/test-data/chr22_5sp.maf
Unknown | 1814 lines | 1650 code | 164 blank | 0 comment | 0 complexity | 2fba0aa875846904534d084a55e23f2d MD5 | raw file
- ##maf version=1
- a score=72335.0
- s ponAbe2.chr14_random 4420348 101 + 7454900 ggTGAGatgctcactaccttagtgacggcttcaatcgtaccccaaaactcagtatcacacaat------------aaacctgcacatttttatttaatctaaaataaaagttg
- s hg18.chr22 14689667 101 + 49691432 ggTGAGatgctcattaccttagtgatggcttcaatcataccccaaaactcagtatcacacgat------------aaacctgcacatttttattcagtctaaaataaaagttg
- i hg18.chr22 C 0 C 0
- s panTro2.chr14 18511284 101 + 107349158 AGTGAGatgctcactaccttagtgatggcttcaatcataccccaaaactcagtatcacacaat------------aaacctgcacatttttattcaatctaaaataaaagttg
- i panTro2.chr14 C 0 C 0
- s rheMac2.chr13 136584868 100 + 138028943 -GTGAGatgctcactaacttagtgatggctttaatcataccccaaaactcagtatcacacaat------------aaacttgcacatttttgttcaatctaaaataaaagttg
- i rheMac2.chr13 C 0 C 0
- s calJac1.Contig8413 25710 112 + 95389 ggtactattcttgcta-cttggcgatggcttcaatcctatcccaaaattcagcatcacacaatataccctgtaacaaacctgcacatctaccccgaatctaaaataaaagttg
- i calJac1.Contig8413 N 0 I 1443
- a score=23402.0
- s ponAbe2.chr14_random 4421542 33 + 7454900 AACACTGACCTAAGTGGATAAACACATGGCAAC
- s hg18.chr22 14690862 33 + 49691432 AACGTTGACCTAAGTGGATAAACGCATGGCAAC
- i hg18.chr22 C 0 C 0
- s panTro2.chr14 18512475 33 + 107349158 AACGTTGACCTAAGTGGATAAACGCATGGCAAC
- i panTro2.chr14 C 0 C 0
- s rheMac2.chr13 136586050 33 + 138028943 AACATTGACCGAAGTGGATAAATGCATGGCAAT
- i rheMac2.chr13 C 0 C 0
- s calJac1.Contig8413 27265 33 + 95389 AGCATTGACCTAAGAGAGTAAATGGATGGCAAG
- i calJac1.Contig8413 I 1443 N 0
- a score=37887.0
- s ponAbe2.chr22 13585900 69 + 46535552 ggtcttccggatttctaaaccattttcAAAGAGTAAGTGATTCACATTAAAAAGGCATATTTcagctgc
- s rheMac2.chr9 37387610 69 + 133323859 ggtctcctggatttctaaactattttcAAAGAGTAAGCGATTCACATTAAGAAGACATATTTcagttgc
- i rheMac2.chr9 C 0 C 0
- s panTro2.chr10 27717141 69 + 135001995 GGTCTTCTGGATTTCTAAACCATCTTCAAAGAGTAAGTGATTCACATTAAAAAGACATATTTcggctgc
- i panTro2.chr10 I 856 C 0
- s hg18.chr22 14865624 69 + 49691432 ggtcttctgggtttctaaaccattttcAAAGAGTAAGTGATTCACATTAAAAAGACATATTTcagctgc
- i hg18.chr22 C 0 C 0
- s calJac1.Contig7684 73267 52 - 101326 ----------------aaaccatcttcAAA-AGTAAGTAAGTAACATTAAAAAGACATATTTTAgctgc
- i calJac1.Contig7684 N 0 C 0
- a score=28433.0
- s ponAbe2.chr22 13585969 53 + 46535552 tctgcctatagagtagccattccattcttttattcctttaccttcttaataaa
- s rheMac2.chr9 37387679 48 + 133323859 tctgcctatggagtagcca-----ttcttttattcctttactttgttaataaa
- i rheMac2.chr9 C 0 C 0
- s panTro2.chr10 27717210 48 + 135001995 tctgcctatggagtagcca-----ttcttttattcctttactttcttaataaa
- i panTro2.chr10 C 0 I 218
- s hg18.chr22 14865693 53 + 49691432 tctgcctatggagtagccattccgttcttttattcctttaccttcttaataaa
- i hg18.chr22 C 0 C 0
- s calJac1.Contig7684 73319 42 - 101326 tctgcctatggagtagcca-----ttcttttattcctttactttctt------
- i calJac1.Contig7684 C 0 N 0
- a score=31907.0
- s ponAbe2.chr22 13601555 113 + 46535552 AAATGTCCTGTTTAGTTTCTGGATACAAGtttttgagttttagttttcctaatctttaaaaagagttaatattagttaggcaccctggctcatgcctgtaatcccagtacttt
- s hg18.chr22 14879601 113 + 49691432 AAATGTCCTGTTTAGTTTCTGGATACAAGTTTTTGAGCTTTAGTTTTCCTAATCTTTAAAAAGAGTTAATATTagtcggacagcgtggctcacaattgtaatcccagcacttt
- i hg18.chr22 C 0 C 0
- s panTro2.chr10 28793519 57 + 135001995 AAAGGTCCAGTTTCATTTCTGGATACAAGtttttgagctttaattttcttaatcttt--------------------------------------------------------
- i panTro2.chr10 C 0 C 0
- s rheMac2.chr9 37402661 113 + 133323859 AAATGTCCTGTTTAGTTTCTGGATACATGtttttgagctttagttttcctaatctttagaaagaattaatattagttgggcacggtggctcacacctgtaatcccagcacttt
- i rheMac2.chr9 C 0 C 0
- s calJac1.Contig31 207366 51 + 1545170 AGACGTACTAT--------------------------------------------------------------ggccgggagcggtggctcaagcctgtaatcccagcacttt
- i calJac1.Contig31 N 0 C 0
- a score=1818.0
- s ponAbe2.chr22 13762172 93 + 46535552 AGTTCCTtcctc---aaagtgtggtctgggtcaggccacctgcattagaatccacaggaagggggctgggagaggggt--gctagtta--tttttacagc
- s rheMac2.chr10 61844509 88 + 94855758 aatc-----ctc---aaagtgtggtctgggtcaggccaactgcattagaatccataggaagggggctgggagaggggt--gctagtta--tttttacagc
- i rheMac2.chr10 I 309 C 0
- s panTro2.chr22 16069569 79 + 50165558 aaTCACCTGCTCTGGGAAGTGCAGTTTCTTCCAGCCTACCT---------------------AGGCCAGGAGCAAAGTCAGCTCATCAATTTTTGCCAGC
- i panTro2.chr22 C 0 I 185
- s hg18.chr22 16061104 79 + 49691432 aaTCACCTGCTCTGGGAAGTGCAGTTTCTTCCAGCCTACCT---------------------AGGCCAGGAGCAAAGTCAGCTCATCAATTTTTGCCAGC
- i hg18.chr22 C 0 I 185
- s calJac1.Contig6986 119247 53 - 144597 -------tccta---accttgtgatct------gcctgcct----tggcctcccaaa-----gtgctgagattacagg----------------------
- i calJac1.Contig6986 N 0 C 0
- a score=24071.0
- s ponAbe2.chr22 13762515 81 + 46535552 TGCATTCAGGCTACTGAACAGAACTACATTACAGGGAACAAAGGAAGGAGTGAAGTGGAAAACCAT---GGTCCCAGAAAGGAT
- s hg18.chr22 16061368 70 + 49691432 TGCACTCAG----------AGAGTTAAA--ATAGAAAACAAGCAACAGATCCAAGTGGAGA--CATGCAGATCACACAAGAGAT
- i hg18.chr22 I 185 N 0
- s panTro2.chr22 16069833 70 + 50165558 TGCACTCAG----------AGAGTTAAA--ATAGAAAACAAGCAACAGATCCAAGTGGAGA--CATGCAGATCACACAAGAGAT
- i panTro2.chr22 I 185 N 0
- s rheMac2.chr10 61845162 79 + 94855758 TGCATTCAGGCTACCGAAAAGAAACATT--ATAGGGAACAAAGGAAGGAGGGAACTGGAAAGCCAT---GGTCCCAGAAAGCAC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 119509 79 - 144597 TGCATTTGGGCTACTGAAAAGAAACGTT--ACAGGGAACGAAGGAATGAGGGAAGTGGAAAGCCCT---GGTCCCAGACAGAAT
- i calJac1.Contig6986 C 0 C 0
- a score=273897.0
- s ponAbe2.chr22 13767485 392 + 46535552 agtaaCCTCAGGGGAGCACTCTGTAGACATTTCTGTG-ATCAAACTAATTGTCACTTAT--AATATTACTATACAAggccaggcacaatggctcggctcatgcccgtagttctagcactttgggaggccaaggcgagaggatggcttgagccccagagttcaagaccagcctgggcaacacggcaaaaccccatctc-acaaaaaaatacaaaaaattagctgggcatgatggtgcacacctctagggtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattttgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAG
- s panTro2.chr22 16075328 390 + 50165558 agtaacctcaggggagcactctgtagacatttctgtg-atcaaattaattgtcacttat--aatattactatacaatgccaggcacaATGGCTCggctcatgcctgtagtcctagcactttgggaggccaaggcgagaggacggcttgagccgcagagttcaagaccagcctgggcaacatggcaaaactccatctc-ac-aaaaaatac-aaaaattagctgggcatgatggtgcacacctctagtgtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattgtgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61852204 358 + 94855758 aataacctcaggggagcactctctagacatctgtgtg-accaaactaattgtcacttat--aATATTACTATACAAggccaggcacaa-----cggctcgtgcctgtagtcctagcactttgggaggccaaggcgacaggatggcttgagccccagagttcaagaccagcctgggcaacatggcaacaccccatctctac-aaaaaatac-aaaaattagctgggcgtgatggtgcgtacctctagcgtgctgac----------------------------------acacaggaggattgcttcagcctgggaggttgagtctgcagtgagccgagattgtgccactgcactccagcctagatggtagaatgagaccctgtcttaaatagtaataataa
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16066508 390 + 49691432 agtaacctcaggggggcactctgtagacatttctgtg-accaaattaattgtcacttat--aatattactatacaatgccaggcacaATGGCTCggctcatgcctgtagtcctagcactttgggaggccaaggtgagaggacggcttgagccgcagagttcaagaccagcctgggcaacacggcaaaaccccatctc-ac-aaaaaatac-aaaaattagctgggcatgatggtgcacacctctagtgtgctgacacaggaggattgcttcagctgacacaggaggctgacacaggaggattgcttcagcctgggaggttgagtctgaagtgagccgagattgtgccactgcactccagcctagatgatagaatgagaccctgtcttaaaTAG------TAA
- i hg18.chr22 C 0 C 0
- s calJac1.Contig6986 125582 350 - 144597 --------------aGCACTCTGTAGACATTTCTGTGAATCAAACTAATGGTCACTTATAAAATATTACTATACAAggccaggtacga-----tggctcatctttgtagtcctagcactttgggaggccaaggcgagaggacggcttgagcccaggagttcaggaccaggctgagcaacatggcaaaaccccatctctac-aaaaaatac-gaaaattagctgggcgtcatgctgcacacctctag----------------------tcccagttactctgagggctgacac--gaagattgcttcatcctgggaggttgaggctgcagtgagccgacattgtgccactgcgctccagcccagatgatagaattagaccctgtcttaaaTGG------TA-
- i calJac1.Contig6986 I 5892 I 1
- a score=44055.0
- s ponAbe2.chr22 13767877 56 + 46535552 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGGTTTTCAAG
- s panTro2.chr22 16075718 53 + 50165558 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGATTTTC---
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61852562 56 + 94855758 taataataataataCTATACAAGTCTGTTAGGAAGTTGCTCCAACAGGTTTTCAAG
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16066898 56 + 49691432 TAATAATAATGATACTATACAAGTCTGTTAGGAAGTTGCTGCATCAGATTTTCAAG
- i hg18.chr22 C 0 C 0
- s calJac1.Contig6986 125933 56 - 144597 TAATAGTAATGATACTATACAAGTCTGTTAGGAAATTGCTCCATCACGTTTTCAAG
- i calJac1.Contig6986 I 1 I 315
- a score=223423.0
- s ponAbe2.chr22 13767933 295 + 46535552 AAGATTTATCTTCCAGCTAGGTTGTCATCACTTCAGAGCTAGGAACTTGTATTCTCTCTGGTCTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTggctaggcacggtcactcatgcctgtaatcccagcact--------------------------------------------------------ttgggaggctgagatgggcagatcacctaaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtctctactaaaaatacaaaaattagccaggcgtggtggcacatgtctgtaatcccagctactcagaaagctga
- s panTro2.chr22 16075771 295 + 50165558 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTCTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTGACTAggcacggtcactcatgcctgtaatctcagcact--------------------------------------------------------ttgggaggccgagatgggcagatctcctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----acctgtctctactaaaaatacaaaaattagccaggcatggtggcacatgtctgtaatcccagctactcagaaagctga
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61852618 286 + 94855758 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTTTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAACAGTGTTGCTggcgaggcgcggtcactcacacctgtaatcccagcact--------------------------------------------------------ttcggaggccgagatgcacagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtttctactaaaaatacaa---------aggcgtggtggcacatgtctgtaaccccagctactcagaaggctga
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16066954 295 + 49691432 AAGATTTATCTTCCAGCTAGATTGTCATCACTTCAGAGCTAGGAACTTTTATTCTCTCTGGTTTTATTGAGCATCAGACAAATCTCATTTGCTACAGCAATAGTGTTGCTGACTAggcatggtcactcatgcctgtaatctcagcact--------------------------------------------------------ttgggaggccaagatgggcagatctcctgaggtcaggagttcaagaccagcctggccaacatggtgaaa----ccctgtctctactaaaaatacaaaaattagccaggcatggtggcacatgtctgtaatcccagctactcagaaagctga
