/tools/fasta_tools/fasta_compute_length.py

https://bitbucket.org/cistrome/cistrome-harvard/ · Python · 9 lines · 3 code · 2 blank · 4 comment · 0 complexity · 5b3ebd3224e2238141416e9df8b5bc91 MD5 · raw file 

    

  1. #!/usr/bin/env python
    2. 

  2. """
    3. 

  3. Uses fasta_to_len converter code.
    4. 

  4. """
    5. 

    6. 

  6. import sys
    7. 

  7. from galaxy.datatypes.converters.fasta_to_len import compute_fasta_length
    8. 

  8. 

  9. compute_fasta_length( sys.argv[1], sys.argv[2], sys.argv[3], False )
    10.