PL:DP:SP:GT:GQ 91,21,83,0,4,83:8:0:1/1:84 230chr10 61819049 . T G 99 . DP=23;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=47 PL:DP:SP:GT:GQ 149,51,0:17:0:1/1:99 231chr10 62553763 . A G 86 . DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=48 PL:DP:SP:GT:GQ 119,30,0:10:0:1/1:99 232chr10 63995983 . C T 94.8 . DP=15;AF1=1;CI95=0.5,1;DP4=0,1,2,9;MQ=48;PV4=1,0.27,0.22,1 PL:DP:SP:GT:GQ 127,10,0:12:0:1/1:60 233chr10 64005711 . C T 81.1 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=46 PL:DP:SP:GT:GQ 114,18,0:6:0:1/1:90 234chr10 64415184 . A G 99 . DP=46;AF1=1;CI95=1,1;DP4=0,0,32,11;MQ=48 PL:DP:SP:GT:GQ 248,129,0:43:0:1/1:99 235chr10 64573771 . C T 99 . DP=26;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=43 PL:DP:SP:GT:GQ 233,69,0:23:0:1/1:99 236chr10 64967445 . A T 99 . DP=49;AF1=1;CI95=1,1;DP4=0,0,23,17;MQ=49 PL:DP:SP:GT:GQ 246,120,0:40:0:1/1:99 237chr10 69583206 . G A 6.23 . DP=5;AF1=0.505;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.029,0.33,1 PL:DP:SP:GT:GQ 35,0,17:4:0:0/1:20 238chr10 69934467 . A G 40 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=50 PL:DP:SP:GT:GQ 73,24,0:8:0:1/1:96 239chr10 70051928 . A G 99 . DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,5,8;MQ=48;PV4=0.31,0.013,5.8e-34,1 PL:DP:SP:GT:GQ 251,0,255:35:5:0/1:99 240chr10 70143774 . C T 46 . DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,3;MQ=47;PV4=1,0.002,0.064,1 PL:DP:SP:GT:GQ 76,0,82:6:0:0/1:78 241chr10 70405855 . A G 99 . DP=13;AF1=1;CI95=0.5,1;DP4=0,1,7,4;MQ=48;PV4=0.42,0.25,0.19,1 PL:DP:SP:GT:GQ 160,7,0:12:0:1/1:57 242chr10 70502288 . G A 99 . DP=76;AF1=0.5;CI95=0.5,0.5;DP4=15,24,17,15;MQ=48;PV4=0.24,4.1e-24,1.9e-13,0.2 PL:DP:SP:GT:GQ 235,0,255:71:6:0/1:99 243chr10 70525591 . G A 12.3 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.23,0.0022,1 PL:DP:SP:GT:GQ 42,0,62:4:0:0/1:45 244chr10 70641860 . T C 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,1,10;MQ=48 PL:DP:SP:GT:GQ 133,33,0:11:0:1/1:99 245chr10 70646193 . C T 16.1 . DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,13,5,0;MQ=49;PV4=0.00012,0.0016,1.1e-05,1 PL:DP:SP:GT:GQ 46,0,217:18:39:0/1:49 246chr10 70694171 . T A 14.2 . DP=8;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=44;PV4=1,0.42,0.096,1 PL:DP:SP:GT:GQ 44,0,29:5:0:0/1:32 247chr10 70725128 . A G 99 . DP=15;AF1=1;CI95=1,1;DP4=0,1,9,3;MQ=45;PV4=0.31,1,0.039,1 PL:DP:SP:GT:GQ 236,22,0:13:0:1/1:88 248chr10 70748716 . TG TGACAG 12.7 . INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50 PL:DP:SP:GT:GQ 50,3,0:1:0:1/1:41 249chr10 70928380 . A C 19.1 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=8,2,0,6;MQ=49;PV4=0.007,0.0015,0.00032,1 PL:DP:SP:GT:GQ 49,0,226:16:22:0/1:52 250chr10 70992664 . C T 78 . DP=28;AF1=1;CI95=1,1;DP4=1,0,0,23;MQ=49;PV4=0.042,1,0.31,1 PL:DP:SP:GT:GQ 111,56,0:24:0:1/1:99 251chr10 70992912 . A T 99 . DP=55;AF1=1;CI95=1,1;DP4=3,0,13,30;MQ=48;PV4=0.037,1,0.037,1 PL:DP:SP:GT:GQ 239,70,0:46:14:1/1:99 252chr10 70992949 . T A 93 . DP=35;AF1=1;CI95=1,1;DP4=0,1,0,29;MQ=48;PV4=1,0.13,0.2,1 PL:DP:SP:GT:GQ 126,61,0:30:0:1/1:99 253chr10 71016947 . C G 20.6 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50 PL:DP:SP:GT:GQ 53,12,0:4:0:1/1:72 254chr10 71018660 . T C 53 . DP=21;AF1=0.502;CI95=0.5,0.5;DP4=1,1,0,6;MQ=47;PV4=0.25,1,0.35,1 PL:DP:SP:GT:GQ 83,0,21:8:0:0/1:24 