/test-data/emboss_sirna_out.fasta

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 158 lines · 158 code · 0 blank · 0 comment · 0 complexity · 3ffc83920d9ad9e3111368162d45a18a MD5 · raw file 

    

  1. >Sequence_92 %GC 50.0 Score 9 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    2. 

  2. aattgaaagcggttggcctagag
    3. 

  3. >Sequence_53 %GC 45.0 Score 8 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    4. 

  4. aatggctttacaccgactagaaa
    5. 

  5. >Sequence_97 %GC 55.0 Score 8 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    6. 

  6. aaagcggttggcctagagtgtta
    7. 

  7. >Sequence_98 %GC 55.0 Score 8 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    8. 

  8. aagcggttggcctagagtgttac
    9. 

  9. >Sequence_201 %GC 55.0 Score 8 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    10. 

  10. aacaagtacgagtctctcccccc
    11. 

  11. >Sequence_14 %GC 40.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    12. 

  12. aataccttcttttgtccctacac
    13. 

  13. >Sequence_85 %GC 40.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    14. 

  14. aagcactaattgaaagcggttgg
    15. 

  15. >Sequence_181 %GC 40.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    16. 

  16. aagacgttgtggaagaatacaac
    17. 

  17. >Sequence_196 %GC 40.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    18. 

  18. aatacaacaagtacgagtctctc
    19. 

  19. >Sequence_204 %GC 60.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    20. 

  20. aagtacgagtctctcccccctgg
    21. 

  21. >Sequence_252 %GC 60.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    22. 

  22. aatacccttcgcaacaccgcgta
    23. 

  23. >Sequence_264 %GC 40.0 Score 7 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    24. 

  24. aacaccgcgtaactatctatatg
    25. 

  25. >Sequence_38 %GC 45.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    26. 

  26. gaccacagttttcctaatggctt
    27. 

  27. >Sequence_73 %GC 35.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    28. 

  28. aaattcttgtgcaagcactaatt
    29. 

  29. >Sequence_96 %GC 55.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    30. 

  30. gaaagcggttggcctagagtgtt
    31. 

  31. >Sequence_118 %GC 50.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    32. 

  32. taccggtttgtatagctgagcgc
    33. 

  33. >Sequence_200 %GC 50.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    34. 

  34. caacaagtacgagtctctccccc
    35. 

  35. >Sequence_326 %GC 35.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    36. 

  36. aatcttcctttagcaagtctttt
    37. 

  37. >Sequence_364 %GC 35.0 Score 6 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    38. 

  38. aatgttcatgttcttaggttgtt
    39. 

  39. >Sequence_12 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    40. 

  40. aaaataccttcttttgtccctac
    41. 

  41. >Sequence_13 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    42. 

  42. aaataccttcttttgtccctaca
    43. 

  43. >Sequence_16 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    44. 

  44. taccttcttttgtccctacacag
    45. 

  45. >Sequence_32 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    46. 

  46. tacacagaccacagttttcctaa
    47. 

  47. >Sequence_52 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    48. 

  48. taatggctttacaccgactagaa
    49. 

  49. >Sequence_74 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    50. 

  50. aattcttgtgcaagcactaattg
    51. 

  51. >Sequence_88 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    52. 

  52. cactaattgaaagcggttggcct
    53. 

  53. >Sequence_91 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    54. 

  54. taattgaaagcggttggcctaga
    55. 

  55. >Sequence_128 %GC 55.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    56. 

  56. tatagctgagcgcgtctcttgcc
    57. 

  57. >Sequence_173 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    58. 

  58. tactttggaagacgttgtggaag
    59. 

  59. >Sequence_193 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    60. 

  60. aagaatacaacaagtacgagtct
    61. 

  61. >Sequence_198 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    62. 

  62. tacaacaagtacgagtctctccc
    63. 

  63. >Sequence_243 %GC 45.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    64. 

  64. tacagttgtaatacccttcgcaa
    65. 

  65. >Sequence_251 %GC 55.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    66. 

  66. taatacccttcgcaacaccgcgt
    67. 

  67. >Sequence_313 %GC 40.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    68. 

  68. taggttcgtctttaatcttcctt
    69. 

  69. >Sequence_340 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    70. 

  70. aagtcttttactgttttcgacct
    71. 

  71. >Sequence_393 %GC 35.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    72. 

  72. aatatgcggtcagtttaatcttc
    73. 

  73. >Sequence_489 %GC 40.0 Score 5 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    74. 

  74. tactctgtttgtatacagcagtt
    75. 

  75. >Sequence_34 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    76. 

  76. cacagaccacagttttcctaatg
    77. 

