PageRenderTime 130ms CodeModel.GetById 20ms RepoModel.GetById 1ms app.codeStats 0ms

/test-data/5.maf

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 1513 lines | 1330 code | 183 blank | 0 comment | 0 complexity | c62b6d70c9496c0428db14d7d017f60d MD5 | raw file

Large files files are truncated, but you can click here to view the full file

  1. ##maf version=1
  2. a score=64549.0
  3. s hg17.chr1 147962192 9 + 245522847 TCATTTAAT
  4. s panTro1.chr1 129698808 9 + 229575298 TCATTTAAT
  5. s mm5.chr3 65458475 7 - 160575607 --ATTTGAT
  6. s rn3.chr2 68236843 7 - 258222147 --ATTTGAT
  7. s canFam1.chr17 62929731 9 + 66886099 TTATTTGAT
  8. a score=37247.0
  9. s hg17.chr1 147962201 43 + 245522847 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
  10. s panTro1.chr1 129698817 43 + 229575298 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
  11. s mm5.chr3 65458482 43 - 160575607 GACAATCTTCTGACGCAAGGCTCGAGGCCCAGAGCCAGGTAGT
  12. s rn3.chr2 68236850 43 - 258222147 GACAATCTTCTGACGCAAGGCTCGGGGCCCAGCGCCAGGGAGT
  13. s canFam1.chr17 62929740 43 + 66886099 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAACCAGGGAGG
  14. s danRer1.chr10 19400803 43 + 25436222 GGCGCTCTGCTTGAGCACAGCTTTGGGTCGTGCGCTCTTCAAA
  15. a score=1000.0
  16. s hg17.chr1 147962244 1 + 245522847 G
  17. s panTro1.chr1 129698860 1 + 229575298 G
  18. s mm5.chr3 65458525 1 - 160575607 G
  19. s rn3.chr2 68236893 1 - 258222147 G
  20. s canFam1.chr17 62929783 1 + 66886099 G
  21. a score=0.0
  22. s hg17.chr1 147962244 3 + 245522847 GGC
  23. a score=3000.0
  24. s hg17.chr1 147962245 2 + 245522847 GC
  25. s panTro1.chr1 129698861 2 + 229575298 GC
  26. s mm5.chr3 65458526 2 - 160575607 GC
  27. s rn3.chr2 68236894 2 - 258222147 GC
  28. s canFam1.chr17 62929784 2 + 66886099 GC
  29. s fr1.chrUn 290886762 2 + 349519338 GC
  30. a score=18092.0
  31. s hg17.chr1 147962247 26 + 245522847 TCAGGAGGTGGCGGGCCGGGGCC-----CAG
  32. s panTro1.chr1 129698863 26 + 229575298 TCAGGAGGTGGCGGGCCAGGGCC-----CAG
  33. s mm5.chr3 65458528 26 - 160575607 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
  34. s rn3.chr2 68236896 26 - 258222147 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
  35. s canFam1.chr17 62929786 26 + 66886099 TCGGGAGGTGGTGGGCCAGGGCC-----CAG
  36. s fr1.chrUn 290886764 26 + 349519338 TGATGAGGAATCGAGTCCTGTGG-----CAG
  37. s danRer1.chr10 19400846 31 + 25436222 TTAGCAGGTGAATCGCTAGCGTCGGTGTTAG
  38. a score=219213.0
  39. s hg17.chr1 147962273 178 + 245522847 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAGACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
  40. s panTro1.chr1 129698889 178 + 229575298 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAAACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
  41. s mm5.chr3 65458554 178 - 160575607 CGCCGAGGCGGTGGGTGGAAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGCACCGGGACCTTCGGG---GGTCGCCCCTGG
  42. s rn3.chr2 68236922 178 - 258222147 CGCTGAGGCAGTGGGTGGTAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGAACAGGGACCTTTGGT---GGTCGCCCTTGG
  43. s canFam1.chr17 62929812 178 + 66886099 GGCTGAGGCAGTGGGCGGCAGTCCGTGGGCAGTGATGTACTTCTTGTAGGCCTCACGGATGATCTTGAAGGCTCGAGCAGTGGCGTAGGGGATGTCTGTGACAGGGTCCCGGTACAGGGCTGGGCGATGGGTCACGGGGCAGACCTCCCGAACAGGGACCTTTGGG---GGCCGGCCTTGG
  44. s fr1.chrUn 290886790 179 + 349519338 CTCCAGG--AGTGTTTGGGAAGCCGTGTGCAGCCACGTATTTACGGTAAGCTTCTCGGATGATGCGGAAGGCTCGTGCGTTAGCATAAGGTATGTCTGTGACCGGATCTCTGTACAGTGCGATCTTATGCGTGACGGGACAAATCTCCTGGACGGGCAGCTGAGGGCTCGGCTGCCCCTTG
  45. s danRer1.chrUn 128306408 178 - 367113659 GGATGGGCCAGTGCAGGGCAGGCCATGAGCAGCCACATACTTCTTATAGGCCTCCCGAATTATCCTGAAGGCCTGTACATTAGCGTAAGGAATGTCAGTGATGGGGTCCCGGTAGAGCGCAGGCTTATGGGTAACAGGACAGACCTCCTGGACAGGTACTCGAGGA---GCAGGCGACTGG
  46. a score=84843.0
  47. s hg17.chr1 147962451 56 + 245522847 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
  48. s panTro1.chr1 129699067 56 + 229575298 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
  49. s mm5.chr3 65458732 56 - 160575607 GGGAACCACTCTTCAAACGTTGCATCATCACTGAACGTGATGAAGGTGCGAGAGCA
  50. s rn3.chr2 68237100 56 - 258222147 GGGAACCATTCTTCAAACGTGGCATCATCACTGAATGTGATGAAGGTACGTGAGCA
  51. s canFam1.chr17 62929990 56 + 66886099 GGAAACCATTCCTCAAATGTTGCATCATCACTAAAAGTGATGAAAGTACGCGAGCA
  52. s galGal2.chrUn 96971568 56 + 165033910 GGGGAAGAACGTTCGAAGGTTTCGTCGTCGCTGAAGGCATTGAAGGTGCGCGAGCA
  53. s fr1.chrUn 290886972 56 + 349519338 GAAAAGGCCACCTTAAAAGCTTCGTCGTCGCTGAACGTGATGTAAGTACGGGAGCA
  54. s danRer1.chrUn 128306586 56 - 367113659 GGAAAGACACGCTGGAAGGACTCATCATCACTGAATGTGATGTAGGTGCGAGAGCA
  55. a score=25539.0
  56. s hg17.chr1 147962507 63 + 245522847 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGACACCGAGGGAG-C
  57. s panTro1.chr1 129699123 63 + 229575298 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGAAGGGGAGGGAG-C
  58. s mm5.chr3 65458788 75 - 160575607 GTG-----AGCAGGAGGGGTGGCAGCGGCAGCTCCAGTC------CCGGTCCCAGCATG--TGGAGCCAGTGCAGAGGCTGTAGGAG-C
  59. s rn3.chr2 68237156 63 - 258222147 GTG-----AGGAGGAGGGACGG------------CAGGT------CCAGTGCCAGCATG--TGCAGTCAGTGCAGAGGACGTAGGAG-C
  60. s canFam1.chr17 62930046 63 + 66886099 GCG-----AGGTGGAGGGACAA------------CGGGT------CCAGTGCCGGCATG--GGGAGTCAGTGCAGAAGCTGTGGGAG-T
  61. s galGal2.chrUn 96971633 66 + 165033910 GCA-----GGCCGGGGCTGCGG------------CCGGG------GCGGCGTCTGCCTGCTGCGGGTCCTGGTCCAACCTGCAAGAGCC
  62. s danRer1.chrUn 128306646 74 - 367113659 GTGTTTACAGCAGCTGTGTTTG------------TGAATGGGACACCGGGTGCTGCGGA--AAGCGTTGATTCGGACTGGGAAAGAG-C
  63. a score=14242.0
  64. s hg17.chr1 147962570 10 + 245522847 AGGATCAAGT
  65. s panTro1.chr1 129699186 10 + 229575298 AGGATCAAGT
  66. s mm5.chr3 65458863 10 - 160575607 AGGATCAAGG
  67. s rn3.chr2 68237219 10 - 258222147 AGGATCAAGT
  68. s canFam1.chr17 62930109 10 + 66886099 AGGATCCAGC
