/test-data/gatk/gatk_variant_eval/gatk_variant_eval_out_1.log.contains
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1HelpFormatter - Program Args: -T VariantEval 2GenomeAnalysisEngine - Strictness is SILENT 3TraversalEngine - Location processed.sites runtime per.1M.sites completed total.runtime remaining 4VariantEvalWalker - Finalizing variant report 5TraversalEngine - Total runtime