255chr10 71144702 . G A 99 . DP=24;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=48 PL:DP:SP:GT:GQ 140,33,0:11:0:1/1:99 256chr10 71392557 . C T 55.1 . DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49 PL:DP:SP:GT:GQ 88,21,0:7:0:1/1:84 257chr10 71969062 . G A 24 . DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48 PL:DP:SP:GT:GQ 56,9,0:3:0:1/1:63 258chr10 72195439 . T C 69.1 . DP=11;AF1=1;CI95=0.5,1;DP4=1,0,9,1;MQ=49;PV4=1,0.18,0.34,1 PL:DP:SP:GT:GQ 100,5,0:11:0:1/1:46 259chr10 72297567 . G A 45 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,2,5,0;MQ=48;PV4=0.048,0.17,0.031,1 PL:DP:SP:GT:GQ 75,0,40:7:13:0/1:43 260chr10 72357713 . C T 63 . DP=5;AF1=0.501;CI95=0.5,0.5;DP4=1,0,4,0;MQ=43;PV4=1,0.34,0.2,0.41 PL:DP:SP:GT:GQ 93,0,24:5:0:0/1:27 261chr10 72496375 . A G 99 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43 PL:DP:SP:GT:GQ 167,18,0:6:0:1/1:90 262chr10 72500863 . C G 29.6 . DP=33;AF1=0.5939;CI95=0.5,1;DP4=0,1,5,0;MQ=49;PV4=0.17,0.34,0.35,1 PL:DP:SP:GT:GQ 59,0,5:6:0:0/1:7 263chr10 72619205 . C T 99 . DP=45;AF1=1;CI95=0.5,1;DP4=1,1,6,9;MQ=49;PV4=1,0.37,0.14,1 PL:DP:SP:GT:GQ 147,7,0:17:0:1/1:57 264chr10 72633458 . C T 59 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,12;MQ=49;PV4=1,1.4e-09,0.053,1 PL:DP:SP:GT:GQ 89,0,184:20:0:0/1:92 265chr10 73104056 . A G 99 . DP=33;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=47 PL:DP:SP:GT:GQ 166,66,0:22:0:1/1:99 266chr10 73121913 . A G 99 . DP=37;AF1=1;CI95=1,1;DP4=1,0,16,16;MQ=42;PV4=1,1,0.055,1 PL:DP:SP:GT:GQ 255,79,0:33:0:1/1:99 267chr10 73520632 . A C 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=48 PL:DP:SP:GT:GQ 132,27,0:9:0:1/1:99 268chr10 73578882 . T C 99 . DP=41;AF1=1;CI95=1,1;DP4=0,0,1,34;MQ=48 PL:DP:SP:GT:GQ 175,105,0:35:0:1/1:99 269chr10 73579501 . AGAGG AG 10.8 . INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50 PL:DP:SP:GT:GQ 48,3,0:1:0:1/1:41 270chr10 73579979 . G A 99 . DP=35;AF1=0.5;CI95=0.5,0.5;DP4=16,0,16,0;MQ=47;PV4=1,1.3e-05,1.4e-12,0.049 PL:DP:SP:GT:GQ 190,0,233:32:0:0/1:99 271chr10 74813116 . A G 29 . DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,7,5,1;MQ=47;PV4=0.041,0.19,0.044,1 PL:DP:SP:GT:GQ 59,0,157:15:14:0/1:62 272chr10 75186107 . C T 18.1 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,2,0,4;MQ=48;PV4=0.076,0.3,0.12,1 PL:DP:SP:GT:GQ 48,0,99:10:11:0/1:51 273chr10 75187502 . G A 44 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,7,4,2;MQ=48;PV4=0.091,0.089,0.0045,1 PL:DP:SP:GT:GQ 74,0,144:14:10:0/1:77 274chr10 75476882 . A G 3.55 . DP=11;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 31,0,25:4:0:0/1:27 275chr10 75526651 . T C 37 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,6;MQ=48;PV4=0.4,0.17,0.46,0.43 PL:DP:SP:GT:GQ 67,0,76:10:0:0/1:69 276chr10 75574848 . G C 15.1 . DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.16,0.065,1 PL:DP:SP:GT:GQ 45,0,68:4:5:0/1:48 277chr10 75607168 . T C 11.4 . DP=25;AF1=0.508;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.2,0.21,1 PL:DP:SP:GT:GQ 41,0,15:4:0:0/1:18 278chr10 75607643 . C CT 59.4 . INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50 PL:DP:SP:GT:GQ 99,9,0:3:0:1/1:63 279chr10 75607696 . CAA CA 99 . INDEL;DP=15;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=50 PL:DP:SP:GT:GQ 154,42,0:14:0:1/1:99 280chr10 75673101 . T C 72.1 . DP=39;AF1=0.9966;CI95=0.5,1;DP4=0,1,6,2;MQ=49;PV4=0.33,0.23,0.26,1 PL:DP:SP:GT:GQ 101,1,0:9:0:1/1:23 281chr10 75842152 . G A 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=47 PL:DP:SP:GT:GQ 132,30,0:10:0:1/1:99 282chr10 75843100 . T A 67.1 . DP=19;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 100,21,0:7:0:1/1:84 283chr10 75863750 . C T 61 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=48;PV4=1,0.00017,0.015,0.46 PL:DP:SP:GT:GQ 91,0,143:12:0:0/1:94 284chr10 76729901 . T A 7 . DP=7;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.077,0.11,0.27 PL:DP:SP:GT:GQ 36,0,19:3:0:0/1:22 285chr10 76854564 . C T 99 . DP=26;AF1=1;CI95=1,1;DP4=0,1,13,6;MQ=48;PV4=0.35,0.19,0.27,1 PL:DP:SP:GT:GQ 205,29,0:20:0:1/1:99 286chr10 76855326 . A G 9.31 . DP=14;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48 PL:DP:SP:GT:GQ 40,6,0:2:0:1/1:49 287chr10 76855412 . G A 99 . DP=49;AF1=1;CI95=1,1;DP4=1,0,9,29;MQ=44;PV4=0.26,1,9.9e-05,1 PL:DP:SP:GT:GQ 255,91,0:39:0:1/1:99 288chr10 76857716 . A G 96 . DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=47 PL:DP:SP:GT:GQ 129,27,0:9:0:1/1:99 289chr10 77454739 . A G 51.3 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=49 PL:DP:SP:GT:GQ 84,15,0:5:0:1/1:75 290chr10 78649399 . C T 99 . DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,14;MQ=47;PV4=1,0.044,9.2e-09,1 PL:DP:SP:GT:GQ 181,0,227:28:0:0/1:99 291chr10 79541428 . C T 38.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49 PL:DP:SP:GT:GQ 71,12,0:4:0:1/1:72 292chr10 79552151 . T C 65 . DP=14;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49 PL:DP:SP:GT:GQ 98,27,0:9:0:1/1:99 293chr10 79553673 . T C 26.8 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42 PL:DP:SP:GT:GQ 58,6,0:2:0:1/1:49 294chr10 79584178 . G C 99 . DP=32;AF1=1;CI95=1,1;DP4=0,0,2,7;MQ=48 PL:DP:SP:GT:GQ 133,27,0:9:0:1/1:99 295chr10 79590685 . C T 38.1 . DP=18;AF1=0.5064;CI95=0.5,0.5;DP4=0,1,0,6;MQ=48;PV4=1,0.032,0.16,1 PL:DP:SP:GT:GQ 68,0,16:7:0:0/1:19 296chr10 79614189 . A G 24.8 . DP=30;AF1=0.6243;CI95=0.5,1;DP4=0,1,1,2;MQ=49;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 54,0,4:4:0:0/1:6 297chr10 79616642 . C T 37 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,0,6;MQ=49;PV4=0.0048,0.0084,0.068,0.076 PL:DP:SP:GT:GQ 67,0,102:10:23:0/1:70 298chr10 79628875 . A G 27 . DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48 PL:DP:SP:GT:GQ 59,9,0:3:0:1/1:63 299chr10 80364929 . G A 8.65 . DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43 PL:DP:SP:GT:GQ 38,3,0:1:0:1/1:41 300chr10 81053475 . G A 54 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,16,0,8;MQ=49;PV4=1,4.3e-08,8.9e-06,0.15 PL:DP:SP:GT:GQ 84,0,237:24:0:0/1:87 301chr10 81267889 . A C 13 . DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48 PL:DP:SP:GT:GQ 44,6,0:2:0:1/1:49 302chr10 81274706 . G A 50.1 . DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,0;MQ=41;PV4=1,1,0.07,1 PL:DP:SP:GT:GQ 80,0,15:4:0:0/1:18 303chr10 81274984 . A C 31.5 . DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 64,12,0:4:0:1/1:72 304chr10 81318820 . G A 30 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=47;PV4=1,1,0.13,1 PL:DP:SP:GT:GQ 60,0,89:10:0:0/1:63 305chr10 81701722 . T C 99 . DP=41;AF1=1;CI95=1,1;DP4=0,1,3,26;MQ=46;PV4=1,1,0.15,1 PL:DP:SP:GT:GQ 230,64,0:30:0:1/1:99 306chr10 81841870 . T