/tools/validation/fix_errors.xml

https://bitbucket.org/cistrome/cistrome-harvard/ · XML · 23 lines · 17 code · 6 blank · 0 comment · 0 complexity · f2a830ccc3b6ab2377f53d07a3b0f78c MD5 · raw file

  1. <?xml version="1.0"?>
  2. <tool name="Fix errors" id="fix_errors" hidden="true">
  3. <description>in data validation</description>
  4. <command interpreter="python">
  5. fix_errors.py $input $errorsfile $output -x $ext --methods=$methods
  6. </command>
  7. <inputs>
  8. <param name="errorsfile" type="text" />
  9. <param type="data" name="input" />
  10. <param name="ext" type="text" />
  11. <param name="methods" type="text" />
  12. </inputs>
  13. <code file="fix_errors_code.py"/>
  14. <outputs>
  15. <data name="output" format="input" metadata="input" />
  16. </outputs>
  17. </tool>