/test-data/rr.csfasta

# Mon Sep 28 22:46:46 2009 /share/apps/corona/bin/filter_fasta.pl --output=/data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/results.01/primary.20090929010043704 --name=solid176_20090923_Somali_Wild_Ass_a --tag=R3 --minlength=50 --mincalls=25 --prefix=G /data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/jobs/postPrimerSetPrimary.849/rawseq 
# Cwd: /state/partition1/home/pipeline
# Title: solid176_20090923_Somali_Wild_Ass_a
>853_7_53_R3
G..1...12.3.023.22.22.2.2..22..2...2222.222.2.2.22.
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G..2...02.2.232.22.11.2.2..12..1...2222.222.2.3.22.
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G..3...22.2.032.13.22.2.1..23..0...2130.132.1.2.30.
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G..2...21.2.200.21.30.1.1..30..0...2112.202.2.0.22.
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G..2...13.1.112.22.00.0.0..02..2...2222.200.2.2.22.
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G..1...12.2.212.20.11.2.1..12..2...1311.223.1.3.21.
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G..1...21.2.212.02.01.2.1..21..3...2210.113.2.3.32.
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G..1...01.2.202.10.11.0.2..22..2...0332.111.2.0.22.
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G..2...31.2.211.11.31.2.0..31..0...2030.312.1.0.22.
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G..2...00.0.002.31.23.0.2..32..3...1032.120.2.1.22.
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G..1...00.1.002.02.12.1.2..22..2...1020.312.2.0.21.
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G..2...33.0.233.03.31.0.1..13..2...0020.222.2.2.22.
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G..2...03.2.112.23.31.1.2..21..1...2221.322.2.1.21.
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G..3...02.2.221.22.12.1.2..13..0...0033.230.2.3.21.
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G..0...23.2.030.01.02.0.3..33..3...2101.030.0.2.20.
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G..3...01.0.011.10.21.0.3..22..0...2101.020.3.0.01.
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G..3...33.3.113.10.20.1.1..02..2...3132.200.1.1.21.
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G..0...30.0.300.12.30.1.1..30..2...1022.320.3.3.33.
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G..3...22.1.110.22.31.2.2..21..1...1021.330.1.2.31.
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G..0...00.3.200.02.30.0.1..20..1...0003.301.2.2.33.
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G..3...00.0.201.11.03.2.3..30..2...1112.300.2.2.31.
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G..2...11.1.232.31.01.2.1..22..1...2222.122.2.1.22.
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G..3...23.0.310.12.22.2.2..22..2...3232.303.2.2.33.
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G..3...21.0.012.11.00.1.2..31..0...0101.022.2.3.03.
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G..2...02.1.333.11.10.2.2..21..3...1323.011.1.2.22.
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G..1...22.3.333.22.22.3.1..12..2...2122.332.1.3.21.
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G..2...22.2.332.12.01.3.0..21..2...0312.122.0.1.02.
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G..1...11.0.223.12.23.2.0..11..1...2012.132.0.3.30.
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G..3...02.1.133.00.21.1.3..20..1...3000.002.3.2.23.
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G..3...21.2.121.00.13.0.3..01..3...1131.330.1.3.01.
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G..0...12.3.202.00.03.2.0..22..0...2112.021.2.3.22.
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G..1...20.0.021.12.10.2.0..20..1...2002.012.2.1.22.
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G..0...11.0.212.11.00.2.0..23..1...2002.102.1.0.30.
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G..3...20.3.020.23.22.2.2..22..1...3302.132.0.2.02.
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G..3...12.2.013.21.20.2.1..21..2...2001.123.0.2.12.
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G..0...11.1.233.22.22.1.3..22..2...3311.220.1.2.11.
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G..0...10.1.033.00.33.2.1..11..3...0031.333.0.3.32.
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G..3...00.2.102.11.21.2.1..00..0...0011.000.2.0.00.