C 28.5 . DP=19;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49 PL:DP:SP:GT:GQ 61,12,0:4:0:1/1:72 307chr10 82040052 . A G 90.2 . DP=28;AF1=0.7303;CI95=0.5,1;DP4=0,1,4,5;MQ=48;PV4=1,0.057,0.26,1 PL:DP:SP:GT:GQ 119,0,2:10:0:0/1:3 308chr10 82043576 . G A 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46 PL:DP:SP:GT:GQ 148,45,0:15:0:1/1:99 309chr10 82182296 . G A 18.5 . DP=30;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=49;PV4=1,0.38,0.26,1 PL:DP:SP:GT:GQ 47,0,1:6:0:1/1:5 310chr10 84042755 . C T 4.13 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44 PL:DP:SP:GT:GQ 32,3,0:1:0:1/1:41 311chr10 85974381 . A G 84 . DP=34;AF1=1;CI95=1,1;DP4=0,0,0,31;MQ=49 PL:DP:SP:GT:GQ 117,93,0:31:0:1/1:99 312chr10 85992511 . T C 99 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,7,5;MQ=48;PV4=0.15,6.4e-06,0.00057,1 PL:DP:SP:GT:GQ 171,0,240:23:8:0/1:99 313chr10 85993836 . A G 99 . DP=27;AF1=1;CI95=1,1;DP4=0,1,9,13;MQ=46;PV4=1,1,0.11,1 PL:DP:SP:GT:GQ 255,49,0:23:0:1/1:99 314chr10 85994142 . A G,C 50.5 . DP=25;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47 PL:DP:SP:GT:GQ 98,27,78,15,0,78:5:0:1/1:72 315chr10 86004873 . T C 75.1 . DP=24;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=49 PL:DP:SP:GT:GQ 108,21,0:7:0:1/1:84 316chr10 86012713 . C T 99 . DP=27;AF1=1;CI95=1,1;DP4=0,0,6,18;MQ=45 PL:DP:SP:GT:GQ 255,72,0:24:0:1/1:99 317chr10 86185654 . T G 57.1 . DP=30;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=49 PL:DP:SP:GT:GQ 90,21,0:7:0:1/1:84 318chr10 87482991 . C T 4.77 . DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.21,0.072,1 PL:DP:SP:GT:GQ 33,0,59:4:0:0/1:36 319chr10 88220866 . C T 31 . DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.007,0,1 PL:DP:SP:GT:GQ 61,0,80:4:0:0/1:64 320chr10 88233628 . C G 99 . DP=17;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=47 PL:DP:SP:GT:GQ 150,42,0:14:0:1/1:99 321chr10 88256943 . C T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=46 PL:DP:SP:GT:GQ 179,27,0:9:0:1/1:99 322chr10 88677115 . T G 25 . DP=22;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=49;PV4=1,0.44,0.053,1 PL:DP:SP:GT:GQ 55,0,22:8:0:0/1:25 323chr10 88761481 . T C 36 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,5;MQ=38;PV4=1,0.066,1,0.38 PL:DP:SP:GT:GQ 66,0,112:12:0:0/1:69 324chr10 88768253 . A G 99 . DP=54;AF1=1;CI95=1,1;DP4=1,0,28,18;MQ=21;PV4=1,1,0.0001,1 PL:DP:SP:GT:GQ 209,116,0:47:0:1/1:99 325chr10 88768657 . C T 99 . DP=43;AF1=1;CI95=1,1;DP4=1,1,17,10;MQ=43;PV4=1,0.18,1,1 PL:DP:SP:GT:GQ 255,49,0:29:0:1/1:99 326chr10 89469083 . CATATATATATATATATATA CATATATATATATATA 37.5 . INDEL;DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=50;PV4=1,1,1,0.39 PL:DP:SP:GT:GQ 75,0,56:4:0:0/1:59 327chr10 90356598 . A G 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,5,7;MQ=43 PL:DP:SP:GT:GQ 255,36,0:12:0:1/1:99 328chr10 90438327 . T G 6.2 . DP=41;AF1=0.4999;CI95=0.5,0.5;DP4=14,6,0,7;MQ=49;PV4=0.0019,0.00013,0.00028,1 PL:DP:SP:GT:GQ 35,0,255:27:27:0/1:38 329chr10 90545972 . T G 84.1 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=48 PL:DP:SP:GT:GQ 117,18,0:6:0:1/1:90 330chr10 90546007 . A G 39.