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/test-data/rr.csfasta

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 1001 lines | 1001 code | 0 blank | 0 comment | 0 complexity | e23eb587793c3281f6335fdc9e7347c1 MD5 | raw file
   1# Mon Sep 28 22:46:46 2009 /share/apps/corona/bin/filter_fasta.pl --output=/data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/results.01/primary.20090929010043704 --name=solid176_20090923_Somali_Wild_Ass_a --tag=R3 --minlength=50 --mincalls=25 --prefix=G /data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/jobs/postPrimerSetPrimary.849/rawseq 
   2# Cwd: /state/partition1/home/pipeline
   3# Title: solid176_20090923_Somali_Wild_Ass_a
   4>853_7_53_R3
   5G..1...12.3.023.22.22.2.2..22..2...2222.222.2.2.22.
   6>853_7_78_R3
   7G..2...02.2.232.22.11.2.2..12..1...2222.222.2.3.22.
   8>853_7_88_R3
   9G..3...22.2.032.13.22.2.1..23..0...2130.132.1.2.30.
  10>853_7_132_R3
  11G..2...21.2.200.21.30.1.1..30..0...2112.202.2.0.22.
  12>853_7_141_R3
  13G..2...13.1.112.22.00.0.0..02..2...2222.200.2.2.22.
  14>853_7_146_R3
  15G..1...12.2.212.20.11.2.1..12..2...1311.223.1.3.21.
  16>853_7_269_R3
  17G..1...21.2.212.02.01.2.1..21..3...2210.113.2.3.32.
  18>853_7_321_R3
  19G..1...01.2.202.10.11.0.2..22..2...0332.111.2.0.22.
  20>853_7_386_R3
  21G..2...31.2.211.11.31.2.0..31..0...2030.312.1.0.22.
  22>853_7_405_R3
  23G..2...00.0.002.31.23.0.2..32..3...1032.120.2.1.22.
  24>853_7_411_R3
  25G..1...00.1.002.02.12.1.2..22..2...1020.312.2.0.21.
  26>853_7_445_R3
  27G..2...33.0.233.03.31.0.1..13..2...0020.222.2.2.22.
  28>853_7_469_R3
  29G..1...10.3.313.33.33.0.3..02..1...2333.230.2.3.32.
  30>853_7_474_R3
  31G..2...03.2.112.23.31.1.2..21..1...2221.322.2.1.21.
  32>853_7_497_R3
  33G..3...02.2.221.22.12.1.2..13..0...0033.230.2.3.21.
  34>853_7_587_R3
  35G..0...23.2.030.01.02.0.3..33..3...2101.030.0.2.20.
  36>853_7_630_R3
  37G..3...01.0.011.10.21.0.3..22..0...2101.020.3.0.01.
  38>853_7_655_R3
  39G..3...33.3.113.10.20.1.1..02..2...3132.200.1.1.21.
  40>853_7_692_R3
  41G..0...30.0.300.12.30.1.1..30..2...1022.320.3.3.33.
  42>853_7_715_R3
  43G..3...22.1.110.22.31.2.2..21..1...1021.330.1.2.31.
  44>853_7_719_R3
  45G..0...00.3.200.02.30.0.1..20..1...0003.301.2.2.33.
  46>853_7_743_R3
  47G..3...00.0.201.11.03.2.3..30..2...1112.300.2.2.31.
  48>853_7_791_R3
  49G..1...00.2.022.02.32.1.3..21..0...0222.120.1.0.22.
  50>853_7_801_R3
  51G..2...11.1.232.31.01.2.1..22..1...2222.122.2.1.22.
  52>853_7_845_R3
  53G..3...23.0.310.12.22.2.2..22..2...3232.303.2.2.33.
  54>853_7_868_R3
  55G..3...21.0.012.11.00.1.2..31..0...0101.022.2.3.03.
  56>853_7_1026_R3
  57G..2...02.1.333.11.10.2.2..21..3...1323.011.1.2.22.
  58>853_7_1057_R3
  59G..1...22.3.333.22.22.3.1..12..2...2122.332.1.3.21.
  60>853_7_1066_R3
  61G..2...22.2.332.12.01.3.0..21..2...0312.122.0.1.02.
  62>853_7_1107_R3
  63G..1...11.0.223.12.23.2.0..11..1...2012.132.0.3.30.
  64>853_7_1179_R3
  65G..3...02.1.133.00.21.1.3..20..1...3000.002.3.2.23.
  66>853_7_1198_R3
  67G..3...21.2.121.00.13.0.3..01..3...1131.330.1.3.01.
  68>853_7_1261_R3
  69G..0...12.3.202.00.03.2.0..22..0...2112.021.2.3.22.
  70>853_7_1321_R3
  71G..1...20.0.021.12.10.2.0..20..1...2002.012.2.1.22.
  72>853_7_1406_R3
  73G..0...11.0.212.11.00.2.0..23..1...2002.102.1.0.30.
  74>853_7_1431_R3
  75G..3...20.3.020.23.22.2.2..22..1...3302.132.0.2.02.
  76>853_7_1439_R3
  77G..3...12.2.013.21.20.2.1..21..2...2001.123.0.2.12.
  78>853_7_1524_R3
  79G..1...22.3.122.01.11.2.3..20..1...3021.103.2.0.32.
  80>853_7_1537_R3
  81G..0...11.1.233.22.22.1.3..22..2...3311.220.1.2.11.