  77. >Sequence_36 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    78. 

  78. cagaccacagttttcctaatggc
    79. 

  79. >Sequence_61 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    80. 

  80. tacaccgactagaaattcttgtg
    81. 

  81. >Sequence_63 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    82. 

  82. caccgactagaaattcttgtgca
    83. 

  83. >Sequence_70 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    84. 

  84. tagaaattcttgtgcaagcacta
    85. 

  85. >Sequence_84 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    86. 

  86. caagcactaattgaaagcggttg
    87. 

  87. >Sequence_110 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    88. 

  88. tagagtgttaccggtttgtatag
    89. 

  89. >Sequence_112 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    90. 

  90. gagtgttaccggtttgtatagct
    91. 

  91. >Sequence_135 %GC 60.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    92. 

  92. gagcgcgtctcttgccctgatca
    93. 

  93. >Sequence_180 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    94. 

  94. gaagacgttgtggaagaatacaa
    95. 

  95. >Sequence_183 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    96. 

  96. gacgttgtggaagaatacaacaa
    97. 

  97. >Sequence_203 %GC 60.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    98. 

  98. caagtacgagtctctcccccctg
    99. 

  99. >Sequence_210 %GC 60.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    100. 

  100. gagtctctcccccctggtttgct
    101. 

  101. >Sequence_245 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    102. 

  102. cagttgtaatacccttcgcaaca
    103. 

  103. >Sequence_254 %GC 60.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    104. 

  104. tacccttcgcaacaccgcgtaac
    105. 

  105. >Sequence_263 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    106. 

  106. caacaccgcgtaactatctatat
    107. 

  107. >Sequence_266 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    108. 

  108. caccgcgtaactatctatatgaa
    109. 

  109. >Sequence_348 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    110. 

  110. tactgttttcgacctcaatgttc
    111. 

  111. >Sequence_395 %GC 40.0 Score 4 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    112. 

  112. tatgcggtcagtttaatcttcgt
    113. 

  113. >Sequence_157 %GC 30.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    114. 

  114. aaaggttcattttctctactttg
    115. 

  115. >Sequence_158 %GC 30.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    116. 

  116. aaggttcattttctctactttgg
    117. 

  117. >Sequence_207 %GC 65.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    118. 

  118. tacgagtctctcccccctggttt
    119. 

  119. >Sequence_325 %GC 35.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    120. 

  120. taatcttcctttagcaagtcttt
    121. 

  121. >Sequence_392 %GC 35.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    122. 

  122. taatatgcggtcagtttaatctt
    123. 

  123. >Sequence_409 %GC 30.0 Score 3 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    124. 

  124. aatcttcgttgtttcttcttaaa
    125. 

  125. >Sequence_11 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    126. 

  126. taaaataccttcttttgtcccta
    127. 

  127. >Sequence_41 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    128. 

  128. cacagttttcctaatggctttac
    129. 

  129. >Sequence_43 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    130. 

  130. cagttttcctaatggctttacac
    131. 

  131. >Sequence_67 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    132. 

  132. gactagaaattcttgtgcaagca
    133. 

  133. >Sequence_72 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    134. 

  134. gaaattcttgtgcaagcactaat
    135. 

  135. >Sequence_130 %GC 65.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    136. 

  136. tagctgagcgcgtctcttgccct
    137. 

  137. >Sequence_192 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    138. 

  138. gaagaatacaacaagtacgagtc
    139. 

  139. >Sequence_195 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    140. 

  140. gaatacaacaagtacgagtctct
    141. 

  141. >Sequence_236 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    142. 

  142. tactggatacagttgtaataccc
    143. 

  143. >Sequence_241 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    144. 

  144. gatacagttgtaatacccttcgc
    145. 

  145. >Sequence_304 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    146. 

  146. tatatgtagtaggttcgtcttta
    147. 

  147. >Sequence_306 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    148. 

  148. tatgtagtaggttcgtctttaat
    149. 

  149. >Sequence_310 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    150. 

  150. tagtaggttcgtctttaatcttc
    151. 

  151. >Sequence_358 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    152. 

  152. gacctcaatgttcatgttcttag
    153. 

  153. >Sequence_370 %GC 35.0 Score 2 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    154. 

  154. catgttcttaggttgttttggat
    155. 

  155. >Sequence_156 %GC 30.0 Score 1 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    156. 

  156. caaaggttcattttctctacttt
    157. 

  157. >Sequence_403 %GC 30.0 Score 1 561 BP; 135 A; 106 C; 98 G; 222 T; 0 other;
    158. 

  158. cagtttaatcttcgttgtttctt
    159.