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48 PL:DP:SP:GT:GQ 72,12,0:4:0:1/1:72 331chr10 90585819 . G A 99 . DP=23;AF1=1;CI95=1,1;DP4=0,1,13,5;MQ=49;PV4=0.32,0.039,0.31,1 PL:DP:SP:GT:GQ 156,28,0:19:0:1/1:99 332chr10 90767395 . G C 99 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43 PL:DP:SP:GT:GQ 167,18,0:6:0:1/1:90 333chr10 90771829 . T C 57.5 . DP=29;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,5;MQ=48;PV4=1,1,0.12,0.41 PL:DP:SP:GT:GQ 86,0,1:7:0:1/1:5 334chr10 91066460 . T A 95 . DP=38;AF1=1;CI95=1,1;DP4=0,0,5,4;MQ=49 PL:DP:SP:GT:GQ 128,27,0:9:0:1/1:99 335chr10 91099943 . C G 31 . DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47 PL:DP:SP:GT:GQ 63,9,0:3:0:1/1:63 336chr10 91137826 . T C 99 . DP=24;AF1=1;CI95=0.5,1;DP4=1,0,13,0;MQ=45;PV4=1,1,0.07,1 PL:DP:SP:GT:GQ 182,15,0:14:0:1/1:75 337chr10 91162182 . C T 99 . DP=21;AF1=1;CI95=1,1;DP4=0,0,1,16;MQ=49 PL:DP:SP:GT:GQ 147,51,0:17:0:1/1:99 338chr10 91178000 . C T 99 . DP=42;AF1=1;CI95=1,1;DP4=0,1,3,35;MQ=48;PV4=1,0.0097,0.11,1 PL:DP:SP:GT:GQ 185,83,0:39:0:1/1:99 339chr10 91352966 . G A 99 . DP=20;AF1=1;CI95=1,1;DP4=0,0,5,13;MQ=49 PL:DP:SP:GT:GQ 173,54,0:18:0:1/1:99 340chr10 91498127 . T C 99 . DP=28;AF1=1;CI95=1,1;DP4=0,0,2,20;MQ=47 PL:DP:SP:GT:GQ 195,66,0:22:0:1/1:99 341chr10 91522605 . G C 99 . DP=15;AF1=1;CI95=0.5,1;DP4=0,1,0,9;MQ=43;PV4=1,1,0.45,1 PL:DP:SP:GT:GQ 163,14,0:10:0:1/1:70 342chr10 91738755 . T C 71.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47 PL:DP:SP:GT:GQ 104,15,0:5:0:1/1:75 343chr10 93000211 . G A 99 . DP=15;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=45 PL:DP:SP:GT:GQ 161,39,0:13:0:1/1:99 344chr10 93257936 . T G 4.13 . DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.12,1,0.46 PL:DP:SP:GT:GQ 32,0,40:6:0:0/1:34 345chr10 93601285 . G C 38 . DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,3;MQ=45;PV4=1,0.09,0.19,1 PL:DP:SP:GT:GQ 68,0,38:4:0:0/1:41 346chr10 93604827 . A G 8.44 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49 PL:DP:SP:GT:GQ 39,6,0:2:0:1/1:49 347chr10 93611176 . ATATG ATATGTATG 99 . INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50 PL:DP:SP:GT:GQ 202,21,0:7:0:1/1:84 348chr10 93702377 . T G 72 . DP=18;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48 PL:DP:SP:GT:GQ 105,24,0:8:0:1/1:96 349chr10 93778645 . T A 6.98 . DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=12,1,0,6;MQ=49;PV4=0.00026,0.00012,0.0024,1 PL:DP:SP:GT:GQ 36,0,241:19:36:0/1:39 350chr10 93841227 . A G 99 . DP=28;AF1=1;CI95=1,1;DP4=1,0,8,13;MQ=46;PV4=0.41,1,0.053,1 PL:DP:SP:GT:GQ 255,42,0:22:0:1/1:99 351chr10 94594565 . G A 99 . DP=43;AF1=1;CI95=1,1;DP4=0,0,5,27;MQ=49 PL:DP:SP:GT:GQ 206,96,0:32:0:1/1:99 352chr10 94688167 . C G 20 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,5;MQ=48;PV4=0.18,0.16,0.11,0.17 PL:DP:SP:GT:GQ 50,0,128:11:7:0/1:53 353chr10 94695617 . C T 91 . DP=13;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48 PL:DP:SP:GT:GQ 124,27,0:9:0:1/1:99 354chr10 94757270 . C T 64 . DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,0,5,0;MQ=46;PV4=1,0.17,0.098,1 PL:DP:SP:GT:GQ 94,0,50:7:0:0/1:53 355chr10 94816807 . GAAA GAAAA 99 . INDEL;DP=22;AF1=1;CI95=1,1;DP4=0,1,0,15;MQ=50;PV4=1,1,1,1 PL:DP:SP:GT:GQ 159,34,0:16:0:1/1:99 356chr10 95043763 . G A 97 . DP=18;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=23 PL:DP:SP:GT:GQ 130,51,0:17:0:1/1:99 357chr10 95072906 . T C 34.5 . DP=49;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=49 PL:DP:SP:GT:GQ 67,12,0:4:0:1/1:72 358chr10 95073046 . A G 66.3 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45 PL:DP:SP:GT:GQ 99,15,0:5:0:1/1:75 359chr10 95089312 . T C 99 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45 PL:DP:SP:GT:GQ 133,15,0:5:0:1/1:75 360chr10 95132905 . C T 18 . DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49 PL:DP:SP:GT:GQ 50,9,0:3:0:1/1:63 361chr10 95162113 . G C 69 . DP=27;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=49 PL:DP:SP:GT:GQ 102,69,0:23:0:1/1:99 362chr10 95164040 . A G 66.