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  1. <!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
  2. <html xmlns:cis="http://zlab.bu.edu/schema/cisml" xmlns:fimo="http://noble.gs.washington.edu/schema/cisml" xmlns:mem="http://noble.gs.washington.edu/meme">
  3. <head>
  4. <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
  5. <title>FIMO Results</title>
  6. <style type="text/css">
  7. td.left {text-align: left;}
  8. td.right {text-align: right; padding-right: 1cm;}
  9. </style>
  10. </head>
  11. <body bgcolor="#D5F0FF">
  12. <a name="top_buttons"></a><hr>
  13. <table summary="buttons" align="left" cellspacing="0"><tr>
  14. <td bgcolor="#00FFFF"><a href="#database_and_motifs"><b>Database and Motifs</b></a></td>
  15. <td bgcolor="#DDFFDD"><a href="#sec_i"><b>High-scoring Motif Occurences</b></a></td>
  16. <td bgcolor="#DDDDFF"><a href="#debugging_information"><b>Debugging Information</b></a></td>
  17. </tr></table>
  18. <br><br><hr>
  19. <center><big><b>FIMO - Motif search tool</b></big></center>
  20. <hr>
  21. <p>
  22. FIMO version 4.6.0,
  23. (Release date: 8 PST 20)
  24. </p>
  25. <p>
  26. For further information on how to interpret these results
  27. or to get a copy of the FIMO software please access
  28. <a href="http://meme.nbcr.net">http://meme.nbcr.net</a></p>
  29. <hr>
  30. <center><big><b><a name="database_and_motifs">DATABASE AND MOTIFS</a></b></big></center>
  31. <hr>
  32. <div style="padding-left: 0.75in; line-height: 1em; font-family: monospace;">
  33. <p>
  34. DATABASE
  35. /path/to/dataset_?.dat<br>
  36. Database contains
  37. 1
  38. sequences,
  39. 5386
  40. residues
  41. </p>
  42. <p>
  43. MOTIFS
  44. /path/to/dataset_?.dat
  45. (protein)
  46. <table>
  47. <thead><tr>
  48. <th style="border-bottom: 1px dashed;">MOTIF</th>
  49. <th style="border-bottom: 1px dashed; padding-left: 1em;">WIDTH</th>
  50. <th style="border-bottom: 1px dashed; padding-left: 1em;" align="left">
  51. BEST POSSIBLE MATCH
  52. </th>
  53. </tr></thead>
  54. <tbody><tr>
  55. <td align="right">1</td>
  56. <td align="right" style="padding-left: 1em;">11</td>
  57. <td align="left" style="padding-left: 1em;">GGGGTATAAAA</td>
  58. </tr></tbody>
  59. </table></p>
  60. <p>
  61. Random model letter frequencies
  62. (from non-redundant database):
  63. <br>A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058
  64. <br>
  65. L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064
  66. <br>
  67. W 0.013 Y 0.033 </p>
  68. </div>
  69. <hr>
  70. <center><big><b><a name="sec_i">SECTION I: HIGH-SCORING MOTIF OCCURENCES</a></b></big></center>
  71. <hr>
  72. <ul>
  73. <li> Each of the following
  74. 1923
  75. motif occurrences has
  76. p-value less than
  77. 0.0001</li>
  78. <li> The p-value of a motif occurrence is defined as the
  79. probability of a random sequence of the same length as the motif
  80. matching that position of the sequence with as good or better a score.
  81. </li>
  82. <li> The score for the match of a position in a sequence to a motif
  83. is computed by summing the appropriate entries from each column of
  84. the position-dependent scoring matrix that represents the motif.
  85. </li>
  86. <li> The q-value of a motif occurrence is defined as the
  87. false discovery rate if the occurrence is accepted as significant.
  88. </li>
  89. <li>The table is sorted by increasing p-value.</li>
  90. <li>If the start position is larger than the end position,
  91. the motif occurrence is on the reverse strand.
  92. </li>
  93. </ul>
  94. <table border="1">
  95. <thead><tr>
  96. <th>Motif</th>
  97. <th>Sequence Name</th>
  98. <th>Start</th>
  99. <th>End</th>
  100. <th>p-value</th>
  101. <th>q-value</th>
  102. <th>Matched Sequence</th>
  103. </tr></thead>
  104. <tbody>
  105. <tr>
  106. <td align="left"><a name="occurrences_phiX174">1</a></td>
  107. <td align="left">phiX174</td>
  108. <td align="left">1388</td>
  109. <td align="left">1398</td>
  110. <td align="left">6.3e-11</td>
  111. <td align="left">1.22e-09</td>
  112. <td align="left"><code style="font-size: x-large;">AATATCTATAA</code></td>
  113. </tr>
  114. <tr>
  115. <td align="left"><a name="occurrences_phiX174">1</a></td>
  116. <td align="left">phiX174</td>
  117. <td align="left">847</td>
  118. <td align="left">857</td>
  119. <td align="left">6.85e-11</td>
  120. <td align="left">1.22e-09</td>
  121. <td align="left"><code style="font-size: x-large;">AATGTCTAAAG</code></td>
  122. </tr>
  123. <tr>
  124. <td align="left"><a name="occurrences_phiX174">1</a></td>
  125. <td align="left">phiX174</td>
  126. <td align="left">2301</td>
  127. <td align="left">2311</td>
  128. <td align="left">1.09e-10</td>
  129. <td align="left">1.3e-09</td>
  130. <td align="left"><code style="font-size: x-large;">AGGTTATAACG</code></td>
  131. </tr>
  132. <tr>
  133. <td align="left"><a name="occurrences_phiX174">1</a></td>
  134. <td align="left">phiX174</td>
  135. <td align="left">5063</td>
  136. <td align="left">5073</td>
  137. <td align="left">3.01e-10</td>
  138. <td align="left">2.45e-09</td>
  139. <td align="left"><code style="font-size: x-large;">AGGAGCTAAAG</code></td>
  140. </tr>
  141. <tr>
  142. <td align="left"><a name="occurrences_phiX174">1</a></td>
  143. <td align="left">phiX174</td>
  144. <td align="left">989</td>
  145. <td align="left">999</td>
  146. <td align="left">3.42e-10</td>
  147. <td align="left">2.45e-09</td>
  148. <td align="left"><code style="font-size: x-large;">TGAGGATAAAT</code></td>
  149. </tr>
  150. <tr>
  151. <td align="left"><a name="occurrences_phiX174">1</a></td>
  152. <td align="left">phiX174</td>
  153. <td align="left">4713</td>
  154. <td align="left">4723</td>
  155. <td align="left">7.83e-10</td>
  156. <td align="left">3.64e-09</td>
  157. <td align="left"><code style="font-size: x-large;">GACTGCTATCA</code></td>
  158. </tr>
  159. <tr>
  160. <td align="left"><a name="occurrences_phiX174">1</a></td>
  161. <td align="left">phiX174</td>
  162. <td align="left">855</td>
  163. <td align="left">865</td>
  164. <td align="left">8.56e-10</td>
  165. <td align="left">3.64e-09</td>
  166. <td align="left"><code style="font-size: x-large;">AAGGTAAAAAA</code></td>
  167. </tr>
  168. <tr>
  169. <td align="left"><a name="occurrences_phiX174">1</a></td>
  170. <td align="left">phiX174</td>
  171. <td align="left">5048</td>
  172. <td align="left">5058</td>
  173. <td align="left">9.01e-10</td>
  174. <td align="left">3.64e-09</td>
  175. <td align="left"><code style="font-size: x-large;">TGCTGCTAAAG</code></td>
  176. </tr>
  177. <tr>
  178. <td align="left"><a name="occurrences_phiX174">1</a></td>
  179. <td align="left">phiX174</td>
  180. <td align="left">3155</td>
  181. <td align="left">3165</td>
  182. <td align="left">1.02e-09</td>
  183. <td align="left">3.64e-09</td>
  184. <td align="left"><code style="font-size: x-large;">TATGGCTAAAG</code></td>
  185. </tr>
  186. <tr>
  187. <td align="left"><a name="occurrences_phiX174">1</a></td>
  188. <td align="left">phiX174</td>
  189. <td align="left">5009</td>
  190. <td align="left">5019</td>
  191. <td align="left">1.02e-09</td>
  192. <td align="left">3.64e-09</td>
  193. <td align="left"><code style="font-size: x-large;">TGTGGCTAAAT</code></td>
  194. </tr>
  195. <tr>
  196. <td align="left"><a name="occurrences_phiX174">1</a></td>
  197. <td align="left">phiX174</td>
  198. <td align="left">814</td>
  199. <td align="left">824</td>
  200. <td align="left">1.25e-09</td>
