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/lib/galaxy/datatypes/converters/interval_to_bedstrict_converter.xml

https://bitbucket.org/cistrome/cistrome-harvard/
XML | 15 lines | 13 code | 0 blank | 2 comment | 0 complexity | 13fcc6d69f0262c81a3936dd27a7865e MD5 | raw file
 1<tool id="CONVERTER_interval_to_bedstrict_0" name="Convert Genomic Intervals To Strict BED">
 2  <!--  <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> -->
 3  <!-- Used on the metadata edit page. -->
 4  <command interpreter="python">interval_to_bedstrict_converter.py $output1 $input1 ${input1.metadata.chromCol} ${input1.metadata.startCol} ${input1.metadata.endCol} ${input1.metadata.strandCol} ${input1.metadata.nameCol} ${input1.extension}</command>
 5  <inputs>
 6    <page>
 7      <param format="interval" name="input1" type="data" label="Choose intervals"/>
 8    </page>
 9   </inputs>
10  <outputs>
11    <data format="bedstrict" name="output1"/>
12  </outputs>
13  <help>
14  </help>
15</tool>