/tools/data_source/worm_modencode.xml
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- <?xml version="1.0"?>
- <tool name="modENCODE worm" id="modENCODEworm" tool_type="data_source">
- <description>server</description>
- <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
- <inputs action="http://modencode.oicr.on.ca/fgb2/gbrowse/worm" check_values="false" target="_top">
- <display>go to modENCODE worm server $GALAXY_URL</display>
- <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=modENCODEworm" />
- </inputs>
- <request_param_translation>
- <request_param galaxy_name="dbkey" remote_name="dbkey" missing="ce6" >
- <value_translation>
- <value galaxy_value="ce6" remote_value="worm" />
- </value_translation>
- </request_param>
- <request_param galaxy_name="URL" remote_name="URL" missing="">
- <append_param separator="&" first_separator="?" join="=">
- <value name="d" missing="" />
- <value name="dbkey" missing="ce6" />
- <value name="q" missing="" />
- <value name="s" missing="" />
- <value name="t" missing="" />
- </append_param>
- </request_param>
- <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
- <request_param galaxy_name="data_type" remote_name="data_type" missing="auto" />
- </request_param_translation>
- <uihints minwidth="800"/>
- <outputs>
- <data name="output" format="txt" label="${tool.name} on $getVar( 'q', 'unknown position' )"/>
- </outputs>
- <options sanitize="False" refresh="True"/>
- </tool>