  69. s galGal2.chrUn 96971699 10 + 165033910 GGGGTCAGCT
  70. a score=550634.0
  71. s hg17.chr1 147984545 85 + 245522847 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
  72. s panTro1.chr1 129723125 85 + 229575298 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTCGTCCTCAG
  73. s mm5.chr3 65474800 76 - 160575607 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCCGGGTTTTCATCCCTTGATGCCGGGGCCCCTGCTGGTA------CCGCAG
  74. s rn3.chr2 68255714 76 - 258222147 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCGGGGTTTTCACCCCTTGATTCCGGGGTCCCTGCCGGTA------CCGCAG
  75. s canFam1.chr17 62947719 82 + 66886099 ATGGCGTCGGCCTCCTCTGGGCCGTCG---GCGGCTGGGGTTTCATCCTTTGATCCCGGGGTCCCTTCCTGTGCTTCGGCTTCAG
  76. a score=365854.0
  77. s hg17.chr1 148078400 182 + 245522847 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
  78. s panTro1.chr1 129830209 182 + 229575298 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
  79. s mm5.chr3 65575311 182 - 160575607 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
  80. s rn3.chr2 68356506 182 - 258222147 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
  81. s canFam1.chr17 63050241 182 + 66886099 TCACATGATGCCATTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATGCTGCCATCTACCATCTGCTCCACCAGCAGCTGGAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCGCTCTTTGAGGTTGCGGATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
  82. s galGal2.chrUn 96994100 182 + 165033910 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCGTACAGTTTGGTGGTGATGGAGCGCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCCGTCATGTTCAT-GTGGAAGCGCTCCTTCAGGTTGCGGATGGTGCTGGAGCCGTGGAAGCAGGGGAGCTGCGA-GC
  83. s fr1.chrUn 196934251 182 - 349519338 TCACATGATTCCATTTGTCAGGTACTGGAAGCCGTCGTAGAGTTTGGTCGTCAGCGACCTCATCGAGCCCTCGACCAGCTGATCGATCAGCAGCTGGAGCTGCTCCTCTGTCAGACTCAT-GTGGAAACGTTCCTTCAAACCCCGCATGGTGCTCGACCCGTGGAAACACGGCAGCTGGGA-CC
  84. s danRer1.chrNA 19436521 184 - 390413307 TCACATGATACCGTTGGTCAGATACTGGAAGCCGTCGTACAGTTTGGTAGTGATGGAGCGCATGGAGCCGTCCACCATCTGCTCCACCAGCACCTGCAGGTGCTCCTCCGATAAGTACATGGGGGAATAACTCCTTCAGGTTGCGGATAGTGCTGGAGCCATGGAAGCGAGGGAGCTGTGACAC
  85. a score=172494.0
  86. s hg17.chr1 148185136 140 + 245522847 ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
  87. s panTro1.chr1 129935611 140 + 229575298 ATGGAGGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGTGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
  88. s mm5.chr3 65694347 140 - 160575607 ATGGAAGCGTTTTGGGAGTCACGGGCTGGCCACTGGGCCGGGGGTCCGGCTCCAGGGCAGTTTTACCGCATCCCGGCCACCCCCAGCGGCCTCATGGACCCGGCGTCGGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
  89. s rn3.chr2 68486927 140 - 258222147 ATGGAAGCGTTTTGGGAGTCACGGACTGGCCACTGGGCCGGGGGTCCGGCTCCGGGGCAGTTTTACCGCGTCCCGTCCACCCCCAGCTGCCTCATGGATCCGATGTCTGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
  90. s canFam1.chr17 63150913 140 + 66886099 ATGGAAGCCTTTCTGGAGTCGCGGTCCAGAGTTTGGGCCGGTGGTCCCGCCCCGGGGCAGTTTTACCACATCCCGCCTAGTTCCGTCGCCTCCGTGGAGCCGGCGTTTTCTCCTTACGGGGGTCCGGTTACGCGCACGCA
  91. a score=69091.0
  92. s hg17.chr10 55251623 116 + 135413628 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAACTC--------CC------CTTGTTTTGTTCAGATGTGA----TTTCCATATTTGTTA------CTTCTGAAG-GGCACA----
  93. s panTro1.chr8 56162651 116 + 138322177 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAATTC--------TC------CTTGTTTTGTGCAAATGTGA----TTTCCATATTTGTTA------CGTCCGAAG-GGCACA----
  94. s mm5.chr10 56176594 116 - 130633972 TTACAAAGATGTTGATTGACTGTGAGGTTGCACGTCAATTCCCTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCATGTGTGA----TTTTCATGCCTGTTT------TCTCTGCAG-GGCAAA----
  95. s rn3.chr20 14526840 116 + 55296979 TTACAAGGACGTTGACTGACTGTGAGTTTGCACGTCAATCCCTTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCACATGTGA----TTTTCATGTTTGTTT------TCTCTGCAG-GACAAA----
  96. s canFam1.chr26 4431080 116 - 41009621 TTACAGTGAAGTAGATTGACTGTGAGATTGGTTCTCCGTTTCCTCGGCAAAACTGTGCAAATTC--------CC------CTGGGGTTGTTGAGACGTCA----CGTCCACATTTTCTC------TCTCTGGAG-GGCAAC----
  97. s galGal2.chr6 27913521 123 - 33893787 TTACAGTGCTGTCGACTGAGATGGAAAGCGTTTCTCAAGCTCCTCCACAACACAGCTCAAGTTG--------CCGTTCTGCTGGTTGTGCTCAGCTGCAG----CCTCGGGAGTTGGCA------GCTCTGGCGTTGCAAC----
  98. s danRer1.chr12 3415306 139 + 24175710 TCACAGAACAGTGGACTGAGATGGAAAGCGTTTCTCCAGCTCCTCCACTACTGAGTTCATGCTTGGATTGGGCT------CTGATGGTGGTCCTTCTTGAGCAGGCTCCGCCTCTGTTACACCAGCCTCTGGTTCGACAGACACT
  99. a score=137977.0
  100. s hg17.chr10 55251739 126 + 135413628 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAG-CTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACGTGTCTGAGGATGCCTTTTGGTTCTCTCT
  101. s panTro1.chr8 56162767 127 + 138322177 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAGACTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACATGTCTGAGGATGCCTTTTGGTTCTCTCT
  102. s mm5.chr10 56176710 126 - 130633972 ACGTGTGTAGTTTTGAGGGATCTGCAGGTGGG---CAGTTTTTTTCTATGTGACTGTACATGTTAG-ACACTGATTTCTCGAGCTCTGCCAAGTTTTTCACATGTCTGAGGATCCCTTTTGGATGTCTGT
  103. s rn3.chr20 14526956 126 + 55296979 AGGGGTGGAGTTTTGAGAGCTCTGTGGGTGGA---CAGTTTTTCTCGATGTGACTGTACATGTTAG-ACACCGATTTCTCGAGCTCTGCCAGGTTTTTCACGTGCCTGAGGATCCCTTTGGGATGTCTGT
  104. s canFam1.chr26 4431196 126 - 41009621 TTGTCTCTAGTTTCCAGCTGTGTGTTGCTGGA---AAGTTTTTTTCTATTTGACTGTACATGTTAG-CAACTGACTTTTCAAGGTCCGCTAAGTTTTTTATATGCTTGAGGATGCCCTTTGGTTGTTTCT
  105. s galGal2.chr6 27913644 128 - 33893787 TGGTTTG-AGCTTAGAGATGTGCTTGGGCAGAACGTGGTTTTTGTCTATTTGGCTGTACATATTGG-CCACGGACTTTTCAATCGCTGCTAAATTCTGAATGTTTTTAAGAATACCTTTCAGCTCCCTAC
  106. s fr1.chrUn 9089644 117 + 349519338 TAGGATGAAGCTTGGGCACCTT---------G---TAGTTTTTGTCTACTTGGCTGTACATGTTGG-CAATGGACCTCTCTATGTCAGCGAGATTCTGGATGTTTTTCAGGATCCCTTTGAGCTCCTTTT
  107. s danRer1.chr12 3415445 124 + 24175710 -----TGCGGTTTAGGGTTGATCACTAGTGGGCGCTGCTTTTTATCTATTTGACTGTACATATTGG-CAACAGATTTCTCGATGTCTGCTATGTTCTGGAGGTTCTTAAGGATCCCCTTGAGTTCCCTCT