  201. <td align="left">4.07e-09</td>
  202. <td align="left"><code style="font-size: x-large;">TGCGTCAAAAA</code></td>
  203. </tr>
  204. <tr>
  205. <td align="left"><a name="occurrences_phiX174">1</a></td>
  206. <td align="left">phiX174</td>
  207. <td align="left">2832</td>
  208. <td align="left">2842</td>
  209. <td align="left">1.47e-09</td>
  210. <td align="left">4.38e-09</td>
  211. <td align="left"><code style="font-size: x-large;">TTGGTCTAACT</code></td>
  212. </tr>
  213. <tr>
  214. <td align="left"><a name="occurrences_phiX174">1</a></td>
  215. <td align="left">phiX174</td>
  216. <td align="left">3830</td>
  217. <td align="left">3840</td>
  218. <td align="left">1.75e-09</td>
  219. <td align="left">4.81e-09</td>
  220. <td align="left"><code style="font-size: x-large;">TATTGATAAAG</code></td>
  221. </tr>
  222. <tr>
  223. <td align="left"><a name="occurrences_phiX174">1</a></td>
  224. <td align="left">phiX174</td>
  225. <td align="left">3560</td>
  226. <td align="left">3570</td>
  227. <td align="left">1.96e-09</td>
  228. <td align="left">5e-09</td>
  229. <td align="left"><code style="font-size: x-large;">TGCGTCTATTA</code></td>
  230. </tr>
  231. <tr>
  232. <td align="left"><a name="occurrences_phiX174">1</a></td>
  233. <td align="left">phiX174</td>
  234. <td align="left">2882</td>
  235. <td align="left">2892</td>
  236. <td align="left">2.32e-09</td>
  237. <td align="left">5.53e-09</td>
  238. <td align="left"><code style="font-size: x-large;">AGGTTATTAAA</code></td>
  239. </tr>
  240. <tr>
  241. <td align="left"><a name="occurrences_phiX174">1</a></td>
  242. <td align="left">phiX174</td>
  243. <td align="left">4453</td>
  244. <td align="left">4463</td>
  245. <td align="left">2.65e-09</td>
  246. <td align="left">5.91e-09</td>
  247. <td align="left"><code style="font-size: x-large;">AAGGTATTAAG</code></td>
  248. </tr>
  249. <tr>
  250. <td align="left"><a name="occurrences_phiX174">1</a></td>
  251. <td align="left">phiX174</td>
  252. <td align="left">2493</td>
  253. <td align="left">2503</td>
  254. <td align="left">3.09e-09</td>
  255. <td align="left">6.08e-09</td>
  256. <td align="left"><code style="font-size: x-large;">GACACCTAAAG</code></td>
  257. </tr>
  258. <tr>
  259. <td align="left"><a name="occurrences_phiX174">1</a></td>
  260. <td align="left">phiX174</td>
  261. <td align="left">4104</td>
  262. <td align="left">4114</td>
  263. <td align="left">3.09e-09</td>
  264. <td align="left">6.08e-09</td>
  265. <td align="left"><code style="font-size: x-large;">GGCTTCCATAA</code></td>
  266. </tr>
  267. <tr>
  268. <td align="left"><a name="occurrences_phiX174">1</a></td>
  269. <td align="left">phiX174</td>
  270. <td align="left">4955</td>
  271. <td align="left">4965</td>
  272. <td align="left">3.24e-09</td>
  273. <td align="left">6.08e-09</td>
  274. <td align="left"><code style="font-size: x-large;">TGATGCTAAAG</code></td>
  275. </tr>
  276. <tr>
  277. <td align="left"><a name="occurrences_phiX174">1</a></td>
  278. <td align="left">phiX174</td>
  279. <td align="left">1885</td>
  280. <td align="left">1895</td>
  281. <td align="left">3.72e-09</td>
  282. <td align="left">6.32e-09</td>
  283. <td align="left"><code style="font-size: x-large;">TGCGACTAAAG</code></td>
  284. </tr>
  285. <tr>
  286. <td align="left"><a name="occurrences_phiX174">1</a></td>
  287. <td align="left">phiX174</td>
  288. <td align="left">3376</td>
  289. <td align="left">3386</td>
  290. <td align="left">3.72e-09</td>
  291. <td align="left">6.32e-09</td>
  292. <td align="left"><code style="font-size: x-large;">AGAATCAAAAA</code></td>
  293. </tr>
  294. <tr>
  295. <td align="left"><a name="occurrences_phiX174">1</a></td>
  296. <td align="left">phiX174</td>
  297. <td align="left">52</td>
  298. <td align="left">62</td>
  299. <td align="left">4.01e-09</td>
  300. <td align="left">6.45e-09</td>
  301. <td align="left"><code style="font-size: x-large;">TGAGTCGAAAA</code></td>
  302. </tr>
  303. <tr>
  304. <td align="left"><a name="occurrences_phiX174">1</a></td>
  305. <td align="left">phiX174</td>
  306. <td align="left">1390</td>
  307. <td align="left">1400</td>
  308. <td align="left">4.15e-09</td>
  309. <td align="left">6.45e-09</td>
  310. <td align="left"><code style="font-size: x-large;">TATCTATAACA</code></td>
  311. </tr>
  312. <tr>
  313. <td align="left"><a name="occurrences_phiX174">1</a></td>
  314. <td align="left">phiX174</td>
  315. <td align="left">2017</td>
  316. <td align="left">2027</td>
  317. <td align="left">4.57e-09</td>
  318. <td align="left">6.75e-09</td>
  319. <td align="left"><code style="font-size: x-large;">TTCGTCTAAGA</code></td>
  320. </tr>
  321. <tr>
  322. <td align="left"><a name="occurrences_phiX174">1</a></td>
  323. <td align="left">phiX174</td>
  324. <td align="left">1000</td>
  325. <td align="left">1010</td>
  326. <td align="left">4.73e-09</td>
  327. <td align="left">6.75e-09</td>
  328. <td align="left"><code style="font-size: x-large;">TATGTCTAATA</code></td>
  329. </tr>
  330. <tr>
  331. <td align="left"><a name="occurrences_phiX174">1</a></td>
  332. <td align="left">phiX174</td>
  333. <td align="left">1555</td>
  334. <td align="left">1565</td>
  335. <td align="left">5.47e-09</td>
  336. <td align="left">7.4e-09</td>
  337. <td align="left"><code style="font-size: x-large;">GACTTCTACCA</code></td>
  338. </tr>
  339. <tr>
  340. <td align="left"><a name="occurrences_phiX174">1</a></td>
  341. <td align="left">phiX174</td>
  342. <td align="left">4430</td>
  343. <td align="left">4440</td>
  344. <td align="left">5.66e-09</td>
  345. <td align="left">7.4e-09</td>
  346. <td align="left"><code style="font-size: x-large;">TGAGTATAATT</code></td>
  347. </tr>
  348. <tr>
  349. <td align="left"><a name="occurrences_phiX174">1</a></td>
  350. <td align="left">phiX174</td>
  351. <td align="left">1927</td>
  352. <td align="left">1937</td>
  353. <td align="left">5.84e-09</td>
  354. <td align="left">7.4e-09</td>
  355. <td align="left"><code style="font-size: x-large;">GACTTATACCG</code></td>
  356. </tr>
  357. <tr>
  358. <td align="left"><a name="occurrences_phiX174">1</a></td>
  359. <td align="left">phiX174</td>
  360. <td align="left">2981</td>
  361. <td align="left">2991</td>
  362. <td align="left">6.01e-09</td>
  363. <td align="left">7.4e-09</td>
  364. <td align="left"><code style="font-size: x-large;">CATGTCTAAAT</code></td>
  365. </tr>
  366. <tr>
  367. <td align="left"><a name="occurrences_phiX174">1</a></td>
  368. <td align="left">phiX174</td>
  369. <td align="left">4203</td>
  370. <td align="left">4213</td>
  371. <td align="left">6.35e-09</td>
  372. <td align="left">7.52e-09</td>
  373. <td align="left"><code style="font-size: x-large;">GACGGCCATAA</code></td>
  374. </tr>
  375. <tr>
  376. <td align="left"><a name="occurrences_phiX174">1</a></td>
  377. <td align="left">phiX174</td>
  378. <td align="left">1669</td>
  379. <td align="left">1679</td>
  380. <td align="left">6.52e-09</td>
  381. <td align="left">7.52e-09</td>
  382. <td align="left"><code style="font-size: x-large;">TGGAGGTAAAA</code></td>
  383. </tr>
  384. <tr>
  385. <td align="left"><a name="occurrences_phiX174">1</a></td>
  386. <td align="left">phiX174</td>
  387. <td align="left">3260</td>
  388. <td align="left">3270</td>
  389. <td align="left">7.15e-09</td>
  390. <td align="left">7.78e-09</td>
  391. <td align="left"><code style="font-size: x-large;">CGCTGATAAAG</code></td>
  392. </tr>
  393. <tr>
