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/test-data/rgtestouts/rgQC/MarkerDetails_rgQCtest1.xls

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 26 lines | 26 code | 0 blank | 0 comment | 0 complexity | 8689b03ee65ca0aaf1ad14f9c24c2743 MD5 | raw file
 1snp	chromosome	offset	maf	a1	a2	missfrac	p_hwe_all	logp_hwe_all	p_hwe_unaff	logp_hwe_unaff	N_Mendel
 2rs2283802	22	21784722	0.2593	4	2	0	0.638	0.195179	0.638	0.195179	0
 3rs2267000	22	21785366	0.4259	4	2	0	1	0	1	0	0
 4rs16997606	22	21794754	0.1111	1	3	0	1	0	1	0	0
 5rs4820537	22	21794810	0.4444	1	3	0	0.6985	0.155834	0.6985	0.155834	0
 6rs3788347	22	21797804	0.463	3	1	0	1	0	1	0	0
 7rs756632	22	21799918	0.09259	4	2	0	1	0	1	0	0
 8rs4820539	22	21807970	0.2778	1	3	0	0.6298	0.200797	0.6298	0.200797	0
 9rs2283804	22	21820335	0.3333	1	2	0	1	0	1	0	0
10rs2267006	22	21820990	0.3333	3	1	0	1	0	1	0	0
11rs4822363	22	21821000	0.07407	4	2	0	1	0	1	0	0
12rs5751592	22	21827674	0.1667	4	2	0	1	0	1	0	0
13rs5759608	22	21832708	0.4259	2	4	0	1	0	1	0	0
14rs5759612	22	21833170	0.4259	3	1	0	1	0	1	0	0
15rs2267009	22	21860168	0.2593	3	4	0	0.638	0.195179	0.638	0.195179	0
16rs2267010	22	21864366	0.03704	3	1	0	1	0	1	0	0
17rs5759636	22	21868698	0.07407	4	2	0.025	1	0	1	0	0
18rs2071436	22	21871488	0.2593	4	2	0	0.638	0.195179	0.638	0.195179	0
19rs2267013	22	21875879	0.1111	3	1	0	1	0	1	0	0
20rs6003566	22	21889806	0.09259	3	1	0	1	0	1	0	0
21rs2256725	22	21892891	0.1111	2	1	0	1	0	1	0	0
22rs12160770	22	21892925	0.01923	1	3	0.075	1	0	1	0	0
23rs5751611	22	21896019	0.4615	2	4	0.025	0.4275	0.369064	0.4275	0.369064	0
24rs762601	22	21898858	0.3333	1	3	0	0.6657	0.176721	0.6657	0.176721	0
25rs2156921	22	21899063	0.3333	3	1	0	0.6657	0.176721	0.6657	0.176721	0
26rs4822375	22	21905642	0.3333	1	3	0	0.6657	0.176721	0.6657	0.176721	0