/test-data/rgtestouts/rgGRR/rgGRRtest1.svg
SVG | 770 lines | 727 code | 30 blank | 13 comment | 2 complexity | f0540ee6eeb652bae92cc9275f1a23f8 MD5 | raw file
1<?xml version="1.0" standalone="no"?> 2<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.2//EN" "http://www.w3.org/Graphics/SVG/1.2/DTD/svg12.dtd"> 3 4<svg width="1280" height="800" 5 xmlns="http://www.w3.org/2000/svg" version="1.2" 6 xmlns:xlink="http://www.w3.org/1999/xlink" viewBox="0 0 1280 800" onload="init()"> 7 8 <script type="text/ecmascript" xlink:href="/static/scripts/checkbox_and_radiobutton.js"/> 9 <script type="text/ecmascript" xlink:href="/static/scripts/helper_functions.js"/> 10 <script type="text/ecmascript" xlink:href="/static/scripts/timer.js"/> 11 <script type="text/ecmascript"> 12 <![CDATA[ 13 var checkBoxes = new Array(); 14 var radioGroupBandwidth; 15 var colours = ['cyan','dodgerblue','mediumpurple','forestgreen','lightgreen','gold','gray']; 16 function init() { 17 var style = {"font-family":"Arial,Helvetica", "fill":"black", "font-size":12}; 18 var dist = 12; 19 var yOffset = 4; 20 21 //A checkBox for each relationship type dupe,parentchild,sibpair,halfsib,parents,unrel,unkn 22 checkBoxes["dupe"] = new checkBox("dupe","checkboxes",20,40,"cbRect","cbCross",true,"Duplicate",style,dist,yOffset,undefined,hideShowLayer); 23 checkBoxes["parentchild"] = new checkBox("parentchild","checkboxes",20,60,"cbRect","cbCross",true,"Parent-Child",style,dist,yOffset,undefined,hideShowLayer); 24 checkBoxes["sibpairs"] = new checkBox("sibpairs","checkboxes",20,80,"cbRect","cbCross",true,"Sib-pairs",style,dist,yOffset,undefined,hideShowLayer); 25 checkBoxes["halfsibs"] = new checkBox("halfsibs","checkboxes",20,100,"cbRect","cbCross",true,"Half-sibs",style,dist,yOffset,undefined,hideShowLayer); 26 checkBoxes["parents"] = new checkBox("parents","checkboxes",20,120,"cbRect","cbCross",true,"Parents",style,dist,yOffset,undefined,hideShowLayer); 27 checkBoxes["unrelated"] = new checkBox("unrelated","checkboxes",20,140,"cbRect","cbCross",true,"Unrelated",style,dist,yOffset,undefined,hideShowLayer); 28 checkBoxes["unknown"] = new checkBox("unknown","checkboxes",20,160,"cbRect","cbCross",true,"Unknown",style,dist,yOffset,undefined,hideShowLayer); 29 30 } 31 32 function hideShowLayer(id, status, label) { 33 var vis = "hidden"; 34 if (status) { 35 vis = "visible"; 36 } 37 document.getElementById(id).setAttributeNS(null, 'visibility', vis); 38 } 39 40 function showBTT(evt, rel, mm, dm, md, dd, n, mg, dg, lg, hg) { 41 var x = parseInt(evt.pageX)-250; 42 var y = parseInt(evt.pageY)-110; 43 switch(rel) { 44 case 0: 45 fill = colours[rel]; 46 relt = "dupe"; 47 break; 48 case 1: 49 fill = colours[rel]; 50 relt = "parentchild"; 51 break; 52 case 2: 53 fill = colours[rel]; 54 relt = "sibpairs"; 55 break; 56 case 3: 57 fill = colours[rel]; 58 relt = "halfsibs"; 59 break; 60 case 4: 61 fill = colours[rel]; 62 relt = "parents"; 63 break; 64 case 5: 65 fill = colours[rel]; 66 relt = "unrelated"; 67 break; 68 case 6: 69 fill = colours[rel]; 70 relt = "unknown"; 71 break; 72 default: 73 fill = "cyan"; 74 relt = "ERROR_CODE: "+rel; 75 } 76 77 document.getElementById("btRel").textContent = "GROUP: "+relt; 78 document.getElementById("btMean").textContent = "mean="+mm+" +/- "+dm; 79 document.getElementById("btSdev").textContent = "sdev="+dm+" +/- "+dd; 80 document.getElementById("btPair").textContent = "npairs="+n; 81 document.getElementById("btGeno").textContent = "ngenos="+mg+" +/- "+dg+" (min="+lg+", max="+hg+")"; 82 document.getElementById("btHead").setAttribute('fill', fill); 83 84 var tt = document.getElementById("btTip"); 85 tt.setAttribute("transform", "translate("+x+","+y+")"); 86 