  394. <td align="left"><a name="occurrences_phiX174">1</a></td>
  395. <td align="left">phiX174</td>
  396. <td align="left">3047</td>
  397. <td align="left">3057</td>
  398. <td align="left">7.38e-09</td>
  399. <td align="left">7.78e-09</td>
  400. <td align="left"><code style="font-size: x-large;">TACCGATAACA</code></td>
  401. </tr>
  402. <tr>
  403. <td align="left"><a name="occurrences_phiX174">1</a></td>
  404. <td align="left">phiX174</td>
  405. <td align="left">4118</td>
  406. <td align="left">4128</td>
  407. <td align="left">7.62e-09</td>
  408. <td align="left">7.78e-09</td>
  409. <td align="left"><code style="font-size: x-large;">GATGGATAACC</code></td>
  410. </tr>
  411. <tr>
  412. <td align="left"><a name="occurrences_phiX174">1</a></td>
  413. <td align="left">phiX174</td>
  414. <td align="left">4176</td>
  415. <td align="left">4186</td>
  416. <td align="left">7.62e-09</td>
  417. <td align="left">7.78e-09</td>
  418. <td align="left"><code style="font-size: x-large;">GAGTTCGATAA</code></td>
  419. </tr>
  420. <tr>
  421. <td align="left"><a name="occurrences_phiX174">1</a></td>
  422. <td align="left">phiX174</td>
  423. <td align="left">5370</td>
  424. <td align="left">5380</td>
  425. <td align="left">8.08e-09</td>
  426. <td align="left">8.02e-09</td>
  427. <td align="left"><code style="font-size: x-large;">GGCGTATCCAA</code></td>
  428. </tr>
  429. <tr>
  430. <td align="left"><a name="occurrences_phiX174">1</a></td>
  431. <td align="left">phiX174</td>
  432. <td align="left">698</td>
  433. <td align="left">708</td>
  434. <td align="left">9.08e-09</td>
  435. <td align="left">8.07e-09</td>
  436. <td align="left"><code style="font-size: x-large;">TACGGAAAACA</code></td>
  437. </tr>
  438. <tr>
  439. <td align="left"><a name="occurrences_phiX174">1</a></td>
  440. <td align="left">phiX174</td>
  441. <td align="left">1242</td>
  442. <td align="left">1252</td>
  443. <td align="left">9.08e-09</td>
  444. <td align="left">8.07e-09</td>
  445. <td align="left"><code style="font-size: x-large;">AGTGGATTAAG</code></td>
  446. </tr>
  447. <tr>
  448. <td align="left"><a name="occurrences_phiX174">1</a></td>
  449. <td align="left">phiX174</td>
  450. <td align="left">2583</td>
  451. <td align="left">2593</td>
  452. <td align="left">9.08e-09</td>
  453. <td align="left">8.07e-09</td>
  454. <td align="left"><code style="font-size: x-large;">TACATCTGTCA</code></td>
  455. </tr>
  456. <tr>
  457. <td align="left"><a name="occurrences_phiX174">1</a></td>
  458. <td align="left">phiX174</td>
  459. <td align="left">2299</td>
  460. <td align="left">2309</td>
  461. <td align="left">9.63e-09</td>
  462. <td align="left">8.07e-09</td>
  463. <td align="left"><code style="font-size: x-large;">TGAGGTTATAA</code></td>
  464. </tr>
  465. <tr>
  466. <td align="left"><a name="occurrences_phiX174">1</a></td>
  467. <td align="left">phiX174</td>
  468. <td align="left">275</td>
  469. <td align="left">285</td>
  470. <td align="left">9.9e-09</td>
  471. <td align="left">8.07e-09</td>
  472. <td align="left"><code style="font-size: x-large;">GGTTTAGATAT</code></td>
  473. </tr>
  474. <tr>
  475. <td align="left"><a name="occurrences_phiX174">1</a></td>
  476. <td align="left">phiX174</td>
  477. <td align="left">1801</td>
  478. <td align="left">1811</td>
  479. <td align="left">9.9e-09</td>
  480. <td align="left">8.07e-09</td>
  481. <td align="left"><code style="font-size: x-large;">GACCTATAAAC</code></td>
  482. </tr>
  483. <tr>
  484. <td align="left"><a name="occurrences_phiX174">1</a></td>
  485. <td align="left">phiX174</td>
  486. <td align="left">1288</td>
  487. <td align="left">1298</td>
  488. <td align="left">1.02e-08</td>
  489. <td align="left">8.07e-09</td>
  490. <td align="left"><code style="font-size: x-large;">GACTGTTAACA</code></td>
  491. </tr>
  492. <tr>
  493. <td align="left"><a name="occurrences_phiX174">1</a></td>
  494. <td align="left">phiX174</td>
  495. <td align="left">4189</td>
  496. <td align="left">4199</td>
  497. <td align="left">1.02e-08</td>
  498. <td align="left">8.07e-09</td>
  499. <td align="left"><code style="font-size: x-large;">GTGATATGTAT</code></td>
  500. </tr>
  501. <tr>
  502. <td align="left"><a name="occurrences_phiX174">1</a></td>
  503. <td align="left">phiX174</td>
  504. <td align="left">1303</td>
  505. <td align="left">1313</td>
  506. <td align="left">1.09e-08</td>
  507. <td align="left">8.07e-09</td>
  508. <td align="left"><code style="font-size: x-large;">TGGTTATATTG</code></td>
  509. </tr>
  510. <tr>
  511. <td align="left"><a name="occurrences_phiX174">1</a></td>
  512. <td align="left">phiX174</td>
  513. <td align="left">1386</td>
  514. <td align="left">1396</td>
  515. <td align="left">1.09e-08</td>
  516. <td align="left">8.07e-09</td>
  517. <td align="left"><code style="font-size: x-large;">TGAATATCTAT</code></td>
  518. </tr>
  519. <tr>
  520. <td align="left"><a name="occurrences_phiX174">1</a></td>
  521. <td align="left">phiX174</td>
  522. <td align="left">2577</td>
  523. <td align="left">2587</td>
  524. <td align="left">1.09e-08</td>
  525. <td align="left">8.07e-09</td>
  526. <td align="left"><code style="font-size: x-large;">GATGGATACAT</code></td>
  527. </tr>
  528. <tr>
  529. <td align="left"><a name="occurrences_phiX174">1</a></td>
  530. <td align="left">phiX174</td>
  531. <td align="left">3772</td>
  532. <td align="left">3782</td>
  533. <td align="left">1.09e-08</td>
  534. <td align="left">8.07e-09</td>
  535. <td align="left"><code style="font-size: x-large;">AGGATATTTCT</code></td>
  536. </tr>
  537. <tr>
  538. <td align="left"><a name="occurrences_phiX174">1</a></td>
  539. <td align="left">phiX174</td>
  540. <td align="left">904</td>
  541. <td align="left">914</td>
  542. <td align="left">1.13e-08</td>
  543. <td align="left">8.07e-09</td>
  544. <td align="left"><code style="font-size: x-large;">AGGTACTAAAG</code></td>
  545. </tr>
  546. <tr>
  547. <td align="left"><a name="occurrences_phiX174">1</a></td>
  548. <td align="left">phiX174</td>
  549. <td align="left">937</td>
  550. <td align="left">947</td>
  551. <td align="left">1.18e-08</td>
  552. <td align="left">8.07e-09</td>
  553. <td align="left"><code style="font-size: x-large;">TTGGTATGTAG</code></td>
  554. </tr>
  555. <tr>
  556. <td align="left"><a name="occurrences_phiX174">1</a></td>
  557. <td align="left">phiX174</td>
  558. <td align="left">2279</td>
  559. <td align="left">2289</td>
  560. <td align="left">1.18e-08</td>
  561. <td align="left">8.07e-09</td>
  562. <td align="left"><code style="font-size: x-large;">TCGTGATAAAA</code></td>
  563. </tr>
  564. <tr>
  565. <td align="left"><a name="occurrences_phiX174">1</a></td>
  566. <td align="left">phiX174</td>
  567. <td align="left">3164</td>
  568. <td align="left">3174</td>
  569. <td align="left">1.18e-08</td>
  570. <td align="left">8.07e-09</td>
  571. <td align="left"><code style="font-size: x-large;">AGCTGGTAAAG</code></td>
  572. </tr>
  573. <tr>
  574. <td align="left"><a name="occurrences_phiX174">1</a></td>
  575. <td align="left">phiX174</td>
  576. <td align="left">24</td>
  577. <td align="left">34</td>
  578. <td align="left">1.23e-08</td>
  579. <td align="left">8.29e-09</td>
  580. <td align="left"><code style="font-size: x-large;">AGAAGTTAACA</code></td>
  581. </tr>
  582. <tr>
  583. <td align="left"><a name="occurrences_phiX174">1</a></td>
  584. <td align="left">phiX174</td>
  585. <td align="left">853</td>
  586. <td align="left">863</td>
