/tools/filters/commWrapper.xml
https://bitbucket.org/cistrome/cistrome-harvard/ · XML · 38 lines · 30 code · 8 blank · 0 comment · 0 complexity · 32d7ec418882e4ad4cc594e7cf32147c MD5 · raw file
- <tool id="Comm1" name="Find Similarities and Differences">
- <description>between two datasets</description>
- <command interpreter="perl">commWrapper.pl $input1 $input2 $mode $out_file1</command>
- <inputs>
- <param format="tabular" name="input1" type="data" label="Compare Dataset1"/>
- <param format="tabular" name="input2" type="data" label="with Dataset2"/>
- <param name="mode" type="select" label="And find">
- <option value="-23">Lines unique to Dataset1</option>
- <option value="-12">Lines shared between Dataset1 and Dataset2</option>
- </param>
- </inputs>
- <outputs>
- <data format="input" name="out_file1" metadata_source="input1" />
- </outputs>
- <help>
- This tool is based on UNIX shell command comm. It compares two datasets and returns similarities or differences. For example, if you have two datasets::
-
- a 1
- b 2
- c 3
- and::
- a 1
- f 6
- h 8
- Using this tool with **Lines unique to Dataset1** option will return::
- b 2
- c 3
- If you use **Lines shared between Dataset1 and Dataset2** option output will look like this::
- a 1
- </help>
- </tool>