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/test-data/customTrack2.bed

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 349 lines | 349 code | 0 blank | 0 comment | 0 complexity | d4e0e4098edfa9907b0e5f3064200c41 MD5 | raw file
  1chr2	36124	36160	GC_rich	29	+
  2chr2	36572	36711	(CCCCG)n	247	+
  3chr2	36610	36800	C-rich	392	+
  4chr2	37778	37853	GA-rich	206	+
  5chr2	38158	39025	L1PA10	6050	+
  6chr2	39034	39201	L1M4c	431	-
  7chr2	39235	39279	MIR	201	+
  8chr2	39436	40499	L1PA16	5353	+
  9chr2	40733	40949	L1M5	321	+
 10chr2	41007	41090	Charlie1	360	+
 11chr2	41090	41137	LTR45	532	-
 12chr2	41137	41554	MSTB	2312	+
 13chr2	41554	41696	LTR45B	626	-
 14chr2	41651	41716	MER5A1	236	-
 15chr2	41739	41815	LTR45	469	-
 16chr2	41852	41969	Charlie1	236	+
 17chr2	41987	42034	FLAM_C	702	+
 18chr2	42034	42445	MSTA	2481	+
 19chr2	42445	42548	FLAM_C	702	+
 20chr2	42565	42681	Charlie1	470	+
 21chr2	42761	42807	L2	185	-
 22chr2	42835	43469	L1M5	903	+
 23chr2	43469	43551	AluJ/FLAM	508	+
 24chr2	43626	43721	MER33	393	+
 25chr2	43770	43929	L1M5	262	+
 26chr2	44897	45496	LTR71B	1895	-
 27chr2	45970	46426	L1M2b	1705	+
 28chr2	46426	46670	THE1B	1704	-
 29chr2	46744	46941	MER52D	245	+
 30chr2	47216	47483	MER52D	1052	+
 31chr2	47484	48495	MER52D	4223	+
 32chr2	48495	49053	MER52-int	3942	+
 33chr2	49172	49903	MER52-int	5089	+
 34chr2	49932	50066	THE1B	735	-
 35chr2	50070	51136	L1M2b	3786	+
 36chr2	51136	51399	AluY	2214	+
 37chr2	51399	51727	L1M2b	3786	+
 38chr2	51719	52002	L1MA5	1983	+
 39chr2	52002	52275	AluJb	1906	+
 40chr2	52289	52336	(TAAA)n	423	+
 41chr2	52336	52400	L1MA5	1983	+
 42chr2	52400	52625	AluSq	1665	+
 43chr2	52625	52683	L1MA5	1983	+
 44chr2	52709	52837	FLAM_C	734	-
 45chr2	54453	54517	MER94	494	+
 46chr2	54517	54809	AluSx	2081	-
 47chr2	54809	54860	MER94	494	+
 48chr2	54866	54998	MIR3	332	+
 49chr2	59062	59093	AT_rich	31	+
 50chr2	60498	60560	MIRb	192	+
 51chr2	61205	61717	MLT1H	754	+
 52chr2	62079	62552	MLT1D	2121	+
 53chr2	62909	63061	MER67A	375	+
 54chr2	63742	64034	AluSx	1506	-
 55chr2	64185	64306	MLT1H	280	-
 56chr2	64641	65101	MER4A1	3135	+
 57chr2	66342	66707	THE1B	2550	-
 58chr2	66707	68238	MLT1H-int	3238	-
 59chr2	68240	68605	THE1B	2399	-
 60chr2	69792	69907	MIRb	240	+
 61chr2	69909	70264	MER4A1	2647	-
 62chr2	70452	70639	MIR	228	+
 63chr2	70876	71234	MLT1J1	575	-
 64chr2	72494	72620	L1ME3B	400	-
 65chr2	72645	73168	MER90a	2062	-
 66chr2	74780	74914	MIRb	213	+
 67chr2	74983	75046	MIR3	180	+
 68chr2	75251	75291	MIRm	198	-
 69chr2	75313	75430	MIRb	215	-
 70chr2	75652	75823	MIRb	225	+
 71chr2	77049	77357	AluJo	1747	+
 72chr2	77438	77474	AT_rich	22	+
 73chr2	77475	77811	L1MC4	683	-
 74chr2	77813	78125	L1MC4a	1528	-
 75chr2	78125	78408	AluJo	1550	+
 76chr2	78408	78515	L1MC4a	1528	-
 77chr2	78515	78553	(CA)n	342	+
 78chr2	78553	78726	L1MC4a	1528	-
 79chr2	79305	79613	L1MC4	506	+
 80chr2	80122	80210	L1MC4	231	+
 81chr2	80251	80559	L1MC	1036	+
 82chr2	80569	80809	L1PA7	11967	+
 83chr2	80809	82246	LTR12C	9549	+
 84chr2	82246	84045	L1PA7	11967	+
 85chr2	84045	85055	LTR5A	8123	+
