#### /test-data/peakcalling_ccat/3.0/ccat_test_log_out_2.txt

Plain Text | 131 lines | 131 code | 0 blank | 0 comment | 0 complexity | d7e51522988abc3e2e83eadd3af26bc4 MD5 | raw file

1chromosome length information read. chromNum = 49! 2config file read. 3fragmentSize = 200 4isStrandSensitiveMode = 0 5slidingWinSize = 1000 6movingStep = 50 7outputNum = 100000 8minCount = 4 9minScore = 5.000000 10bootstrapPass = 50 11randSeed = 123456 12reading tag files...... 1310000 tags in L1, 10000 tags in L2. 14tag file read. 15pre-processing...... 16pre-processing finished. 17estimating noise rate...... 18not enough reads for noise rate estimation. 19noise rate estimation failed. noise rate set to be 1.0 20noise rate = 1.000000 21peak-finding...... 22chr1......673 candidate peaks. 23chr1_random......0 candidate peaks. 24chr10......0 candidate peaks. 25chr10_random......0 candidate peaks. 26chr11......0 candidate peaks. 27chr11_random......0 candidate peaks. 28chr12......0 candidate peaks. 29chr13......0 candidate peaks. 30chr13_random......0 candidate peaks. 31chr14......0 candidate peaks. 32chr15......0 candidate peaks. 33chr15_random......0 candidate peaks. 34chr16......0 candidate peaks. 35chr16_random......0 candidate peaks. 36chr17......0 candidate peaks. 37chr17_random......0 candidate peaks. 38chr18......0 candidate peaks. 39chr18_random......0 candidate peaks. 40chr19......0 candidate peaks. 41chr19_random......0 candidate peaks. 42chr2......0 candidate peaks. 43chr2_random......0 candidate peaks. 44chr20......0 candidate peaks. 45chr21......0 candidate peaks. 46chr21_random......0 candidate peaks. 47chr22......0 candidate peaks. 48chr22_random......0 candidate peaks. 49chr22_h2_hap1......0 candidate peaks. 50chr3......0 candidate peaks. 51chr3_random......0 candidate peaks. 52chr4......0 candidate peaks. 53chr4_random......0 candidate peaks. 54chr5......0 candidate peaks. 55chr5_random......0 candidate peaks. 56chr5_h2_hap1......0 candidate peaks. 57chr6......0 candidate peaks. 58chr6_random......0 candidate peaks. 59chr6_cox_hap1......0 candidate peaks. 60chr6_qbl_hap2......0 candidate peaks. 61chr7......0 candidate peaks. 62chr7_random......0 candidate peaks. 63chr8......0 candidate peaks. 64chr8_random......0 candidate peaks. 65chr9......0 candidate peaks. 66chr9_random......0 candidate peaks. 67chrM......0 candidate peaks. 68chrX......0 candidate peaks. 69chrX_random......0 candidate peaks. 70chrY......0 candidate peaks. 71peak-finding finished. 72Significance Analysis...... 73estimating paramters...... 74smoothing factor = 0.287387 75estimating local FDR..... 76FDR at the threshold 5.000000 is 0.999000. You may want to adjust the threshold by inspecting the output files. 77post-processing...... 78chr1......finished. 79chr1_random......finished. 80chr10......finished. 81chr10_random......finished. 82chr11......finished. 83chr11_random......finished. 84chr12......finished. 85chr13......finished. 86chr13_random......finished. 87chr14......finished. 88chr15......finished. 89chr15_random......finished. 90chr16......finished. 91chr16_random......finished. 92chr17......finished. 93chr17_random......finished. 94chr18......finished. 95chr18_random......finished. 96chr19......finished. 97chr19_random......finished. 98chr2......finished. 99chr2_random......finished. 100chr20......finished. 101chr21......finished. 102chr21_random......finished. 103chr22......finished. 104chr22_random......finished. 105chr22_h2_hap1......finished. 106chr3......finished. 107chr3_random......finished. 108chr4......finished. 109chr4_random......finished. 110chr5......finished. 111chr5_random......finished. 112chr5_h2_hap1......finished. 113chr6......finished. 114chr6_random......finished. 115chr6_cox_hap1......finished. 116chr6_qbl_hap2......finished. 117chr7......finished. 118chr7_random......finished. 119chr8......finished. 120chr8_random......finished. 121chr9......finished. 122chr9_random......finished. 123chrM......finished. 124chrX......finished. 125chrX_random......finished. 126chrY......finished. 127post-processing finished. 128Significance analysis finished. 129saving results....... 130results saved. 131CCAT process completed!