- i hg18.chr22 C 0 C 0
- s calJac1.Contig6986 126304 352 - 144597 aagaTTCATCTTCCAGCAAGATCGTCACCACTTCAGATCTAGGAACTTTTATTCGCTCTGGTCTTACTGAGCATCAGACAAATCTCATTTGCT---GCCATAGAGTTGCTggccaggcgcagcgtctcacgcccgtaatcccagcactttgggaggccgaggtgggggccgggctcagcggctcacgcccgtaatcccagcacgttgggaggccgaggtgggtggattaactgaagtcaggagttcaggaccagcctgatcaagagactgaaaccctccctgtttctactgaaaatacaaagattagccatgcatggtggtacatgcctgtaatcccagctactcagatggctga
- i calJac1.Contig6986 I 315 I 1658
- a score=39158.0
- s ponAbe2.chr22 13770129 48 + 46535552 aaaaaaaCagccgggcacggtggctcactcctgtaaccccagcacttt
- s hg18.chr22 16069025 48 + 49691432 aaaaaaaCagctgggcacagtggctcactcctgtaaccccagcacttt
- i hg18.chr22 C 0 I 351
- s panTro2.chr22 16077844 48 + 50165558 aaaaaaaCagctgggcacagtggctcactcctgtaaccccagcacttt
- i panTro2.chr22 C 0 I 345
- s rheMac2.chr10 61854937 48 + 94855758 AAGAAAACagccaggcatggtggctcgctcctgtaaccccagcacttt
- i rheMac2.chr10 C 0 I 351
- s calJac1.Contig6986 128314 48 - 144597 TAAAAATCggctgggcacagtggctcacccctgtaatcccagcacttt
- i calJac1.Contig6986 I 1658 I 944
- a score=210038.0
- s ponAbe2.chr22 13770841 304 + 46535552 gctcacacctgtaatctcagcactttgcgaggccgaggagtgaagattacatgagctcaggagttggagatcagcctgccccacattgtgacaccccgtctataccaaacgtacaaaaa----------------ttatccacgcgtggtggtgcatgcctgtaatcccagctactcaggagcctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatagcaccagtgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaatttttttaat-aaaagaaaaaaaTTAAC
- s hg18.chr22 16069424 303 + 49691432 gctcacacctgtaatcccagcactttgggaggccgaggagtgtggattgcctgagctcaggtgttcgagatcagcctggccaacatggtgaaaccccgtctctactaaaagtacaaaaa----------------ttatccaggtgtggtggttcatgcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcacaccagtgcacttcagcctgggcaacagagtgagactctgtctcaaaaaaaattttttttaat--aaaaaaaaaaaTTAAC
- i hg18.chr22 I 351 C 0
- s panTro2.chr22 16078237 301 + 50165558 gctcacacctgtaatcccagcactttgagaggccgaggagtgtggattgcctgagctcaggtgttcgagatcagcctggccaacatggtgaaaccccgtctctactgaaagtacaaaaa----------------ttatccaggtgtggtggttcatgcacgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcacaccagtgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaatttttttaat----aaaaaaaaaTTAAC
- i panTro2.chr22 I 345 C 0
- s rheMac2.chr10 61855336 303 + 94855758 gctcacacctgtaatcccagcactttgggaggccgaggtgggtggattgcctgagctcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaa----------------tcacctaggtgtgatggtgcatgcctgtaatcccagctactcaggagactgaggcaggagaatcacttgaacccaagaggcagaggttgcagtgagccgagatagcaccagtgcactccagcctgggcgacagagtgagactctgtctcaaaaaaaattttttttaat--ttaaaaaaaaaaaaac
- i rheMac2.chr10 I 351 C 0
- s calJac1.Contig6986 129306 311 - 144597 gctcaagcctgtaatcccagcactttgggaggccgagatgggtggatcacacag--tcaagagatcaagaccatcctggccaacatggagaaaccccgtctttactaaaaatacaaaaaaaaaaaaaaaaaaaatttagccaggcatggtggcacgtgcctgtggtcccagctactcgggaggctgaggtggaagaatcacttgaacccaggaggtggacgttgcagtgagccgagactgtgccaccgcactccagcct-ggtgacagagcaagaatccatctcaaaaaaaaa-------aaccaaaaaacaaaaaTTAGC
- i calJac1.Contig6986 I 944 C 0
- a score=195144.0
- s ponAbe2.chr22 13771276 279 + 46535552 caggtacaccaccacccctggctaTTTATATGTGCAGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTATATCCTATGTGGTAGCTTAACCCCTG--------------------------GGAAAACTATAAAGGGAA-AGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTTTGGTTTCCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGGAGAACAGCTGAGGGAGG
- s calJac1.Contig6986 129617 291 - 144597 CAGGCAT-----------------------------GGATGCTAATTATTTCATCATTCATGGAGGTGTGTTTATACCA-TCCAGGATGCTATATCATATTAT---------GGTAGCTTAGCCCCTGGGAAAGGCGTAGAAGAAAGATTGTAAGGAAAGCTATGAAGGGAATAGCACAGTCTCAAGGCTGGATGCTTTTCCAACTTTTCCAGGGAAGACCAGGAATATTCAGGCCCATCCTGATTGTC-GCAAGTCCCCTA---------GGTCTTGGTTTCTGACACCCTTCTCCTAGTCTACCCGTAAGGACAGCGGAGCAGAGCGGCTGAGTGAGG
- i calJac1.Contig6986 C 0 C 0
- s rheMac2.chr10 61855767 314 + 94855758 caggtgcaccaccgctcctggctatttatatGTGCAGGATGCTGATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCGTATTGTATCCTATGCGGTAGCTTAGCCCCTG--------------------------GGAAAACTATGAAGGGAATAGCAAAGTCTCAGGGTTGGATGCTTTTCCAACTTTTCCAGGGAAGACCAGGAATATTCAGGCCAATCATGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTCTGGTTTCCAACACCCTTTACCTAGTCTACCTAAAAGGACAGAGGAGCAGAGCAGCCGAGTGAGG
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16078669 280 + 50165558 caggtgcaccaccacccctggctatttatatGTGCAGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTGTATCCTATGTGGTAGCTTAGCCCCTG--------------------------GGAAAACTAAAAAGGGAATAGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAAGAAGCAGGGGTTTTGGTTTTCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGCAGAACAGCTGAGTGAGG
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16069858 280 + 49691432 caggtgcaccaccacccctggctatttatatGTGCGGGATGCTAATTATTTCATGTTTCATGGAGGTGTGTTTATACTACTCCAGGATGCTATATCACATTGTATCCTATGTGGTAGCTTAGCCCCTG--------------------------GGAAAACTAAAAAGGGAATAGCAAAGTCTCAGGGCTGGATGCTTTT----------------------------------CCAATCCTGACTGTCTGCGAGTCCCCCAGGAAGCAGGGGTTTTGGTTTTCAACACCCTTTTCCTAGTCTACCCATAAGGACAGAGGAGCAGAACAGCTGAGTGAGG
- i hg18.chr22 C 0 C 0
- a score=43910.0
- s ponAbe2.chr22 13771555 56 + 46535552 CTTTCTCTGCTCCATCTAGAATAGCAACAGCCACAAGCACAGTAATAGCCCCAAGA
- s hg18.chr22 16070138 56 + 49691432 CTTTCTCTGCTCCATCTAGAATAGCAACAGCCACAAGCACAGTAATAGCCCCAAGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16078949 56 + 50165558 CTTTCTCTGCTCCACCTAGAATAGCAACAGCCGCAAGCACAGTAATAGCCCCAAGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61856081 56 + 94855758 CTTTCTCTGCTCCACCTAGAATAGCAACAGCCGCAAGCACAGTAGTAGCCCCAAGA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 129908 55 - 144597 -TCTCTGTGCTCTGTCTAAAATAGAAACAGCTACAAGCACGACAGCAGCTCCGAGA
- i calJac1.Contig6986 C 0 I 7490
- a score=1046331.0
- s ponAbe2.chr22 13794262 1386 + 46535552 aagaacttgaaaatcactgcctctaagaagCTAACAGTGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGTTTTTTGGCTGTTGAGATGCTGATAAGGTGACCTTGGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGCTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTGTAAGGGGCAAACTGAAAAGTAAGACTGAGGCCTGCAGCAACTCGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTAGATTGCAACACTCATTAAATATTTGCTAAAAAGTTgctcacagttagtgagcacttactatgtgctggacactggactagagtgcgtggtctacgccatctcatgcggtcctcaggacaactctgtgagggagatgatctgcccatt--------------ttatagatgcagaagtccaggACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCTCATGGCTCTGTTCCACTGTCTTCCTTGTTGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTT-TGGGAATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTTAGTT--TATCTCTGTCCTCATATTGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctattcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagaaaatgaggaggagttagcggatatcttccacatctcccaccccaaacctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccgcgattgcaacccaatgcaaggtcccatcatcccgcagctgctcacttcagcagcttctacttttgtcccctttccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccactacacagtgagtaaaatgcaagctcttttccttggcctgctgggccAGCCTCATCATGGGCCTGGGgaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtagcctctcaagtgaggaggcccttcacttccaaggcactgctgtgctatccgctttacaggcgagctccttccc----------------------------ctccttgacc--------------agtgcag
- s hg18.chr22 16089475 1362 + 49691432 aagaacttgaaaatcactgcctctaagaagCTAACAATGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGCTTTTTGGCTGATAA--------------------GGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGCTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGGCTTGCAGCAACTTGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTCGATTGCAACACTCGTTAAATATTTGCTCAAAAGTTgctcacagttagtgggcacttactatgtgctgggcactggactaaaggtcgtggtctacgccatctcatgcggtcctcaggacaattctgtgaggtaggtgatctgcccatt--------------ttacagatgcagaaGTCCAGGACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCCCATGGCTCTGTTCCA--GTCTTCCTTGTTGCTTCTCCCTGCTGAATTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTT-TGGGAATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTGAGTT--TGTCTCTGTCCTCATATTGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctgttcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagaaaatgaggaggagttagcggatatcttccacatctcccaccccaaatctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccacagttgcaacccaatgcaaggccccatcatccctcagctgctcacttcagcagcttctacttttgtcccctttccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccactacacagtgagcaaaatgcaagctctttttcttggcctgctgggccagccttatc--tggcctggagaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtggcctctcaagtgagggggcccttcacttccaaggcgctgctgtgcaatcccctttacgggggagctccttccc----------------------------ctccttgact--------------agtgcag
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16100440 1396 + 50165558 aagaacttgaaaatcactgcctctaagaagCTAACAATGTTTGGTATTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGTGCACAGCCCCAGTTAGGGGCCTTCTTCCTGCTTTTTGGCTGTTGAGATGCTGATAAGGTGACCTTGGAGCAGAATGGAGAAATGAACGGTGTTATACACAAACCACAGATGGTACACCCGAGCAGAACCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCATGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGGCCTGCAGCAACTCGTGACTCTTGAAGCTATTTGCTCCCTGTCCAGCTTCCCCATTCGATTGCAACACTCATTAAATATTTGCTCAAAAGTTgctcacagttagtgagcacttactatgtgctggacactggactaaaggtcgtggtctacgccatctcatgcggtcctcaggacaactctgtgaggtaggtgatctgcccattttatagatgcagaattatagatgcagaAGTCCAGGACCCACTAAGTAAAATATTGGAACTGGGGAGGCAGTCTTGGGGCCATGCTGCCCATGGTTCTGTTCCA--GTCTTCCTTGTGGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCGTTTTT-TGGGAATGCAAATGCTCAAACATACACTCAGTGAGAGAGGAGCTGGTGAGTT--TGTCTCTGTCCTCATATTGTGACAGGGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgacttttccattttccctccccacaaaagctgttcttcttccaactttccccttcccagtgagtggcacctccatccacccagttgtttctgccagaaacctgatttccactctagcaaatgaggaggagttagcgggtatcttccacatctcccaccccaaatctccaccagg-------------cccccatgtttacccttcaacctgcccactccttccatctccacagttgcaacccaatgcaaggccccattatccctcagctgctcacttcagcagcttctacttttgtcccgtctccattaattttccactctgcagatctaaaaacacaaatttcagcatgcccctcatgttccttcctgctgaaaacctttcaaagtctacccaccacacagtgagtaaaatgcaagctctttttcttggcctgctgggccagccttatc--tggcctggagaccatgtctccaccctctcccccagctcccgacctgctggccagccttcctgtggcctctcaagtgagggggcccttcacttccaaggcactgccgtgcaatcccctttacgggggagctccttccc----------------------------ctccttgacc--------------agtgcag
