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/lib/galaxy/datatypes/converters/lped_to_fped_converter.xml

https://bitbucket.org/cistrome/cistrome-harvard/
XML | 15 lines | 13 code | 0 blank | 2 comment | 0 complexity | e6a8a53c385453d80ecb344a2308d9d1 MD5 | raw file
  1. <tool id="lped2fpedconvert" name="Convert lped to fped" version="0.01">
  2. <!-- <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> -->
  3. <!-- Used on the metadata edit page. -->
  4. <command interpreter="python">
  5. lped_to_fped_converter.py '$input1.extra_files_path/$input1.metadata.base_name' '$output1' '$output1.files_path'
  6. </command>
  7. <inputs>
  8. <param format="lped" name="input1" type="data" label="Choose linkage pedigree file"/>
  9. </inputs>
  10. <outputs>
  11. <data format="fped" name="output1" metadata_source="input1"/>
  12. </outputs>
  13. <help>
  14. </help>
  15. </tool>