  587. <td align="left">1.28e-08</td>
  588. <td align="left">8.47e-09</td>
  589. <td align="left"><code style="font-size: x-large;">TAAAGGTAAAA</code></td>
  590. </tr>
  591. <tr>
  592. <td align="left"><a name="occurrences_phiX174">1</a></td>
  593. <td align="left">phiX174</td>
  594. <td align="left">838</td>
  595. <td align="left">848</td>
  596. <td align="left">1.33e-08</td>
  597. <td align="left">8.48e-09</td>
  598. <td align="left"><code style="font-size: x-large;">GAGTGATGTAA</code></td>
  599. </tr>
  600. <tr>
  601. <td align="left"><a name="occurrences_phiX174">1</a></td>
  602. <td align="left">phiX174</td>
  603. <td align="left">1984</td>
  604. <td align="left">1994</td>
  605. <td align="left">1.33e-08</td>
  606. <td align="left">8.48e-09</td>
  607. <td align="left"><code style="font-size: x-large;">AATTTCTATGA</code></td>
  608. </tr>
  609. <tr>
  610. <td align="left"><a name="occurrences_phiX174">1</a></td>
  611. <td align="left">phiX174</td>
  612. <td align="left">4307</td>
  613. <td align="left">4317</td>
  614. <td align="left">1.45e-08</td>
  615. <td align="left">9.07e-09</td>
  616. <td align="left"><code style="font-size: x-large;">TATTAATAACA</code></td>
  617. </tr>
  618. <tr>
  619. <td align="left"><a name="occurrences_phiX174">1</a></td>
  620. <td align="left">phiX174</td>
  621. <td align="left">1</td>
  622. <td align="left">11</td>
  623. <td align="left">1.49e-08</td>
  624. <td align="left">9.2e-09</td>
  625. <td align="left"><code style="font-size: x-large;">GAGTTTTATCG</code></td>
  626. </tr>
  627. <tr>
  628. <td align="left"><a name="occurrences_phiX174">1</a></td>
  629. <td align="left">phiX174</td>
  630. <td align="left">4303</td>
  631. <td align="left">4313</td>
  632. <td align="left">1.63e-08</td>
  633. <td align="left">9.84e-09</td>
  634. <td align="left"><code style="font-size: x-large;">TTGATATTAAT</code></td>
  635. </tr>
  636. <tr>
  637. <td align="left"><a name="occurrences_phiX174">1</a></td>
  638. <td align="left">phiX174</td>
  639. <td align="left">5033</td>
  640. <td align="left">5043</td>
  641. <td align="left">1.69e-08</td>
  642. <td align="left">1.01e-08</td>
  643. <td align="left"><code style="font-size: x-large;">GTCAGATATGG</code></td>
  644. </tr>
  645. <tr>
  646. <td align="left"><a name="occurrences_phiX174">1</a></td>
  647. <td align="left">phiX174</td>
  648. <td align="left">322</td>
  649. <td align="left">332</td>
  650. <td align="left">1.78e-08</td>
  651. <td align="left">1.04e-08</td>
  652. <td align="left"><code style="font-size: x-large;">GACATTTTAAA</code></td>
  653. </tr>
  654. <tr>
  655. <td align="left"><a name="occurrences_phiX174">1</a></td>
  656. <td align="left">phiX174</td>
  657. <td align="left">2579</td>
  658. <td align="left">2589</td>
  659. <td align="left">1.88e-08</td>
  660. <td align="left">1.08e-08</td>
  661. <td align="left"><code style="font-size: x-large;">TGGATACATCT</code></td>
  662. </tr>
  663. <tr>
  664. <td align="left"><a name="occurrences_phiX174">1</a></td>
  665. <td align="left">phiX174</td>
  666. <td align="left">5001</td>
  667. <td align="left">5011</td>
  668. <td align="left">2.1e-08</td>
  669. <td align="left">1.19e-08</td>
  670. <td align="left"><code style="font-size: x-large;">GGTTTCTATGT</code></td>
  671. </tr>
  672. <tr>
  673. <td align="left"><a name="occurrences_phiX174">1</a></td>
  674. <td align="left">phiX174</td>
  675. <td align="left">3569</td>
  676. <td align="left">3579</td>
  677. <td align="left">2.22e-08</td>
  678. <td align="left">1.2e-08</td>
  679. <td align="left"><code style="font-size: x-large;">TATGGAAAACA</code></td>
  680. </tr>
  681. <tr>
  682. <td align="left"><a name="occurrences_phiX174">1</a></td>
  683. <td align="left">phiX174</td>
  684. <td align="left">4217</td>
  685. <td align="left">4227</td>
  686. <td align="left">2.22e-08</td>
  687. <td align="left">1.2e-08</td>
  688. <td align="left"><code style="font-size: x-large;">TGCTTCTGACG</code></td>
  689. </tr>
  690. <tr>
  691. <td align="left"><a name="occurrences_phiX174">1</a></td>
  692. <td align="left">phiX174</td>
  693. <td align="left">4262</td>
  694. <td align="left">4272</td>
  695. <td align="left">2.22e-08</td>
  696. <td align="left">1.2e-08</td>
  697. <td align="left"><code style="font-size: x-large;">AATGGATGAAT</code></td>
  698. </tr>
  699. <tr>
  700. <td align="left"><a name="occurrences_phiX174">1</a></td>
  701. <td align="left">phiX174</td>
  702. <td align="left">194</td>
  703. <td align="left">204</td>
  704. <td align="left">2.33e-08</td>
  705. <td align="left">1.24e-08</td>
  706. <td align="left"><code style="font-size: x-large;">ATCAACTAACG</code></td>
  707. </tr>
  708. <tr>
  709. <td align="left"><a name="occurrences_phiX174">1</a></td>
  710. <td align="left">phiX174</td>
  711. <td align="left">131</td>
  712. <td align="left">141</td>
  713. <td align="left">2.46e-08</td>
  714. <td align="left">1.29e-08</td>
  715. <td align="left"><code style="font-size: x-large;">AAATGAGAAAA</code></td>
  716. </tr>
  717. <tr>
  718. <td align="left"><a name="occurrences_phiX174">1</a></td>
  719. <td align="left">phiX174</td>
  720. <td align="left">1491</td>
  721. <td align="left">1501</td>
  722. <td align="left">2.59e-08</td>
  723. <td align="left">1.34e-08</td>
  724. <td align="left"><code style="font-size: x-large;">GCCATCTCAAA</code></td>
  725. </tr>
  726. <tr>
  727. <td align="left"><a name="occurrences_phiX174">1</a></td>
  728. <td align="left">phiX174</td>
  729. <td align="left">434</td>
  730. <td align="left">444</td>
  731. <td align="left">2.7e-08</td>
  732. <td align="left">1.38e-08</td>
  733. <td align="left"><code style="font-size: x-large;">GGCCTCTATTA</code></td>
  734. </tr>
  735. <tr>
  736. <td align="left"><a name="occurrences_phiX174">1</a></td>
  737. <td align="left">phiX174</td>
  738. <td align="left">102</td>
  739. <td align="left">112</td>
  740. <td align="left">2.82e-08</td>
  741. <td align="left">1.4e-08</td>
  742. <td align="left"><code style="font-size: x-large;">GAATTAAATCG</code></td>
  743. </tr>
  744. <tr>
  745. <td align="left"><a name="occurrences_phiX174">1</a></td>
  746. <td align="left">phiX174</td>
  747. <td align="left">903</td>
  748. <td align="left">913</td>
  749. <td align="left">2.82e-08</td>
  750. <td align="left">1.4e-08</td>
  751. <td align="left"><code style="font-size: x-large;">GAGGTACTAAA</code></td>
  752. </tr>
  753. <tr>
  754. <td align="left"><a name="occurrences_phiX174">1</a></td>
  755. <td align="left">phiX174</td>
  756. <td align="left">4565</td>
  757. <td align="left">4575</td>
  758. <td align="left">2.97e-08</td>
  759. <td align="left">1.45e-08</td>
  760. <td align="left"><code style="font-size: x-large;">TTGGTTTATCG</code></td>
  761. </tr>
  762. <tr>
  763. <td align="left"><a name="occurrences_phiX174">1</a></td>
  764. <td align="left">phiX174</td>
  765. <td align="left">4748</td>
  766. <td align="left">4758</td>
  767. <td align="left">3.12e-08</td>
  768. <td align="left">1.51e-08</td>
  769. <td align="left"><code style="font-size: x-large;">TACAGCTAATG</code></td>
  770. </tr>
  771. <tr>
  772. <td align="left"><a name="occurrences_phiX174">1</a></td>
  773. <td align="left">phiX174</td>
  774. <td align="left">1348</td>
  775. <td align="left">1358</td>
  776. <td align="left">3.48e-08</td>
  777. <td align="left">1.64e-08</td>
  778. <td align="left"><code style="font-size: x-large;">TACCAATAAAA</code></td>
  779. </tr>
  780. <tr>
