/test-data/emboss_compseq_out.compseq
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1#
2# Output from 'compseq'
3#
4# The Expected frequencies are calculated on the (false) assumption that every
5# word has equal frequency.
6#
7# The input sequences are:
8# Sequence
9
10
11Word size 2
12Total count 560
13
14#
15# Word Obs Count Obs Frequency Exp Frequency Obs/Exp Frequency
16#
17AA 40 0.0714286 0.0625000 1.1428571
18AC 27 0.0482143 0.0625000 0.7714286
19AG 26 0.0464286 0.0625000 0.7428571
20AT 41 0.0732143 0.0625000 1.1714286
21CA 26 0.0464286 0.0625000 0.7428571
22CC 24 0.0428571 0.0625000 0.6857143
23CG 15 0.0267857 0.0625000 0.4285714
24CT 41 0.0732143 0.0625000 1.1714286
25GA 19 0.0339286 0.0625000 0.5428571
26GC 17 0.0303571 0.0625000 0.4857143
27GG 19 0.0339286 0.0625000 0.5428571
28GT 43 0.0767857 0.0625000 1.2285714
29TA 50 0.0892857 0.0625000 1.4285714
30TC 38 0.0678571 0.0625000 1.0857143
31TG 37 0.0660714 0.0625000 1.0571429
32TT 97 0.1732143 0.0625000 2.7714286
33
34Other 0 0.0000000 0.0000000 10000000000.0000000