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61887207 1386 + 94855758 aaagaCTTGAAAATCACTGCCTCTAAAAGGCTAAGAATGTTTGGCGTTGGGGTCGACCCTTGGGAACCTGACTCTTTAAACCATGGACGTGAGGGCACAGCCTCAGTTACGGGCCTTCCTCCTGTGTTTTGGCTGTTGAGCTGCTGCTAAGGTGACGTTGGAGCAGAATGGAGAAATGAACGATGCCATACACAAACCACAGATGCTACACCGGAGCAGAGTCCAACAGACCATCACTAACCCAGGAGGGGAGAACTCCTGACTTCACGACTCTAAGGGGCAAACTGAAAAGTAAGACTGAGACCCGCAGCAACTCATAACCCTTGAAGCTATTTGCTCCCTGTCCGGCTT-CCCATTAGATTGCAGCGCTCATTAAATATTTGCTCAAAAGTTGCACAcagttagtgagcacttaccacgtgctggacactggactaaagtgcgtggtctacaccatctcatgcggtcctcaggacaactctgtgagggaggtgatctgcccatt--------------ttacagatgcggaaGTCCAGTACCCACTAAGTAAAATATTGGAAGCGGGGAGGCAGTCTTGGGGCCATGCTGTCCATGGCTCTGTTCCACTGTCTTCCTTGTTGCTTCTCCCTGCTGAACTCCCAGAAACTGCCCAATAAATATTTGTTTTGATTGTCCTTTTTA-TTTAGATGCAAATGCTCAAACATATACTCAGTGAGAGAGGAGCTGGTGAGTTTATGTCTCTCTCCTCATATGGTGACAGTGAATAGGCCAACACTGAGatctcaaactcaacttggcccatattgagttttccactttccctccccacaaaagctgttctgcttccaactttccccttcccagtgagtggcacctccatccacctagttgcttctgccagaaacctgatttccactctagaaaat---gaggagttagctgatatcttccacatctcccaccccaaacctccaccaggccctgcctgtcgtcccccatgtttacccttcaacctgcccactccttccatctccacaactg-aaaccaatgcaaggccccatcatccctcagctgcccatttcagcagcttctacttttgtcccctttccattaattttccactctgtagatctaaaaacacaaatttcagcatgcccttcatgttccttcctgctaaaaacctttcaaagtctacccactacacagtgagtaaaatgcaagttctttttcttggcctgctgggccagcctcatc--tggcctggggaccatgtctccaccctctccccca-ttcccgacccgctggccggccttcctgtgccctcaaaagtgagggggtccttcgcttccaaggcattgccatgcaatcccctttacggggcagctccttccc----------------------------cTCCTTGACC---------------------
- i rheMac2.chr10 I 30626 C 0
- s calJac1.Contig5889 56093 1410 + 156393 aagaaagagaaag---------CAAGCAAGCTAAGACTGGTTGGCATGGGGATCAACTCTTGGGAACCTGACTC--TAAACGATGAGTGTGAGTGCACAGCCCCAGCGAGGAGCCTTCTTTCTGTTTTTTGGCTGTTGAGCTGCTGATAAGGTAAACTTGGAGCAGAATAAAGAAATGAACACTGTCACACACAAACCACAGATGCTACACCTGAGCGGAGCCCAGCAGATCATCACTAACCCAGGAGGGGAGAACACTTGACTTCATGACTCTAAGGGGCAGACTGTAAAGTAAGATTGACTACTTCAGCAACTCGTGACTCTTGAAGCCATTTTCTCCCTGTCCATCTTCCCCATTAGAGTGCAACACTCATTAAACATTTGCTCACAAGTTgctttcaatgagtgagcacttactatgcact-gacactggactaaagtgcatggtccacaccgtctcatgtggtcctcaggacaaccctataagggaggtaatctgcccatt--------------ttacagatgtggaaGTCCATTCTCCACTAAG-----TATTGCAACCAGACAGGCAGTCTCAGGGCTGTGCTGCCCATG--TCTGTTTCACTGTCTTCCTTGTCTCTTCCCCCTGCTGAATTCCCAGAAGCTGCCAAAAAAATATTTTTTTTGATTGTCCTTTTTTGTCGGAATGCAAATGTTCAAACATACGTTGGGTGAGAGAGGAGCTGGTGAGTTTATGTCTCTCTCCTCATGTCATGACAGTGAACATGCAAACATTGAGATTTCAAACTCAACTTGG-CCACATTGACTTTTCTACCTTCCCTCCCCACAAAATCTGGTGTTATTCCAAC--TCCACTTCTCAGTGAGTGGCACCTCCATCCACCCAGTGGTTTCTGCCATAAACCTGATTTCCATTCTAGAAAATGAGGAGGAGTTAGCTGATACTTTCTGCATCTCCCACACAA------CAGCGGGCCCTGACTGTGGTGTCCCATGTTTACCCTTCAGCCTGCCCACTCCTTCCATCTCCACAATGGCAACCCAGCACAAGACTCCATCGTCCCCCAGCCACTCACTTCAGTAGTTTCTACTTTTGACCCCTTTTGATTAATCTTTTACTCTGCA-ATCTAAAAGCACAAATCTCAGCATGCCCCTCATGCTCCTTTCTGCTGAAAACCTTTCAAAGTCTACCCACAACACAGCAAGTAAAATGCAAGCTCTTTTTCTGGGCCTGCTAGGCCAGCCTTATC--TGGCCTGGGAACCATGTCTCCATCACCTCCTCCAGCTCCTGACCGGCTGGCCAGCCTTTCTGTGGCC-CTCAAGTGAGGGG--CCTTCActtccaaggctttgacatgcaatcccctttgccagaagcttctttcccctttccttttttttgagacagagtctcactccatcaccaggcaccagactggagtgcag
- i calJac1.Contig5889 C 0 I 198
- a score=81430.0
- s ponAbe2.chr22 13795648 146 + 46535552 ctcccacccatccttcagatcccaacggaaatg--tgtcttcctggggagggcttcagggaacacccctataggaagttagc------------cccagttccagtcttcacaatacccttttatcttcttcctcaacatgtatcacagcttgtgatttt
- s hg18.chr22 16090837 146 + 49691432 ctcccacccatccttgagatcccgatggaaatg--tgtcttcctggggagggcttcAGGGAACACCCCTATAGGAAGTTAGC------------CCCGGTTCCACTCTTCACAATACCCTTTTATCTTCTTCCACAACATGTATCACAGCTTGTGATTTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16101836 146 + 50165558 ctcccacccatccttcagatcccgatggaaatg--tgtcttcctggggagggcttcAGGGAACACCCCTATAGGAAGTTAGC------------CCTGCTTCCACTCTTCACAATACCCTTTTATCTTCTTCCACAACATGTATCACAGCTTGTGATTTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61888593 115 + 94855758 ------------------------------ATG--TGTCTTCCTGGGGAGGGCTTCAGGGAACACCCCTATAGGAAGTTAGC------------CCCGGTTCCACTCTTCACAATACCCTTTTATCTTCTCCCACCACATGTATC-CAGTTTGTGATTTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 57770 159 + 156393 ttcctgcccatccttgagatccagatgaaaagggtttttttctcagggaaggcttcAGGGAATGCCCCGTTTGAAAGGCAGCCCTGGCTGCACTCCCAGTTCCACTCCT-ATGATACCGTTTTCTCTTCTTCCACAACTTGCATCACAGTTTGTGATTTT
- i calJac1.Contig5889 I 198 I 689
- a score=389155.0
- s ponAbe2.chr22 13795794 506 + 46535552 gtattcatggatttctatgactgttcgtttcatatatatttgcatagtggatggaaagctgttgtttaccttggggtcttcatagtgccaggctcagaggaaggacccaaacgtctgctgTGGGAAGGCACACATGATTGAAAGTATGGAGGAAAAGAGTGGATGTCTGGGTGTATGAGCGTTTGTTAGACATTCAGGTCTCCTCAACCTGGTGTAACAGAGAAGAGGCAAATG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAGTCAGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccactggccaaaacttgtcataaatagatgagcctacaatgccaggagtgtacacagtgcctcctggaatcgggcagcactccacttgtgcaaTCACACCACAATCTTGGAGATCACGATAAATGCCAACAGCAAATGGATAAGCCTGGGCGAGGTCTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTCttttttttctttctt-------tt
- s hg18.chr22 16090983 510 + 49691432 GTATTCATAGATTTCTATGACTGTTCGTTTCATATATATTCGCATAGCAGATGGAAAGCTGTTGTTTACCTTGGGGTCTTCATAGTGCCAGGCTCAGAGGAAGGACCCAAACGTCTGCTGCGGGAAGGCACGCATGATTGAAAGTATGGAGGAAAAGAGCGGGTGTTTGGGTGTATGAGTGTTTGTTAGACATTTAGGTCTCCTCAACCTGGTGTAACACAGAAGAGGCAAATG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAATCAGCCCAGCCATTCGCTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacagtgcctcctggaatcgggcagcactctacttgtgcaatcatacCACAATCTTAGAGATCATGATAAATGCCAACAGCAAATGGATAAGCCTGGGCAAGTTCTTCTTGTTTGTTTGCATTTAGCTCTTCAttttcttttttttcttttcttttc---tt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16101982 513 + 50165558 GTATTCATAGATTTCTATGGCTGTTCGTTTCACATATATTCGCATAGCAGATGGAAAGCTGTTGTTTACCCTGGGGTCTTCATAATGCCAGGCTCAGAGGAAGGACCCAAACGTCTGCTGCGGGAAGGCACACATGATTGAAAGTATGGAGGAAAAGAGTGGGTGTTTGGGTGTATGAGTGTTTGTTAGACATTTAGTTCTCCTCAACCTGGTGTAACAGGGAAGAGGCAATTG-ACACCAGGGTGCCTTGCAAGGAGTGGCCAATCAGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacagtgcctcctggaatcgggcagcactctacttgtgcaatcatacCACAATCTTAGAGATCATGATAAATGCCAACAGCAAATGGATAAGCCTGGGCAAGGTCTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTCTTTTTTttcttttcttttcttttt
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61888708 511 + 94855758 GTATTCATAGATTTCTATGACTGTTCGTCTCATATCTATTCCCATAGCAGATGGAAAGCTGTTGTTTACCTTAGGGTCTTCATAGTGCCAGGTTCAGAGGAAGGACCCAAATGTCTGCTGTGGGAAGGCACGCATGATTGAAAGTATGGAGGAAAAGAGTGGGTGTTTGGGTGTGTGGGTGTTTGTTAGACATTTAGGTCTCCTCAACCTGGTATAAGAGAGAAGAGGCAAATATACAC---GGTGCCTTGCAAGGAGTGGCCAGTCGGCCCAGCCATTCACTGTGTGGCTTCTT-GTGtgccattggccaaaacttgtcataaatagatgagcctacaatgccagcagtgtacacggtgcctcctggaatcgggcagcattccacttgtgcaaTCACACCACAATCTTGGAGAGCATGATAAATGCCAACAGCACATGGATAAGCCTGGGCGAGGTTTTCTTGTTTGTTTGCATTCAACTCTTCACTTTCTTTTTTTTCCttttttctttcttt
- i rheMac2.chr10 C 0 I 300
- s calJac1.Contig6986 137453 503 - 144597 GTGTTCATAGATGTCTATGACCTTTCATTCCGTATACATTCCCATAGCAGATGGAGAGCTGCTGTTTACCGCGGGGTCTTCATAGTGCCAGACTCAGACCAAGGACCCAAACGTCTGCCGTGGGAAGGCGCGCCTGATTGAAAGTGTGGAGAAAAACAGTAGGTATTTGGGTGTGTGGG----TGTTGGACATTTGGGTCTCCTCAACCTGGTGTCACAAGGAAGAGGCAGATG-ACGCCA-GGTGTCTTGAAAGGAATGGCCAGTTAGCTCAGCCGTTCACTGTATGGCTTCTTCGTGtgccattggctgacaattgtcataaacagataagtctaaaatgctggcagtgtgcacagtgcctcccggacctgggcagccctccacctgtgcaatcacactgcggctctgGAGATCATGACAAATGCCAACAGCACATGGATGAGCCTGGGAGAGGCTTTCTTGTTTGTTTGCATTTAGCTCTTCATTTTAtttatttatttttaattt------
- i calJac1.Contig6986 I 7490 C 0
- a score=210330.0
- s ponAbe2.chr22 13796300 325 + 46535552 ttttttttttttgagacaaagtttcactcttgttgctcaggctggagtgtaatggcacgatctcagctcactgcaacctccgcctcctgggttcaaagtgattctcctgcctcagcctcccgcgtaggtgggattacaggcatgtgccaccacgcccggctaatt--ttgc-atttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattaca-ggcatgagccactgcacctggc----tTTTTAAAtttttttattttttatttttatt
- s hg18.chr22 16091493 325 + 49691432 ttttttttttttgagacaaagtttcactcttgttgcccaggctggagtgtaatggcacgatctcagctcactgcaacctccgtctcctgggttcaaagcaattctcctgcctcggcctcccgcgtagctggtattatagccatgcgccaccacgcctggctaatt--ttgc-attttcagtagagatggggtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattata-ggcatgagtcaccgcacccggc----tTTTTAAAtttttttattttttacttttatt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16102495 325 + 50165558 ttttttttttttgagacgaagtttcactcttgttgcccaggctggagtgtaatggcacgatctcagctcactgcaacctccgtctcctgggttcaaagcaattctcctgcctcggcctcccgcgtagctgggattacagccatgcgccaccacgcccggctaatt--ttgc-attttcagtagagatggggtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattata-ggcatgagtcaccgcaccgggc----tTTTTAAAtttttttattttttatttttatt
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61889519 304 + 94855758 tttttttttttttagatggagtcttgctc-cattgctcaggctggagtgcaatggcacaatctcgg--------------------ctgagtc--aagcaattct-ctgactcagcctcccaagtagctggaattacaggtgcctgccaccacatcgggctaatt--tttctatttttagtagagatggtgtttcaccatcttggccaggctggtcttgaactcctgacctt--gtgatccacccaccttgacctcccaaagtgctgggattaca-ggcatgagccaccgcgcccagccTAGCTCTTCAttttcttttttttttttttttttt
- i rheMac2.chr10 I 300 C 0
- s calJac1.Contig6986 137956 318 - 144597 ttttttttttttgagacagagtttcgtgcttgttacccaggctggagtgcaatggcgtgatctcggctcacggcaacctccgcctcctgggttc-aggcaattctcctgcctcagcctcccgagtagctgggactacaggcacgcgccaccgtgcccagctaatttattgt-atttttagtagagacggggtgtcaccatgttgaccaggacggtctcgatctcttgacctc--atgatccacccgcctcagcctcccaaagtgctgggattacagggcgtgagccactgcgcccggc--------cAATTTTCTTTATTCATTCCTATT---
- i calJac1.Contig6986 C 0 M 888
- a score=320686.0
- s ponAbe2.chr22 13796625 431 + 46535552 ttttagatggagtctcactctgtcacccaggctggagtgcaatggcgcaatctcggctcactgcaacctctgccttccaggttcaagcaattct-ctgactcagcctcccgagtagctgggattataggcacccaccaccacaccgggcgaatttttc-tattttttagtagagat-ggggtttcatcatcttggccaggctggtcttgaactcctgaccttgtgatccactcaccttggcctcccaaagtgctgggattacaggcattagccactgcgcccggccTAGCTCGTCATTTTCAGTGCAACACTGAAACACCCCTAGGGATCAAGCCCAAGCCACTTGCCT-CCATTTTTCTGTTTCTCGTCTCCCACACACtctttttttgttttttttgagacgggagtctcgctctgtcacccaggctggagtg
