/test-data/rgtestouts/rgHaploView/rgHaploViewtest1.ped.TAGS

https://bitbucket.org/cistrome/cistrome-harvard/ · Unknown · 25 lines · 24 code · 1 blank · 0 comment · 0 complexity · 2bb215c33f306bdc16131cb51ab74bbc MD5 · raw file

  1. #captured 10 of 10 alleles at r^2 >= 0.8
  2. #captured 100 percent of alleles with mean r^2 of 1.0
  3. #using 9 Tag SNPs in 9 tests.
  4. Allele Best Test r^2 w/test
  5. rs2283802 rs2283802 1.0
  6. rs2267000 rs2267000 1.0
  7. rs16997606 rs16997606 1.0
  8. rs4820537 rs4820537 1.0
  9. rs3788347 rs3788347 1.0
  10. rs756632 rs756632 1.0
  11. rs4820539 rs4820539 1.0
  12. rs2283804 rs2283804 1.0
  13. rs2267006 rs2283804 1.0
  14. rs4822363 rs4822363 1.0
  15. Test Alleles Captured
  16. rs2283804 rs2267006,rs2283804
  17. rs756632 rs756632
  18. rs4820539 rs4820539
  19. rs16997606 rs16997606
  20. rs4822363 rs4822363
  21. rs2267000 rs2267000
  22. rs3788347 rs3788347
  23. rs4820537 rs4820537
  24. rs2283802 rs2283802