/test-data/gatk/gatk_analyze_covariates/gatk_analyze_covariates_out_1.log.contains

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 9 lines · 9 code · 0 blank · 0 comment · 0 complexity · c04053f7f460dd85a3bb8f006e0a042e MD5 · raw file 

    

  1. Program Name: org.broadinstitute.sting.analyzecovariates.AnalyzeCovariates
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  2. Reading in input csv file...
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  3. ...Done!
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  4. Writing out intermediate tables for R...
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  5. Writing out data tables for read group: A Fake phiX Sample	with 340 observations	and aggregate residual error = -9.136
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  6. ...Done!
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  7. Calling analysis R scripts and writing out figures...
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  8. Analyzing read group: A Fake phiX Sample
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  9. ...Done!
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