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46 PL:DP:SP:GT:GQ 99,15,0:5:0:1/1:75 363chr10 95241999 . A C 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,0,26;MQ=46 PL:DP:SP:GT:GQ 164,78,0:26:0:1/1:99 364chr10 95262981 . A G 99 . DP=38;AF1=1;CI95=1,1;DP4=0,0,22,9;MQ=50 PL:DP:SP:GT:GQ 161,93,0:31:0:1/1:99 365chr10 95400773 . T G 47 . DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,7;MQ=48;PV4=0.22,0.047,0.064,1 PL:DP:SP:GT:GQ 77,0,43:9:0:0/1:46 366chr10 95459817 . C T 99 . DP=14;AF1=1;CI95=1,1;DP4=0,0,10,2;MQ=49 PL:DP:SP:GT:GQ 140,36,0:12:0:1/1:99 367chr10 95557593 . T G 32.5 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 65,12,0:4:0:1/1:72 368chr10 95641536 . A C 34 . DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47 PL:DP:SP:GT:GQ 66,9,0:3:0:1/1:63 369chr10 96044579 . A C 8.64 . DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=49;PV4=0.17,0.3,0.012,1 PL:DP:SP:GT:GQ 38,0,122:9:8:0/1:41 370chr10 96100314 . A C 8.65 . DP=12;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.23,0.27,1 PL:DP:SP:GT:GQ 38,0,26:3:0:0/1:29 371chr10 96271298 . A C 65 . DP=25;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49 PL:DP:SP:GT:GQ 98,27,0:9:0:1/1:99 372chr10 96313960 . A C 22.5 . DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49 PL:DP:SP:GT:GQ 55,12,0:4:0:1/1:72 373chr10 96827178 . T C 90 . DP=23;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48 PL:DP:SP:GT:GQ 123,39,0:13:0:1/1:99 374chr10 97096639 . A T 37 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,13,8,0;MQ=48;PV4=2.8e-05,0.00047,0.0066,1 PL:DP:SP:GT:GQ 67,0,237:22:46:0/1:70 375chr10 97141523 . G A 99 . DP=36;AF1=1;CI95=1,1;DP4=0,0,6,26;MQ=49 PL:DP:SP:GT:GQ 235,96,0:32:0:1/1:99 376chr10 97440328 . G A 19.1 . DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,3;MQ=48;PV4=1,0.4,0.0097,1 PL:DP:SP:GT:GQ 49,0,61:6:0:0/1:52 377chr10 97447373 . A T 87 . DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,9,1,6;MQ=48;PV4=1,0.0014,0.00063,0.24 PL:DP:SP:GT:GQ 117,0,224:17:0:0/1:99 378chr10 97605057 . C G 99 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=15,1,14,0;MQ=47;PV4=1,9.9e-10,0,1 PL:DP:SP:GT:GQ 188,0,255:30:0:0/1:99 379chr10 97816749 . C G 39 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,2,0,7;MQ=49;PV4=0.0032,2.5e-05,0.00085,1 PL:DP:SP:GT:GQ 69,0,243:16:25:0/1:72 380chr10 98082385 . A G 27 . DP=9;AF1=0.5032;CI95=0.5,0.5;DP4=1,0,4,0;MQ=48;PV4=1,0.0099,0.063,0.38 PL:DP:SP:GT:GQ 57,0,19:5:0:0/1:22 381chr10 98084231 . A G 34.5 . DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48 PL:DP:SP:GT:GQ 67,12,0:4:0:1/1:72 382chr10 98092426 . G A 35 . DP=21;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,4;MQ=45;PV4=1,1,0.033,1 PL:DP:SP:GT:GQ 65,0,31:6:0:0/1:34 383chr10 98092427 . G A 39 . DP=22;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,7;MQ=45;PV4=1,0.32,1,0.14 