# This is a sample file distributed with Galaxy that enables tools to
# use a directory of sequence length files.  You will need to create these
# sequence length files and then create a gd.chrlens.loc file similar to
# this one (store it in this directory) that points to the directories
# in which these sequence length files are stored.  The gd.chrlens.loc
# file has the following format (white space characters are TAB
# characters):
#
#<species>        <reference_species_file_path>
#
# So, for example, if you used Monodelphis domestica as the reference
# species for a collection of Sarcophilus harrisii SNPs, then the
# gd.chrlens.loc entry would look like this:
#
#tasmanian_devil  /galaxy/data/location/gd/chrlens/mondom_chr_lengths.txt
#
# Your gd.chrlens.loc file should include an entry for each pair of
# species SNPs and reference species.  For example:
#
#bighorn          /galaxy/data/location/gd/chrlens/cow_chr_lengths.txt
#tasmanian_devil  /galaxy/data/location/gd/chrlens/mondom_chr_lengths.txt
#...etc...