  781. <td align="left"><a name="occurrences_phiX174">1</a></td>
  782. <td align="left">phiX174</td>
  783. <td align="left">2622</td>
  784. <td align="left">2632</td>
  785. <td align="left">3.48e-08</td>
  786. <td align="left">1.64e-08</td>
  787. <td align="left"><code style="font-size: x-large;">TGCTGATATTG</code></td>
  788. </tr>
  789. <tr>
  790. <td align="left"><a name="occurrences_phiX174">1</a></td>
  791. <td align="left">phiX174</td>
  792. <td align="left">239</td>
  793. <td align="left">249</td>
  794. <td align="left">3.69e-08</td>
  795. <td align="left">1.65e-08</td>
  796. <td align="left"><code style="font-size: x-large;">AGTGGCTTAAT</code></td>
  797. </tr>
  798. <tr>
  799. <td align="left"><a name="occurrences_phiX174">1</a></td>
  800. <td align="left">phiX174</td>
  801. <td align="left">467</td>
  802. <td align="left">477</td>
  803. <td align="left">3.69e-08</td>
  804. <td align="left">1.65e-08</td>
  805. <td align="left"><code style="font-size: x-large;">TTTGGATTTAA</code></td>
  806. </tr>
  807. <tr>
  808. <td align="left"><a name="occurrences_phiX174">1</a></td>
  809. <td align="left">phiX174</td>
  810. <td align="left">500</td>
  811. <td align="left">510</td>
  812. <td align="left">3.69e-08</td>
  813. <td align="left">1.65e-08</td>
  814. <td align="left"><code style="font-size: x-large;">GACGAGTAACA</code></td>
  815. </tr>
  816. <tr>
  817. <td align="left"><a name="occurrences_phiX174">1</a></td>
  818. <td align="left">phiX174</td>
  819. <td align="left">4033</td>
  820. <td align="left">4043</td>
  821. <td align="left">3.69e-08</td>
  822. <td align="left">1.65e-08</td>
  823. <td align="left"><code style="font-size: x-large;">AGCGTATCGAG</code></td>
  824. </tr>
  825. <tr>
  826. <td align="left"><a name="occurrences_phiX174">1</a></td>
  827. <td align="left">phiX174</td>
  828. <td align="left">2026</td>
  829. <td align="left">2036</td>
  830. <td align="left">3.91e-08</td>
  831. <td align="left">1.68e-08</td>
  832. <td align="left"><code style="font-size: x-large;">GAAGTTTAAGA</code></td>
  833. </tr>
  834. <tr>
  835. <td align="left"><a name="occurrences_phiX174">1</a></td>
  836. <td align="left">phiX174</td>
  837. <td align="left">3001</td>
  838. <td align="left">3011</td>
  839. <td align="left">3.91e-08</td>
  840. <td align="left">1.68e-08</td>
  841. <td align="left"><code style="font-size: x-large;">GCGGTCAAAAA</code></td>
  842. </tr>
  843. <tr>
  844. <td align="left"><a name="occurrences_phiX174">1</a></td>
  845. <td align="left">phiX174</td>
  846. <td align="left">3776</td>
  847. <td align="left">3786</td>
  848. <td align="left">3.91e-08</td>
  849. <td align="left">1.68e-08</td>
  850. <td align="left"><code style="font-size: x-large;">TATTTCTAATG</code></td>
  851. </tr>
  852. <tr>
  853. <td align="left"><a name="occurrences_phiX174">1</a></td>
  854. <td align="left">phiX174</td>
  855. <td align="left">4237</td>
  856. <td align="left">4247</td>
  857. <td align="left">4.14e-08</td>
  858. <td align="left">1.76e-08</td>
  859. <td align="left"><code style="font-size: x-large;">AGTTTGTATCT</code></td>
  860. </tr>
  861. <tr>
  862. <td align="left"><a name="occurrences_phiX174">1</a></td>
  863. <td align="left">phiX174</td>
  864. <td align="left">803</td>
  865. <td align="left">813</td>
  866. <td align="left">4.36e-08</td>
  867. <td align="left">1.81e-08</td>
  868. <td align="left"><code style="font-size: x-large;">AGAAGAAAACG</code></td>
  869. </tr>
  870. <tr>
  871. <td align="left"><a name="occurrences_phiX174">1</a></td>
  872. <td align="left">phiX174</td>
  873. <td align="left">3429</td>
  874. <td align="left">3439</td>
  875. <td align="left">4.36e-08</td>
  876. <td align="left">1.81e-08</td>
  877. <td align="left"><code style="font-size: x-large;">GAGATGCAAAA</code></td>
  878. </tr>
  879. <tr>
  880. <td align="left"><a name="occurrences_phiX174">1</a></td>
  881. <td align="left">phiX174</td>
  882. <td align="left">99</td>
  883. <td align="left">109</td>
  884. <td align="left">4.57e-08</td>
  885. <td align="left">1.85e-08</td>
  886. <td align="left"><code style="font-size: x-large;">TACGAATTAAA</code></td>
  887. </tr>
  888. <tr>
  889. <td align="left"><a name="occurrences_phiX174">1</a></td>
  890. <td align="left">phiX174</td>
  891. <td align="left">3770</td>
  892. <td align="left">3780</td>
  893. <td align="left">4.57e-08</td>
  894. <td align="left">1.85e-08</td>
  895. <td align="left"><code style="font-size: x-large;">AAAGGATATTT</code></td>
  896. </tr>
  897. <tr>
  898. <td align="left"><a name="occurrences_phiX174">1</a></td>
  899. <td align="left">phiX174</td>
  900. <td align="left">67</td>
  901. <td align="left">77</td>
  902. <td align="left">4.99e-08</td>
  903. <td align="left">2e-08</td>
  904. <td align="left"><code style="font-size: x-large;">TCTTGATAAAG</code></td>
  905. </tr>
  906. <tr>
  907. <td align="left"><a name="occurrences_phiX174">1</a></td>
  908. <td align="left">phiX174</td>
  909. <td align="left">4338</td>
  910. <td align="left">4348</td>
  911. <td align="left">5.21e-08</td>
  912. <td align="left">2.04e-08</td>
  913. <td align="left"><code style="font-size: x-large;">GGGGACGAAAA</code></td>
  914. </tr>
  915. <tr>
  916. <td align="left"><a name="occurrences_phiX174">1</a></td>
  917. <td align="left">phiX174</td>
  918. <td align="left">5332</td>
  919. <td align="left">5342</td>
  920. <td align="left">5.21e-08</td>
  921. <td align="left">2.04e-08</td>
  922. <td align="left"><code style="font-size: x-large;">ATCTGCTCAAA</code></td>
  923. </tr>
  924. <tr>
  925. <td align="left"><a name="occurrences_phiX174">1</a></td>
  926. <td align="left">phiX174</td>
  927. <td align="left">277</td>
  928. <td align="left">287</td>
  929. <td align="left">5.46e-08</td>
  930. <td align="left">2.07e-08</td>
  931. <td align="left"><code style="font-size: x-large;">TTTAGATATGA</code></td>
  932. </tr>
  933. <tr>
  934. <td align="left"><a name="occurrences_phiX174">1</a></td>
  935. <td align="left">phiX174</td>
  936. <td align="left">3000</td>
  937. <td align="left">3010</td>
  938. <td align="left">5.46e-08</td>
  939. <td align="left">2.07e-08</td>
  940. <td align="left"><code style="font-size: x-large;">GGCGGTCAAAA</code></td>
  941. </tr>
  942. <tr>
  943. <td align="left"><a name="occurrences_phiX174">1</a></td>
  944. <td align="left">phiX174</td>
  945. <td align="left">3812</td>
  946. <td align="left">3822</td>
  947. <td align="left">5.46e-08</td>
  948. <td align="left">2.07e-08</td>
  949. <td align="left"><code style="font-size: x-large;">GGTTGATATTT</code></td>
  950. </tr>
  951. <tr>
  952. <td align="left"><a name="occurrences_phiX174">1</a></td>
  953. <td align="left">phiX174</td>
  954. <td align="left">1909</td>
  955. <td align="left">1919</td>
  956. <td align="left">5.71e-08</td>
  957. <td align="left">2.15e-08</td>
  958. <td align="left"><code style="font-size: x-large;">TAACGCTAAAG</code></td>
  959. </tr>
  960. <tr>
  961. <td align="left"><a name="occurrences_phiX174">1</a></td>
  962. <td align="left">phiX174</td>
  963. <td align="left">3079</td>
  964. <td align="left">3089</td>
  965. <td align="left">6.01e-08</td>
  966. <td align="left">2.21e-08</td>
  967. <td align="left"><code style="font-size: x-large;">CTGGTATTAAA</code></td>
  968. </tr>
  969. <tr>
  970. <td align="left"><a name="occurrences_phiX174">1</a></td>
  971. <td align="left">phiX174</td>
  972. <td align="left">3891</td>
  973. <td align="left">3901</td>
  974. <td align="left">6.01e-08</td>