PL:DP:SP:GT:GQ 69,0,29:10:0:0/1:32 384chr10 98144312 . G A 99 . DP=42;AF1=1;CI95=1,1;DP4=0,0,36,0;MQ=49 PL:DP:SP:GT:GQ 150,108,0:36:0:1/1:99 385chr10 98240035 . A T 99 . DP=12;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=44 PL:DP:SP:GT:GQ 211,36,0:12:0:1/1:99 386chr10 98281981 . A C 32.1 . DP=14;AF1=0.5129;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.044,1 PL:DP:SP:GT:GQ 62,0,13:7:0:0/1:16 387chr10 98380115 . G C 8.64 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=4,4,4,0;MQ=48;PV4=0.21,0.11,0.11,0.38 PL:DP:SP:GT:GQ 38,0,174:12:7:0/1:41 388chr10 98380277 . C T 76.1 . DP=30;AF1=0.505;CI95=0.5,0.5;DP4=1,0,3,6;MQ=49;PV4=0.4,0.00077,0.27,1 PL:DP:SP:GT:GQ 106,0,17:10:0:0/1:20 389chr10 98380363 . A G 73 . DP=8;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48 PL:DP:SP:GT:GQ 106,24,0:8:0:1/1:96 390chr10 98410947 . A C 49 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,0,7,0;MQ=46;PV4=1,0.32,0.072,1 PL:DP:SP:GT:GQ 79,0,38:10:0:0/1:41 391chr10 99019177 . A G 99 . DP=38;AF1=1;CI95=1,1;DP4=0,1,17,11;MQ=47;PV4=0.41,0.24,0.18,1 PL:DP:SP:GT:GQ 255,57,0:29:0:1/1:99 392chr10 99422648 . A G 38 . DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,0;MQ=49;PV4=1,3.6e-05,0.22,1 PL:DP:SP:GT:GQ 68,0,178:17:0:0/1:71 393chr10 99682981 . T C 59 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=11,5,11,0;MQ=49;PV4=0.06,1.2e-06,0.0071,1 PL:DP:SP:GT:GQ 89,0,255:27:12:0/1:92 394chr10 99969568 . A G 99 . DP=64;AF1=1;CI95=1,1;DP4=0,1,28,22;MQ=50;PV4=0.45,0.0011,0.41,1 PL:DP:SP:GT:GQ 163,122,0:51:0:1/1:99 395chr10 99991408 . A G 99 . DP=43;AF1=1;CI95=1,1;DP4=1,1,11,25;MQ=46;PV4=0.54,1,0.052,1 PL:DP:SP:GT:GQ 255,66,0:38:3:1/1:99 396chr10 100144782 . C T 77 . DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,5;MQ=48;PV4=1,5.7e-07,0.051,1 PL:DP:SP:GT:GQ 107,0,146:11:0:0/1:99 397chr10 100146895 . T C 37 . DP=10;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,0.0012,0.0087,1 PL:DP:SP:GT:GQ 67,0,150:9:0:0/1:70 398chr10 100147097 . G A 24 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,5;MQ=50;PV4=1,8.6e-09,0.095,1 PL:DP:SP:GT:GQ 54,0,210:14:0:0/1:57 399chr10 100148176 . A G 99 . DP=36;AF1=0.5;CI95=0.5,0.5;DP4=3,10,3,14;MQ=49;PV4=1,3.3e-08,0.007,1 PL:DP:SP:GT:GQ 149,0,255:30:0:0/1:99 400chr10 100155110 . C A 20 . DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,5;MQ=48;PV4=0.45,0.11,1,1 PL:DP:SP:GT:GQ 50,0,136:11:3:0/1:53 401chr10 100167396 . G A 99 . DP=25;AF1=1;CI95=1,1;DP4=0,0,6,14;MQ=48 PL:DP:SP:GT:GQ 225,60,0:20:0:1/1:99 402chr10 100183774 . A G 60.3 . DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47 PL:DP:SP:GT:GQ 93,15,0:5:0:1/1:75 403chr10 100219314 . G A 64 . DP=48;AF1=0.5;CI95=0.5,0.5;DP4=23,11,11,1;MQ=49;PV4=0.14,1.1e-15,9.2e-14,1 PL:DP:SP:GT:GQ 94,0,255:46:9:0/1:97 404chr10 101466569 . C G 11.3 . DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42 PL:DP:SP:GT:GQ 41,3,0:1:0:1/1:41 405chr10 101544447 . A T 99 . DP=61;AF1=1;CI95=1,1;DP4=0,0,6,7;MQ=48 PL:DP:SP:GT:GQ 176,39,0:13:0:1/1:99 406chr10 101591944 . T C 98 . DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48 PL:DP:SP:GT:GQ 131,36,0:12:0:1/1:99 407chr10 101596043 . A C 37 . DP=44;AF1=0.5;CI95=0.5,0.5;DP4=6,9,0,11;MQ=49;PV4=0.024,0.0029,0.0014,1 PL:DP:SP:GT:GQ 67,0,255:26:16:0/1:70 408chr10 101639905 . T A 60 . DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,11;MQ=48;PV4=1,0.19,0.12,1 PL:DP:SP:GT:GQ 90,0,75:17:0:0/1:78 409chr10 101645498 . T C 99 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,4,4,1;MQ=48;PV4=0.58,0.48,0,1 PL:DP:SP:GT:GQ 138,0,255:14:2:0/1:99 410chr10 101654696 . T C 99 . DP=27;AF1=0.5;CI95=0.5,0.5;DP4=8,3,13,1;MQ=48;PV4=0.29,1.4e-06,4.8e-09,1 PL:DP:SP:GT:GQ 142,0,255:25:5:0/1:99 411chr10 101874506 . T C 68.3 . DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47 PL:DP:SP:GT:GQ 101,15,0:5:0:1/1:75 412chr10 101995473 . C G 5.46 . DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,1,0.12,1 PL:DP:SP:GT:GQ 34,0,60:5:0:0/1:37 413chr10 101996787 . C G 78 . DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,9;MQ=47;PV4=1,0.44,0.014,1 PL:DP:SP:GT:GQ 108,0,52:13:0:0/1:55 414chr10 102016044 . C T 49 . DP=15;AF1=0.5;CI95=0.5,0.5;DP4=3,4,4,2;MQ=48;PV4=0.59,0.0088,0.17,1 PL:DP:SP:GT:GQ 79,0,196:13:2:0/1:82 415chr10 102114201 . G A 22 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,3,6,0;MQ=48;PV4=0.061,0.016,0.0027,0.1 PL:DP:SP:GT:GQ 52,0,144:11:12:0/1:55 416chr10 102267312 . C G 43 . DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,6,0,6;MQ=48;PV4=0.23,0.24,0.0085,1 PL:DP:SP:GT:GQ 73,0,167:15:6:0/1:76 417chr10 102780312 . G T 76 . DP=10;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49 PL:DP:SP:GT:GQ 109,27,0:9:0:1/1:99 418chr10 102796952 . C A 29 . DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,4,0,5;MQ=49;PV4=0.086,0.073,0.0025,1 PL:DP:SP:GT:GQ 59,0,203:14:11:0/1:62 419chr10 103221870 . CAGGAGGA CAGGA 99 . INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50 PL:DP:SP:GT:GQ 252,39,0:13:0:1/1:99 420chr10 103294568 . T G 31 . DP=39;AF1=0.5;CI95=0.5,0.5;DP4=2,16,1,6;MQ=49;PV4=1,9.7e-05,3.2e-05,0.12 PL:DP:SP:GT:GQ 61,0,255:25:0:0/1:64 421chr10 103340168 . C G 24 . DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=47;PV4=1,1,0.19,0.14 PL:DP:SP:GT:GQ 54,0,83:7:0:0/1:57 422chr10 103432592 . A C 37.2 . DP=16;AF1=0.5207;CI95=0.5,1;DP4=1,0,5,0;MQ=48;PV4=1,0.016,0.031,0.11 PL:DP:SP:GT:GQ 67,0,11:6:0:0/1:14 423chr10 103541948 . C T 20 . DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49 PL:DP:SP:GT:GQ 52,9,0:3:0:1/1:63 424chr10 104136469 . T C 88.5 . DP=49;AF1=1;CI95=0.5,1;DP4=0,1,2,6;MQ=48;PV4=1,1,0.21,1 PL:DP:SP:GT:GQ 121,12,0:9:0:1/1:72 425chr10 104233278 . G A 5.46 . DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.035,0.44,0.48 PL:DP:SP:GT:GQ 34,0,45:6:0:0/1:37 426chr10 104375258 . G A 55.5 . DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45 PL:DP:SP:GT:GQ 88,12,0:4:0:1/1:72 427chr10 104459079 . TAA T 99 . INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=50 PL:DP:SP:GT:GQ 240,30,0:10:0:1/1:99 428chr10 104572276 . A G 99 . DP=31;AF1=1;CI95=1,1;DP4=0,0,25,1;MQ=48 PL:DP:SP:GT:GQ 159,78,0:26:0:1/1:99 429chr10 105158281 . T G 60 . DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,9;MQ=48;PV4=1,0.29,9.5e-05,1 PL:DP:SP:GT:GQ 90,0,89:15:0:0/1:89 430chr10 105176179 . T C 68.1 . DP=30;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48 PL:DP:SP:GT:GQ 101,21,0:7:0:1/1:84 431chr10 105362209 . T C 82.4 . DP=80;AF1=1;CI95=0.5,1;DP4=1,0,7,5;MQ=50;PV4=1,0.037,0.32,1 PL:DP:SP:GT:GQ 115,13,0:13:0:1/1:65 432chr10 105363289 . T C 99 . DP=24;AF1=0.5;CI95=0…
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