  108. a score=13160.0
  109. s hg17.chr10 55251865 17 + 135413628 GAGGGTCTGTTTTACAC
  110. s panTro1.chr8 56162894 17 + 138322177 GAGGGTCTGTTTTACAC
  111. s mm5.chr10 56176836 17 - 130633972 GGGGTTCTGCCCCCCAC
  112. s rn3.chr20 14527082 17 + 55296979 GGGGTTCCGCCCCACAC
  113. s canFam1.chr26 4431322 17 - 41009621 GGGGGTCTGTGTCACAC
  114. s galGal2.chr6 27913772 17 - 33893787 GGGGAGGTGGCTCTGGC
  115. s fr1.chrUn 137770001 14 + 349519338 GAGGA---GTTTCGGGC
  116. s danRer1.chr12 3415572 17 + 24175710 GAGGCTCTGGCTCAGAC
  117. a score=14118.0
  118. s hg17.chr10 55251882 71 + 135413628 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCAAGTTGGTCGT-GCATTT
  119. s panTro1.chr8 56162911 71 + 138322177 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCATGTTGGTCGT-GCATTC
  120. s mm5.chr10 56176853 71 - 130633972 TGCGGGTTGGATGCTGGTGGCTGTGTCGTA---GACGTGGTTTCTCTGGCGTGTGTGGCACTGGCAGT-GCATTT
  121. s rn3.chr20 14527099 71 + 55296979 GGTGGGTTGGATGCTGGTGGCTGTGTCGTA---GACATAGTTTCTCTGGCGTGTGTGACACTGGCAGT-GCATTT
  122. s canFam1.chr26 4431339 74 - 41009621 ACGGTCGTGGATGCTGGTAGCTGTGCGACAGAGGGCTCCACGTCCTCGGCAGGTGTCACACTGACAGT-GTGCTT
  123. s galGal2.chr6 27913789 44 - 33893787 ACTGCGGCCGGTGGTGGTA------------------------------CAGCTGGCTGTTTGGCAGG-GGATTT
  124. s fr1.chrUn 137770015 54 + 349519338 TCTGTAGTGGGAGCAGGGG--------------------GTGGTGTTGGCCGGAGAGACACTGGCCGCAGCGTT-
  125. a score=9016.0
  126. s hg17.chr10 55251953 19 + 135413628 AACACCTGTTATACAGACA
  127. s panTro1.chr8 56162982 19 + 138322177 AACACCTGTTATACAGACA
  128. s mm5.chr10 56176924 19 - 130633972 AGCAGCTGGTGCAGAGATG
  129. s rn3.chr20 14527170 19 + 55296979 AGCAGCTGGTGTAGAGATG
  130. s canFam1.chr26 4431413 19 - 41009621 CACAACTGGTACACAGACA
  131. s fr1.chrUn 137770069 19 + 349519338 GGTGCCTCCGAAAGGGACG
  132. a score=71637.0
  133. s hg17.chr10 55251972 300 + 135413628 CACTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAAAAATGTaggaggaggaagaggaagagggatagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggaggaggagggggaaggggaCAGGCAGAAGGAGAG
  134. s panTro1.chr8 56163001 276 + 138322177 CTCTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAATGGAAAGTGGAAAAAATG------------------------TagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggagaaggaggaggaaggggaCAGGCAGAAGGAGAG
  135. s mm5.chr10 56176943 243 - 130633972 CTGTCTGTGGATGGAATGGACGTGGAAGGAGGCTGTGGGAAGAGGCGGGGAGCTGGTGGCCGAGGAGGAGGAGGAAGTGACAGTGGAGGAGGAAGAGGTAGAGAAGAAGTAGGGGGTGTAGAAATGGGAA---GAGAAAATGTAACAAGTTGTGGGGGAGGAGGGTTAGGGGGAGAAAGGGGAAGAGG---------------------------------------AAAAGTGGTAAAGGCAATGGGAGGTCTAGG---------AAGAGGCGGATGTGGGAGGGG---------AGCAGAG
  136. s rn3.chr20 14527189 243 + 55296979 CTGTCTGTGGATGGGACGGAAGTGGAAGGAGGCAGTGGGAAAAGGCGGGGAGCTGGTGGTCGAGGAGGAGGAGGAAGTGATGGTGGAGGAGGAGGAGGAAGAGAAGAGGCGGGGGTTGTAGAAATGGGAA---GAGAAAATGTAAGAAGTTGGGGGCGAGGAGGGTTAGGGGAAGAAAGGGGAAGAGG---------------------------------------AAAAGTAGTAAAGGCAATAGGAGGTTGAGG---------AAGAGGCAGCTGTGGGAGGGG---------AGCAGAG
  137. s canFam1.chr26 4431432 195 - 41009621 CACGTAGTGGATGGAGCCCAAGACGGAGGGGACAgaggagaaggaagaggaggtgatggt---ggggggagggag---ggaagtgaaggtagaagaggtgatg------------------------------gagaagaag---------agggaggagaaggtggggtggaaagtgggagaaatgg---------------------------aggtggaggaggaagaggaggaggaggaggaggaggggcagg---------------------------tgg---------aggagAG
  138. a score=139704.0
  139. s hg17.chr10 55252272 227 + 135413628 ATGTTTGGTGGATGGGCAAAATTTTCAAAAATATTTCTTTCGGTTTCAATAGGTAACATA------CAAATAGGTGTCTCTCTCCTAGAGAGTGAAGAATGTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
  140. s panTro1.chr8 56163277 227 + 138322177 ATGTTTGGTGGATGGGCAAAATTTTCAAACATATTTCTTTCGGTTTCAACAGGTAACATA------CAAATAGGTGTCGCTCTCCTAGAGAGTGAAGAATTTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
  141. s mm5.chr10 56177186 230 - 130633972 ATGCTAGGTGGATGGGGAGCGATCTCAAAAGAGTTCCTTTTTGGTTCTGTATCTGATGCA------CATGTGGGAGTCTCTCTCTTAGAGCTTAAGGAGTTTAAAATACGGGGTCTCAGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACCACATTAGGTTCC------GACCCGAGTTCCACCGCTCTGGAAATCGTTGGCAGAGTTGAGAAAGAAAAGTGAGACCAAGA
  142. s rn3.chr20 14527432 230 + 55296979 ATGCTGGGTGGATGGGGAACCATTTCAAAAGAGTTCCTTTTTGTTTCTGTATCGGAGGCA------CAAGTGGGAGTCTCTCTCTTAGAGCCTAGGGAGTTTAAAACGCGGGGTCTCCGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACAACGTCAGGTTCT------GACCCGAGTTCTACCGCTCTTGAAATTGTTGGTAGAGTTGAGAAAGAAAAGTGGGACCAAGA
  143. s canFam1.chr26 4431627 227 - 41009621 ATGTTTGGTGGTTTGGGAAGGATTTCGAAAATGTTCCTTCCGGCTTCAACTGTCAACAGA------CATGTGGGCATCTCTCTCCTAAAAACCGGGGAATTTAAAATGCAGGGCATT---GAAGGAGAAAGTTCCAAAGAACAGTCCGCGGGAGAGATGATGACATCAGGTTCT------GCCTGGAGTTCCACAGTTCTCGAAACAGTTGTCAAAGTGGAGTAGGAGGAGTGAGACGAAGG
  144. s galGal2.chr6 27913978 239 - 33893787 gTTTTAGGTGGGTCTGGAATGTTTTCTGTAACTTCTCCTTTGGTCTGAGGAGCTAGAAAACTTTGGCAAACGGGTTTCTTTATCCTAAAAGACGGAGGAGTTGGCTTGCGAGTTGGT---GGAGGAGAAAGTTCTTCAGGATAGTCATGGTGAGTGATGATTACAGAGGGGACCGCAGAGGGCTCCGGCTCAACTACTTCACAAGGTGTTGGAGAGGACAGAGGAGAAGAGCGAAGGCAAGG
  145. a score=27341.0
  146. s hg17.chr10 55252499 121 + 135413628 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTGTTCCTTCTATCATCAGTGTTTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
  147. s panTro1.chr8 56163504 121 + 138322177 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTCTTCCTTTCATAATCAGTGTGTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
  148. s mm5.chr10 56177416 118 - 130633972 GGAGGAAAAAG-------AAGAGCCA--G--------------------------AAGACA------------------------------------GAGATTTCAGCTGCTCTGTTTGCTGGACGATTAGGGTGTCTCTGTGTC---CCCCTTCTTTCTCTGAC-TCGTGGGCATCTTCAGTTGC--CAGCAGA
  149. s rn3.chr20 14527662 118 + 55296979 GGAGGAAAAAG-------AAGAGCCC--G--------------------------AAGACA------------------------------------GAGATTTCAGTTGCTCTGTTTGCTGTACGATTAGGGTGTCTCTGTGCC---CCCCTTCTTTCTCTGAC-CCACGGGCATCTTCGGTTGT--CACCATT