  975. <td align="left">2.21e-08</td>
  976. <td align="left"><code style="font-size: x-large;">ATTGGCTCTAA</code></td>
  977. </tr>
  978. <tr>
  979. <td align="left"><a name="occurrences_phiX174">1</a></td>
  980. <td align="left">phiX174</td>
  981. <td align="left">37</td>
  982. <td align="left">47</td>
  983. <td align="left">6.34e-08</td>
  984. <td align="left">2.24e-08</td>
  985. <td align="left"><code style="font-size: x-large;">TTCGGATATTT</code></td>
  986. </tr>
  987. <tr>
  988. <td align="left"><a name="occurrences_phiX174">1</a></td>
  989. <td align="left">phiX174</td>
  990. <td align="left">380</td>
  991. <td align="left">390</td>
  992. <td align="left">6.34e-08</td>
  993. <td align="left">2.24e-08</td>
  994. <td align="left"><code style="font-size: x-large;">GTAAGAAATCA</code></td>
  995. </tr>
  996. <tr>
  997. <td align="left"><a name="occurrences_phiX174">1</a></td>
  998. <td align="left">phiX174</td>
  999. <td align="left">3828</td>
  1000. <td align="left">3838</td>
  1001. <td align="left">6.34e-08</td>
  1002. <td align="left">2.24e-08</td>
  1003. <td align="left"><code style="font-size: x-large;">GGTATTGATAA</code></td>
  1004. </tr>
  1005. <tr>
  1006. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1007. <td align="left">phiX174</td>
  1008. <td align="left">4042</td>
  1009. <td align="left">4052</td>
  1010. <td align="left">6.34e-08</td>
  1011. <td align="left">2.24e-08</td>
  1012. <td align="left"><code style="font-size: x-large;">AGGCTCTTAAA</code></td>
  1013. </tr>
  1014. <tr>
  1015. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1016. <td align="left">phiX174</td>
  1017. <td align="left">4860</td>
  1018. <td align="left">4870</td>
  1019. <td align="left">6.69e-08</td>
  1020. <td align="left">2.34e-08</td>
  1021. <td align="left"><code style="font-size: x-large;">AGCTTGCAAAA</code></td>
  1022. </tr>
  1023. <tr>
  1024. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1025. <td align="left">phiX174</td>
  1026. <td align="left">3388</td>
  1027. <td align="left">3398</td>
  1028. <td align="left">7.06e-08</td>
  1029. <td align="left">2.43e-08</td>
  1030. <td align="left"><code style="font-size: x-large;">AGCTTACTAAA</code></td>
  1031. </tr>
  1032. <tr>
  1033. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1034. <td align="left">phiX174</td>
  1035. <td align="left">4428</td>
  1036. <td align="left">4438</td>
  1037. <td align="left">7.06e-08</td>
  1038. <td align="left">2.43e-08</td>
  1039. <td align="left"><code style="font-size: x-large;">GATGAGTATAA</code></td>
  1040. </tr>
  1041. <tr>
  1042. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1043. <td align="left">phiX174</td>
  1044. <td align="left">1671</td>
  1045. <td align="left">1681</td>
  1046. <td align="left">7.42e-08</td>
  1047. <td align="left">2.5e-08</td>
  1048. <td align="left"><code style="font-size: x-large;">GAGGTAAAACC</code></td>
  1049. </tr>
  1050. <tr>
  1051. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1052. <td align="left">phiX174</td>
  1053. <td align="left">2317</td>
  1054. <td align="left">2327</td>
  1055. <td align="left">7.42e-08</td>
  1056. <td align="left">2.5e-08</td>
  1057. <td align="left"><code style="font-size: x-large;">GCGGTAAAAAT</code></td>
  1058. </tr>
  1059. <tr>
  1060. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1061. <td align="left">phiX174</td>
  1062. <td align="left">2922</td>
  1063. <td align="left">2932</td>
  1064. <td align="left">7.78e-08</td>
  1065. <td align="left">2.6e-08</td>
  1066. <td align="left"><code style="font-size: x-large;">AGGTGATTTAT</code></td>
  1067. </tr>
  1068. <tr>
  1069. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1070. <td align="left">phiX174</td>
  1071. <td align="left">2447</td>
  1072. <td align="left">2457</td>
  1073. <td align="left">8.12e-08</td>
  1074. <td align="left">2.66e-08</td>
  1075. <td align="left"><code style="font-size: x-large;">TGGTTCTCACT</code></td>
  1076. </tr>
  1077. <tr>
  1078. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1079. <td align="left">phiX174</td>
  1080. <td align="left">3487</td>
  1081. <td align="left">3497</td>
  1082. <td align="left">8.12e-08</td>
  1083. <td align="left">2.66e-08</td>
  1084. <td align="left"><code style="font-size: x-large;">AGAATACGAAA</code></td>
  1085. </tr>
  1086. <tr>
  1087. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1088. <td align="left">phiX174</td>
  1089. <td align="left">991</td>
  1090. <td align="left">1001</td>
  1091. <td align="left">8.47e-08</td>
  1092. <td align="left">2.7e-08</td>
  1093. <td align="left"><code style="font-size: x-large;">AGGATAAATTA</code></td>
  1094. </tr>
  1095. <tr>
  1096. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1097. <td align="left">phiX174</td>
  1098. <td align="left">996</td>
  1099. <td align="left">1006</td>
  1100. <td align="left">8.47e-08</td>
  1101. <td align="left">2.7e-08</td>
  1102. <td align="left"><code style="font-size: x-large;">AAATTATGTCT</code></td>
  1103. </tr>
  1104. <tr>
  1105. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1106. <td align="left">phiX174</td>
  1107. <td align="left">1384</td>
  1108. <td align="left">1394</td>
  1109. <td align="left">8.47e-08</td>
  1110. <td align="left">2.7e-08</td>
  1111. <td align="left"><code style="font-size: x-large;">TTTGAATATCT</code></td>
  1112. </tr>
  1113. <tr>
  1114. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1115. <td align="left">phiX174</td>
  1116. <td align="left">3374</td>
  1117. <td align="left">3384</td>
  1118. <td align="left">8.81e-08</td>
  1119. <td align="left">2.74e-08</td>
  1120. <td align="left"><code style="font-size: x-large;">TGAGAATCAAA</code></td>
  1121. </tr>
  1122. <tr>
  1123. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1124. <td align="left">phiX174</td>
  1125. <td align="left">4976</td>
  1126. <td align="left">4986</td>
  1127. <td align="left">8.81e-08</td>
  1128. <td align="left">2.74e-08</td>
  1129. <td align="left"><code style="font-size: x-large;">TAAAGCTACCA</code></td>
  1130. </tr>
  1131. <tr>
  1132. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1133. <td align="left">phiX174</td>
  1134. <td align="left">5253</td>
  1135. <td align="left">5263</td>
  1136. <td align="left">8.81e-08</td>
  1137. <td align="left">2.74e-08</td>
  1138. <td align="left"><code style="font-size: x-large;">AACGCAAAAAG</code></td>
  1139. </tr>
  1140. <tr>
  1141. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1142. <td align="left">phiX174</td>
  1143. <td align="left">377</td>
  1144. <td align="left">387</td>
  1145. <td align="left">9.18e-08</td>
  1146. <td align="left">2.83e-08</td>
  1147. <td align="left"><code style="font-size: x-large;">TAGGTAAGAAA</code></td>
  1148. </tr>
  1149. <tr>
  1150. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1151. <td align="left">phiX174</td>
  1152. <td align="left">3527</td>
  1153. <td align="left">3537</td>
  1154. <td align="left">9.55e-08</td>
  1155. <td align="left">2.89e-08</td>
  1156. <td align="left"><code style="font-size: x-large;">TGCTTATCAAC</code></td>
  1157. </tr>
  1158. <tr>
  1159. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1160. <td align="left">phiX174</td>
  1161. <td align="left">3774</td>
  1162. <td align="left">3784</td>
  1163. <td align="left">9.55e-08</td>
  1164. <td align="left">2.89e-08</td>
  1165. <td align="left"><code style="font-size: x-large;">GATATTTCTAA</code></td>
  1166. </tr>
