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/test-data/gtf_filter_by_attribute_values_list_in2.gtf

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 100 lines | 100 code | 0 blank | 0 comment | 0 complexity | 78e7767a267367241c727b71e661b791 MD5 | raw file
  1chr19	Cufflinks	exon	22162	22646	.	+	.	gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "1"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
  2chr19	Cufflinks	exon	23171	23274	.	+	.	gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "2"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
  3chr19	Cufflinks	exon	23585	23703	.	+	.	gene_id "XLOC_000001"; transcript_id "TCONS_00000001"; exon_number "3"; oId "uc010drl.1"; class_code "."; tss_id "TSS1";
  4chr19	Cufflinks	exon	58146	58157	.	+	.	gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "1"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
  5chr19	Cufflinks	exon	58473	58555	.	+	.	gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "2"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
  6chr19	Cufflinks	exon	61625	62417	.	+	.	gene_id "XLOC_000002"; transcript_id "TCONS_00000002"; exon_number "3"; oId "uc002lob.1"; class_code "."; tss_id "TSS2";
  7chr19	Cufflinks	exon	61679	62596	.	+	.	gene_id "XLOC_000002"; transcript_id "TCONS_00000003"; exon_number "1"; oId "uc002loc.1"; class_code ".";
  8chr19	Cufflinks	exon	447490	447551	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "1"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
  9chr19	Cufflinks	exon	449496	449825	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "2"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
 10chr19	Cufflinks	exon	455745	456343	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000006"; exon_number "3"; oId "uc010drq.1"; class_code "."; tss_id "TSS3";
 11chr19	Cufflinks	exon	447490	447551	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "1"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
 12chr19	Cufflinks	exon	448833	449117	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "2"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
 13chr19	Cufflinks	exon	449496	449825	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "3"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
 14chr19	Cufflinks	exon	455745	456343	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000005"; exon_number "4"; oId "uc002lot.1"; class_code "."; tss_id "TSS3";
 15chr19	Cufflinks	exon	447490	447551	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "1"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
 16chr19	Cufflinks	exon	448833	449117	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "2"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
 17chr19	Cufflinks	exon	449496	449825	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "3"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
 18chr19	Cufflinks	exon	452669	452929	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "4"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
 19chr19	Cufflinks	exon	455745	456343	.	+	.	gene_id "XLOC_000003"; transcript_id "TCONS_00000004"; exon_number "5"; oId "uc002los.1"; class_code "."; tss_id "TSS3";
 20chr19	Cufflinks	exon	458497	458844	.	+	.	gene_id "XLOC_000004"; transcript_id "TCONS_00000007"; exon_number "1"; oId "uc002lou.1"; class_code "."; tss_id "TSS4";
 21chr19	Cufflinks	exon	469889	470654	.	+	.	gene_id "XLOC_000004"; transcript_id "TCONS_00000007"; exon_number "2"; oId "uc002lou.1"; class_code "."; tss_id "TSS4";
 22chr19	Cufflinks	exon	482733	483108	.	+	.	gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "1"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
 23chr19	Cufflinks	exon	486837	486923	.	+	.	gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "2"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
 24chr19	Cufflinks	exon	487243	487340	.	+	.	gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "3"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
 25chr19	Cufflinks	exon	488013	488147	.	+	.	gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "4"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
 26chr19	Cufflinks	exon	492339	493087	.	+	.	gene_id "XLOC_000005"; transcript_id "TCONS_00000008"; exon_number "5"; oId "uc002lov.1"; class_code "."; tss_id "TSS5";
 27chr19	Cufflinks	exon	495027	495126	.	+	.	gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "1"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
 28chr19	Cufflinks	exon	498280	498436	.	+	.	gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "2"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
 29chr19	Cufflinks	exon	499542	499677	.	+	.	gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "3"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
 30chr19	Cufflinks	exon	499922	500185	.	+	.	gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "4"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
 31chr19	Cufflinks	exon	500630	500919	.	+	.	gene_id "XLOC_000006"; transcript_id "TCONS_00000009"; exon_number "5"; oId "uc002low.1"; class_code "."; tss_id "TSS6";
 32chr19	Cufflinks	exon	522325	522579	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "1"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 33chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "2"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 34chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "3"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 35chr19	Cufflinks	exon	532315	532591	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "4"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 36chr19	Cufflinks	exon	533306	533330	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "5"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 37chr19	Cufflinks	exon	533514	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "6"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 38chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000010"; exon_number "7"; oId "uc002loy.1"; class_code "."; tss_id "TSS7";
 39chr19	Cufflinks	exon	523537	523701	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "1"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 40chr19	Cufflinks	exon	530500	530656	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "2"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 41chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "3"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 42chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "4"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 43chr19	Cufflinks	exon	532315	532581	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "5"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 44chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000014"; exon_number "6"; oId "uc010drr.1"; class_code "."; tss_id "TSS8";
 45chr19	Cufflinks	exon	523537	523701	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "1"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 46chr19	Cufflinks	exon	530500	530656	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "2"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 47chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "3"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 48chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "4"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 49chr19	Cufflinks	exon	532315	532581	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "5"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 50chr19	Cufflinks	exon	533306	533330	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "6"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 51chr19	Cufflinks	exon	533514	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "7"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 52chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000013"; exon_number "8"; oId "uc002lpb.1"; class_code "."; tss_id "TSS8";