  150. s canFam1.chr26 4431854 121 - 41009621 AGAGAGAAATG-------AGGAGTCT--G--------------------------AAGACA------------------------------------GAGATTCCACATGCTGTGCTCCACGTGGGAGCAGGGGCTGGCCTGGCCTTGCTTCTCCTGTCTCGGGC-ACACTGGATTCTCCAGCTGC--AGGCAGG
  151. s galGal2.chr6 27914217 193 - 33893787 AGAAGCAAACACACTTTTAGGAGACT--GCTCTAGCGTGTTATCTCTTTCTTGCAAACAGATGCTGTGCGTTGGTGAACGGGTGGATTTGACATCAGGAGATTTCACTTGCTTCATTTCCTGCAAAGCCTGCTGCTCAAATTGTCTTGCCTTCTCTTTTACAGTTAACGTGGGGCCACTTATTTTTTGAAATAGT
  152. s danRer1.chr12 3416078 117 + 24175710 AAAACAGAGAG-------AATAATTTCGG--------------------------AAGAGA------------GTGACCCAC---------------GAGAGTCCTGACCTTGCCTCAACTTTAC-------GTCCTGCAAGGCC--------TGCTGCTCAAAC-TGTCGTGCCTGCTCTTTTAC--AGTCAAT
  153. a score=18054.0
  154. s hg17.chr10 55252620 34 + 135413628 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
  155. s panTro1.chr8 56163625 34 + 138322177 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
  156. s mm5.chr10 56177534 34 - 130633972 ACGTTGCTGCTACCTCTCTGGCTTGGGTGGCATC
  157. s rn3.chr20 14527780 34 + 55296979 AGGTTGCTGCTACCTTGCTGGCTTGGGTGGCATC
  158. s canFam1.chr26 4431975 34 - 41009621 GGGTTCCTACTACCTCTCTGGTTTGGAGGGGTTC
  159. s galGal2.chr6 27914410 34 - 33893787 GGACTGCTAATATCAACTCTGCTATGCTGATTTT
  160. a score=75824.0
  161. s hg17.chr10 55252654 151 + 135413628 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACTGACTCCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
  162. s panTro1.chr8 56163659 151 + 138322177 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACAGACTGCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
  163. s mm5.chr10 56177568 151 - 130633972 TGGCGCTTTCGCATTCAGCTCTCTGATTGGTGATCTG------------CCACTCCACCAGGTCTATGGTCTCTGGCCTGTT----TGGGGCT--TTCCACATGAGCCGCCTAGGAAAGCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
  164. s rn3.chr20 14527814 151 + 55296979 TGGTTTTTTCGCATTCAGCTCTCTGCCTGGTGATCTG------------CCACTCCACTAGGTCTATGGTCTCTGGTCTGTT----TGGAGTT--TTCCACATCAGCCGCCTAGGAAACCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
  165. s canFam1.chr26 4432009 151 - 41009621 CAGGGCTTTCCTTCCCACCTTCCGGCCTGCGGCTCCT------------CCGTGGCTCCAGCTCTAGGGTTTCTGGCCTTCT----GGGAAGT--TCCCACACTGGTCTCTGAGGGAAGCACACTGGCTGATGCCATATCCTCTGAAACATTTCCCTTGGGCCCCTCAG-
  166. s galGal2.chr6 27914444 139 - 33893787 CAGTTCCTTCATTCTCTGCTTTGAGTCTTTCCTGTTG------------CCACTGAACAGGGTCCATGATAACCGGCCTGCT----CAGAGAA--CCAGGCGCGTGCCTCTTAGTAACGTGAGCTGGTACTGTCCATGCACGGTGACT------------GCCTCCCAA-
  167. s danRer1.chr12 3416235 163 + 24175710 CAATCATCTCCTTGCTGTCCTTAAGGCTGGCCTTTAGCAGCTGCAGCTCCCACTGAACTGGATCCATCACCACCCTCCTACTCCGCTGAGATTCGTCCCACTTGTGCAACCGAG--AAGGTAATGTCCAG-----GAATGTCCTGAGCCTGAATTCGGGAATCCCATAAT
  168. a score=17919.0
  169. s hg17.chr10 55252805 66 + 135413628 AGACTTACTCTTGGCTTGTATTTTGGGTGAAAATGGGTCTACAAAATC---TGTTCTCTGTGAAATGTC
  170. s mm5.chr10 56177719 66 - 130633972 AGACTGACTCTTAACTTGTGTTCTGGGTGCCAACAGCTCTTCAAAATC---TGTTCGTGGCTGAAGGTC
  171. s rn3.chr20 14527965 66 + 55296979 GGACTGACTCTTAACTTGTGTTCTGGGTACAAATAGCTCTCCAAACTC---TGTTCCAGGCTGAAGGTC
  172. s canFam1.chr26 4432160 66 - 41009621 GGACTTACTCCTGGCTTGTGTTTTGGGCAAAAATGAGTCTATAAAATC---TGTTCTTAGTAAAAAGTC
  173. s galGal2.chr6 27914586 69 - 33893787 GGCATCTCTCAAGACTAATTGCATAGGAGAAAGAGTATCTAGGGCATCGCTTCTTTTCCGCAGTAACCC
  174. s danRer1.chr12 3416398 52 + 24175710 GGACTTACTCAGACCTCTCATACTGGGTGAATACATGTCTAAGAGGTA---ACTC--------------
  175. a score=243755.0
  176. s hg17.chr10 55252871 253 + 135413628 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCCTCATCAGATAGAAATGTGAATTTTCTTGCAGACTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAAGA
  177. s panTro1.chr8 56163914 253 + 138322177 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCTTCATCAGATAGAAATGTGAATTTTCTTGCAGCCTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAATA
  178. s mm5.chr10 56177785 253 - 130633972 TGAGTTTGTTGAC--------CTTTGACCTATACTTTCCATGTAAAGGGGATTATGGGTACTTAAGTTATCCTCATCAGGAACAAATGAGAACGTCCTTGCTGGGTTAGGCTGGCTCTCCTTAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCATCGCGATGACTGCTCCTGTCTTCTGGGACTGAGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
  179. s rn3.chr20 14528031 250 + 55296979 GGAATTTGTTGAC--------CTTTGACCTATACTTTCCATATAAAGGGGGTTATGGGTACTTAAGTCATCCTCATCTGGAAGAAATGAGAACGTCCTTGCTGGGTTAGCTTGGTTG---TCAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCGTCACGATGACTGCTCCTGTCTTCCGGGACTGGGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
  180. s canFam1.chr26 4432226 253 - 41009621 GGAGTTTGTTGGT--------CTTGGATCTACAGCTTCCTTATAAAGAGTACTGTGGAGACTGAAGGCGTCCTCCTCAGACATCAGTGTGAACTTCCTTGCTGACTTGGGCTGGTTGTTCCTAAGGGATCCATCTACATGAGCCTGCTTGTGAGCCTCAATAGTGCTGGAAGGAAAAGGCATCACACTGTGTGGACTTTTCCTGTCTTCTGAGACTGACTTATCTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGGA--------AAAGA
  181. s galGal2.chr6 27914655 253 - 33893787 AGCAGCAGCAGGA--------CTTTGAGTGACACCTTCCACATACAGTGGGTTTTGAGTAGTTAGTGGGTTCTCGTCAGATAAGAAAGTAATGTTACTTGAAGATTTGGGGAGGTTATTGTTCAATGATCCATTGATATTAGATTGCTTGTGAGCCTCAATAGCACGGGAAGCAAAGCTGCTTATAACTCTCTGCCGATCTCCTTCTTCTAAGACTGACTTTTTTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGAA--------AAAGA
  182. s danRer1.chr12 3416450 277 + 24175710 CGATTTTGGTGCTCAGGGCTGCCAAGAGTGACATCATCACGGTACAGGGGGTTGGTTGTAGTAAGTGGGTTGTCATCTGAAAGAAAGGTAATGTTGCTCTCCGACTTGGGAAAGTTGTTGAGCAGGATTCCGTTGGCGGTGGACAGCTTGTGAGCAGTGATAGCACGGGAAGCGAATGAGCTAATGAGACGCTGCCGATCACCATCCTTCAGAACACACCTCTTAGTCCTGATTTCAGCAAGTGTGGAAAGAGATAAAGATGAACTTAACAGAGAAT
  183. a score=136951.0
  184. s hg17.chr11 116124407 94 + 134452384 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
  185. s panTro1.chr9 118123572 94 + 136640551 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
  186. s mm5.chr9 77776147 94 - 124177049 TCAC--ATATCCTCCACACTCCACTTGTAGGCAAGCTCCTCCACAGCCTTCTTGCTGGCGAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