 86chr2	85055	89392	L1PA7	20590	+
 87chr2	89556	89820	AluY	1994	+
 88chr2	90168	90462	L2	554	-
 89chr2	90462	90717	AluSx	1621	+
 90chr2	90717	90841	L2	554	-
 91chr2	91794	91832	AT_rich	24	+
 92chr2	92171	92375	MIRb	363	+
 93chr2	92468	93502	L1MA4A	4118	-
 94chr2	93497	96075	L1MA4A	11775	-
 95chr2	96408	97310	L1MA4A	9242	-
 96chr2	97310	97600	AluSx	2107	-
 97chr2	97600	99410	L1MA4A	9242	-
 98chr2	99671	99720	(GGAA)n	317	+
 99chr2	100500	100526	AT_rich	26	+
100chr2	100790	100850	L1M5	226	+
101chr2	101493	101736	MIRb	664	-
102chr2	102084	102384	AluSx	2334	-
103chr2	103029	103104	L2	287	+
104chr2	103525	103696	L3	282	-
105chr2	103888	104191	AluSx	2269	+
106chr2	104206	104332	L2	292	+
107chr2	104498	104580	MIRb	248	-
108chr2	105772	105883	L2	270	+
109chr2	106293	106594	AluSc	2269	+
110chr2	106705	107055	L2	539	-
111chr2	107056	107905	MER45B	3388	-
112chr2	107963	108173	Charlie4a	1340	+
113chr2	108173	108471	AluSg	2024	+
114chr2	108471	108687	Charlie4a	1340	+
115chr2	108706	109100	L2	906	-
116chr2	109366	109439	HAL1	264	-
117chr2	109439	109730	AluSx	1921	+
118chr2	109730	109812	HAL1	264	-
119chr2	110514	110571	MER5B	225	+
120chr2	111186	111304	MER94	459	+
121chr2	111642	111836	MIR	654	-
122chr2	111936	112346	L2	309	-
123chr2	112452	112477	(TGAA)n	225	+
124chr2	112938	113010	MIRb	180	+
125chr2	115295	115402	MIR	343	+
126chr2	115424	115551	MIR	412	-
127chr2	116167	117645	SVA	11488	+
128chr2	117805	118013	MIRb	306	-
129chr2	118824	119831	L1PB	5354	-
130chr2	120000	120038	(TAAA)n	197	+
131chr2	120670	120807	MER5B	553	+
132chr2	120921	121233	AluJo	1929	-
133chr2	122648	122930	AluSp	2141	+
134chr2	123099	123410	AluJb	1619	+
135chr2	123519	123681	L1ME3A	325	+
136chr2	123710	123775	LTR43	242	-
137chr2	123841	124183	LTR43B	1146	-
138chr2	124264	124603	L1ME3A	939	+
139chr2	125097	125705	L1MC1	3512	+
140chr2	125706	126048	MSTA	2544	+
141chr2	126048	126347	AluSx	1849	+
142chr2	126347	126409	MSTA	2544	+
143chr2	127755	128321	L1MA9	2460	-
144chr2	128314	128822	L1MA9	1912	+
145chr2	128822	128844	AT_rich	22	+
146chr2	128906	129305	MLT1A1	1893	+
147chr2	131614	132043	MSTA	2057	-
148chr2	132398	132645	AluY	1947	+
149chr2	133039	133106	AT_rich	32	+
150chr2	133111	133341	PABL_A	1802	-
151chr2	133341	134756	PABL_A-int	10971	-
152chr2	135007	135054	L2	184	-
153chr2	135074	135147	L2	249	+
154chr2	135270	135471	L1MEb	333	-
155chr2	135510	135690	Tigger1	669	+
156chr2	135672	135884	Tigger1	1251	+
157chr2	135884	135947	L1M2	8741	-
158chr2	135947	136253	AluSp	2298	-
159chr2	136253	136888	L1M2	8741	-
160chr2	136888	136922	(TTTA)n	224	+
161chr2	136922	137816	L1M2	8741	-
162chr2	137816	138169	THE1B	2055	-
163chr2	138169	138639	L1M2	8741	-
164chr2	138641	139121	MER44C	2479	+
165chr2	139144	139808	MER4A	2394	+
166chr2	139810	140042	MER44C	1272	+
167chr2	140046	140215	L1M2	664	-
168chr2	140215	140675	MER4A1	3468	+
169chr2	140675	140763	L1M2	664	-
170chr2	141552	142024	L1MEb	591	-
171chr2	142058	142213	MER51A	538	+
172chr2	142215	142519	MER51B	1633	+
173chr2	142638	142787	HAL1b	319	-
174chr2	143395	143564	LTR17	1225	-