- s hg18.chr22 16091818 432 + 49691432 ttttagatggagtctcactctgtcgcccaggctggagtgcaatggcgcaatctcggctcactgcaacctctgccttccgggttcaagcaattct-ctgactcagcctcccaagtagctgggattataggcacccaccaccacaccgggctaatttttc-tattttttagtagagat-ggggtttcatcatcttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccTAGCTCCTCATTTTCAGTGCAACACTGAAACATCCCGAGGGATCAAGCCCAAGCCACTTGCCTCCCATCTTTCTGTTTCTCATCTCCCACACACTCtttttttgttttttttgagacgggaatctcgctctgtcacccaggctggagtg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16102820 433 + 50165558 ttttagatggagtctcgctctgtcacccaggctggagtgcaatggcgcaatctcggctcactgcaacctctgccttccgggttcaagcaattct-ctgactcagcctcccaagtagctgggattataggcacccaccaccacaccgggctaatttttc-tattttttagtagagatgggggtttcatcatcttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccTAGCTCCTCATTTTCAGTGCAACACTGAAACATCCCGAGGGATCAAGCCCAAGCCACTTGCCTCCCATCTTTCTGTTTCTCATCTCCCACACACTCttttttcgttttttttgagacgggaatctcactctgtcacccaggctggagtg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61889823 432 + 94855758 tttgagacggagtctcgctctg-cgcccaggctggagtgcagtggccggatctcagctcactgcaaactctgcctcccaggttcacgccattctcctgcctcagcctcccgagtagttgggactacaggcacccgccactgcgcccggctagttttttgtattttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccTAGCTCTTCATTTTCAGTGCAACACTGAAACATCCCTGGGGATCAAGCGTGAGCCACTTGCCTCCCATCTTTCTGTTTCTCATCTCCCACACACtctttttttg-gtttcgtgagacaggagtctcactctgtcacccaggctggagtg
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 58618 430 + 156393 ttttagatggaatcttgctctgtca-caaggctggagtgcagtggcacaagctcggctcagggcaacctccacctcctcggttcaagtgattcttctgcctcagcctccctactagctgggaccacaggcacacgccaccactcccggctaattttttgtatttttc-gtagagat-gaggtttcaccttgttggccaggatagtctcggtctcttgacttcgtgatccacctgccttgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccTAGCTCTTCATTTTCAGTGCATCACTGAAATATCCCTAGAGATCAAGACCAAACCACTTACCTCTTATCTTTCTGTGTCCCATCTCCCACACACTCTCCTTTCAGttttcttgagatgggagtcttg--ctgtcactcaagctgaagtg
- i calJac1.Contig5889 I 689 I 18
- a score=194462.0
- s ponAbe2.chr22 13797091 246 + 46535552 tcccgggctcaagtggttctcatgcctcagcctcctgagtagctgagattacaggcacccgccactaatttaaaaattaaatataaaaattagtctgctggctaatttttgtatttttagtagagaggagatttcaccatgttgaccaggctggtctcgaacgtctgatctcaacagatccacccgcctcggcctctgaaagtgctgggattacaggcgtgagccaccacgcccagACTCCCATAC
- s calJac1.Contig5889 59066 246 + 156393 tcccaggttcaggtgattctgatgcctcatccttctaagtacctgggaccacaggcaggcatcattaacttaaaaattaaatacaaaaattagcccgctggataatttttgtatttttagtagagacagtgtttcgtcatgttggccagtttggcctcgaactcttgatctcaactgatctgcccacctcagcctcccaaagtgctggaattacaggtgtgacccactgtgcccggcTGCCCCAAC
- i calJac1.Contig5889 I 18 C 0
- s rheMac2.chr10 61890290 246 + 94855758 tcccaggttcaagtgattctcatgcctcagcctcctgagtagctgagattacaggcacccgccactaatttaaaaattaaatataaaaattagcctgttggctaatttttgtatttttagtagagagaaggtttcaccatgttggccaggctggtctcaaacttctgatctcaactgatccgcccacctcggcctctaaaagtgctgggattacaggcgtgagccaccacacccagACTCCCATAC
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16103288 246 + 50165558 tcccaggttcaaatggttctcatgcctcagcctcctgagtagctgagattacaggcacccgccactaatttaaaaattaaatataaaaattaccctgctggctaatttttgtgtttttagtagagaggaggtttcaccatgttgaccaggctggtctcgaacgtctgatctcaactgatctgcccgcctcagcctctgaaagtgctgggattacaggcgtgagccaccacgcccagACTCCCATAC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16092285 246 + 49691432 tcccgggttcaagtggttctcatgcctcagcctcctgagtagctgagattacaggcacccgccactaatttaaaaattaaatataaaaattagcctgctggctaatttttgtatttttagtagagaggaggtttcaccatgttgaccaggctggtctcgaacgtctgatctcaactgatccgcccgcctcagcctctgaaagtgctgggattacaggcgtgagccaccacgcccagACTCCCATAC
- i hg18.chr22 C 0 C 0
- a score=32595.0
- s ponAbe2.chr22 13797337 40 + 46535552 TTTGCAAGCACCGACATTTATCTTTACAACTCTCCATAGT
- s hg18.chr22 16092531 37 + 49691432 TTTGTAAGCACCGACATTTATCTTTACAACTCTCC---GT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16103534 37 + 50165558 TTTGTAAGCACTGACATTTATCTTTACAACTCTCT---GT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61890536 37 + 94855758 TTTGCAAGCACTAACATTTATCTTTACAACTCTCT---GT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 59312 37 + 156393 CTTGCCAGCACCAACATTTATCTTTACAACTCTCT---AT
- i calJac1.Contig5889 C 0 I 1462
- a score=172185.0
- s ponAbe2.chr22 13797377 201 + 46535552 AGTTTTCTTTCTTCCATTCCTATTTTTCATTTTCTTTTTTGCGGGGAAAAGGGAGTGGCTTTTTCTTTATCACTGCTGTCATGCCTGGTGAGACTGTCTGTATTTTGGTCCTTTCCTTTGGCTGCCCCAGGAATCATCATCGATTATGCCAACATCTGTGACTTGCCACCTTCAAAGTGGGCTCTG--AATCCAAAGACAAAA
- s hg18.chr22 16092568 201 + 49691432 AGTTTTCTTTCTTCCATTCCTATTTTTCATTTTCTTTTCTGCGGGGAAAAGGGAGTGGCTTTTTCTTTATCACTGCTGTCATGCCTGGTGAGACTGTCTGTATTTTGGTCCTTTCCTTTGGCTGCCCCAGGAATCATCATCAATTATGCCAACATCTGTGACTTGCCACCTTCAAAGTGGGCTCTG--AATCCAAAGACAAAA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16103571 201 + 50165558 AGTTTTATTTCTTCCATTCCTATTTTTCATTTTCTTTTCTGCGGGGAAAAGGGAGTGGCTTTTTCTTTATCACTGCTGTCATGCCTGGTGAGACTGTCTGTATTTTGGTCCTTTCCTTTGGCTGCCCCAGGAATCATCATCAATTATGCCAACATCTGTGACTTGCCACCTTCAAAGTGGGCTCTG--AATCCAAAGACAAAA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61890573 201 + 94855758 AATTTTCTTTCTTCCATTCCTATTTTTTATTTTCTTTTTTGCGGTGAAAAGGGAGTGGCTTTTTCTTTATCACTGCTGTCATGCCTGGTGAGACTGTCTGTATTTTGGTCCTTCCTTCAGGCTGCCCCAGGAATCATCATCAATTATGCAAACATCTGTGACTTGCCACCTTCAAGGTGGGCTCTG--AATCCAAAGACAAAA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 139162 176 - 144597 AATTTTCTTTATTTCATTCCTATTTTTTGTTTTATTTTCTGGAGGGTAGGTGCAGTGGCTTTTCCTTTTTCACTGCTGTCATGCCTGGCGAGCCTGTCTGTAT----------------------CTCAGGAATCATCATCAATCGTGCCGACACCTGTGACTTGCCACCTTCAAAGTGGGTTCTGAAAATCCAAAGG-----
- i calJac1.Contig6986 M 888 C 0
- a score=143030.0
- s ponAbe2.chr22 13797578 172 + 46535552 GATGGCCCTCTGGgccagacgtggtggctcacacctgtaatcccagcactttgggaggctgaagcagaagaattgcttgagcccagaagtttgaggctgcagtgagccataatcacaccactgcattccagtccaggcgacagagcaagaccatatctctaaaaaataataa
- s hg18.chr22 16092769 172 + 49691432 GATGGCCCTCTGGgccagacgtggtggctcacacctgtaatcccagcactttgggaggctgaagcagaagaattgcttgagcgcagaagtttgaggctgcagtgagccataatcacaccactgcactccagtccaggcgacagagcaagaccatatctctaaaaaataataa
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16103772 172 + 50165558 GATGGCCCTCTGGgccagacgtggtggctcacacctgtaatcccagcactttgggaggctgaagcagaagaattgcttgagcccagaagtttgaggctgcagtgagccataatcacaccactgcactccagtccaggcgacagagcaagaccatatctctaaaaaataataa
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61890774 172 + 94855758 GATGGCCCTCTGGgccagacctggtggctcatacctgtaatcctagcactttgggaggctgaagtggaagaattgcttgagcccagaagtttgaggctgcagtgagccataatcacatcactgcactccagtccaggcaacagagcaagaccatatctctaaaaaataataa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 139338 161 - 144597 ---------CTGggccaggcgtggtggctcgggcctgtaatcccagcacttggagaagccgaagcagaagaactgcttgagcccagaagtttgagactgcagtgagccataatcacaccactgcactccaagccaggtgacagagcaaga--acatctctaaaaaatcataa
- i calJac1.Contig6986 C 0 I 755
- a score=339749.0
- s ponAbe2.chr22 13797750 465 + 46535552 taa--------taaaaaCTTTTTTAAAAAGTAGG-AAAAAAAAGGCCTCTCGTGCAATTGTGCATGTTTTGGCCAGCCTTTTCTATACATCAGATGTGGGGTCTGTGGCCTTGTTGGGGTGAAGGACTTTTATTTCCACCTGTTGAC-----------AGGACAGCAGGAGGACTGCCTGCCCTTCCTGGTCTTATGGTTGCTGTGTTGTTCTCAAGAGCCTTCCTCCAGCAGCAGGGAGGGGAGGACTGGCTGTCTCAGAATCTTTTAAAAGCCCTGCTGCCTGAGGACCTGCATCACCCAGGATTCCATTTCATTTCTCCAGCCACAATCCCTGCCAGTGTTTTCTGCACTCTGGATGAGAAACCTTAGGAAAGCAAATCAGATCATATCACTTCCCTTCTGAAAACT--CCAAAAGCTCCCC---CACCCGccgcactggc--ctctttattg----tccccctgcacagcctccagctcctcgtactgacct
- s hg18.chr22 16092941 472 + 49691432 taataaaaacttaaaaa------aaaAAAGTAGG-AAAAAAAAGGCCTCTCGTGTGATTGTGCATGTTTTGGCCAGCCTTTTCTATACGTCAGACGTGGGGTCCGTGGCCTTGTTGGGGTGAAGGACTTTTATTTCCACCTGTTGAC-----------AGGACAGCAGGAGGACTGCCTGCCCTTCCTGGTCTGACGGTTGCTGTGTTGTTCTCAAGAGCCTTCCTCCAGCAGCAGGGAGGGGAGGACTGGCTGTCTCAGAATCTTTTAAAAGCCCTGCTGTCTGAGGACCTGCATCACCCAGGATTCCGTTTCATTTCTCCAGCCACAATCCCTGCCAGTGTTCTCTGCACTCTGGATgagagaccttaggaaagcaaatcagatcgtatcacttcccttctgaaaatt--ccaaaagctccccccgcccccgccgcaccggcctctctttattg----gccccctgcacagcctccagctcctcgtactgacct
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16103944 477 + 50165558 taataataa--taaaaactttttaaaaaagtaggaaaaaaaaaGGCCTCTCGTGTGATTGTGCATGTTTTGGCCAGCCTTTTCTATACGTCAGAGGTGGGGTCCGTGGCCTTGTTGGGGTGAAGGACTTTTATTTCCACCTGTTGAC-----------AGGACAGCAGGAGGACTGCCTGCCCTTCCTGGTTTGACAGTTGCTGTGTTGTTCTCAAGAGCCTTCCTCCAGCAGCAGGGAGGGGAGGACTGGCTGTCTCAGAATCTTTTAAAAGCCCTGCTGTCTGAGGACCTGCATCACCCAGGATTCCGTTTCATTTCTCCAGCCACAATCCCTGCCAGTGTTTTCTGCACTCTGGATGAGAGACCTTAGGAAAGCAAATCAGATGGTATCACTTCCCTTCTGAAAATT--CCAAAAGCTCCCCCCGcccccgccgcactggcctctctttattg----cccccctgcacagcctccagctcctcgtactgacct
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61890946 463 + 94855758 taataaaaacttaaaaaaaa---AAAAAAGTAGG--AAAAAAATGCCTCTCACGTGATTGTGCATGTTTTGGCCAGCCTTTTCTACACGTCTGACATGGGGTCCGTGGCCTTGTTGGGGTGAAGGACTTTTATTTCTACCTGTTGAC-----------AGGACAGCAGGAGGACTGCCTGCCCTTCCTGGTCTGATGCTTGCTCTGTTGTTCTCAAGAGCCTTCCTCCAGCAGCAGGGAGCGGAGGGCTGGCTGTCTCGGAATCTTTTAAAAGCCCTGCTGCCTGAGGACCTGCATTACCCAGGATTCCATTTCATTTCTCCAGCCACAGTCCCTGCCAGTGTTTTCTGCGCTCTGGACGAG--ACTTTAGGAAAGCAAATCAGATCGTATCACTTCCCTTCTGAAAACA--CCAAAACATGCCCC--------CCGCACTGGCCTCGCTTTATTG-----ccccctgcacagcctccagctcctggtactgacct
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 140254 474 - 144597 TAATAACAAC-TAAGAA------AAAAACGTAGG-AAAAGAAAGGCCCCTCATGTGATTGGGCATGCTTTGGCCAGCCTTCTCTATAGGTCAGATGTGGGGTCCGTGGCTTTGTGGGGGTGAAGGA-TTTCCTTTCCACCTGCTGACaggacagcaggaggacagcaggaggacTGCCCGCACTTCCTGGTGTGATGGTTG---TGTTGTTCTCGAGAGCCTTCCTCCAGCAGCAGGGAGGGGATG-CTGGC-GGCTCAGCATCTCTTACAAGCCCAGCTGCCTGAGGACCTGCATCACCCAGGGTTCCGTTTCATTTCTCCGGCCACAATCCCTGCCCGTGTTTTCTGCCCTCTGGACGGGAGACCTTAGGAAAGCaaatcagatcgtgtcactt-ccttctgaaaacttcccaaaagtttccc-------aACGGCACTGGCCTCTCTATATCGCACCCCCTCCAACAAAATCTCCAGCTCCTCACACTGACCT
- i calJac1.Contig6986 I 755 C 0
- a score=17621.0
- s ponAbe2.chr22 13798215 39 + 46535552 ctttg--cagttctccaagccggccaggct-catgctttgca----
- s hg18.chr22 16093413 39 + 49691432 ctttg--cagttctccaaaccggccaggct-cgtgctttgca----
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16104421 39 + 50165558 ctttg--cagttctccaaaccggccaggct-cgtgctttgca----
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61891409 39 + 94855758 ctttg--cagttctccaaaccagccaggct-ggggctttgcg----
