gff_to_tabix_converter.xml

/lib/galaxy/datatypes/converters/gff_to_tabix_converter.xml

https://bitbucket.org/cistrome/cistrome-harvard/
XML | 15 lines | 14 code | 0 blank | 1 comment | 0 complexity | 868db7d342541365e8983f40d4403aa0 MD5 | raw file

 1<tool id="CONVERTER_gff_to_tabix_0" name="Convert GFF to tabix" version="1.0.0" hidden="true">
 2<!--  <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> -->
 3  <command interpreter="python">interval_to_tabix_converter.py -P gff $input1 $bgzip $output1</command>
 4  <inputs>
 5    <page>
 6        <param format="gff" name="input1" type="data" label="Choose GFF file"/>
 7        <param format="bgzip" name="bgzip" type="data" label="BGZIP file"/>
 8    </page>
 9   </inputs>
10  <outputs>
11    <data format="tabix" name="output1"/>
12  </outputs>
13  <help>
14  </help>
15</tool>