175chr2	143580	143698	AluY	902	+
176chr2	143698	144298	LTR17	4934	-
177chr2	144298	144589	HERV17	2415	-
178chr2	144579	144620	HERV17	305	-
179chr2	144612	148188	HERV17	30373	-
180chr2	148187	150021	HERV17	13802	-
181chr2	150021	150782	LTR17	6037	-
182chr2	151296	151390	L2	190	-
183chr2	152021	152314	AluJb	1532	+
184chr2	153860	154064	L3	484	+
185chr2	154147	155500	L1PA7	7363	+
186chr2	155550	155627	L4	184	+
187chr2	156586	156729	MIRb	240	+
188chr2	157888	159232	L1MC2	4364	+
189chr2	159933	160007	MIR3	196	+
190chr2	160097	160129	AT_rich	32	+
191chr2	160901	160950	(CA)n	378	+
192chr2	161462	161773	AluY	2636	+
193chr2	161926	162002	Kanga1	233	-
194chr2	164118	164211	HAL1	264	+
195chr2	164330	164435	(CATATA)n	450	+
196chr2	164435	164679	AluSx	1559	-
197chr2	164780	164802	AT_rich	22	+
198chr2	164931	165118	MIRb	183	-
199chr2	167243	167542	AluSx	1867	+
200chr2	168414	168510	L1PB1	3181	+
201chr2	168510	168537	(TA)n	182	+
202chr2	168537	168572	(CA)n	324	+
203chr2	168572	168923	L1PB1	3181	+
204chr2	169914	170344	LTR35-int	677	+
205chr2	170349	170763	LTR35-int	1559	+
206chr2	170771	170917	L1PA4	1004	+
207chr2	170998	172290	LTR57-int	5968	+
208chr2	171342	173675	LOR1-int	6255	+
209chr2	173750	173972	LOR1-int	625	+
210chr2	174098	174198	LTR49-int	367	+
211chr2	174202	174392	LOR1-int	1108	+
212chr2	174395	174681	MER49	4056	+
213chr2	174681	175052	THE1C	2588	+
214chr2	175052	175497	MER49	4056	+
215chr2	175684	176055	LOR1-int	351	+
216chr2	176246	176698	LTR35	736	+
217chr2	176818	176841	AT_rich	23	+
218chr2	176990	177493	MLT1F2	1583	+
219chr2	177497	177522	(CAAAAA)n	225	+
220chr2	177538	177765	L1MC4	481	+
221chr2	177880	178397	LTR22C	2762	-
222chr2	178522	178630	AluJb	728	+
223chr2	178895	178998	L1M5	261	+
224chr2	179170	179198	AT_rich	21	+
225chr2	179978	180161	MER20	331	+
226chr2	180330	180509	L1MB2	1075	+
227chr2	180509	181898	LTR12C	8168	-
228chr2	181898	181924	L1MB2	1075	+
229chr2	181903	182185	L1MB2	1132	+
230chr2	182394	182433	(T)n	246	+
231chr2	182441	182653	AluSg	1644	-
232chr2	185331	185446	L1M4	246	-
233chr2	185937	186497	MER92B	900	-
234chr2	189807	189920	L2	242	+
235chr2	190069	190208	L2	229	-
236chr2	190610	190778	MIR	271	-
237chr2	190936	191064	MIRb	241	+
238chr2	192383	192531	L1MC4a	279	-
239chr2	192614	192967	MSTA	1342	+
240chr2	193615	193737	L1M4	416	-
241chr2	194139	194517	MSTA	2196	+
242chr2	195051	195659	MER4B	3688	+
243chr2	196994	197082	(GGAA)n	1047	+
244chr2	197082	197262	(GGGA)n	1431	+
245chr2	197262	197302	(GGAA)n	1047	+
246chr2	197302	197482	(GGGA)n	1347	+
247chr2	197482	197502	(GGAA)n	1047	+
248chr2	197502	197682	(GGGA)n	1368	+
249chr2	197682	197714	(GGAA)n	1047	+
250chr2	197714	197752	polypurine	219	+
251chr2	198076	198423	MLT1A0	1472	+
252chr2	199454	199677	L2	323	+
253chr2	199741	199990	L2	449	+
254chr2	201304	201337	AT_rich	26	+
255chr2	201543	201737	MIRb	344	-
256chr2	202374	203301	Tigger1	6366	-
257chr2	203546	203694	L1MC2	594	-
258chr2	204844	204905	Alu	426	+
259chr2	204907	205020	L1MD	245	-
260chr2	205310	205354	(CA)n	248	+
261chr2	205572	205611	AT_rich	25	+
