/test-data/rgtestouts/rgQC/MarkerDetails_rgQCtest1.xls
Unknown | 26 lines | 26 code | 0 blank | 0 comment | 0 complexity | 8689b03ee65ca0aaf1ad14f9c24c2743 MD5 | raw file
1snp chromosome offset maf a1 a2 missfrac p_hwe_all logp_hwe_all p_hwe_unaff logp_hwe_unaff N_Mendel 2rs2283802 22 21784722 0.2593 4 2 0 0.638 0.195179 0.638 0.195179 0 3rs2267000 22 21785366 0.4259 4 2 0 1 0 1 0 0 4rs16997606 22 21794754 0.1111 1 3 0 1 0 1 0 0 5rs4820537 22 21794810 0.4444 1 3 0 0.6985 0.155834 0.6985 0.155834 0 6rs3788347 22 21797804 0.463 3 1 0 1 0 1 0 0 7rs756632 22 21799918 0.09259 4 2 0 1 0 1 0 0 8rs4820539 22 21807970 0.2778 1 3 0 0.6298 0.200797 0.6298 0.200797 0 9rs2283804 22 21820335 0.3333 1 2 0 1 0 1 0 0 10rs2267006 22 21820990 0.3333 3 1 0 1 0 1 0 0 11rs4822363 22 21821000 0.07407 4 2 0 1 0 1 0 0 12rs5751592 22 21827674 0.1667 4 2 0 1 0 1 0 0 13rs5759608 22 21832708 0.4259 2 4 0 1 0 1 0 0 14rs5759612 22 21833170 0.4259 3 1 0 1 0 1 0 0 15rs2267009 22 21860168 0.2593 3 4 0 0.638 0.195179 0.638 0.195179 0 16rs2267010 22 21864366 0.03704 3 1 0 1 0 1 0 0 17rs5759636 22 21868698 0.07407 4 2 0.025 1 0 1 0 0 18rs2071436 22 21871488 0.2593 4 2 0 0.638 0.195179 0.638 0.195179 0 19rs2267013 22 21875879 0.1111 3 1 0 1 0 1 0 0 20rs6003566 22 21889806 0.09259 3 1 0 1 0 1 0 0 21rs2256725 22 21892891 0.1111 2 1 0 1 0 1 0 0 22rs12160770 22 21892925 0.01923 1 3 0.075 1 0 1 0 0 23rs5751611 22 21896019 0.4615 2 4 0.025 0.4275 0.369064 0.4275 0.369064 0 24rs762601 22 21898858 0.3333 1 3 0 0.6657 0.176721 0.6657 0.176721 0 25rs2156921 22 21899063 0.3333 3 1 0 0.6657 0.176721 0.6657 0.176721 0 26rs4822375 22 21905642 0.3333 1 3 0 0.6657 0.176721 0.6657 0.176721 0