  187. s rn3.chr8 79766056 94 - 129061546 TCAC--ATGTCCTCAACACTCCACTTGTAGGCAAGCTCCTCCACAGCTTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
  188. s canFam1.chr5 72268290 94 - 92064832 TTAC--ATATCCTCAACACTCCACTTGTAGGCAAGTTCCTCCACCGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
  189. s galGal2.chr24 4774582 96 + 5910111 TTGCGAAAGTCTTCAATGCTCCACTTGTATGCAAACTCCTGAGCTGCCTTCTTGTTGGCCATCCTGGCAAAGAACTGCTGCTCAAATCCATTGGAC
  190. s fr1.chrUn 206483220 94 + 349519338 TCAC--ATATCTTCTACACTCCACTTATAGGCTGCCTCCTGAGCAGCTCTTTTATCTGCCATTCTCTCATAGCGTTTCTTCTCAAAACCATTTGAC
  191. a score=311622.0
  192. s hg17.chr11 116206508 55 + 134452384 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
  193. s panTro1.chr9 118206938 55 + 136640551 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
  194. s mm5.chr9 77840023 55 - 124177049 ATGCAGCCCCGGACGCTCCTCACTGTGGCCCTCTTGGCTCTCCTGGCATCTGCCC
  195. s canFam1.chr5 72342544 55 - 92064832 ATGCAGCCCCGGGTCCTCCTCGTCGCTGCCCTCCTGGCGCTCCTGGCCTCCGCCC
  196. a score=21699.0
  197. s hg17.chr11 116211733 24 + 134452384 TCACTGGGTGTTGAGCTTCTTAGT
  198. s panTro1.chr9 118212083 24 + 136640551 TCACTGGGTGTTGAGCTTCTTAGT
  199. s mm5.chr9 77844334 24 - 124177049 TCACTGGGCAGTCAGAGTCTCGCT
  200. s canFam1.chr5 72346944 24 - 92064832 TCACTGCGCGTTCAGCTTCTTGGT
  201. a score=166504.0
  202. s hg17.chr11 116211757 354 + 134452384 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCTTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCTGCGCGCAGCGGCTCCAC
  203. s panTro1.chr9 118212107 354 + 136640551 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCGGCGCGCAGCGGCTCCAC
  204. s mm5.chr9 77844358 348 - 124177049 GGCCTTGTCGATCACACTCTGG---------ACTTGGGTCTTAAGCGTCTCCAGCATGGGCATC-AGACTATGGCGCAGGTCCTCCAGCGCAGGTCTGGCTTTCTCGCCAAGTGTCTTCAGGTGGGTTTTGGCCCTGGTGTGGTACTCGTTCAAGGTAGGGTTGC------TCTTGAGCTCAGCCAGGCGCTGGGCCAGGCTCTCGCGCATCTGTTCGCTGTGGGGCGCTAGCTGTGTGCGCAGAGAGTCTACGTGTGTGCGCATGCGGTCGCGAAATTCCTCAGCCACAGGGGACAGTCTCCCTTGCAGCTCCTGCAGCTTCTGGCGCGCGCTCTCCTGCAGCTCGGCGCCCAGAGGCGCCAC
  205. s canFam1.chr5 72346968 354 - 92064832 GGCCTCGTCGATGGCAGCCAGC---------AGGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGCAGGTCCTCGAGCGCGGGCCTGGCCTTCTCGCCGAGCGCGCTCAGCTGCTCGCTGGCCCTGGCGTGGTACTCGGCCAGGCTGGCGCCGCCGCCCTCCTTGAGCGCCTGCAGCCGCGCGGCCAGGCGCTCGCGCAGGTCGTCGCTGTAGGGGGCCAGCTGGGCGCGCAGCGCGTCCACGTGGGTGCGCGCGCGGTCCCGCAGCTCCTCGCCCAGCGGGCTCAGCTTCTCCTGCAGCTCCTGCAGCTTCTGGCGCGCGCCCTCGCGCAGCTCCGAGCCCAGCGGCGCCAC
  206. s galGal2.chr24 4799439 363 + 5910111 GGACTTCTGGAGTTCGTCCAGGAAGGAGATCAAGCGGTTCTTGAGGTTCT-CAGCATAGGGGGTGAGGCGCTCCCTGAATTCCTGCACCAGAGGCGTCATCTTCTCACGCAGGTTGCTGAGCTGCTCCATCACCTTGGCCTGGTACTCGGAAGCCTGGGGGATGCCCTTCTCGCGGATCTCCTCCAGCTTCTGGCTCAGCTTCTGCCGCAGCTCATCGCTGTATGGCGCCAGGTTCTTGCGCAGCTCCTCCACGTGCCCACGCAGACGATCCCGCGCCTCCTCAGCCACCGGGGTCAGCTTGGCCTGCATCAGCTCCACCTTCTGCTTGGTGAGCTCCTTCAGCTCCTGAGCCACGGGCGTCAG
  207. a score=84013.0
  208. s hg17.chr11 116212111 105 + 134452384 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
  209. s panTro1.chr9 118212461 105 + 136640551 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
  210. s mm5.chr9 77844706 105 - 124177049 CTTCTGGCGGTAGAGCTCCACATCCTCTTTCCATTTCTTCTGGAATTCGTCCAGGTAGGGCTGCACCTTCTGTTTCACTTCCTCTAGGTCCTTGTTCATCTCCTG
  211. s rn3.chr2 192507462 102 + 258222147 CTCCTCTCGGAAATGCACGATCTCATCCTGC---TTCTCCTGCAAGTCTTCCAGAAGCTGCCGCCGCTCAGCCTTCTGCTGCTCCAGCTCCTTCTCCAGCTCCTG
  212. s canFam1.chr5 72347322 105 - 92064832 CTTCTGGCGGTACAGCTCCACCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTCTGCTTCACCTCCTCCAGGTCCTTGCTCATCTCCTG
  213. s galGal2.chr24 4799802 105 + 5910111 GCGCTGGCGGTACTGCTCCAGCTCCTCCGTCCACTTGGCGGAGAACTGGTCCAGGAAGGGCCGGATCTTCTCCTTCACCTCCTCCAGGTCCTTGGTCAGCTCAGC
  214. a score=57194.0
  215. s hg17.chr11 116212216 121 + 134452384 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
  216. s panTro1.chr9 118212566 121 + 136640551 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
  217. s mm5.chr9 77844811 121 - 124177049 TCTCACCCAATCTGTTTCTTTCTCCAGGTTATCCCAGAAGTCCCGAGTCAATGGGCCCAGCCGTTCCTGCAGCTGACTAACGGTTGAACCCAGAGTGTCCCAGTTTTCCAGGAGATTCAGG
  218. s canFam1.chr5 72347427 121 - 92064832 CCGCAGCACCTCCGTCTCCTTCTCCAGGTTATCCCAGAACTCCTGCGTGACCGGGCCGATCTGTTCGCGCAGCTTGGTCACCGTGCTGCTCAGGCTGTCCCAGTTGTCCAGGAGTTTCAGG
  219. s galGal2.chr24 4799907 121 + 5910111 ACGCAGAGCCTCGGTGTCCTTCAGCCACATCTCGCGCACCTCCTTGTAGTAGGGAGCCATGTCCTCACGCAGCTTGGCAGCCGCGGCACTCAGCGTGTCCAGGTTGTCAGCCAGCTTCAGG
  220. a score=4872.0
  221. s hg17.chr11 1812377 30 + 134452384 ATGCTCCACCTGCATGGCTG--------------GCAAACCATG
  222. s panTro1.chr9 2001217 30 + 136640551 ATGCTCCACCTGTATGGCTG--------------GCAAACCACG
  223. s mm5.chr7 130142453 26 + 133051633 -----CCAACTGGACTACCGT-------------GTAGAAGATG
  224. s rn3.chr1 202843225 26 + 268121971 -----CCAACTAGACTGCCTT-------------GTAGAAGATG
  225. s canFam1.chr18 56425269 44 + 66173745 AGGCTCCACCTGTGTGACTCCACCCGTGTGACCGACAAACCATG
  226. s danRer1.chrNA 165962846 24 - 390413307 -----AGTTCAGGAAGTCCA--------------GGAAGAGA-G
  227. a score=333744.0
  228. s hg17.chr12 38440094 227 + 132449811 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
  229. s panTro1.chr10 39016533 227 + 135301796 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCGTAGACGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
  230. s mm5.chr15 91666098 227 + 104138553 TTACTCCACGTCAGAAGCGTCGTTGTCGGAGAGATGATAGTTGCTTCCCTTCACGCGGATGTACTCAATGTACCTCCCTTCATCCGAGTCGG---CAGCGCCACATGAACATAGCCGGTGGTCAAAGAGCGATTCGATTTCCTCCAATTTTTTCCCCTTGGTTTCAGGGAGGCAGCCATAGACAAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAATGCTC
  231. s rn3.chr7 129719269 227 + 143082968 TCACTCCACGTCCGAGGCGTCGTTGTCGGAGAGATGGTAGTTACTTCCCTTCACGCGGATGTACTCGATGTACCTGCCCTCGTCCGAGTCCG---CGGTGCCGCAGGTGCACAGCCGGTGGTCGAAGAGCGATTCGATTTCCTCTAGTTTTTTCCCTTTGGTTTCAGGAAGACAGCCATAGACGAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAACGCTC
