/tools/regVariation/qv_to_bqv.xml

https://bitbucket.org/cistrome/cistrome-harvard/ · XML · 17 lines · 17 code · 0 blank · 0 comment · 0 complexity · 4762012cae1b45a3c1a556ae582d57f7 MD5 · raw file 

    

  1. <tool id="qv2bqv" name="qv2bqv">
    2. 

  2.   <description></description>
    3. 

  3.   <command interpreter="python">qv_to_bqv.py "$input1" $output</command>
    4. 

  4.   <inputs>
    5. 

  5.     <param name="input1" type="data" format="interval" help="Directory" />
    6. 

  6.    </inputs>
    7. 

  7.   <outputs>
    8. 

  8.     <data format="text" name="output" metadata_source="input1" />
    9. 

  9.   </outputs>
    10. 

  10.   <tests>
    11. 

  11.     <test>
    12. 

  12.       <param name="input1" value="1.bed" />
    13. 

  13.       <param name="input2" value="2.bed" />
    14. 

  14.       <output name="output" file="gops-coverage.dat" />
    15. 

  15.     </test>
    16. 

  16.   </tests>
    17. 

  17. </tool>
    18.