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 60811 45 + 156393 CTTTGGTCAGATGCACACACCC-CCAGGCTGTACACTTCCCTTCCC
- i calJac1.Contig5889 I 1462 I 88
- a score=43994.0
- s ponAbe2.chr22 13798254 68 + 46535552 caggcctttgcacaggtgcacacacccgctgggcctgggagagctttcccttcctgcttcAGGAAGGC
- s hg18.chr22 16093452 68 + 49691432 gaggcctttgcacaggtgcacacacccgctgggcctggaagacctttcccttcccgcttcacgaaggc
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16104460 68 + 50165558 gaggcctttgcacaggtgcacacatccgctgggcctggaagacctttcccttcccgcttcacgaaggc
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61891448 68 + 94855758 caggcctttgcacaggcgcacacacctgctgggcctggaagtgctttcccttcccgcttcaCGAAGGT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 140728 64 - 144597 CAGGCCTTTTGTCAGATGCACACACCC-CCGGGCCTGTA---GCTTGCCCCTCCCCCTTCCTGTGGGC
- i calJac1.Contig6986 C 0 I 1746
- a score=186748.0
- s ponAbe2.chr22 13798322 268 + 46535552 CAGGTGGCCTCCCTGGGCTGAGCCCCTGTCTCAGCATGTGGCGCACTGTGTTGAAATGCTCCAGGACCTGAGTGCCTCTATCACTGGGATACACCTCCCAATGGCAGAGGCGGTCTCGTCACCAAATGCTGTGGGTGCCGCTCTCTATGTAACTGCTGGGTCAAT-GTTTGCCCAGTGGTTGAATGAATGGATGCGAGAAGCTGCTTAGTTCCCGTCTCTCCCTGGGACTCCAGTCCTGCCACGGAG----GGAGCATTAGGAACAGGCACTC
- s hg18.chr22 16093520 268 + 49691432 caGGTGGCCTCCCTGGGCTGAGCCCCTGTCTCAGCATGTGGCGCACTGTGTTGAAATGCTCCAGGACTTGAGTGCGTCTATCACTGGGATACACCTCCCAATGGCAGAGGCAGTCTCGTCACCAAATACTGTGGGTGCCGCTCTCTATATAACTGCTCGGTCAAT-GTTTGCCCAGTGGTTGAATGAATGGATGCGAGAAGCTGCTTAGTTCCCTTCTCTCCCTGGGGCTCCAGTCCTGCCACGGAG----GGAGCATTAGGAACAAGCACTC
- i hg18.chr22 C 0 I 1160
- s panTro2.chr22 16104528 268 + 50165558 caGGTGGCCTCCCTGGGCTGAGCCCCTGTCTCAGCATGTGGCGCACTGTGTTGAAATGCTCCAGGACTTGAGTGCCTCTATCACTGGGATACACCTCCCAATGGCAGAGGCAGTCTCGTCACCAAATCCTGTGGGTGCCGCTCTCTATATAACTGCTCGGTCAAT-GTTTGCCCAGTGGTTGAATGAATGGATGCGAGAAGCTGCTTAGTTCCCTTCTCTCCCTGGGGCTCCAGTCCTGCCACGGAG----GGAGCATTAGGAACAAGCACTC
- i panTro2.chr22 C 0 I 1161
- s rheMac2.chr10 61891516 272 + 94855758 CACGTGGCCTCCCTGGGCTGAGCCCCTGTCTCAGCACGTGGCGCACTGTGTTGAAATGCTCCAGAACCCGAGTGCCTCTATCACTGGGATACACCTCCCAATGGCAGAGGCGGTCTCGCCACCAAACGCTGTGGGTGCCACTCTCTGTATAACTGCTCAGTCAAT-GTTTGCCCAGTGGTTGAATGAATGGATGGGAGAAGCTGCTTAGTTCCCTTCTCTCCCTGGGGCTCCAGTCCTGCCACTGAGCGAAGGAGCGTTAGGAACAGGCACTC
- i rheMac2.chr10 C 0 I 1718
- s calJac1.Contig5889 60944 228 + 156393 CAGGTGGCCTCCTTGGACAGAGCCCCCGTCTTGGCCTGCAGTACACTGTGTTGAAATGCTCCAGGCCTT-------------ACCAGG-----------AGTGGCAA---------------CAAATGCTGTAGTTGCCAATCTCTATGTAACTGTTATGTCACTGGTTTGCCCAGTGGTTGAATAAATGGATGTGAGACGTCACCTAGTTTTCTTCTCTCTCTAGGGCT-CAGCTTTGCCACCAAG----GGAGCATTAGGGACAGGTGCT-
- i calJac1.Contig5889 I 88 I 3530
- a score=113956.0
- s ponAbe2.chr22 13802034 147 + 46535552 AACCCAACTTCTCAGCTGCCTCTTTCGTGCTCTGTCCTTTCCCTTCTAACTCCCT-CCCACTCTGTGCACCACCTATTACTGTCCCTATTGTAAAAGATGTGGAAACGCGGGCTTCACAGGTT-------CAACAGACACTCAGTTCTGCAGCCA
- s hg18.chr22 16094013 155 + 49691432 AACCCAACTTCTCAGCTGCCTCTTTTGTGCTCTGTCCTTTCCCTTCTAACTCCCTCCCCACTCTGTGCACCACCTATTACTGTCCCTATTGTAGAAGATGTGGAAACGCGGGCCTCACGGGTTCAATAGCCAACAGACACTCAGTTCCGCAGCCA
- i hg18.chr22 N 0 C 0
- s panTro2.chr22 16105023 154 + 50165558 AACCCAACTTCTCAGCTGCCTCTTTAGTGCTCTGTCCTTTCCCTTCTAACTCCCT-CCCACTCTGTGCACCACCTATTACTGTCCCTATTGTAGAAGATGTGGAAACGCGGGCCTCACGGGTTCAATAGCCAACAGACACTCAGTTCCGCAGCCA
- i panTro2.chr22 N 0 C 0
- s rheMac2.chr10 61892010 154 + 94855758 AACCCAGCTTCTCAGCTGCCTCTTTGGGGCTCTGCCCTTTCCCTTCTAACTCCCT-CCCACGCTGTGCACCACCTGTTACTGTCCCTATTGTAGAAGATGTGGAAACGCGGGCCTCACGGGTTCAACAGCCAACAGACACTCATTTCCTCAGCCA
- i rheMac2.chr10 N 0 C 0
- s calJac1.Contig9263 16139 138 + 62211 AACCCAACTTCTTGGCTGCCTCTTTTGAGCTCTGCCCTTTTCCTGCTAACTCCTT-CCCATTCTGTCCATCACCTATGACTGTCCCTATTGTAGAAGATGTGGAAACACGGGCTTCATAGGTTCAATAGCCAGCAGACA----------------
- i calJac1.Contig9263 n 0 C 0
- a score=55069.0
- s ponAbe2.chr22 13802181 64 + 46535552 TCAAGAGGAAGACCAGGTAAAAACAACAGCCACAGCTGAGCTCcacagatgacctggtgtaagc
- s hg18.chr22 16094168 64 + 49691432 TCAAGAGGAAGACCAGGTAAAAACAACAGCCACAGCTGAGCTCCACAGatgacctggtgtaagc
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16105177 64 + 50165558 TCAAGAGGAAGACCAGGTGAAAACAACAGCCACAGCTGAGCTCCACAGatgacctggtgtaagc
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61892164 64 + 94855758 TCGAGAGGGAGACCAGGTAAAAACAACAGCCACAGCTGAGCTCCACAGACGACCTGGCGCAAGC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig6986 141463 64 - 144597 CCAAGACGGAGACCAGGTAAAAACAGCAGCCACGGCTGAGTTCcacagatgacctggtgtaagc
- i calJac1.Contig6986 n 0 I 789
- a score=404636.0
- s ponAbe2.chr22 13802245 535 + 46535552 ctcagtcgccttatgaggtgggcaagcactttccccccattcgacagatgaaaaacctgacttcagaggagctactaccctggatccaggttccagcaagtggctgagccaggCCCACTACACTAAATCTGTCCTTCGCTTACAGCCTCCTAGGGGAGGAGAGAGAAAACAGAAGCAGGAAAAGGCCAATTGAGAGGGAGAAGGTTCTGGAGCAGGACTGCAAGGCGACCTCGGCTTCCTGGCCCCTGGTGGCTGTATTTGCAGGTGCATCACACACCCTTCTCAG------CCTCTGCTCCCTGCACTGAACATGCTGGAACTCCAACCACACCTCACCTGCCACCTTCCTACC---TACTTCTATTTGCTCTTCTCCCACTTTTGCCCAGGGGCCAGTTTCAGCTGCTTACTTTCCAAAGGATCACTTGAGCAGCACCTCCATCTACACAGACTGCAGAAGGCCCAACTGAATGCAGGCTGGATGcagcctgggctgtgctttagaatcacctgggaaacttttacaagccacgggtgtcta
- s hg18.chr22 16094232 538 + 49691432 ctcagtcgccttatgaggtgggcaagcactttccccccattcaacagatgaaaaacctgacttcagagaagctaataccctggatccaggttccagcaagtggctgagccaggCCCATGACACTAAACCTGTCCTTCGCTTACAGCCTCCTAGGGGAGGAGAGAGAAAACAGAAGCGGGAAAAGGCCAATTGAGAGGGAGAAAGTTCTGGAGCAGGACTGCAAGGCGACCTTGGCTTCCTGGCCCCTGATGGCTGTATTTGCAGGTGCATCACACACCCTTCTCAG------CCTCTGCTCCCTGCACTGAACATGCTGGAACTCCAACCACACCTCACCTGCCACCTTCCTACCAGACACTTCTATTTGCCCTTCTCCCACTTTTGCCCAGGGGCCAGTTTCAGCTGCTCACTTTCCAAAGGATCACTTGAGCAGCACCTCCATCTACACAGACTGCAGAAGGCCCAACTGAATGCAGGCTGGATGcagcctgggctgcaccttagaatcacctgggaaacttttacaagccacaggtgtcta
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16105241 538 + 50165558 ctcagtcgccttatgaggtgggcaagcactttccccccattcaacagatgaaaagcctgacttcagagaagctaataccctggatccaggttccagcaagtggctgagccaggCCCACGACACTAAACCTGTCCTTCGCTTACAGCCTCCTAGGGGAGGAGAGAGAAAACAGAAGCGGGAAAAGGCCAATTGAGAGGGAGAAAGTTCTGGAGCAGGACTGCAAGGCGACCTTGGCTTCCTGGCCCCTGGTGGCTGTATTTGCAGGTGCATCACACACCCTTCTCAG------CCTCTGCTCCCTGCACTGAACATGCTGGAACTCCAACCACACCTCACCTGCCACCTTCCTACCAGACACTTCTATTTGCCCTTCTCCCACTTTTGCCCAGGGGCCAGTTTCAGCTGCTCACTTTCCAAAGGATCACTTGAGCAGCACTTCCATCTACACAGACTGCAGAAGGCCCAACTGAATGCAGGCTGGATGcagcctgggctgcaccttagaatcacccgggaaacttttacaagccacaggtgtcta
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61892228 499 + 94855758 CTCAGTCGccttatgaggtgggcaagcactttccccccattcgactgatgaaaagcctgacttcggagaagctaatacccaggatccaggttccagcaagtggctgagccaggCCCACTACACTAAACCTGTCCTTCGCTTGCAGCCTCCTAGGGGAGGGGAGAGAAAACAGAAGCGGAATAAGGCCAACTGAGAGGGCAAAGGTTCTGGAGCAGGACCACAAGGCGACCTCGGCTTCCTGGCCCCCGGTGCCTGTACTTGCAGGTGCATCACACACCCTTCTCAG------CCTCTGCTCCCTGCACTGAATATGCTGGAACTCCAACCACACCTCACCTGCCACCTTCCTACCGGACACTTCTATTTGCCCTTCTCCCACTACTGCCCAGGGGCCAGTTTCAGCTGCTCACTTTCCAAGGGATCACTTGAGCAGCACCTCCATCTACACAGACTTCAGAAGGCTCAACTGAACGCAGGCTGGATGCAGCCTGGGCTGTGCCtt---------------------------------------
- i rheMac2.chr10 C 0 I 769
- s calJac1.Contig9263 16277 518 + 62211 CTCA---GCGTTAGGAGGTgggcaagcacttttcccccattcgacagatggagagcctgacttcagagaagctaagaccctggatccagcttccagcaagtggcagagccaggCCCACTGC-CTATACCTGTCCTTCGTCCACAGCCTCCTAGGGGAGGGGAGAGAAAACAGAAGCAGGGAAAGGCCAGTTACAAGGGAGG----TTTGTAGCAGGACTGCAAGGTGGCCTCAGCCTCCTGGCCCCTGGTGGCTGTATTTGCACATGCATACCACACCCTTTTCAGCTCTGCCCACTGCTCTCTGCACTGAACATTCTGGAACCCCAGCCACACCTCACCCATCCCCTTCCCACCAGACACTTCTATTTGCCCTTCCACCACTATTGCCCAGGCGCTACTGTCAGCTGCTCCCTTCCTGAAGGATTGTTGGAGTGGTACCTCCATTTACACAAACTTCAGAAGGCCCAACTGAGTGCAGGTTGGATGTAGCTGGGGCTGAGCCTTAGAATCACCTGGAAAACttct------------------
- i calJac1.Contig9263 C 0 n 789
- a score=420145.0
- s ponAbe2.chr22 13799565 564 + 46535552 TTCTCGAGAGTCAC-CCTGGGCG-TGGCG--CTCCTTCTGAAGA-CACCCCGA-GGAGTCCAGG--AG-AAGAGGAAGG-GGCTCCGGAGGA-GAGAGGATGGGAA-GATGGAGAGCAGCCCCTCCCA-CTTTTGCCAGTGGTTCCACCCCTCTTCCTCAAACAG-GGGGGTGCTCCCTGCCCGCCTCCAAGAAGCTCCTGCTTTCACCACCACG-----AAGAAA----TACCTCCGTCTAGCGCATCCAACTGGGAACCGCACTCCGGAGGACGATGCTTGGCTCCCCTTGGCACGGGTATTGTGCCTGTGCCCCT-GGGCCAGCCTTGATGCACAGTGAACCTCTGTCTTGGGAGACCTATGCCCTCTTTCCTCCCCTCTCCTTGTGATGATGAAAGTGTGCCTTCAGGCCAATggtggctcaagcctgtaatcccagcactttgagaggtagaggcaagaggatcgcttgagccccggagtccaagaccagcgtggccaacatagcgagaccccatctccacaaaaaaattaaaagtGTGCCTTTACCTCCTCCCGTGTGAAGAGCaggtaaggggtagacttt
- s hg18.chr22 16094980 575 + 49691432 TCCTCGAGAGTCACACCTGGGCGCTGGCGACTCCCTCCTGAAGGCCACCCCGAGGGAGTCCAGG--AGAAAGAGGAAGGAGACTCCAGAGGAGGAGAGGATGGGAAGGATGGAGAGCAGCCCCTCCCACCTCTTCCCAGTGGCTCCACCCCTCTTCCTCAAAGAGCATGGGTGTTCCCTGCCCGCCTCCAAGAAGCTCCTGCTTTCACCACCGCG------AGAAA----TCCCTCCGTCTAGCGCATCCAACTGGGAACTGCACTCCGGAGGACAATGCTTGGCTCCCCTTGGCACGGGTATTGTGCCTGTACCCCT-GGGCCGGCCTTGATGCACAGTGAACCTCTGTCTTGGGAGACCCACGCTCTCTTTCCTCCCCTCTCCTTGTGATGATGAAAGTGTGCCTTCAGGCCAATggtggctcgagcctgtaatcccagcactttgagaggtagaggcaagaggatcgcttgagccccggagtccaagaccagcgcggccaacatagcgagaccccatctctacaaaaaaATTAAAAGTGTGCCTTTACCTCCTCCCATGTGAAGAGCAGGTAAggggtagacttt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16105989 575 + 50165558 TCCTCGAGAGTCACACCTGGGCGCTGGCGACTCCCTCCTGAAGGCCACCCCGAGGGAGTCCAGG--AGAAAGAGGAAGGAGACTCCAGAGGAGGAGAGGATGGGAAGGATGGAGAGCAGCCCCTCCCACCTCTTCCCAGTGGCTCCACCCCTCTTCCTCAAAGAGCGTGGGTGTTCCCTGCCCGCCTCCAAGAAGCTCCTGCTTTCACCACCACA------AGAAA----TCCCTCCGTCTAGCGCATCCAACTGGGAACTGCACTCCGGAGGACAATGCTTGGCTCCCCTTGGCACGGGTATTGTGCCTGTGCCCCT-GGGCCAGCCTTGATGCACAGTGAACCTCTGTCTTGGGAGACCCACGCCCTCTTTCCTCCCCTCTCCTTGTGATGATGAAAGTGTGCCTTCAGGCCAATggtggctcaggcctgtaatcccagcactttgagaggtagaggcaagaggatcgcttgagccccggagtccaagaccagcgcggccaacatagcgagaccccatctctacaaaaaaATTAAAAGTGTGCCTTTACCTCCTCGCATGTGAAGAGCAGGTAAGGGGTAGACTTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61893506 580 + 94855758 TTCCTGTGAGTCACACATGGGCGCTGGCAACTTCCTCCTGAAGGCCACCCCAAGGGAGTCGAGG--AGAAAGAGGAAGGAGACTCAGGAGGAGGAGAGGATGGGAAGGATGGAGAGCAGCCCCTCCCACCTCTTCCCGGTGGCTCCACCCCTCCTCCTCAAACAGCA----TGTTCCCTGCCCACCTCCAAGAAGCCCCTGCTTTCACCACCACCACCACAAGAAATCCCTCCCTCCGTCTAGCGCATCCAACTGGGAACCGCACTGCGGAGGACAGTGCTTGGCTCCCCTTGGCATGGGTATTGTGCCTGTGCCCCT-GGGCCAGCCTTGATGCACAGTGAACCTCTGTCCTGGGAGACCCACACCCTCTTTCCTCCCCTCTCCTTGTGATGATGAAAGCGTGCCTTCAGGACAAcggtggctcaagcctgtaatcccagcactttgagaggtagaggcaagaagatcctttgagccccggagtccaagaccagcgtggccaacatagcgagaccccacctctacaaaaaaattaaaagtGTGCCTTCACCTCCTCCCGTGTGAAGAGCAGGTAA-aggtagacttt