 53chr19	Cufflinks	exon	523537	523701	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "1"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 54chr19	Cufflinks	exon	530500	530656	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "2"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 55chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "3"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 56chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "4"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 57chr19	Cufflinks	exon	532315	532591	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "5"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 58chr19	Cufflinks	exon	533306	533330	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "6"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 59chr19	Cufflinks	exon	533514	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "7"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 60chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000012"; exon_number "8"; oId "uc002lpa.1"; class_code "."; tss_id "TSS8";
 61chr19	Cufflinks	exon	523537	523701	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "1"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 62chr19	Cufflinks	exon	528774	529121	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "2"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 63chr19	Cufflinks	exon	530500	530656	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "3"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 64chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "4"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 65chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "5"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 66chr19	Cufflinks	exon	532315	532591	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "6"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 67chr19	Cufflinks	exon	533306	533330	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "7"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 68chr19	Cufflinks	exon	533514	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "8"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 69chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000011"; exon_number "9"; oId "uc002loz.1"; class_code "."; tss_id "TSS8";
 70chr19	Cufflinks	exon	529850	530656	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "1"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 71chr19	Cufflinks	exon	531379	531461	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "2"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 72chr19	Cufflinks	exon	531646	531782	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "3"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 73chr19	Cufflinks	exon	532315	532591	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "4"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 74chr19	Cufflinks	exon	533306	533330	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "5"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 75chr19	Cufflinks	exon	533514	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "6"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 76chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000015"; exon_number "7"; oId "uc002lpc.1"; class_code "."; tss_id "TSS9";
 77chr19	Cufflinks	exon	533496	533582	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000016"; exon_number "1"; oId "uc002lpd.1"; class_code "."; tss_id "TSS10";
 78chr19	Cufflinks	exon	533750	534493	.	+	.	gene_id "XLOC_000007"; transcript_id "TCONS_00000016"; exon_number "2"; oId "uc002lpd.1"; class_code "."; tss_id "TSS10";
 79chr19	Cufflinks	exon	540893	541577	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "1"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 80chr19	Cufflinks	exon	554544	554967	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "2"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 81chr19	Cufflinks	exon	556061	556222	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "3"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 82chr19	Cufflinks	exon	558964	559182	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "4"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 83chr19	Cufflinks	exon	561259	561405	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "5"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 84chr19	Cufflinks	exon	564248	564488	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "6"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 85chr19	Cufflinks	exon	564852	565016	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "7"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 86chr19	Cufflinks	exon	566795	568159	.	+	.	gene_id "XLOC_000008"; transcript_id "TCONS_00000017"; exon_number "8"; oId "uc002lpe.1"; class_code "."; tss_id "TSS11";
 87chr19	Cufflinks	exon	590926	591139	.	+	.	gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "1"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
 88chr19	Cufflinks	exon	594235	594338	.	+	.	gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "2"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
 89chr19	Cufflinks	exon	594410	594604	.	+	.	gene_id "XLOC_000009"; transcript_id "TCONS_00000018"; exon_number "3"; oId "uc002lpg.1"; class_code "."; tss_id "TSS12";
 90chr19	Cufflinks	exon	627389	627526	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "1"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
 91chr19	Cufflinks	exon	628792	628977	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "2"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
 92chr19	Cufflinks	exon	631274	631489	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "3"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
 93chr19	Cufflinks	exon	632333	632560	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "4"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
 94chr19	Cufflinks	exon	632650	634392	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000019"; exon_number "5"; oId "uc002lpk.1"; class_code "."; tss_id "TSS13";
 95chr19	Cufflinks	exon	631715	631879	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "1"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
 96chr19	Cufflinks	exon	632333	632560	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "2"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
 97chr19	Cufflinks	exon	632650	634392	.	+	.	gene_id "XLOC_000010"; transcript_id "TCONS_00000020"; exon_number "3"; oId "uc010drt.1"; class_code "."; tss_id "TSS14";
 98chr19	Cufflinks	exon	659953	660151	.	+	.	gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "1"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";
 99chr19	Cufflinks	exon	677138	677189	.	+	.	gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "2"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";
100chr19	Cufflinks	exon	678008	678088	.	+	.	gene_id "XLOC_000011"; transcript_id "TCONS_00000022"; exon_number "3"; oId "uc002lpn.1"; class_code "."; tss_id "TSS15";