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G..3...03.3.203.10.12.0.2..20..2...1113.121.2.1.33.
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G..2...13.3.311.21.13.1.0..11..3...0212.001.0.2.22.
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G..2...02.0.222.13.22.0.1..11..1...1220.213.0.1.20.
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G..3...11.3.213.13.02.1.3..20..1...3031.033.2.1.03.
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G..0...33.0.231.21.10.0.0..03..1...1323.110.0.2.01.
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G..2...33.1.320.12.01.2.0..11..3...1213.332.1.3.20.
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G..3...03.1.331.22.00.2.0..22..2...0120.020.1.2.02.
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G.312..02.1.302.20.00.0.0..33..2...3313.22022.3.20.
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G.123..02.3.222.22.22.2.2..22..2...2222.32222.2.22.
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G.023..30.1.103.10.12.2.1..31..0...1332.10222.0.22.
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G.202..31.0.331.13.02.2.1..23..2...2220.03103.3.33.
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G.123..10.0.032.22.10.3.0..03..3...0300.32013.0.20.
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G.333..20.3.233.21.22.2.2..20..2...0301.23003.3.23.
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G.321..32.1.231.20.12.2.3..31..2...2021.32202.2.22.
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G.020..01.0.313.03.03.2.2..11..2...2011.20122.2.00.
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G.023..00.1.000.20.03.0.3..01..0...0333.33320.0.01.
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G.001..13.0.123.11.33.3.0..00..2...3223.32232.1.01.
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G.300..33.3.100.13.20.3.2..32..2...3331.13321.3.23.
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G.302..33.2.010.11.12.3.1..23..3...1303.03112.1.22.
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G.010..10.1.212.02.12.1.0..20..3...3223.01201.0.02.
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G.002..03.3.313.13.03.2.2..03..2...11.0.33210.0.12.
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G.222..22.2.222.12.22.2.22.22..2..22222222222.2.22.
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G.200..02.2.120.22.32.0.11.32..3..12222222222.2.21.
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G1322..3022.223.01.30.3010.300.0.21210001322111.00.
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G0320..3022.211.20.32.3322.132.0.12230210121023.32.
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G2320..1001.132.20.31.1130.200.2.00313111310201.30.
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G0102..3213.300.13.20.1230.012.2.21201101201101.11.
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G1312..0311.200.20.33.3031.202.2.13220211222312.31.
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G1113..0132.002.12.12.1211.021.2.01030131101300.00.
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G1112..3021.113.13.32.1222.021.0.03221230110030.12.
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G2123..3021.210.01.21.1030.320.0.33011200122002.20.
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G0220..0123.030.02.00.1202.212.1.12112113231030.30.
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G3100..3303.021.32.11.2033.010.0.11002211020233.11.
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G2122..2221.330.21.13.2201.223.1.11031233222013.11.
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G1101..0201.230.21.11.0211.011.2.21133221120011.31.
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G0132..0333.322.03.10.0333.031.3.31131021200322.31.
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G2232..3003.321.33.21.1213.220.2.32102202110203.11.
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G0012..2010.013.02.33.3100.023.3111210132310000.01.
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G0113..2012.323.11.31.1013.100.3233000022131322.23.
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G2222..0003.001.31.03.2321.212.2112303213222233.10.
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G1112..0102.012.31.22.3311.302.2013011120011100.11.
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G3120..1223.211.31.30.0222.121.2023113003020123.22.
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G3100..1233.212.03.30.0222.222.2223112033122230.23.
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G2032..1111.323.03.33.1122.333.3320023310033303.22.
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G3122..0121.311.32.22.1011.211.3212001211320020.21.
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G0111..1113.233.33.11.1122.333.3220333130032133.30.
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G0223..0211.202.33.01.0331.221.2022301102302130.33.
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G0120..2001.223.01.33.1110.223.1211113322312120.23.
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G2012..0303.013.23.02.0003.213.0221333022021233.21.