- i rheMac2.chr10 I 1718 I 1
- s calJac1.Contig6986 142576 549 - 144597 TCCCTGAGAGTCACACAGGGGCACTGGTGTCTCCCTCCTCAAGGCCACCCCCGGGGAGACCAGACCAGGAGAAAGAAGGTGACTCCTGAGGAGGAGAGGATGGGAAGGATGGAGAGCAGCCTCTCCTGCCTCTTCCCGGTGCCTCCACCCCTCTTCCTCAAACAGCATGGATGTTTCCTGCCCACCTCCAAGAAGCCCCAGCTTTCACCACCACA------GGAAA----CCCCTCCATCTTGCACATCCAGCCGGGAACCGCACTCCAGA--------------------------GTGCATTATGCCTGTGCCCCCGGGGTCAGCCTTGATGCACAGCGAGCCTCTGTCCTGGGAGGCCCACGCCCTCTTTCCTCCCCATCC---ATGATGATGAAAGTGTGCCTTCAGGCTAgcggtggctcacgcctgtaatcccagcagtttgggaggcagagccaagaggatcttttgagcccaggagtccaagaccagcctggccaacacagcaagaccccatgtctacaaaaaaaattaaagtGTGCCTCCACATCCTCCGGCATGAAGAGCAGGTAAGGGGTGGACTTT
- i calJac1.Contig6986 C 0 I 104
- a score=219371.0
- s ponAbe2.chr22 13800129 280 + 46535552 tggccccgttttatagagagaaactgaggctcacaaggaaaaa-taatctgtggacagggatac--------------accaggaagtTCCAA------GCTGAGGGTAAATTACCCTAGAGATCTGCAAAAGTTCAAGTGACGGCTGCCATAGAGGAAGTGGGTCCAGATGGGGAACAGGGCCATCTCCGCCTTCAAAACAA-CCCCAAACAGGGCTTGGAATAAGATCGACCATAggccaggcacggtggctcacgcctgtaatcctagcactttggaagtccgaggcaggcagatcaca
- s hg18.chr22 16095555 280 + 49691432 tggccccgttttatagagagaaactgaggctcaCAAGGAAAAA-CAATCTGTGGACAGGGATAC--------------ACCAGGAAGTTCCAA------GCTGAGGGTAAATTACCCTAGAGATCTGCAAAAGTTCAACTGATGGCTGCCATGGAGGAAGTGGGTCCAGATGGGGAACAGGGCCATCTCCGCCTTCAAAACAA-CCCCAAACAGGGCTTGGAATAAGATCGACCATAggccaggctcggtggctcacacctgtaatcctagcactttggaagtccgaggcaggcaaatcaca
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16106564 281 + 50165558 TGGCCCCGTTTTATAGAGAAAAACTGAGGTTCACAAGGAAAAACCAATCTGTGGACAGGGATAC--------------ACCAGGAAGTTCCAA------GCTGAGGGTAAATTACCCTAGAGATCTGCAAAAGTTCAACTGATGGCTGCCATGGAGGAAGTGGGTCCAGATGGGGAACAGGGCCATCTCCGCCTTCAAAACAA-CCCCAAACAGGGCTTGGAATAAGATCGACCATAggccaggcgcggtggctcacacctgtaatcctagcactttggaagtccgaggcaggcaaatcaca
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61894087 270 + 94855758 tggccccattttatagagagaaactgaggctcaCAAGGAAAAA-CAATCTGTGGACAGGGATAC--------------ACCGGGAAGTTCCAA------GCTGAGGG----------TAGAGATCTGCAAAAGTTCAAGTGATGGCTGCCATAGAGGAAGTGGGTCTAAATGGGGAACAGGGCCATCTCTGCCTTCAAAACAG-CCCCAAAGAGGGCTTGGAATAAGATCGACCATAggccaggcgcggtggctcacgcctgtaatcttagcactttggaaggccgaggcaggtggatcaca
- i rheMac2.chr10 I 1 I 154
- s calJac1.Contig6986 143229 300 - 144597 TGGCCCCATTTTGTAGAGAGAACCTGAGGCTCACAAGGAAAAA-CAATCCGTGGACAGGAACACACCAGGAGGAGTATACCAGGAAGTTCTCATCTTGGGCTGAGGCTAAATTACCCTAGAAATCTGGGAAAGTTCACGTGACGGCCACCATAGGGGAAGTGGGTCCAGATTGGGAACGGGGCCATCTTTGCCTTCAAAACAACCCCCAAACAGGGCTT-GAATAAGATCAACCATAggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcatg
- i calJac1.Contig6986 I 104 C 0
- a score=39288.0
- s ponAbe2.chr22 13800409 49 + 46535552 aggtcaggagttcgagaccagcttggccaacatggtaaaaacctgtctc
- s hg18.chr22 16095835 49 + 49691432 aggtcaggagttcgagaccagcttggccaacatggtgaaaccctgtctc
- i hg18.chr22 C 0 I 8
- s panTro2.chr22 16106845 49 + 50165558 aggtcaggagttcgagaccagcttggccaacatggtgaaaccctgtctc
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61894511 49 + 94855758 aggtcaggagttcaagaccaacttggccaacatggtgaaaccccttccc
- i rheMac2.chr10 I 154 I 1
- s calJac1.Contig6986 143529 49 - 144597 aggtcaggagttgcagaccagcctggcctacatggtgaaaccccgtccc
- i calJac1.Contig6986 C 0 I 101
- a score=44488.0
- s ponAbe2.chr22 13800458 60 + 46535552 taaaa---------aaaaaaaaaaaatcacccAAAGA--CCCCCTGATATTTCCCCAGCTTCTTGGCCAAG
- s hg18.chr22 16095892 62 + 49691432 aaaaa---------aaaaAAAAAAAATCGACCAAAGACCCCCCCTGATATTTCCCCAGCTTCTTGGCCAAG
- i hg18.chr22 I 8 C 0
- s panTro2.chr22 16106894 61 + 50165558 aaaaa---------aaaaaaaaaaaatCGACCAAAGA-CCCCCCTGATATTTCCCCAGCTTCTTGGCCAAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61894561 60 + 94855758 aaaaa---------aaaaaaaaaaaATTGACCAAAGA--CCCCCTGATATTTCCCCAGCTTCTTGGCCAGG
- i rheMac2.chr10 I 1 C 0
- s calJac1.Contig6986 143679 69 - 144597 tgagactctatctcaaaaaaaaaaaTTTGACTAAAGA--CCCCCTGATATTTCCCCAGCTTCTTGGCCAGG
- i calJac1.Contig6986 I 101 n 101
- a score=560810.0
- s ponAbe2.chr22 13800518 716 + 46535552 CAGGGGACGAGGTCAGGGTCTGTCTCTGTAGGATGAAGATTA-AGGACTGGGGTCTGTGCATGCCTGTGTGTATGGCCCTCGCCACCCCCATTCAACCAAGAACATCAATTTGCATCTGAAACTGTTCTATAGGTATGCCACAGCAGCCTCCTAGGCGGCATCTCTTCACCCCCAGCGCAAATGGTGAGATTT-GGGTGACTCCATCCCCCAAACGCGGAACCTGGCGAGGTCTGTGTTAAAATGTAAATTCAGGAGTCATAAATATTTTTAAAGTTGTAATACAAGCAACAGATTGTCTGGGGGCCAAAAGGATGACCTTTTACATGCAAATGAAAATAATGGATCTTTAAACGCAGTTATTGTCAGGATGATGAGCTGACTAAGACTGGAGGAAAGGAGGCCTCCTGGGTGGGCGCCAGCATGGGATAAAGAAAAGACAACCAGAGCAGAGATGAAAAAGACCGAAAGGGGATGCAAGCACCCAGGAGAGTGGACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTCAAGGAAAACACCTTAGCACCGGGGCTTCCGCGTCCCCAGCACTTCTCATGCTCGGTGTTTTAACTCTCATTT
- s hg18.chr22 16095954 716 + 49691432 CAGGGGATGAGGTCAGGGTCTGTCTCTGTGGGACGAAGATTA-AGGACTGGGGTCTGTGCATGCCTGTGCGTATGGCCCTTGCCACCCCCATTCAACCAAGAACATCAATTTGCATCTGAAACTGTTCTATAGGTATGCCAGAGCAGCCTCCTAGGCGGCATCTCTTCACCCCCAGCGCAAATGGTGAGATTT-GGGTGACTCCATCCCCCAAACACAGAACCTGGCGAGGTCTGTGTTAAAATGTAAATTCAGGAGTCATAAATATTTTTAAAGTTGTAATACAAGAAACAGATTGTCCGGGGGCCAAAAGGATGACCTTTTACATGCAAATGAAAATAATGGATCTTTAAACGCAGTTATTGTCAGGATGATGAGCTGACTAAGACTGGAGGAAAAGAGGCCTCCTGGGTGGGCGCCAGCGTGGGATAAAGAAAAGACAACCAGAGCAGAGATGAAAAAGACCGAAAGGGGATGCAAGCACCCAGGAGAGTGGACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTCAAGGAAAACACCTTAGCACCGGGGTTTCCATGTCCCCAGCACTTCTCACGCTCAGTGTTTTAACTCTCATTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16106955 716 + 50165558 CAGGGGATGAGGTCAGGGTCTGTCTCTGTGGGACGAAGATTA-AGGACTGGGGTCTGTGCATGCCTGTGTGTATGGCCCTTGCCACCCCCATTCAACCAAGAACATCAATTTGCATCTGAAACTGTTCTATAGGTATGCCAGAGCAGCCTCCTAGGCGGCATCTCTTCACCCCCAGCGCAAATGGTGAGATTT-GGGTGACTCCATCCCCCAAACACGGAACCTGGCGAGGTCTGTGTTAAAATGTAAATTCAGGAGTCATAAATATTTTTAAAGTTGTAATACAAGAAACAGATTGTCCGGGGGCCAAAAGGATGACCTTTTACATGCAAATGAAAATAATGGATCTTTAAACGCAGTTATTGTCAGGATGATGAGCTGACTAAGACTGGAGGAAAGGAGGCCTCCTGGGTGGGCGCCAGCATGGGATAAAGAAAAGACAACCAGTGCAGAGATGAAAAAGACCAAAAGGGGATGCAAGCACCCAGGAGAGTGGACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTCAAGGAAAACACCTTAGCACCGGGGCTTCCGTGTCCCCAGCACTTCTCACGCTCAGTGTTTTAACTCTCATTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61894621 672 + 94855758 CAGGGGACAAGGTCAGGGTCTGTCTCTGTG----------------------------------------GTATGGCCCTTGCCACCCCCATTCAACCAAGAACATCAATTTGCATCTGAAACTGTTCTATAGGTATGCCAGAGCAACCTCCTAGGCAGCATCTCTTCACCCCCAGCGCAAATGGTGAGATTTGGGGTGACTCCATCCCCCAGACGCGGAACCTGGCGAGGTCTGTGTTAAAATGTAAATTTAGGAGTCATAAATATTTTTAAAGTTGTAACACAAGCAACAGATTGTCCGCGGGCCAAAAGGATGACCTTTTACATGCAAATGAAAATAATGGATCTTTAAATGCAGTTATTGTCAGGATGATGAGCTGACTAAGACTGGAGGAAAGGAGGCCTCCTGGGTGGGCTCCAGCA----GTAAAGGAAAGACAACCAGAGCAGAGATGAAAAAGACCGAAAGGGGATGCAAGAACCCA-GAGAGTAGACTGAGAAGTTCTAGGGGCAGGCCGGCGTGCAGAAAGAGGACCAGATTCCTGAGGTCATTAACTAAGGATGACAATGGAGGACCCCAAGGGTCCCTCTGGGACAAAAATAGGACCGGCACGCACTGTCTCAGAAACTGGATGCAGGAGCTCAAGGAAAACACCTTAGCACC-AGGCTTCCGTGTCCCCAGCACTTCTCACGCTCAGTGTTTTAACTCTCATTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 2 679 + 38599 CAGGGGACAAGGTCAGGGTCTGCCCCTGCGGGCTGAAGATCAGGGGACTGGGATCTGTGCATGCCTATGTGTACGGCCCTTGCCACCCCCATTCAACCAAGAACATCAATTTGCATCTGAAACTGTTCTATAGGTATGCCAGGGCAAGCTCCT-GGCGGCAGCTCTTCATCCCCAGCGCAAAAGGTGAGATTTGCGGGGACTCCATCCCCCAAACGTGGAACCTGGCGAGATCTGTGTTAAAATGTTAATTCAGGGGTCATAAATATTTTTCAAGTTGTAATACAAGCAACAGATTGTCAGGGAGCCAAAAGGATGACCTTTTACATGCAAATGAAAATAATGGATCTTTAAACGCAGTTATTGTCAGGATGATGAGCTG----AGACTGGAGGAAAGGAGGCCTCCTGGGTGGGCTCCGGCATAGGATTAAAAA---------------------AAAAAGACCAAAAGGGGATGCAATTACCCAGGAGAGTGGACTGAAAAATTCCAGGGGCAAGCCAGGGGGCAGAAAGGGGACCAGATTCCTGGGGGCAGTAACTAAGGATGACAAAGGAGGA-CCCAAGGGGCCCTCTGGGACAAAAGTAT--CTGGGATGCACTATCTCGGAAACTGGATA---------AAGAAAAACACCTTAGCCCC-AGGCCTTCCCCTTCCCAGCACGTCTCACACTCAGTGTTGTAACTCTCATTT
- i calJac1.Contig13114 n 101 C 0
- a score=124476.0
- s ponAbe2.chr22 13804325 151 + 46535552 ACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTC
- s rheMac2.chr10 61895071 151 + 94855758 ACTGAGAAGTTCTAGGGGCAGGCCGGCGTGCAGAAAGAGGACCAGATTCCTGAGGTCATTAACTAAGGATGACAATGGAGGACCCCAAGGGTCCCTCTGGGACAAAAATAGGACCGGCACGCACTGTCTCAGAAACTGGATGCAGGAGCTC
- i rheMac2.chr10 I 1204 C 0
- s calJac1.Contig5889 64703 148 + 156393 ACTGAAAATTTCTAGGGGCAAGCCAGGGGGCAGAAAGGGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAAAGTAGGA-CCCAAGGGGCCCTCTGGGACAAAAGTAT--CTGGGATGCACTATCCCAGAAACTGGATGCAGGAGCTC
- i calJac1.Contig5889 I 3530 I 317
- s hg18.chr22 16096447 151 + 49691432 ACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTC
- i hg18.chr22 I 1123 C 0
- s panTro2.chr22 16107448 151 + 50165558 ACTGAGAAGTTCTAGGGGCAAGCCGGCGTGCAGAAAGAGGACCAGATTCCTGGGGTCAGTAACTAAGGATGACAATGGAGGACCCCAAGGGGCCCTCTGGGACAAAAATAGGACTGGGATGCACTATCTCAGAAACTGGATGCAGGAGCTC
- i panTro2.chr22 I 1115 C 0
- a score=21068.0
- s ponAbe2.chr22 13801397 55 + 46535552 ccagacaatgtaataacatagcaggtactgggggcatggtccctgtcctcatgac
- s hg18.chr22 16096670 55 + 49691432 CCAGACAATGTAATAACATAGCGGGTACTGGGGGTGTGGTCCCTGTCCTCATGAC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16107671 30 + 50165558 CCAGACAATGTAATAACATAGCAGGTACTG-------------------------
- i panTro2.chr22 C 0 N 0
- s rheMac2.chr10 61895453 33 + 94855758 ---------------------caggtactgGGGGTATGGTCCCTGTCCTCAGGA-
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 839 55 + 38599 GCAGACAATGTAACGACAAAGCGGGTACTGGGGGTATGGTCCCCGTCCTCGAGAC
- i calJac1.Contig13114 C 0 C 0
- a score=85688.0
- s ponAbe2.chr22 13804804 130 + 46535552 attacacgg----aaatacatttaggatatggaaggaaaggaacaacaaaggagggagaaccaacccagggcagg------gggtgcaggattgtttcccaccagaaacgacactcacaatgagatgcagggtggatagg
- s hg18.chr22 16096764 122 + 49691432 ATTACATGG----AAATACATTTAGGATATGGAAGGAAAGGAACAAcacaggagggagacccaacccagggcagg------gggtgcaggattgtttcccaccagaaatgacattcacaa--------aggatggatagg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16107765 130 + 50165558 ATTACACGG----AAATACATTTAGGATgtggaaggaaaggaacaacacaggagggagacccaacccagggcagg------gggtgcaggattgtttcccaccagaaatgacattcacaaagagatgcaggatggatagg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61895524 137 + 94855758 ATTACATGA-TATAGTTACATTTAGAACACGGAAGGAAAGGAACAAcacaggagggagaccccacccagggccgggggggagggggcaggattgtttcccgccggaaatgacgct--caatgagatgcaggatggatagg
