<?xml version="1.0"?>

<!--

    If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in

    the initial response.  If value of 'URL_method' is 'post', any additional params coming back in the

    initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.

-->

<tool name="UCSC Test" id="ucsc_table_direct_test1" tool_type="data_source">

    <description>table browser</description>

    <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>

    <inputs action="http://genome-test.cse.ucsc.edu/cgi-bin/hgTables" check_values="false" method="get">

        <display>go to UCSC Table Browser $GALAXY_URL</display>

        <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />

        <param name="tool_id" type="hidden" value="ucsc_table_direct_test1" />

        <param name="sendToGalaxy" type="hidden" value="1" />

        <param name="hgta_compressType" type="hidden" value="none" />

        <param name="hgta_outputType" type="hidden" value="bed" />

    </inputs>

    <request_param_translation>

        <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />

        <request_param galaxy_name="URL" remote_name="URL" missing="" />

        <request_param galaxy_name="dbkey" remote_name="db" missing="?" />

        <request_param galaxy_name="organism" remote_name="org" missing="unknown species" />

        <request_param galaxy_name="table" remote_name="hgta_table" missing="unknown table" />

        <request_param galaxy_name="description" remote_name="hgta_regionType" missing="no description" />

        <request_param galaxy_name="data_type" remote_name="hgta_outputType" missing="auto" >

            <value_translation>

                <value galaxy_value="auto" remote_value="primaryTable" />

                <value galaxy_value="auto" remote_value="selectedFields" />

                <value galaxy_value="wig" remote_value="wigData" />

                <value galaxy_value="interval" remote_value="tab" />

                <value galaxy_value="html" remote_value="hyperlinks" />

                <value galaxy_value="fasta" remote_value="sequence" />

                <value galaxy_value="gtf" remote_value="gff" />

            </value_translation>

        </request_param>

    </request_param_translation>

    <uihints minwidth="800"/>

    <outputs>

        <data name="output" format="tabular" label="${tool.name} on ${organism}: ${table} (#if $description == 'range' then $getVar( 'position', 'unknown position' ) else $description#)"/>

    </outputs>

    <options sanitize="False" refresh="True"/>

</tool>