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G3220..0003.031.10.21.3331.103.1200000200020000.20.
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G0211..2113.103.01.33.0213.131.1131210030013322.02.
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G0300..2310.200.13.03.0001.002.0010100110000221.31.
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G1330..2233.002.20.20.2202.133.2200021211220113.12.
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G0103..2222.022.01.02.0333.321.0021301000320100.32.
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G1132..3202.000.12.31.1102.233.2222333002211003.13.
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G1003..0002.002.20.02.3012.111.3122000230000220.22.
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G0022..1221.311.20.00.0113.110.3001010121111120.12.
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G2222..2211.213.21.31.0330.000.2123203002130221.32.
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G0010..1121.112.21.03.1232.112.2020222301113102.20.
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G0230..1300.302.13.20.3301.001.1120323133133333.03.
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G1222..0003.000.32.11.1222.221.1210032122020030.00.
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G0222..3011.012.30.22.1103.110.3002200100201001.03.
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G0222..3110.331.21.22.2200.002.1300220220120202.02.
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G2220..3112.323.22.03.0233.200.2303221232100030.23.
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G2031..2313.121.13.03.2221.133.2023021131323031.30.
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G0031..2120.300.12.12.0002.301.3120030202312122.21.
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G2102..1001.321.20.10.3320.321.2211211101200321.12.
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G0002..3001.230.01.20.0231.002.1201113121120001.31.
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G2112..0210.212.32.13.3112.120.3320203131230023.00.
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G2131..0110.331.01.11.1331.123.3323103221332231.11.
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G2212..1122.321.32.12.2222.222.2221222222222222.22.
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G0002..1032.201.31.12.2222.023.2222321221222211.22.
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G1222..0202.222.02.22.0112.203.3022020223320130.01.
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G1000..3303.012.00.10.1330.230.1130120322111230.22.
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G0023..0033.320.22.11.1000.113.3012120222222222.22.
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G0221..1223.122.23.21.3212.222.2222223222302322.22.
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G2313..3001.121.12.21.3131.113.3333033333033111.32.
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G0022..1212.320.20.21.0321.211.2221121222221220.31.
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G2220..2012.210.10.23.1320.033.2200330301303233.30.
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G3322..1201.302.30.31.2220.323.3120021003322223.20.
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G1003..3000.300.02.00.1031.101.0000030003310030.01.
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G1003..1112.300.21.21.3033.033.1310310030223301.12.
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G2121..2130.122.13.03.1213.213.3203011112122011.33.
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G0222..2212.000.11.32.2310.033.2010101230012130.21.
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G3132..0121.311.02.13.3012.302.1113200103012221.12.
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G3130..2231.130.11.32.0000.002.1130332001003101.32.
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G1330..0303.013.32.31.0102.120.0122011112122321.03.
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G2313..1101.211.13.33.1021.232.2222212122311133.21.
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G1030..1000.311.20.11.2301.310.1201113132331121.12.
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G0101..1330.232.02.00.1100.101.2013133213103321.23.
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G0231..0300.303.03.00.1013.132.1322212323121333.23.
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G2123..1133.031.00.23.0212.033.1300001310200300.33.
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G3313..2033.201.23.00.1111.120.0322310111121220.22.
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G0000..1111.011.02.21.0111.301.3310230303100110.13.
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G2131..0221.102.21.22.3102.213.1120211103300110.12.
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G0022..0211.010.21.03.1321.102.2020222023112220.22.
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G2300..3303.020.11.13.2001.010.0012022112202122.11.
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G1012..0221.030.13.01.0100.112.0102100222022222.22.
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G3011..0111.022.22.01.0232.021.3211120120120110.03.
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G3132..0213.321.13.32.3122.123.1021002130301210.23.
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G3233..2202.022.00.01.2101.020.2312112223233330.10.
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G3010..2002.023.21.2213211.120.1200222222231222.222
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G2223..1023.130.20.1212101.112.1021211212022221.221