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 65168 134 + 156393 ATTACATGGAAAGAATTACATTTAGGGTGTGGAAAGAAAGGAATAAAAcaggagagagatccaacccagagtagg------gggtgcagaattctttcccacaggaaatgactctgacagtgagaagcaggatggctaga
- i calJac1.Contig5889 I 317 I 8728
- a score=208716.0
- s ponAbe2.chr22 13804934 292 + 46535552 agttggccagcaggagaagcagcctttcaggcccaggg-gaaagtgtgtgcaaaggtcctgaggtgaaaagcttaagaaactgaaaaagggattggggtgggggggtagcaaagaaaagt-ggtGTgctgggcatggtagctcacacctataatcccagcactttgggaggcccagacaggaggatcacttgaggactggagtttaagaccagcctgggcaccacagggagaccacatctcta-aaacaaattaaaaaa----------------------ttagccaggcatggtggcatgcatctatagtcccag
- s hg18.chr22 16096886 288 + 49691432 agttggccagcaggagaagcagactttcaggcccagggagaaagtgtgttcaaaggtcctgaggtgaaaagcttaagaaactgaaagaggga------tggggggatagcaaagaAAAGT-GGTGTgctgggcatggtagctcacacctacaaccccagcactttgggaggcccaggcaggaggatcacgtgaggactggagtttaagaccaggctgggcaccacagggagaccacatctctacaaacaaattaaaaaa----------------------ttagccaggcatggtggcacgcatctatagtcccag
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16107895 287 + 50165558 agttggccagcaggagaagcagcctttcaggcccaggg-gaaagtgtgttcaaaggtcctgaggtgaaaagcttaagaaactgaaagaggga------tgggggggtagcaaagAAAAGT-GGTGTgctgggcatggtagctcacacctacaatctcagcactttgggaggcccaggcaggaggatcacgtgaggactggagtttaagaccaggctgggcaccacagggagaccacatctctacaaacaaattaaaaaa----------------------ttagccaggcatggtggcacgcatctatagtcccag
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61895661 279 + 94855758 agttggtcagcaggagaagcagcctttcaggcccaggg-gaaagtgtgtgcaaaggtcctgaggtgaaaaGCGTAAGGAACTGAAAGAGGGG------TGGGGGG-TAGCAAAGAAAAGT-GGTATGTTgggcatggtagcccacacctataatcccagcac-ttgggaggcccaggcaggaggatcacatgaagactggagttgaagaccagcctgggcaccacagggagaccacatctctacaaacaaattaaaaaa----------------------ttagccaggtgtggtggcacgtgtctgcag------
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 1051 307 + 38599 AGTCGGCCAGCAGGAGAAGCGGCCTTCCTGGGCCAGGG-GAAAGTGCGTGCAAAGGTCCTGAGGTAAAAGTCTTAAGGAACTGAAAGAGGAA------TGGGGG--TAGCAAAGAAAAGTAGGTAggccgggcatgatagctcacacctgtaatcccagcactttcggaggcccagacaggaggatcacgtgaggactggagtttaagaccagcctgggtgacagagtgacatctcatctcaa-aaagacaccaaagaaaGCGAGTAAAGAATATGTGATGTTTgccaggcgcggtggctcaagcctgtaatcccag
- i calJac1.Contig13114 C 0 I 127
- a score=742310.0
- s ponAbe2.chr22 13805226 1026 + 46535552 gtactcccagctactcaggaggctgaagtgggaggatcccttgagcccaggagttcgaggctgtggggagccatgatcgca-cactgcactacag-----cctg------ggtgac-gagtaagaccccatctcaaaaaaaaaaaaaaaaaa-------------------------------------------------------------------------agga----------------------------------------aaGTGAGTGAAGAATATGCAATGCCAAGTGAGAAGTGACAGCTCATATTAACCCCCATCTGGAAGCTGTGCTCCATCTGATGCAGAGAGAATAGAAAGAAATCCATCCCAGTGGATTGAAATAGCTCC------------tttttttttttgagacggagtttcactc--attgcccaggctggagtgcaatggtgtgatattagccca---------ccgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcctaagtagctgggattacaggcatgctccaccacatctggctaa-----ttttgtattttgggtagagatagggtttctccatgttggtcaggctggtctcgaactcccgacttcaggcgatccacccccc--ttggcctcccaaagtgctgggatttcaggtgtgagccaccatgcccggccCGAAATAGCTCTTAAATCTATTTTGTTGTTTATTAAAGCCATGGTTTGTGCTTTCCTGATCTTCCCAGAGTTCTAGGCCTTGCCTTGGCTTTTCATTCTGCTTCTCCCCAGCCCCTGAACCCAGCCTGGAGGACAGCCCTGGTTCTTTGGATGGATGGATGGATGTCTGTTTGATGATGAATG------------------------------------------------------TGCAGTCACTGCCCACCGTGAGTTTTTTGCAGTGGTGATAGAAGGCTTGGAGGGATGGGTACTTATCCCCAGTCAGTCATCAGAGAGCCCTTCAGGAGACATCACTCATTTCTGTCTCATAAT-GAAACTGAAAGTTGAGACCTCTGTGGAATAAAATAGGAAGGACAGAAAACTTCTGGTCCTGGGGCTGAGGTTGGGTGGT-GGGGA-GGGGGCAGGAAATTGGCTTCAGCCGAGACCCTGATTGTGCATGCCTTGAGAGGCCAAGCCCTGCGGTTAGCTGA
- s hg18.chr22 16097174 1029 + 49691432 gtactcccagctactcaggaggctgaggtgggaggatcccttgagcccaggagttcaaggctgtggggagccatgatcgca-cactgcactacag-----cctg------ggtgacagagtgagaccccatctc-aaaaaaaaaaaaaaaaa-------------------------------------------------------------------------agga----------------------------------------aaGTGAGTAAAGAATATGCGATGCCAAGTGAGAAGTGACAGCTCATATTAACCCCCATCTGGAAGCTCTGCTCCATCTGATGCAGAGAGAATAGAAAGAAATCCGTCCCAGTGGATTGAAACAGCTCC------tttttttttttttttttgagagggagtttcactc--attgcccaggctggagtgcgatggcgtgatcttagctca---------ccgcaacctccgcctcccagctttaagcgattctcctgcctcagcctcctaagtagctgggattacaggcatgctccaccacatccagctaa-----ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcaaactcccgacctcaggcgatccgcccccc-tttggcctcccaaagtgctggaatttcaggtgtgagccaccacgcccggccAGAAATAGCTCTTAAATCTATTTTATTGTTTATTAAAGCCATGGTTTGTGCTTTCCTGGTCTTCCCAGAGTTCTAGGCCCTGCCTTGGCTTCTCAGTTTGCTTCTCCCCAGCCCCTGAACCCAGCCTGGGGGACAGCCCTGGTTCTC----TGGATGGATGGATGTCTGTCTGCTGATGAATG------------------------------------------------------TGCAGTCACTGCCCACTGTGAGTTTTTTGCAGTGGTGATAGAAGGCTTGGAGGGGTGGGTACTTATCCCCAGTCAGTCATCAGAGAGCCCTTCAGGAGACGTCACTCATTTCTGTCTCATAAT-GAAACTGAAAGTTGAGACCTCTACGGAATAAAATAGGAAGGACAGAAAACTTCTGGTCCTGGGGCTGAGGTTGGGTGGT-GGGGA-GGGGGCAGGAAATTGGCTGCAGCCAAGACCCTTATTGTGCATGCCTTGAGAGGCCAAGCCCTGCAGTCAGCTGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16108182 1026 + 50165558 gtactcccagctactcaggaggctgaggtgggaggatcccttgagcccaggagttcaaggctgtggggagccatgatcgca-cactgcactacag-----cctg------ggtgacagagtgagaccccatctc---aaaaaaaaaaaaaaa-------------------------------------------------------------------------agga----------------------------------------aaGTGAGTAAAGAATATGCGATGCCAAGTGAGAAGTGACAGCTCATATTAACCCCCATCTGGAAGCTCTGCTCCATCTGATGCAGAGAGAATAGAAAGAAATCCGTCCCAGTGGATTGAAACAGCTCC-------ttttttttttttttttgagagggagtttcactc--attgcccaggctggagtgcgatggcgtgatcttagctca---------ccgcaacctccgcctcccaggtttaagcgattctcctgcctcagtctcctaagtagctgggattacaggcatgctccaccacatccagctaa-----ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcaaactcccgacctcaggcgatccgcccccc-tttggcctcccaaagtgctgggatttcaggtgtgagccaccacgcccggccCGAAATAGCTCTTAAATCTATTTTATTGTTTATTAAAGCCATGGTTTGTGCTTTCCTGATCTTCCCAGAGTTCTAGGCCCTGCCTTGGCTTCTCAGTCTGCTTCTCCCCAGCCCCTGAACCCAGCCTGGGGGACAGCCCTGGGTCTC----TGGATGGATGGATGTCTGTCTGATGATGAATG------------------------------------------------------TGCAGTCACTGCCCACTGTGTGTTTTTTGCAGTGGTGATAGAAGGCTTGGAGGGGTGGGTACTTATCCCCAGTCAGTCATCAGAGAGCCCTTCAGGAGATGTCACTCATTTCTGTCTCATAAT-GAAACTGAAAGTTGAGACCTCTACGGAATAAAATAGGAAGGACAGAAAACTTCTGGTCCTGGGGTTGAGGTTGGGTGGT-GGGGA-GGGGGCAGGAAATTGGCTGCAGCCAAGACCCTTATTGTGCATGCCTTGAGAGGCCAAGCCCTGCAGTCAGCTGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61895940 1072 + 94855758 ----tctcagctactcaggaggctgaggtgggaggatcccttgagcccaggagttcaaggctgtggggagccatgatcgca-cactgctctataggagtacctg------ggtgactgagtgagaccccatctc----aaaaaaaataaaca-------------------------------------------------------------------------agga----------------------------------------aaGTGAATAAAGAATATGCGATGCCAAGTGAGAAGTGACAGCTCATACTAACCCCCATCTGGAAGCTAGGCTCCATCTGATGCAGAGAGAACAGAAAGAAATCCATCCTAGTGGGTTGAAATAG-----------ttttttttttttttttgagacagcgtttcactc--tttgcccaggctggagtgcaatggcgtgatctccactcaccacaacctccacaacctccgcctcccaggttcaagtgattctcttgcctcagcctcttgagtagcagggattacagg-atgctccaccacacccggctaa-----ttttgtgtttttagtagagacagggtttctccatgttggtcaggctggtctcaaactcccgacctcagacgatccgctccccactcggcctcccaaagtgctggaatttcaggcgggagccaccacgcccggccCGAAATAGCTCTTAAATCCATTGTATTGTTTATTAAAGCCATGGTTTGTGCTTTCCTGATCT---CAGGGTTCTAGGCTCTGCCTTGGCTTCTCAGTCTGCTTTTCCCCAGCCCCTGAACCCAGCCTGGGGGACAGCCCCGGTTCTC--------TGGATGGATGTCTGCGTGAAGATGAACGtgcagacactgcccactgcgatttttttgcagacacttctcaccgtgagatttttgcagacactgcccactgtgagttttttgcagCAGTGATAGAAGGCTTGCAG----GGGTACTTATCTCCAGTCAGTCATCAGAGAGCCCTTCAGGAGACGTCACTCATTTCTGTCTCATAAT-GAAACTGAAAATTGAGACCTCTATGGAATAAAGTAGGAAGGACAGAAAA---CTGGTCCTGGGGCTGAGGTTGGGTGGCGGGGGA-GGGAGCAGGAAATTGGCTTCAGCCAAGACCCTGATTGTGCGTGCCTTGAGAGGCCAAGCCCTGCAGTCAGCTGA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 1485 1152 + 38599 atagtcccagctactcaggaggctgaggcagaagaattgcttgaaccagggaggcagaggttgcagtgagccaaggtcgcaccactgcactccag-----cctggcacctggcgacggagcaagactctgtctc---aattaaaaaaGGATATGTccgggcgcagtggctcacacctgtaatcctagcactttgggaggctgagatgggtggatcaccagaggtcaggagttcaagaccagcctggccaccatggtgaaaccccatcttaaaaaAAAAAAGAATATGTGATGCCAAGTAAGAAGTGACAGCTCATATGAACCCCCATCTGGAAGCTCTGCTCCATCTGATGCAGGGAGAATAGAAAGAAAGCCATCCCAAAGGATTGAAATAGttgttttttgttgttttgtttttatttgagacgcagttttgctcctgttacccaggctggagtgcaatggcatgatctcagctca---------ctacaacctccgcctcctgggttcagtcaattctcctgcctcagcctcccgagtagctgggactacaggcacgcgccaccatgcccagctaatttttttttgtatttttagtagagatggaatttcaccatgttgaccagggtggtctcgatctcttgacctca--tgatccacccacc--tcggcctcccgaagtgctgggattacaggcgtgagccaccgcgcccggccTGAAATAGTTCTTAAATCTGTTCTATTGTTTATCAAAGCCATGGTTTATGCTTTCCTGATCTTCCCAGGGTTCCAGGCCCCGCTTTGGCTTCTCCGTCTGCTTCT-CCAAGCCCCTGAACATGGCCTGGGGGATAGCCCTGGTCCTC--------TGGATGGATGTCTGTCTGATGACGAATG------------------------------------------------------TGCAGTCACTGCCCACTGTGAGTTTTTTGCGGTGGTGGCAGGAGGCTTGAGG--GTGGGTACTTATGCCCAGTGAGTCATCAGAGAGCCGTTGAGGAGTCATCACTCATTTCTGTCTCATAATAAAAACTGAAAGTTGAGTCCTCTACAGAATAAAATAGGAAGGGCAGAAAACTTCTGGTTCTGGGGCTGAGGTTGGGTGGC-GGGGACATGGGCAGGAAATTGACTTCAGCCTAGACTCCGGTTGTGTGTGGCTTGAGAGGCTGAGCCCAGCTGTCAGCTGA
- i calJac1.Contig13114 I 127 I 341
- a score=27399.0
- s ponAbe2.chr22 13806252 33 + 46535552 GCTTGCTATTTTAGGTGAGGAGATCAGCCTTCA
- s hg18.chr22 16098203 33 + 49691432 GCTTGCTATTTTAGGTGAGGAGATCAGCCTTCA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16109208 33 + 50165558 GCTTGCTATTTTAGGTGAGGAGATCAGCCTTCA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61897012 33 + 94855758 GCTTGCTATTTTAGGTGAGGAGATCAGCCTTAA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig5889 74030 33 + 156393 GCATGCAACTTCAGGTGAGGAGATCAGCCTTAA
- i calJac1.Contig5889 I 8728 n 341
- a score=409270.0
- s ponAbe2.chr22 13806285 517 + 46535552 GAATCAGCTTATGAGTCTTCAGACACCTGACGACAAT---GCAGAAAACAGGAGAGGAGGAGGGACTGGCCAGGGAGCCGGAGGCCTCCAAAGGGCCAGAGGAAAGGGCCCTTGTGGGCAACAGCGTAAACACCACCCAGAAGATGAGCGGGGACGACAGTTCAGGCCCTGCAAGAGGAATGTCTTCTGGTCAGAGTGTCAAGGCGGGTGGGTGCAGGGGCTTGGGGCCGAGTGGCAGCTTGCCCA-TCTGGTGACTGCAACTGACAGGCACCATTCACATGGACTGGGTT--------------GGTGTGCACTGGGGCTGACCAGTGTCCTACAGAAAAGCTGAGAATGCTTAGGCAGCACTGAAACAACATTTAGGTTCAGCAATGACACAGATTCACAGATTTAAGCAAAAGCCTCCATTTTCTGGGCCATCAAACTGCCCATGGACAAGTTGTGTACCCACAAGAGACTGTTACCACCCCAACTTGCCTCTAGCCTTAGAGATGTTAGAGTAAAAAACAAAAATCAGTGG
