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/test-data/rgtestouts/rgPedSub/rgPedSubtest1.log

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 12 lines | 11 code | 1 blank | 0 comment | 0 complexity | 5982851e63591d8d7fed03dd649f8fce MD5 | raw file
 1config file /share/shared/galaxy/test-data/rgtestouts/rgPedSub/pedsub.script = 
 2title~~~~rgPedSubtest1
 3output1~~~~/share/shared/galaxy/test-data/rgtestouts/rgPedSub/rgPedSubtest1.lped
 4outformat~~~~lped
 5basename~~~~tinywga
 6inped~~~~/share/shared/galaxy/test-data/tinywga
 7outdir~~~~/share/shared/galaxy/test-data/rgtestouts/rgPedSub
 8region~~~~
 9relfilter~~~~all
10rslist~~~~rs2283802Xrs2267000Xrs16997606Xrs4820537Xrs3788347Xrs756632Xrs4820539Xrs2283804Xrs2267006Xrs4822363X
11## rgPedSub.py looking for 10 rs (['rs2283802', 'rs2267000', 'rs16997606', 'rs4820537', 'rs3788347']....etc)
12