  232. s canFam1.chr27 32235556 227 - 49087461 TTATTCCACATCAGAAGCATCGTTGTCAGAAAGATGATAGTTACTTCCCTTCACCCGAATATATTCAATATATCGCCCTTCATCAGAATCTG---AAGCACCACATGTACATAACCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTCCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACACCAGCGAATCCAGCATACAGGAAGAAGGCTC
  233. s galGal2.chr1 179729132 227 - 188239860 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGGTAATTACTTCCCTTCACCCGAATATATTCAATATACCTCCCTTCATCAGAATCTG---ACATACCACATGTACATAGCCTGCTTTCAAACAAAGATTCAATTTCCTCTAGTTTTTTCCCTTTAGTCTCAGGAAGGCAGCCATAGATGAAAAGGAGTCCCAGGCCAGCAAACCCTGCGTACAGAAAGAAGGCTC
  234. s fr1.chrUn 213944794 227 + 349519338 CTAGTCCACATCAGAGGCGTCGCTCTCAGACAGGCGGTAGTTGCTGCCCTTTACCCGGATGTACTGCACGTTCCGGCGGTCGTTGCGGGAGG---AGGCTCCGCAGGAGCAGAGCGGACCGGAGAACAGGCTCTCGATGTCCTCCAGCTGCAGGCCCTGGGTCTCCGGGAGGCAGCCCAGGATGAAGAAGAGGCCCAGCACCACCAGGCCAGCGTACATGAAGAACGCCC
  235. s danRer1.chrUn 27538197 206 + 367113659 TCACTCCTCCTCATCCTCGTCTTCATCAGAG---CGGGAGTTTCCTCCGTTTACCCGCATGTACT---------------------GATCTGTGTGGGCTCCGCAGCTGCAGAGTCGCCTGCTGAACAGAGACTCGATCTCCTCCAAGCGCAAACCCTTGGTCTCCGGCAGACACCCCGACACGAACACGAAGCCCAGCAGAGCCAGAGCAGCGTACAGGAAAAACGCTC
  236. a score=115495.0
  237. s hg17.chr13 112381694 259 + 114142980 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCCGTGATGAATCCCG-TGATGAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTACAGCTGCCAG
  238. s panTro1.chr14 95994697 259 + 97804244 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCTGTGATGAATCCCG-TGATGAGCCGCTGATCCGAGCTCGGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCACAGGAGTGCCTCAGGGAGACAGAAGCAGTTACAGCTGTCAG
  239. s mm5.chr8 12764663 188 + 128688707 ATTTGTTCACCAGAG----TGTCCTGGCCTCCTGCCTATGTGGACTCATTCCCAAGG-ACCAGCCT-TGAAGGACGCA---ATGTAGGGCTCC---------ATGGA------------GGAGGGAGG-TCTGTGTGACA-----------------------------------------CTGGGACTTGCCACAGGTCAG--TGATTGTTCAGAGGTCACAGGAGTGCCACCCTCAGGCAGAGTCATCTGTCTTTTCCAG
  240. s rn3.chr16 8607378 190 - 90224819 ATCCATTTACCAGAG----CGACCTGGCCTCCTGCCTAGGGGGGCTCATTCCCAAGG-ACCGGTCT-TGAAGGGTGTA---TTATATGGTTTC---------ATGAA-----------GGGAGGGAGG-TCTGTGTGACC----------CTGGGACACCGCT------------------------------ACAGGTCAG--TGATTGTTCGGAAGTCACAGGAATGCCACCCTCAGGAAGAGTTATCTATCTTTTCCAG
  241. s canFam1.chr22 63116876 177 + 64236280 A------------------TGTGCTGGTCTGCTCAGGGCAGGAGCTCTTCGCCGGAT-GTCAGTCC-CGA--GACGCACATGCCTGGGCTTCT-------------CCCTCACAGGACTGCAGCAAGGACCACCACGGTGGACACTGAGGAGGCCCCGCCAGGCCGA----------------GGGATGGAGGAGAGGCCAT--CGATG------GAGCAGCATGGGGTCGTCAT--------------------------G
  242. a score=694393.0
  243. s hg17.chr14 98710240 325 + 106368585 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
  244. s panTro1.chr15 99208107 324 + 106954593 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTA-GGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
  245. s mm5.chr12 102664235 325 + 115071072 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTCTTGAAGACCTTGCCGCAGTACTCACATGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
  246. s rn3.chr6 132299612 325 + 147642806 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTACTGTAGACACTGAAGGGCATCTGGCAGATATCGCAGCGGTACACCTCCTTGCCGATCTGACCGTGCGTCTTCATGTGGCGCGTAAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTTTTGAAGACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
  247. s canFam1.chr8 70559093 325 + 77374719 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAGGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGCCGGCCCTCCTTGGAGCTc
  248. s galGal2.chr5 44593849 325 + 56310377 TTAGCTTCTTTCTGCCTGCTCAATTTTGACGTCATTTGTCAGCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAAACACTGAAGGGCATCTGGCAAATGTCGCAGCGGTAGACCTCCTTCCCTATCTGGCCATGCGTTTTCATGTGACGCGTCAGCTTACTGCTCTGGGCACATGCATAGTTGCAGAGCTCGCATTTGTAAGGCCGCTCTCCAGTGTGGCTCCGACGGTGCACCGTCAAATTGCTGCAGTTCTTAAAGACCTTGCCACAGTACTCACATGTATCGCTCCTGCGCCCTTCCTTCGAGCTG
  249. s fr1.chrUn 275909939 325 + 349519338 TTACACCGTCTCTGCTTGTTCCAGTTTGATGTCATTGGTCATCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGAGTGCTGTACACACTGAAAGGCATTTGGCAAATGTCACAACGAAAGACCTCCTTACCAAGCTGGCCATGCGTCTTCATGTGGCGCGTTAGCTTTGAGCTCTGGGCACACGCGTAGTTGCACAGCTCACACTTGTAGGGCCTCTCACCCGTGTGACTGCGTCGGTGCACTGTCAGGTTGCTGCAGTTTTTAAAAACTTTGCCACAGAACTCACAGGTGTCAGACCGCCGGCTGTCCTTTGAGCTG
  250. s danRer1.chrUn 103629515 325 + 367113659 TTAGCTTCTCTCTGCTTGTTCAATTTTGACCTCATTCGTCATCAAATGTTCCCCATGCCACTTTTTCATGTGTTTCTCAAGCGTGCTGTAGACGCTGAAGGGCATTTGGCAAATGTCACAGCGGTACACTTCCTTACCGAGCTGGCCGTGTGTCTTCATGTGGCGGGTGAGCTTGCTGCTCTGGGCGCAGGCGTAGTTACAAAGCTCACACTTGTAGGGCCTCTCGCCTGTGTGGCTGCGTCTGTGCACTGTCAGATTGCTACAGTTCTTGAACACCTTCCCACAGTACTCACAGGTGTCACTCCTCCGGCTCTCTTTCGAGCTA
  251. a score=20235.0
  252. s hg17.chr14 98710565 24 + 106368585 ggccgcccggggcccgggccgccc
  253. s panTro1.chr15 99208431 24 + 106954593 ggccgcccggggcccgggccgccc
  254. s mm5.chr12 102664560 24 + 115071072 GGCCTCCCAGGACCCGGACCACCC
  255. s rn3.chr6 132299937 24 + 147642806 GGCCGCCCAGGACCCGGGCCACCC
  256. s canFam1.chr8 70559418 24 + 77374719 ggccgcccggggcccgggccgccc
  257. a score=4011.0
  258. s hg17.chr14 98710589 2 + 106368585 AG
  259. s panTro1.chr15 99208455 2 + 106954593 AG
  260. s mm5.chr12 102664584 2 + 115071072 AG
  261. s rn3.chr6 132299961 2 + 147642806 AG
  262. s canFam1.chr8 70559442 2 + 77374719 AG
  263. s fr1.chrUn 275910285 2 + 349519338 AG
  264. s danRer1.chrUn 103629867 2 + 367113659 AG
  265. a score=517186.0
  266. s hg17.chr14 98710591 277 + 106368585 GTGCGGGGTGCTGCCTCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
  267. s panTro1.chr15 99208457 277 + 106954593 GTGCGGGGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