  1167. <tr>
  1168. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1169. <td align="left">phiX174</td>
  1170. <td align="left">1026</td>
  1171. <td align="left">1036</td>
  1172. <td align="left">9.98e-08</td>
  1173. <td align="left">2.97e-08</td>
  1174. <td align="left"><code style="font-size: x-large;">AGCGTATGCCG</code></td>
  1175. </tr>
  1176. <tr>
  1177. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1178. <td align="left">phiX174</td>
  1179. <td align="left">2316</td>
  1180. <td align="left">2326</td>
  1181. <td align="left">9.98e-08</td>
  1182. <td align="left">2.97e-08</td>
  1183. <td align="left"><code style="font-size: x-large;">AGCGGTAAAAA</code></td>
  1184. </tr>
  1185. <tr>
  1186. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1187. <td align="left">phiX174</td>
  1188. <td align="left">4305</td>
  1189. <td align="left">4315</td>
  1190. <td align="left">1.04e-07</td>
  1191. <td align="left">3.06e-08</td>
  1192. <td align="left"><code style="font-size: x-large;">GATATTAATAA</code></td>
  1193. </tr>
  1194. <tr>
  1195. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1196. <td align="left">phiX174</td>
  1197. <td align="left">5187</td>
  1198. <td align="left">5197</td>
  1199. <td align="left">1.04e-07</td>
  1200. <td align="left">3.06e-08</td>
  1201. <td align="left"><code style="font-size: x-large;">GAGTGCTTAAT</code></td>
  1202. </tr>
  1203. <tr>
  1204. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1205. <td align="left">phiX174</td>
  1206. <td align="left">2751</td>
  1207. <td align="left">2761</td>
  1208. <td align="left">1.09e-07</td>
  1209. <td align="left">3.12e-08</td>
  1210. <td align="left"><code style="font-size: x-large;">TTATTATACCG</code></td>
  1211. </tr>
  1212. <tr>
  1213. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1214. <td align="left">phiX174</td>
  1215. <td align="left">3442</td>
  1216. <td align="left">3452</td>
  1217. <td align="left">1.09e-07</td>
  1218. <td align="left">3.12e-08</td>
  1219. <td align="left"><code style="font-size: x-large;">AGACTCAAAAA</code></td>
  1220. </tr>
  1221. <tr>
  1222. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1223. <td align="left">phiX174</td>
  1224. <td align="left">5056</td>
  1225. <td align="left">5066</td>
  1226. <td align="left">1.09e-07</td>
  1227. <td align="left">3.12e-08</td>
  1228. <td align="left"><code style="font-size: x-large;">AAGGTCTAGGA</code></td>
  1229. </tr>
  1230. <tr>
  1231. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1232. <td align="left">phiX174</td>
  1233. <td align="left">341</td>
  1234. <td align="left">351</td>
  1235. <td align="left">1.15e-07</td>
  1236. <td align="left">3.15e-08</td>
  1237. <td align="left"><code style="font-size: x-large;">GATTACTATCT</code></td>
  1238. </tr>
  1239. <tr>
  1240. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1241. <td align="left">phiX174</td>
  1242. <td align="left">561</td>
  1243. <td align="left">571</td>
  1244. <td align="left">1.15e-07</td>
  1245. <td align="left">3.15e-08</td>
  1246. <td align="left"><code style="font-size: x-large;">TGCGTTTATGG</code></td>
  1247. </tr>
  1248. <tr>
  1249. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1250. <td align="left">phiX174</td>
  1251. <td align="left">1378</td>
  1252. <td align="left">1388</td>
  1253. <td align="left">1.15e-07</td>
  1254. <td align="left">3.15e-08</td>
  1255. <td align="left"><code style="font-size: x-large;">GGGTTATTTGA</code></td>
  1256. </tr>
  1257. <tr>
  1258. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1259. <td align="left">phiX174</td>
  1260. <td align="left">1581</td>
  1261. <td align="left">1591</td>
  1262. <td align="left">1.15e-07</td>
  1263. <td align="left">3.15e-08</td>
  1264. <td align="left"><code style="font-size: x-large;">TGGGTCTGCAA</code></td>
  1265. </tr>
  1266. <tr>
  1267. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1268. <td align="left">phiX174</td>
  1269. <td align="left">2281</td>
  1270. <td align="left">2291</td>
  1271. <td align="left">1.15e-07</td>
  1272. <td align="left">3.15e-08</td>
  1273. <td align="left"><code style="font-size: x-large;">GTGATAAAAGA</code></td>
  1274. </tr>
  1275. <tr>
  1276. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1277. <td align="left">phiX174</td>
  1278. <td align="left">3909</td>
  1279. <td align="left">3919</td>
  1280. <td align="left">1.2e-07</td>
  1281. <td align="left">3.24e-08</td>
  1282. <td align="left"><code style="font-size: x-large;">AGGAAATAACC</code></td>
  1283. </tr>
  1284. <tr>
  1285. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1286. <td align="left">phiX174</td>
  1287. <td align="left">4187</td>
  1288. <td align="left">4197</td>
  1289. <td align="left">1.2e-07</td>
  1290. <td align="left">3.24e-08</td>
  1291. <td align="left"><code style="font-size: x-large;">TGGTGATATGT</code></td>
  1292. </tr>
  1293. <tr>
  1294. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1295. <td align="left">phiX174</td>
  1296. <td align="left">5151</td>
  1297. <td align="left">5161</td>
  1298. <td align="left">1.25e-07</td>
  1299. <td align="left">3.36e-08</td>
  1300. <td align="left"><code style="font-size: x-large;">GGGATGAAAAT</code></td>
  1301. </tr>
  1302. <tr>
  1303. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1304. <td align="left">phiX174</td>
  1305. <td align="left">3082</td>
  1306. <td align="left">3092</td>
  1307. <td align="left">1.3e-07</td>
  1308. <td align="left">3.41e-08</td>
  1309. <td align="left"><code style="font-size: x-large;">GTATTAAATCT</code></td>
  1310. </tr>
  1311. <tr>
  1312. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1313. <td align="left">phiX174</td>
  1314. <td align="left">3175</td>
  1315. <td align="left">3185</td>
  1316. <td align="left">1.3e-07</td>
  1317. <td align="left">3.41e-08</td>
  1318. <td align="left"><code style="font-size: x-large;">GACTTCTTGAA</code></td>
  1319. </tr>
  1320. <tr>
  1321. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1322. <td align="left">phiX174</td>
  1323. <td align="left">4147</td>
  1324. <td align="left">4157</td>
  1325. <td align="left">1.3e-07</td>
  1326. <td align="left">3.41e-08</td>
  1327. <td align="left"><code style="font-size: x-large;">AGATTCTGTCT</code></td>
  1328. </tr>
  1329. <tr>
  1330. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1331. <td align="left">phiX174</td>
  1332. <td align="left">1653</td>
  1333. <td align="left">1663</td>
  1334. <td align="left">1.35e-07</td>
  1335. <td align="left">3.49e-08</td>
  1336. <td align="left"><code style="font-size: x-large;">ATGTTATTTCT</code></td>
  1337. </tr>
  1338. <tr>
  1339. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1340. <td align="left">phiX174</td>
  1341. <td align="left">3507</td>
  1342. <td align="left">3517</td>
  1343. <td align="left">1.35e-07</td>
  1344. <td align="left">3.49e-08</td>
  1345. <td align="left"><code style="font-size: x-large;">TATGCACAAAA</code></td>
  1346. </tr>
  1347. <tr>
  1348. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1349. <td align="left">phiX174</td>
  1350. <td align="left">4528</td>
  1351. <td align="left">4538</td>
  1352. <td align="left">1.4e-07</td>
  1353. <td align="left">3.54e-08</td>
  1354. <td align="left"><code style="font-size: x-large;">GTTTGATGAAT</code></td>
  1355. </tr>
  1356. <tr>
  1357. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1358. <td align="left">phiX174</td>
  1359. <td align="left">4592</td>