tt.setAttribute('visibility', 'visible'); 87 } 88 89 function showOTT(evt, rel, s1, s2, mean, sdev, ngeno, rmean, rsdev) { 90 var x = parseInt(evt.pageX)-150; 91 var y = parseInt(evt.pageY)-180; 92 93 switch(rel) { 94 case 0: 95 fill = colours[rel]; 96 relt = "dupe"; 97 break; 98 case 1: 99 fill = colours[rel]; 100 relt = "parentchild"; 101 break; 102 case 2: 103 fill = colours[rel]; 104 relt = "sibpairs"; 105 break; 106 case 3: 107 fill = colours[rel]; 108 relt = "halfsibs"; 109 break; 110 case 4: 111 fill = colours[rel]; 112 relt = "parents"; 113 break; 114 case 5: 115 fill = colours[rel]; 116 relt = "unrelated"; 117 break; 118 case 6: 119 fill = colours[rel]; 120 relt = "unknown"; 121 break; 122 default: 123 fill = "cyan"; 124 relt = "ERROR_CODE: "+rel; 125 } 126 127 document.getElementById("otRel").textContent = "PAIR: "+relt; 128 document.getElementById("otS1").textContent = "s1="+s1; 129 document.getElementById("otS2").textContent = "s2="+s2; 130 document.getElementById("otMean").textContent = "mean="+mean; 131 document.getElementById("otSdev").textContent = "sdev="+sdev; 132 document.getElementById("otGeno").textContent = "ngenos="+ngeno; 133 document.getElementById("otRmean").textContent = "relmean="+rmean; 134 document.getElementById("otRsdev").textContent = "relsdev="+rsdev; 135 document.getElementById("otHead").setAttribute('fill', fill); 136 137 var tt = document.getElementById("otTip"); 138 tt.setAttribute("transform", "translate("+x+","+y+")"); 139 tt.setAttribute('visibility', 'visible'); 140 } 141 142 function hideBTT(evt) { 143 document.getElementById("btTip").setAttributeNS(null, 'visibility', 'hidden'); 144 } 145 146 function hideOTT(evt) { 147 document.getElementById("otTip").setAttributeNS(null, 'visibility', 'hidden'); 148 } 149 150 ]]> 151 </script> 152 <defs> 153 <!-- symbols for check boxes --> 154 <symbol id="cbRect" overflow="visible"> 155 <rect x="-5" y="-5" width="10" height="10" fill="white" stroke="dimgray" stroke-width="1" cursor="pointer"/> 156 </symbol> 157 <symbol id="cbCross" overflow="visible"> 158 <g pointer-events="none" stroke="black" stroke-width="1"> 159 <line x1="-3" y1="-3" x2="3" y2="3"/> 160 <line x1="3" y1="-3" x2="-3" y2="3"/> 161 </g> 162 </symbol> 163 </defs> 164 165<desc>Developer Works Dynamic Scatter Graph Scaling Example</desc> 166 167<!-- Now Draw the main X and Y axis --> 168<g style="stroke-width:1.0; stroke:black; shape-rendering:crispEdges"> 169 <!-- X Axis top and bottom --> 170 <path d="M 100 100 L 1250 100 Z"/> 171 <path d="M 100 700 L 1250 700 Z"/> 172 173 <!-- Y Axis left and right --> 174 <path d="M 100 100 L 100 700 Z"/> 175 <path d="M 1250 100 L 1250 700 Z"/> 176</g> 177 178<g transform="translate(100,100)"> 179 180 <!-- Grid Lines --> 181 <g style="fill:none; stroke:#dddddd; stroke-width:1; stroke-dasharray:2,2; text-anchor:end; shape-rendering:crispEdges"> 182 183 <!-- Vertical grid lines --> 184 <line x1="125" y1="0" x2="115" y2="600" /> 185 <line x1="230" y1="0" x2="230" y2="600" /> 186 <line x1="345" y1="0" x2="345" y2="600" /> 187 <line x1="460" y1="0" x2="460" y2="600" /> 188 <line x1="575" y1="0" x2="575" y2="600" style="stroke-dasharray:none;" /> 189 <line x1="690" y1="0" x2="690" y2="600" /> 190 <line x1="805" y1="0" x2="805" y2="600" /> 191 <line x1="920" y1="0" x2="920" y2="600" /> 192 <line x1="1035" y1="0" x2="1035" y2="600" /> 193 194 <!-- Horizontal grid lines --> 195 <line x1="0" y1="60" x2="1150" y2="60" /> 196 <line x1="0" y1="120" x2="1150" y2="120" /> 197 <line x1="0" y1="180" x2="1150" y2="180" /> 198 <line x1="0" y1="240" x2="1150" y2="240" /> 199 <line x1="0" y1="300" x2="1150" y2="300" style="stroke-dasharray:none;" /> 200 <line x1="0" y1="360" x2="1150" y2="360" /> 201 <line x1="0" y1="420" x2="1150" y2="420" /> 202 <line x1="0" y1="480" x2="1150" y2="480" /> 203 <line x1="0" y1="540" x2="1150" y2="540" /> 204 </g> 205 206 <!