  268. s mm5.chr12 102664586 277 + 115071072 GTGAGGTGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCGGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTTGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGATGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAATGGGTCCTTCATGAAGTGGCGCGATGCTGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCAGATGGGATGAGGGCGGCAGGTGGCAGCTCCAGGTCTTTCTCCACCTTGATGCGC
  269. s rn3.chr6 132299963 277 + 147642806 GTGAGGCGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTGGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGACGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGGCGCGACGCCGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGATGGGATGAGGGCGGCGGGTGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
  270. s canFam1.chr8 70559444 277 + 77374719 GTGCGGCGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGGCGCGCGTCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGCCGCGACGCGGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
  271. s galGal2.chr5 44594200 277 + 56310377 GTGGGGGGTGCTGCCTCCGGAGGCCGTGCCGCTGCGCCCTGAGAGCCCCCCATCCAGCATGTCCCCCGGCGGGGTGGAGAAACGCAGGCTCCCATTCTCCGACGAATGCTCGGAAGAGGTGGCGAAGGGAGATTGTCGGGAGTCTGTGAATCCTAGAAACGGATCCTTCATGAAGTGCCTTGATGCCGCGTACCCTACCAGCCACTGGGAGTAAACATTTTCGGAAGGTATTATTGTTGCTGGTGGCAAGTCCAAATCTTTCTCAACTTTTATTCGT
  272. s fr1.chrUn 275910287 277 + 349519338 GTGAGGCGTGCTGCCTCCACTTGCGGTCCCACTACGGCCCGACAAGCCACCGTCCATCAGGTCTCCTGGGGGCGTGGAGAAGCGCAGGCTTCCATTTTCAGAGGAGTGCTCCGATGAAGTGCCGAAGGGAGATTGTCTCGAGTCACTGAAGCCTAGAAAAGGGTCTTTTATGAAATGGCGAGAGGCAGCATAGCCCACTAACCACTGGGAGTAGACATTTTCAGAGGGTATGAGGGGTGCCGGGGAACCATCCCCGTCCTTCTCTGTCTTTATCCTC
  273. s danRer1.chrUn 103629869 277 + 367113659 GTGCGGGGTGCTGCCTCCGCTAGCAGTACCACTGCGGCCGGAGAGGCCCCCGTCCAGCAGGTCCCCTGGCGGCGTAGAGAATCGCAAGCTTCCGTTCTCGGAGGAGTGTTCCGAGGAGGTGGCGAATGGAGATTGTCTGGAGTCGGTGAAGCCAAGGAAAGGATCTTTGATGAAGTGGCGGGATGCTGCATAGCCCACCAGCCACTGGGAGTAGACATTTTCAGATGGGATTAGGGGGGCTGGGGGTATGTCCAAATCCTTTTCAATTTTGATCCTC
  274. a score=56079.0
  275. s hg17.chr14 98710868 71 + 106368585 TTG------------GCGGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
  276. s panTro1.chr15 99208734 71 + 106954593 TTG------------GCGGAG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
  277. s mm5.chr12 102664863 83 + 115071072 TTGGCCGCGTGCAGCGCGGGA---CCACCGAGCCCAGGGCTGGGCAGCGGTGCTGGCTTGCGTGGGAAGAGAGCTGGAAAGGG---------------------------------------CTC
  278. s rn3.chr6 132300240 83 + 147642806 TTGGCCGCGTGTAGCGCAGGA---CCACCAAGCCCCGGGCTGGGCAGCGGTGCGGGCTTGCGTGGGAAGAGCGCTGGGAAGGG---------------------------------------CTC
  279. s canFam1.chr8 70559721 71 + 77374719 TTG------------GCCGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCCGGCTTGCGCGGGAACAGCCCCGGGAAGGG---------------------------------------CTC
  280. s galGal2.chr5 44594477 110 + 56310377 TTA------------GATGAG---TTATTTAAGCTGGGGCTTGTGATAGGTGTTGGCTTCCGAGGGAACAAGTTTGGGAAGGGCTCGCCTGGGCCAAAGTTTCTTCCATTGACTGTCCCCTCCTC
  281. s fr1.chrUn 275910564 85 + 349519338 TTACTC---------ATGGAG---TTAGCCAGGCCAGAACCAGCGACGGAAGCGGGTTTGTAGGGAAATAAGCTTGGAAGAGA----------------------------ATCATCCGATCCGC
  282. s danRer1.chr5 4282954 74 + 40038624 TTG------------GCGGAAGATCCAGAGAGGCTGGAGCTGGAAATGGGCATTGGCTTACGATGGAACATCGCAGAGATGGA---------------------------------------ATC
  283. a score=4995.0
  284. s hg17.chr14 98710939 5 + 106368585 GGTGC
  285. s panTro1.chr15 99208805 5 + 106954593 GGTGC
  286. s mm5.chr12 102664946 5 + 115071072 TGCGC
  287. s rn3.chr6 132300323 5 + 147642806 TGCGC
  288. s canFam1.chr8 70559792 5 + 77374719 GGCGC
  289. s galGal2.chr5 44594587 5 + 56310377 GGTGC
  290. s fr1.chrUn 275910649 5 + 349519338 TGTTC
  291. a score=9825.0
  292. s hg17.chr14 98710944 10 + 106368585 CTGGCGCGAA
  293. s panTro1.chr15 99208810 10 + 106954593 CTGGCGCGAA
  294. s mm5.chr12 102664951 10 + 115071072 CTGGCGCGAA
  295. s rn3.chr6 132300328 10 + 147642806 CTGGCGCGAA
  296. s canFam1.chr8 70559797 10 + 77374719 CCGGTGCGAA
  297. s fr1.chrUn 275910654 10 + 349519338 CTGCCATTAA
  298. a score=42070.0
  299. s hg17.chr14 98710954 72 + 106368585 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
  300. s panTro1.chr15 99208820 72 + 106954593 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
  301. s mm5.chr12 102664961 69 + 115071072 GGCCCCGCCGCGCCCGTTCACTGCACCCGGTGCACCCGCGTCCCCACAGCCAACAG---CTCCGGCATCACC
  302. s rn3.chr6 132300338 69 + 147642806 GGCCCCGCCACGCCCGTTCACTGCGCCCGGTGCACCTGCATCCCCGCAGCCACCAG---CTCCGGTGTCACC
  303. s canFam1.chr8 70559807 72 + 77374719 gccgccgccgcgcctgttgaccgcgccgccggtgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
  304. a score=1846.0
  305. s hg17.chr14 98711026 19 + 106368585 cgcgtccccgccgcccgcc
  306. s panTro1.chr15 99208892 19 + 106954593 cgcgtccccgccgcccgcc
  307. s mm5.chr12 102665030 10 + 115071072 CGTGTCGC---------CT
  308. s rn3.chr6 132300407 10 + 147642806 CGCGTCGC---------CT
  309. s canFam1.chr10 63975552 18 + 72717409 AGTGTCCCTGTGGGCC-TC
  310. a score=1381.0
  311. s hg17.chr14 98711045 5 + 106368585 GCACG
  312. s panTro1.chr15 99208911 5 + 106954593 GCACG
  313. s mm5.chr12 102665040 5 + 115071072 GCACG
  314. s rn3.chr6 132300417 5 + 147642806 GCACG
  315. s canFam1.chr10 63975570 2 + 72717409 G---G
  316. s fr1.chrUn 86333360 5 + 349519338 GGATA
  317. a score=13475.0
  318. s hg17.chr14 98711050 19 + 106368585 CTTCAGGAAGGC-GCCGCGC
  319. s panTro1.chr15 99208916 19 + 106954593 CTTCAGGAAGGC-GCCGCGC
  320. s mm5.chr12 102665045 19 + 115071072 CTTCAGGAAGGC-GCCCCGC
  321. s rn3.chr6 132300422 19 + 147642806 CTTCAGGAAGGC-GCCTCGC
  322. s canFam1.chr10 63975572 20 + 72717409 CCTCGGCCAGGTGGCCGCGC
  323. s galGal2.chr5 44594680 19 + 56310377 TTTCATGAAGCT-ACTCCTC
  324. s fr1.chrUn 86333368 19 + 349519338 CCCGGTGAAGTC-GTGCTGC
  325. a score=43602.0
  326. s hg17.chr14 98711069 105 + 106368585 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