  1360. <td align="left">4602</td>
  1361. <td align="left">1.4e-07</td>
  1362. <td align="left">3.54e-08</td>
  1363. <td align="left"><code style="font-size: x-large;">GTTGGCTGACG</code></td>
  1364. </tr>
  1365. <tr>
  1366. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1367. <td align="left">phiX174</td>
  1368. <td align="left">5351</td>
  1369. <td align="left">5361</td>
  1370. <td align="left">1.4e-07</td>
  1371. <td align="left">3.54e-08</td>
  1372. <td align="left"><code style="font-size: x-large;">CGCTTCGATAA</code></td>
  1373. </tr>
  1374. <tr>
  1375. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1376. <td align="left">phiX174</td>
  1377. <td align="left">2716</td>
  1378. <td align="left">2726</td>
  1379. <td align="left">1.45e-07</td>
  1380. <td align="left">3.59e-08</td>
  1381. <td align="left"><code style="font-size: x-large;">GATGTTTATCC</code></td>
  1382. </tr>
  1383. <tr>
  1384. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1385. <td align="left">phiX174</td>
  1386. <td align="left">3215</td>
  1387. <td align="left">3225</td>
  1388. <td align="left">1.45e-07</td>
  1389. <td align="left">3.59e-08</td>
  1390. <td align="left"><code style="font-size: x-large;">TTCTGATAAGT</code></td>
  1391. </tr>
  1392. <tr>
  1393. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1394. <td align="left">phiX174</td>
  1395. <td align="left">125</td>
  1396. <td align="left">135</td>
  1397. <td align="left">1.5e-07</td>
  1398. <td align="left">3.59e-08</td>
  1399. <td align="left"><code style="font-size: x-large;">GGCGGAAAATG</code></td>
  1400. </tr>
  1401. <tr>
  1402. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1403. <td align="left">phiX174</td>
  1404. <td align="left">323</td>
  1405. <td align="left">333</td>
  1406. <td align="left">1.5e-07</td>
  1407. <td align="left">3.59e-08</td>
  1408. <td align="left"><code style="font-size: x-large;">ACATTTTAAAA</code></td>
  1409. </tr>
  1410. <tr>
  1411. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1412. <td align="left">phiX174</td>
  1413. <td align="left">717</td>
  1414. <td align="left">727</td>
  1415. <td align="left">1.5e-07</td>
  1416. <td align="left">3.59e-08</td>
  1417. <td align="left"><code style="font-size: x-large;">GGCGTCGAGCG</code></td>
  1418. </tr>
  1419. <tr>
  1420. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1421. <td align="left">phiX174</td>
  1422. <td align="left">2234</td>
  1423. <td align="left">2244</td>
  1424. <td align="left">1.5e-07</td>
  1425. <td align="left">3.59e-08</td>
  1426. <td align="left"><code style="font-size: x-large;">ACCGTTTATCG</code></td>
  1427. </tr>
  1428. <tr>
  1429. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1430. <td align="left">phiX174</td>
  1431. <td align="left">2499</td>
  1432. <td align="left">2509</td>
  1433. <td align="left">1.5e-07</td>
  1434. <td align="left">3.59e-08</td>
  1435. <td align="left"><code style="font-size: x-large;">TAAAGCTACAT</code></td>
  1436. </tr>
  1437. <tr>
  1438. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1439. <td align="left">phiX174</td>
  1440. <td align="left">3718</td>
  1441. <td align="left">3728</td>
  1442. <td align="left">1.5e-07</td>
  1443. <td align="left">3.59e-08</td>
  1444. <td align="left"><code style="font-size: x-large;">ATCAGCAAACG</code></td>
  1445. </tr>
  1446. <tr>
  1447. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1448. <td align="left">phiX174</td>
  1449. <td align="left">207</td>
  1450. <td align="left">217</td>
  1451. <td align="left">1.55e-07</td>
  1452. <td align="left">3.64e-08</td>
  1453. <td align="left"><code style="font-size: x-large;">TCTGTCAAAAA</code></td>
  1454. </tr>
  1455. <tr>
  1456. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1457. <td align="left">phiX174</td>
  1458. <td align="left">3542</td>
  1459. <td align="left">3552</td>
  1460. <td align="left">1.55e-07</td>
  1461. <td align="left">3.64e-08</td>
  1462. <td align="left"><code style="font-size: x-large;">GGAGTCTACTG</code></td>
  1463. </tr>
  1464. <tr>
  1465. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1466. <td align="left">phiX174</td>
  1467. <td align="left">5158</td>
  1468. <td align="left">5168</td>
  1469. <td align="left">1.55e-07</td>
  1470. <td align="left">3.64e-08</td>
  1471. <td align="left"><code style="font-size: x-large;">AAATGCTCACA</code></td>
  1472. </tr>
  1473. <tr>
  1474. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1475. <td align="left">phiX174</td>
  1476. <td align="left">469</td>
  1477. <td align="left">479</td>
  1478. <td align="left">1.61e-07</td>
  1479. <td align="left">3.69e-08</td>
  1480. <td align="left"><code style="font-size: x-large;">TGGATTTAACC</code></td>
  1481. </tr>
  1482. <tr>
  1483. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1484. <td align="left">phiX174</td>
  1485. <td align="left">493</td>
  1486. <td align="left">503</td>
  1487. <td align="left">1.61e-07</td>
  1488. <td align="left">3.69e-08</td>
  1489. <td align="left"><code style="font-size: x-large;">ATTTTCTGACG</code></td>
  1490. </tr>
  1491. <tr>
  1492. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1493. <td align="left">phiX174</td>
  1494. <td align="left">1799</td>
  1495. <td align="left">1809</td>
  1496. <td align="left">1.61e-07</td>
  1497. <td align="left">3.69e-08</td>
  1498. <td align="left"><code style="font-size: x-large;">CAGACCTATAA</code></td>
  1499. </tr>
  1500. <tr>
  1501. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1502. <td align="left">phiX174</td>
  1503. <td align="left">3101</td>
  1504. <td align="left">3111</td>
  1505. <td align="left">1.61e-07</td>
  1506. <td align="left">3.69e-08</td>
  1507. <td align="left"><code style="font-size: x-large;">AGGCTCTAATG</code></td>
  1508. </tr>
  1509. <tr>
  1510. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1511. <td align="left">phiX174</td>
  1512. <td align="left">948</td>
  1513. <td align="left">958</td>
  1514. <td align="left">1.67e-07</td>
  1515. <td align="left">3.76e-08</td>
  1516. <td align="left"><code style="font-size: x-large;">GTGGTCAACAA</code></td>
  1517. </tr>
  1518. <tr>
  1519. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1520. <td align="left">phiX174</td>
  1521. <td align="left">1449</td>
  1522. <td align="left">1459</td>
  1523. <td align="left">1.67e-07</td>
  1524. <td align="left">3.76e-08</td>
  1525. <td align="left"><code style="font-size: x-large;">ATGAGCTTAAT</code></td>
  1526. </tr>
  1527. <tr>
  1528. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1529. <td align="left">phiX174</td>
  1530. <td align="left">3385</td>
  1531. <td align="left">3395</td>
  1532. <td align="left">1.67e-07</td>
  1533. <td align="left">3.76e-08</td>
  1534. <td align="left"><code style="font-size: x-large;">AAGAGCTTACT</code></td>
  1535. </tr>
  1536. <tr>
  1537. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1538. <td align="left">phiX174</td>
  1539. <td align="left">482</td>
  1540. <td align="left">492</td>
  1541. <td align="left">1.74e-07</td>
  1542. <td align="left">3.83e-08</td>
  1543. <td align="left"><code style="font-size: x-large;">AGATGATTTCG</code></td>
  1544. </tr>
  1545. <tr>
  1546. <td align="left"><a name="occurrences_phiX174">1</a></td>
  1547. <td align="left">phiX174</td>
  1548. <td align="left">2936</td>
  1549. <td align="left">2946</td>
  1550. <td align="left">1.74e-07</td>
  1551. <td align="left">3.83

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