  82>853_7_1592_R3
  83G..0...10.1.033.00.33.2.1..11..3...0031.333.0.3.32.
  84>853_7_1597_R3
  85G..3...00.2.102.11.21.2.1..00..0...0011.000.2.0.00.
  86>853_7_1650_R3
  87G..3...03.3.203.10.12.0.2..20..2...1113.121.2.1.33.
  88>853_7_1790_R3
  89G..2...13.3.311.21.13.1.0..11..3...0212.001.0.2.22.
  90>853_7_1795_R3
  91G..2...02.0.222.13.22.0.1..11..1...1220.213.0.1.20.
  92>853_7_1807_R3
  93G..3...11.3.213.13.02.1.3..20..1...3031.033.2.1.03.
  94>853_7_1872_R3
  95G..0...33.0.231.21.10.0.0..03..1...1323.110.0.2.01.
  96>853_7_1885_R3
  97G..2...33.1.320.12.01.2.0..11..3...1213.332.1.3.20.
  98>853_7_1910_R3
  99G..3...03.1.331.22.00.2.0..22..2...0120.020.1.2.02.
 100>853_8_43_R3
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 102>853_8_48_R3
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 104>853_8_57_R3
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 106>853_8_106_R3
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 108>853_8_196_R3
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 110>853_8_211_R3
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 112>853_8_227_R3
 113G.221..02.1.031.02.32.1.0..21..3...2212.30100.2.22.
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 116>853_8_253_R3
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 118>853_8_342_R3
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 120>853_8_400_R3
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 122>853_8_422_R3
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 124>853_8_555_R3
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 126>853_8_638_R3
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 128>853_8_735_R3
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 130>853_8_888_R3
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 132>853_8_893_R3
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 134>853_8_898_R3
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 136>853_8_920_R3
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 138>853_8_958_R3
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 140>853_8_1076_R3
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 142>853_8_1081_R3
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 146>853_8_1157_R3
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 148>853_8_1173_R3
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 150>853_8_1215_R3
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 152>853_8_1223_R3
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 154>853_8_1229_R3
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 156>853_8_1234_R3
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 158>853_8_1255_R3
 159G.321..32.1.231.20.12.2.3..31..2...2021.32202.2.22.
 160>853_8_1315_R3
 161G.122..13.1.232.30.31.0.3..02..2...2300.23122.2.23.
 162>853_8_1372_R3
 163G.020..01.0.313.03.03.2.2..11..2...2011.20122.2.00.
 164>853_8_1461_R3
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 166>853_8_1475_R3
 167G.031..13.1.301.11.00.1.0..22..2...1200.02001.0.00.
 168>853_8_1567_R3
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 170>853_8_1662_R3
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 172>853_8_1669_R3
 173G.023..00.1.000.20.03.0.3..01..0...0333.33320.0.01.
 174>853_8_1758_R3
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 176>853_8_1764_R3
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 178>853_8_1824_R3
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 180>853_8_1835_R3
 181G.211..22.2.310.12.02.2.0..22..1...2222.12220.2.11.
 182>853_8_1917_R3
 183G.011..03.2.233.33.32.2.2..22..3...1311.22132.2.02.
 184>853_8_1930_R3
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 186>853_8_1938_R3
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 188>853_8_1984_R3
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 190>853_8_2005_R3
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 192>853_8_2031_R3
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 194>853_9_6_R3
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 196>853_9_22_R3
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 198>853_9_70_R3
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 200>853_9_120_R3
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 202>853_9_156_R3
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 204>853_9_189_R3
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 206>853_9_243_R3
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 208>853_9_295_R3
 209G.200..02.2.120.22.32.0.11.32..3..12222222222.2.21.
 210>853_9_299_R3
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 212>853_9_311_R3
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 214>853_9_326_R3
 215G.330..21.1.121.11.30.2.01.21..1..21021311332.3.33.
 216>853_9_451_R3
 217G.203..01.1.003.33.30.2.20.20..2..33103102231.2.00.
 218>853_9_485_R3
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 220>853_9_509_R3
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 222>853_9_538_R3
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 224>853_9_548_R3
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 226>853_9_574_R3
 227G.031..33.3.332.31.00.0.00.00..0..01003032220.3.10.
 228>853_9_589_R3
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 230>853_9_595_R3
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 232>853_9_750_R3
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 234>853_9_783_R3
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 236>853_9_814_R3
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 238>853_9_924_R3
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 240>853_9_1019_R3
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 242>853_9_1046_R3
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 244>853_9_1126_R3
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 246>853_9_1192_R3
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 248>853_9_1243_R3
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 250>853_9_1272_R3
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 252>853_9_1339_R3
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 254>853_9_1358_R3
 255G.201..30.1.000.30.12.2.00.11..3..10202103212.2.22.
 256>853_9_1364_R3
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 258>853_9_1397_R3
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 260>853_9_1425_R3
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 262>853_9_1446_R3
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 264>853_9_1479_R3
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 266>853_9_1503_R3
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 268>853_9_1512_R3
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 270>853_9_1530_R3
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 272>853_9_1559_R3
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 274>853_9_1601_R3
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 276>853_9_1636_R3
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 278>853_9_1657_R3
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 280>853_9_1675_R3
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 282>853_9_1709_R3
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 284>853_9_1722_R3
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 286>853_9_1728_R3
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 292>853_9_1923_R3
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