262chr2	205757	206463	L1ME1	2227	-
263chr2	206478	206741	L1MA4	1087	-
264chr2	207057	207228	L1M3de	232	-
265chr2	207784	208051	L2	525	-
266chr2	208713	208734	AT_rich	21	+
267chr2	209284	209645	MLT1A0	1607	+
268chr2	210181	210214	(TAA)n	236	+
269chr2	211053	211149	MIR	223	-
270chr2	212441	212529	MER20	473	+
271chr2	213153	213232	MIRb	221	-
272chr2	215176	215279	Charlie2	435	-
273chr2	215309	215572	Charlie2	466	-
274chr2	215762	215892	L1MC4a	248	+
275chr2	216077	216489	L1MC4a	421	+
276chr2	217210	217559	L1MC4a	326	+
277chr2	217567	217588	AT_rich	21	+
278chr2	217889	217910	(TG)n	189	+
279chr2	219447	219753	AluYa5	2878	+
280chr2	220529	220769	AluSx	1445	-
281chr2	221199	221228	AT_rich	22	+
282chr2	221477	221524	(CATATA)n	240	+
283chr2	222442	222742	L1PA6	2387	-
284chr2	222746	222958	L1ME4a	234	+
285chr2	224460	224564	MIRb	253	-
286chr2	224875	225175	AluSq	2314	-
287chr2	226239	226463	MIR	272	+
288chr2	226463	226678	MIR	378	+
289chr2	227578	227831	L1MA4	1053	+
290chr2	228067	228259	LTR52	326	+
291chr2	228259	228303	(TG)n	396	+
292chr2	228303	228355	LTR52	326	+
293chr2	229207	229376	MER105	586	+
294chr2	229713	232723	L1M4b	6457	+
295chr2	232723	232751	(CAA)n	231	+
296chr2	232751	233606	L1M4	3745	+
297chr2	233633	233769	LTR16A1	309	+
298chr2	233780	233825	MIRb	246	+
299chr2	234214	234524	AluY	2373	+
300chr2	234527	234584	(GAAA)n	326	+
301chr2	234597	234715	MIR	217	-
302chr2	235457	235691	MIR	371	-
303chr2	235866	235892	(TAAAAA)n	201	+
304chr2	235913	236224	AluSq	2400	+
305chr2	236591	236642	GA-rich	202	+
306chr2	237758	237789	AT_rich	24	+
307chr2	241682	241737	MER5A	222	-
308chr2	242099	242222	MER5A	250	-
309chr2	243203	243830	MER41B	4374	+
310chr2	244057	244136	AT_rich	44	+
311chr2	244592	245160	MER4A	1940	+
312chr2	245335	245610	AluJo	1518	+
313chr2	246060	246409	L1ME2	2049	-
314chr2	246409	246714	AluSq	2369	+
315chr2	246714	247040	L1ME2	2049	-
316chr2	247032	247373	L1PREC2	1625	-
317chr2	247373	247786	MER57B	2701	+
318chr2	247790	248410	L1PREC2	3920	-
319chr2	248438	249129	L1MEc	575	-
320chr2	249353	249388	AT_rich	28	+
321chr2	249505	249889	L1MC	354	+
322chr2	253987	254010	GC_rich	23	+
323chr2	256504	257206	MER44C	3540	-
324chr2	257237	257619	L2	869	-
325chr2	257626	257758	MER105	414	-
326chr2	257758	258055	MER58B	701	-
327chr2	258065	258208	L2	435	-
328chr2	259635	259758	MER39	618	+
329chr2	259816	260040	MER39	688	+
330chr2	260145	260244	L2	235	+
331chr2	260590	260618	AT_rich	28	+
332chr2	260619	260678	MER21C	340	+
333chr2	260678	260979	MER77	442	+
334chr2	261078	261136	L2	193	+
335chr2	261228	261475	MER8	820	+
336chr2	261491	261567	Charlie9	244	-
337chr2	263033	263317	MSTD	409	-
338chr2	263469	263560	MER58A	287	+
339chr2	263885	264181	AluJo	1552	+
340chr2	265538	265751	MIR	405	-
341chr2	265969	265990	AT_rich	21	+
342chr2	266132	266443	L2	310	+
343chr2	268083	268107	AT_rich	24	+
344chr2	272348	272439	L2	215	+
345chr2	274262	274365	MER5A1	525	-
346chr2	274737	274812	MIR3	296	+
347chr2	275187	275231	MIR	229	+
348chr2	277448	277470	(A)n	198	+
349chr2	277738	277788	GC_rich	36	+