-- Legend --> 207 <g style="fill:black; stroke:none" font-size="12" font-family="Arial" transform="translate(25,25)"> 208 <rect width="160" height="270" style="fill:none; stroke:black; shape-rendering:crispEdges" /> 209 <text x="5" y="20" style="fill:black; stroke:none;" font-size="13" font-weight="bold">Given Pair Relationship</text> 210 <rect x="120" y="35" width="10" height="10" fill="cyan" stroke="cyan" stroke-width="1" cursor="pointer"/> 211 <rect x="120" y="55" width="10" height="10" fill="dodgerblue" stroke="dodgerblue" stroke-width="1" cursor="pointer"/> 212 <rect x="120" y="75" width="10" height="10" fill="mediumpurple" stroke="mediumpurple" stroke-width="1" cursor="pointer"/> 213 <rect x="120" y="95" width="10" height="10" fill="forestgreen" stroke="forestgreen" stroke-width="1" cursor="pointer"/> 214 <rect x="120" y="115" width="10" height="10" fill="lightgreen" stroke="lightgreen" stroke-width="1" cursor="pointer"/> 215 <rect x="120" y="135" width="10" height="10" fill="gold" stroke="gold" stroke-width="1" cursor="pointer"/> 216 <rect x="120" y="155" width="10" height="10" fill="gray" stroke="gray" stroke-width="1" cursor="pointer"/> 217 <text x="15" y="195" style="fill:black; stroke:none" font-size="12" font-family="Arial" >Zscore gt 15</text> 218 <circle cx="125" cy="192" r="6" style="stroke:red; fill:gold; fill-opacity:1.0; stroke-width:1;"/> 219 <text x="15" y="215" style="fill:black; stroke:none" font-size="12" font-family="Arial" >Zscore 4 to 15</text> 220 <circle cx="125" cy="212" r="3" style="stroke:gold; fill:gold; fill-opacity:1.0; stroke-width:1;"/> 221 <text x="15" y="235" style="fill:black; stroke:none" font-size="12" font-family="Arial" >Zscore lt 4</text> 222 <circle cx="125" cy="232" r="2" style="stroke:gold; fill:gold; fill-opacity:1.0; stroke-width:1;"/> 223 <g id="checkboxes"> 224 </g> 225 </g> 226 227 228 <g style='fill:black; stroke:none' font-size="17" font-family="Arial"> 229 <!-- X Axis Labels --> 230 <text x="480" y="660">Mean Alleles Shared</text> 231 <text x="0" y="630" >1.0</text> 232 <text x="277" y="630" >1.25</text> 233 <text x="564" y="630" >1.5</text> 234 <text x="842" y="630" >1.75</text> 235 <text x="1140" y="630" >2.0</text> 236 </g> 237 238 <g transform="rotate(270)" style="fill:black; stroke:none" font-size="17" font-family="Arial"> 239 <!-- Y Axis Labels --> 240 <text x="-350" y="-40">SD Alleles Shared</text> 241 <text x="-20" y="-10" >1.0</text> 242 <text x="-165" y="-10" >0.75</text> 243 <text x="-310" y="-10" >0.5</text> 244 <text x="-455" y="-10" >0.25</text> 245 <text x="-600" y="-10" >0.0</text> 246 </g> 247 248<!-- Plot Title --> 249<g style="fill:black; stroke:none" font-size="18" font-family="Arial"> 250 <text x="425" y="-30">rgGRRtest1 (40 subjects, 25 snp)</text> 251</g> 252 253<!-- One group/layer of points for each relationship type --> 254<g id="unrelated" style="stroke:gold; fill:gold; fill-opacity:1.0; stroke-width:1;" cursor="pointer"> 255<circle cx="276" cy="202" r="2" 256 onmouseover="showBTT(evt, 5, 1.24, 0.00, 0.66, 0.00, 2, 2, 0, 2, 2)" 257 onmouseout="hideBTT(evt)" /> 258<circle cx="479" cy="134" r="2" 259 onmouseover="showBTT(evt, 5, 1.42, 0.00, 0.78, 0.00, 2, 2, 0, 2, 2)" 260 onmouseout="hideBTT(evt)" /> 261<circle cx="874" cy="338" r="2" 262 onmouseover="showBTT(evt, 5, 1.76, 0.00, 0.44, 0.00, 12, 2, 0, 2, 2)" 263 onmouseout="hideBTT(evt)" /> 264<circle cx="230" cy="212" r="2" 265 onmouseover="showBTT(evt, 5, 1.20, 0.00, 0.65, 0.00, 7, 2, 0, 2, 2)" 266 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