  327. s panTro1.chr15 99208935 105 + 106954593 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
  328. s mm5.chr12 102665064 87 + 115071072 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAGGGCCAGAGCCTTCTCATCCGCCAGAGCCGCA-
  329. s rn3.chr6 132300441 87 + 147642806 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAATGCCAGCGCCTTCTCATCTGCCAGAGCCGCA-
  330. s canFam1.chr10 63975592 92 + 72717409 TTATGCTTCTCGCCCAGGA---------CCTGGTGGAAGGCCTCGCTGAAG-TGCTGCATGGAGCTGAGCACCATGCCCTGCATGACCTCGGGCAGCG-------------------------CGCG-
  331. s galGal2.chr5 44594699 105 + 56310377 TTCTGTTTCTCAGCTAGCA---------------------TGTCATTGTAT-TGCTGGATGGCACCGAGACTTACATTCTCTATCACTTTTCCCAGGACAAGGGATTTCTCATCTGGCAGTGATTTG-
  332. s fr1.chrUn 86333387 120 + 349519338 TTCTCGTAGTGCTCCCGCAGACGTCTCAGCAGCGTGAAGGTCTTGTCGCACATGGTGCACTGCA--TGGGCCGGTG-----CATGAGCTTGTGCCGCTCGAACGCCGGCTCGTTGGCGAGGATCTTC-
  333. s danRer1.chrUn 103630787 106 + 367113659 TTCCGATTGTCAACTATTA---------------------AGTTATTGTAC-TGCTGGATGGAGCTGAGCCCTACATTTTCCACCATCTTTCCTAACGAAAGGGTCTTCTCATCTGAAGGAGGCTTTG
  334. a score=10567.0
  335. s hg17.chr14 98711174 32 + 106368585 gccgcgccgccccccgcgcccgggaccccggg
  336. s panTro1.chr15 99209040 32 + 106954593 gccgcgccgccccccgcgcccgggaccccggg
  337. s mm5.chr12 102665151 29 + 115071072 GCTG---CAGCCCCTGCGCCCGCCACCCCCGG
  338. s rn3.chr6 132300528 29 + 147642806 GCTG---CAGCCCCCGCGCCCGCCACCCCTGG
  339. s canFam1.chr10 63975684 26 + 72717409 GCCC--TCGTCGCCCACGCCCACCACCG----
  340. a score=4398.0
  341. s hg17.chr14 98711206 12 + 106368585 cACCCCAC---CACC
  342. s panTro1.chr15 99209072 12 + 106954593 cACCCCAC---CACC
  343. s mm5.chr12 102665180 12 + 115071072 TGGCACGC---CACC
  344. s rn3.chr6 132300557 12 + 147642806 TGGCACAC---CACC
  345. s canFam1.chr8 70560183 15 + 77374719 CACCCCGCCCACGCC
  346. a score=-114.0
  347. s hg17.chr14 98711217 1 + 106368585 C
  348. s fr1.chrUn 275910877 1 + 349519338 A
  349. a score=135397.0
  350. s hg17.chr14 98711218 72 + 106368585 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
  351. s panTro1.chr15 99209084 72 + 106954593 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
  352. s mm5.chr12 102665192 72 + 115071072 TCCGTTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGCCGGCTCTCGTTCTCCAG
  353. s rn3.chr6 132300569 72 + 147642806 CCCATTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGTCGGCTTTCATTCTCCAG
  354. s canFam1.chr8 70560198 72 + 77374719 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
  355. s galGal2.chr5 44594806 72 + 56310377 GCCGTTTTCTCGGTTACGACTCAGCTCTGAGTCCATACTAAAGCTTGACTCTGGCCTGCTCTCATTTTCCAA
  356. s fr1.chrUn 275910878 72 + 349519338 GCCGTTCTCCCTGTTCCGGTATAATTCGGACTCCATGCTAAAGTTTGATTCTGGTCGACTCTCACTCTCTAG
  357. s danRer1.chrUn 103630894 72 + 367113659 GCCATTTTCCCTATTCCGACAGAACTCAGAGTCCATGCTGAAGTTTGACTCAGGCCTGCTTTCATTTTCCAA
  358. a score=501.0
  359. s hg17.chr14 98711290 1 + 106368585 T
  360. s panTro1.chr15 99209156 1 + 106954593 T
  361. s mm5.chr12 102665264 1 + 115071072 C
  362. s rn3.chr6 132300641 1 + 147642806 C
  363. s canFam1.chr8 70560270 1 + 77374719 C
  364. s galGal2.chr5 44594878 1 + 56310377 C
  365. s fr1.chrUn 275910950 1 + 349519338 t
  366. a score=295.0
  367. s hg17.chr14 98711291 1 + 106368585 A
  368. s panTro1.chr15 99209157 1 + 106954593 A
  369. s mm5.chr12 102665265 1 + 115071072 A
  370. s rn3.chr6 132300642 1 + 147642806 A
  371. s canFam1.chr8 70560271 1 + 77374719 A
  372. s galGal2.chr5 44594879 1 + 56310377 t
  373. a score=33922.0
  374. s hg17.chr14 98711292 47 + 106368585 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
  375. s panTro1.chr15 99209158 47 + 106954593 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
  376. s mm5.chr12 102665266 44 + 115071072 GCAGCTCCTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
  377. s rn3.chr6 132300643 44 + 147642806 GCAGCTCTTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
  378. s canFam1.chr8 70560272 47 + 77374719 GCAGctcctcctcctcctcctcctcctcctcgtcgtcctcctcGGGC
  379. a score=21186.0
  380. s hg17.chr14 98711339 20 + 106368585 TCGTGGCCCAGCGACGGGTC
  381. s panTro1.chr15 99209205 20 + 106954593 TCGTGGCCCAGCGACGGGTC
  382. s mm5.chr12 102665310 20 + 115071072 TCGGGGCCCAGAGATGGGTC
  383. s rn3.chr6 132300687 20 + 147642806 TCGGGTCCCAGAGATGGGTC
  384. s canFam1.chr8 70560319 20 + 77374719 TCGTGGCCCAGCGACGGGTC
  385. s galGal2.chr5 44594918 20 + 56310377 TCATGGCCCAGGGAGGGATC
  386. a score=13223.0
  387. s hg17.chr14 98711359 13 + 106368585 GCTCTCGTGGTGG
  388. s panTro1.chr15 99209225 13 + 106954593 GCTCTCGTGGTGG
  389. s mm5.chr12 102665330 13 + 115071072 GCTCTCATGGTGG
  390. s rn3.chr6 132300707 13 + 147642806 GCTCTCATGGTGG
  391. s canFam1.chr8 70560339 13 + 77374719 GCTCTCGTGGTGG
  392. s galGal2.chr5 44594938 10 + 56310377 GCTCTCA---TTC
  393. s danRer1.chrUn 103631014 13 + 367113659 GCCCTCGCCTTTG
  394. a score=0.0
  395. s hg17.chr14 98711372 3 + 106368585 CGG
  396. a score=4230.0
  397. s hg17.chr14 98711372 3 + 106368585 CGG
  398. s panTro1.chr15 99209238 3 + 106954593 CGG
  399. s mm5.chr12 102665343 3 + 115071072 CGG
  400. s rn3.chr6 132300720 3 + 147642806 CGG
  401. s canFam1.chr8 70560352 3 + 77374719 CGG
  402. s galGal2.chr5 44594948 3 + 56310377 CTG
  403. s fr1.chrUn 275910990 3 + 349519338 TGG
  404. a score=1089095.0
  405. s hg17.chr14 98711375 631 + 106368585 AAGTCACCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCTGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGGGGACTGAAGAGAGGCGGCGTGCCCGGCAGGCGGCCCT
  406. s panTro1.chr15 99209241 631 + 106954593 AAGTCGCCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCCGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATC

Large files files are truncated, but you can click here to view the full file