- s hg18.chr22 16098236 517 + 49691432 GAATCAGCTTATGAATCTTCAGACACCTGACGACAAC---CCAGAAAACAGGAGAGGAGGAGGGACTGGCCAGGGAGCCGGAGGCCTCCAAAGGGCCAAAGGAAAGGGCCCTTGTGGGCAAGAGCATAAACACCACCCAGAAGATGAGCGGGGATGACAGTTCAGGCCCCGCAAGAGGAATGTCCTCTGGTCAGAGTGTCAAGGCCGGTGGGTGCAGGGGCTTGGGGCCGAGTGGCAGCTTGCCCA-TCTGGTGGCTGCACCTGACAGGCACCGTTCACATGGACTGGGTT--------------GGTGTGCACTGGGGCTGACCAGTGTCCTACAGAAAAGCTGAGAATGCTTTGGCAGCACTGAGACAACATTTAGGTTCGGCAATGACACAGATTCACAGATTTAAGCAAAAGCCTCCATTTTGTGGGCCATCAAACTGCCCATGGACAAGTTGTGTACCCACAAGAGACTGTTACCACCCCAACTTGCCTCTAGCCTTAGAGATGTTAGAGTAAAAAACAAAAATCAGTGG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16109241 517 + 50165558 GAATCAGCTTATGAATCTTCAGACACCTGACGACAAC---GCAGAAAACAGGAGAGGAGGAGGGACTGGCCAGGGAGCCGGAGGCCTCCAAAGGGCCAAAGGAAAGGGCCCTTGTGGGCAAGAGCATAAACACCACCCAGAAGATGAGCGGGGATGACAGTTCAGGCCCTGCAAGAGGAATGTCCTCTGGTCAGAGTGTCAAGGCGGGTGGGTGCAGGGGCTTGGGGCTGAGTGGCAGCTTGCCCA-TCTGGTGGCTGCACCTGACAGGCACCGTTCACATGGACTGGATT--------------GGTGTGCACTGGGGCTGACCAGTGTCCTACAGAAAAGCTGAGAATGCTTTGGCAGCACTGAGACAACATTTAGGTTTGGCAATGACACAGATTCACAGATTTAAGCAAAAGCCTCCATTTTGTGGGCCATCAAACTGCCCATGGACAAGTTGTGTACCCACAAGAGACTGTTACCACCCCAACTTGCCTCTAGCCTTAGAGATGTTAGAGTAAAAAACAAAAATCAGTGG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61897045 531 + 94855758 GAATCAGCTTATGAATCTTCAGACACCTGACAACAAC---GCAGAAAACAGGAGAGGAGGAGGGACTGGCCAGAGAGCCGGAGGCCTCCAAAGGGCCAAAGGAAAGGGCCCTTGTGACCAAGAGCATAACCACCACCCAGAAGACGAGCGGGGACAGCAGTTCAGGCCCTGCAAGAGGAATGTCCTCTGGTCGGAGTGTCAAGGCGGGTGGGTGCAGGGGCTTGGGGTTGAGCGGCAGCTTGCCCA-TCTGGTGGCTGCACCTGAGAGGCACCATTCACATGGACTGGGTTGGTGGCACCCCTGGGGTGTGCACTGGGGCTGACCAGTGTCCTACAGAAAAGCTGAGAATGCTTTGGCAGCATTGAGACAACATTTAGGTTCGGCAATGACTCAGATTCCCAGATTTAAGCACAAGCCTCCATTTTCTGGGCCATCAAACTGCCCACGGACAAGTCATGTATCCACAAGAGACTGTCACCACCCCAACTTGCCTCTAGCCTTAGAGACGTTAGAGTAGAAAACAAAAATCAGAgg
- i rheMac2.chr10 C 0 I 3435
- s calJac1.Contig13114 2978 504 + 38599 gaaTCAGCTTATGAATCTTCAGACACCTGACGATGATGAAGCAGAAAACAGGAGAGGAGGAGGGACTGGCCAG---------------------------GGAAGGGGGCGTCACGGGCAAGAGCATAAACACCACCCAGATAATGA--GAGCACAGCAGTTAAGGGCCAGCCAGAGGAATGTCCTCTGGCCGGAGTGTCAAGGCGAGTGGGTGCAGGGGCTTGGGGCCAAATGGCAGCTTGCCCATTCTGGTGGCTGCACTTAAGAGGCACCATTCACATGGACTGGGTTGGTGGCACCCCGG-GGTGTGCAGTGGGGCTGACCAGTGTCCTACAGAAAAGCCGAGAATGCTTTAGCAGCATTGAAACAACATTTAGGTCTGGCAGTGACTCAGATTCACAGGTTTAAGCAAAAGCCCCCATTTTCTGGGCCATCAAACTACCCATGGACAAGCTGAATGCCCACAAGAGAGTGTTACCCCTGCAACTTGCCTCTAGCCTCAGAGATGTTCGAGGAAAACAC-AGAATCAGTGG
- i calJac1.Contig13114 I 341 C 0
- a score=797233.0
- s ponAbe2.chr22 13810659 1089 + 46535552 CTGTTGTGCGTCGCCTGTCTTTCTCCCAGACATTGTTGGAATTCCCACCTCCACATGCCCACCCCTAGATCCAGCTTCCTGGCTGGTGCCTGGGAGCGTGGCTTCTGCCCACCCACTGGCCTGGCCTCAGAGGTCTGCCCTACCC---------------TGATGCTAGCAACTGCTCAGACTAGGCAGCCCGTCGATGGAACTCCCTGATGCTGTCCTCCCATGCAAAGAGAATGGAGCCCTGGAAGAAGGCTCTCTGGAGTCACCCCAACACAACACCGTGTAAGCCTTGCACTTCCTTGCAGTGTGGCAGGGCACATCTCACATGGGTGCTTGCAGGGATGTGGAGGTGGGAATGTGAGAGGGTGGGGAGCGGTGTGGAGTGGCCAGGATCCAGGGGAGAATG-CCCCACGGAGACAGAGACCCTTGGCTTGGTATGAAGGGAG-CATAAGAAGGAGTAAATCCAGGACACGGCTAGGCTGTGGCACCCCTTTGGGAGTGCCCGCACATAGGGACACATGACCTT-GGGGAATTCTGGACAGCTTAGGGGCTTACTCCGTGACAGAAGATACTTCCCTTCTGGAGACCTCAACTTCTCTCtgtgttagttggctgaggctgccatcacacaatatcacaatcttggtgactcaaaacacagaaacgtatttcctcacagttccatgggctggaagtccaagaccaaactgttgacaagcttggtttcttctgaggcctctcctcagtgtgccaacaagcacccttgccgtctcttccccctccgaatttcctgttcccataaggacgcctgtcagattagattaggcccaccctaagggcctccttttaatttaatcacctctttaaaggtcctatctccaagtacagtcaccttttgaggtactgagcattaaggcttcaacacatgagtttggggccaggcgtggtggctcacacctataaccccaacacattaggaggctgagatgggaggatcccttgagcccaggaggtcgaggct-cagtgagctatgatcatgccacttcactccagcctgggcaacagagcaagacgctgtctcaaaaca---------------aaacaaaca---aaacaaaa
- s rheMac2.chr10 61901011 1090 + 94855758 ctgtttTGTCTCGCCTGTCTTTCTCCCAGACATTGTTGGAATTCCCACCTCCACGTGCCCACCCCTAGATCCAGCTTCCTGGCTGATGCCTGAGAGCGTGGCTTCTGCCTGTCCACTGGCCTGGCTTCAGGGGTCTGCGCTACCC---------------TGATGCTAGCAACTGCTCAAACTAGGCAGCCCGTGGATGGAACTGCCTGAAGCCGTCCACCCATGCAAAGAGAAGGGAGCCCTGAAAGAAGGCTCTCTGGAGTCACCCCAACACAACATCGTGTGAGCCTTGCACTTCTTTGCAGGGTGGCAGGGCACGTCTCACAT-GGTGCTTGCAGGGATGTGGAGGTGGGAGTGTGAGAGGCTGGGGAGGGGTGTGGAGTGGCCAGGATCCAGGGGAGAATGCCCCCACAGAGACAGAGACCCTTGGCTTGGTATGCAGGGAGCCATAAGAAGGAGTAAATCCAGGACACGGCTAAGCTGTGGCACCCCTTTGAGAGCGCCCACACATAGGGACACGTGACCTT-GGGGAATTCTGGACAGCTTAGAA--------------ATAAGATACTTCGCTTCTGGAGGCCTCA---CCTCTCtgtgttag-tggctggggctgccatcaccaaatatcacaatcttggtgactcaaaaaacagaaacgtattttctcacagctccataggctggaagtccaacatcaaagtgctgacaagcttggtttcttctgaggcctctcctcagtgtgccagcaagcacccttgctgtctcttcccactccgaatgtcctgttcccataaagtcgccagtcagattagattaggcccaccctaagggcctccttttaattcagtcacctctttaaagctcctatctccaagtacagtcaccgtttgaggcactgagcattagggctttaacacatgcgttttgggccaggtgtggtggctcacacctacagccccaacacactgggaggctgagatgggaggatcccttgagcccaggaggtcgaggct-cagtgagctatgatcgtgccactgcactccaacctgggcaacagagcaagaccccgtctcaaaataaataaataaataaataaataaataaataaataaat
- i rheMac2.chr10 I 3435 C 0
- s panTro2.chr22 16113512 1075 + 50165558 CTGTTGTGCCTCACCTGTCTTTCTCCCAGACATTGTTGGAATTCCCACCTCCACATGCCCACCCCTAGATCCAGCTTCCTGGCTGGTGCCTGGGAGCGTGGCTTCTGCCCGCCCACTGGCCTGGCCTCAGAGGTCTGCCCTACCC---------------TGACGCTAGCAACTGCTCAGACTAGGCAGCCCGTGGATGGAACTGCCTGATGCTGTCCTCCCATGCAAAGAGAATGGAGCCCTGGAAGAAGGCTCTCTGGAGTCACCCCAACAAAACACCGTGTGAGCCTTGCACTTCCTTGCAGTGTGGCAGGGCACATCTCACATGGGTGCTTGCAGGGATGTGGAGGTGGGAATGTGAGAGGGTGGGGAGGGGTGTGGAGTGGCCAGGATCCAGGGGAGAATG-CCCCACGGAGACAGAGACCCTTGGCTTGGTATGAAGGGAG-CACAAGAAGGAGTAAATCCAGGACACGGCTAGACTGTGGCACCCCTTTGGGAGTGCCCGCACTTAGGGACACATGACCTT-GGGGAATTCTGGACAGCTTAGGGGCTTACTCCATGACAGAAGATACTTCCCTTCTGGAGACCTCAACTTCTCTCtgtgttagttggctgaggctgccatcacacaatatcacaatcttggtgactcaaaaaacagaaacttatttcctcacagttccgtgggctggaagtccaagatcaaagtgttgacaagcttggtttcttctgagg-----cctcagtgtgccaacaaggacccttgctatctcttcccactccgaatttcctgttcccgtaaggacgccagtcagattagattaggcccaccctaagggcctccttttaatttaatcacctctttaaaggtcctatctccaagtacagtcaccttttgaggtactgagcattaaggcttcaacacacgagttttgggccaggagtggtggctcacacctataaccccaacgcattgggaggctgagatgggaggatcccttgagcccaggaggtcgaggct-cagtgagctatgatcgtgtcactgcactccagcctgggcaacagagcaagactctgtct-----ca-------------------aaaca---aaacaaaa
- i panTro2.chr22 I 509 C 0
- s hg18.chr22 16102504 1081 + 49691432 CTGTTGTGCCTCGCCTGTCTTTCTCCCAGACGTTGTTGGAATTCCCACCTCCACATGCCCACCCCTAGATCCAGCTTCCTGGCTGGTGCCTGGGAGCGTGGCTTCTGCCCGCCCACTGGCCTGGCCTCAGAGGTCTGCCCTACCC---------------TGACGCTAGCAACTGCTCAGACTAGGCAGCCCGTGGATGGAACTGCCTGATGCTGTCCTCCCATGCAAAGAGAATGGAGCCCTGGAAGAAGGCTCTCTGGAGTCACCCCAACAAAACACCATGTGAGCCTTGCACTTCCTTGCAGTGTGGCAGGGCACATCTCACATGGGTGCTTGCAGGGATGTGGAGGTGGGAATGTGAGAGGGTGGGGAGGGGTGTGGAGTGGCCAGGATCCAGGGGAGAATG-CCCCACGGAGACAGAGACCCTTGGCTTGGTATGAAGGGAG-CACAAGAAGGAGTAAATCCAGGACACGGCTAGACTGTGGCACCCCTGTGGGAGTGCCCGCACTTAGGGACACATGACCTTGGGGGAATTCTGGACAGCTTAGAGGCTTACTCCATGACAGAAGATACTTCCCTTCTGGAGACCTCAACTTCTCTCtgtgttagttggctgaggctgccatcacacaatatcacaatcttggtgactcaaaaaacagaaacttatttcctcacagttccctgggctggaagtccaagatcaaagtgttgacaagcttggtttcttctgagg-----cctcagtgtgccaacaaggacccttgctgtctcttcccactccgaatttcctgttcctataaggacgccagtcagattagattaggcccaccctaagggcctccttttaatttaatcacctctttaaaggtcctatctccaagtacagtcaccttttgaggtactgagcattaaggcttcaacacacgagttttgggccaggagtggtggctcacaactataaccccaacacattgggaggctgagatgggaggatcccttgagcccaggaggtcgaggct-cagtgagctatgatcgtgtcactgcactccagcctgggcaacagagcaagactctgtctcaaaaca-------------------aaaca---aaacaaaa
- i hg18.chr22 I 509 C 0
- s calJac1.Contig13114 9064 1050 + 38599 ----------TCACCTGTCTTTCTCCCAGGCATTGTCGGCATTCCCACCTCCACATGCCCAGGTTTGTATTCAGCTTCCTGGCTGGTGCCTGAGAGCACAGCTCCTGCCTGCCCACTGGCCTGGCCTCAGAGATctgccctgccctgccctgccctgccGTGACGCAAGCAACTGCTCTAACTAGGCAGCCTGTGAACTGGACCGCCTGCTGCTGTCCCCCTGCGCAAAGAGAATGGAGCCCGGGGAGAAGGCTCTCTGGCGTCACCCCAACACAGTACTGCGTGAGGCTTGAGCTTCTTTGCAGTGTGGCAGGGCATATCTCATGTGGATGTTTGCAGGGATGTGGAGGGGGGAGTGTGAGAAGGTGGGGAGGGGTGTGGAGAGGCCAGGATCCAGGAGAGAATG-CCCTACAGACACAGAGACCCTTGGCTTGGCATGCAGGGAG-CAT---AAGGAGTAAACCCAGGAC--------GCTGTGGCAGCCCTTTGGGAGCACCCACACATAGGGACACACGGCCTT-GGGGATTTCCAGACAGCTCAGGGGCTTACT-CGTGGTAGAAGAGGCTTCTTTCCTGGAGGCCCCAACTTCTCTC----ttagtcggctgaagctgccatcacaaaatatcgaaatctgggtgactcagacaacgaaaatgt----------agttccagagtct-gaagtgcaaggtcaacgtgctgacaagcttggtttcttctgaggcttctcctctgtgtgccagcaagcacccttgcggcctcttccaactccgagtttcctgttcccgcaaggacgtcagtcacgttggattaggcctaacctaacg----------------atcacctgtttagaggttctgtctccaaggacaggcacctcgtgaggtcctgaaggcta-gccttcaacacatcagtttCCGgccaggcgcggtggctcatgcctataatcccaacacatccgga-actgaggtgggaagatcccttgagcccgggaggtcgaggctgcagtgagctatgttggtgccactgcgttccagcctgggccacacagcaagaccgtgtctcaaaaaa---------------aaaaaaaaa---aaaaaaaa
- i calJac1.Contig13114 I 831 I 141
- a score=204630.0
- s ponAbe2.chr22 13811748 273 + 46535552 caaaaAAACC---CCATGAATTTTGGGGGAGACACCACTCAGCCAGCAACACTGCAAGTAAGGAATACTAATACCAACCTATTTCACTAGTTGAAGGAAGTGATTTCAGAAGAGAGGGCAGAGATTTGTCATAATCAGCAGACCAAGTTTAGATGTAAGTACCTCCTGCAAAATTTCAGAAAGATCTGTCTTGCCCTTTGTTAACAG-AAAAAAAtcactccttcatgcaagcatttattgagtgcctctctctgccaag----------------------------------ttggctcaccgcaatgc
- s calJac1.Contig13114 10269 308 + 38599 CAAAAAAAACAAAACATGAGTTTTGGGAGAGACACCATTCAGCTAGCAACACTGAAAGTAAGGAATACGAATACCAATCTATTTCACTCGTGGAAGGAAGTGACTTCAAAAGAGAGGGCAGAGATTTGTCACAATCAGCAGACCAAGTTCAGATTTAAGTACCTCCTCCAAAGTTTCAGAAAGGTCTGTCTCGTCCTTGGTTAATAG-AAAAAAATGGCTCCTTCAGGCGAGCATTCATTGAGTGC--CTCTGTGCCACGCAGCGCGAAAGTAAACCTGTAAGAGCGGAGGCCCTTGGCGCACCGCAGTGC
- i calJac1.Contig13114 I 141 C 0
- s rheMac2.chr10 61902101 306 + 94855758 taaaaaaa-----ccatgaattttgggggagacaccattcagccagcaacCCTGTAAGTAAGGAATACTAATACCAACCTATTTCACTAGTTGAAGGAAGTGATTTCAGAAGAGAGGGCAGAGATTTGACACAATCAGCAGACCAAGTTTAGATTTAAGTACCGCTTGCAAAATTTCAGAAAGGTCTGTTTTGTCCTTTGTTAATAGAAAAAAAAtcactccttcatgcaagcatttattgagtgcctctctgtgccaagcattgtgAAAGTAAAGCTATAAAAGCTGAGAACTCTGGCTCACCACAATGC
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16114587 273 + 50165558 caaaacaaaC---CCATGAATTTTGGGGGAGACACCACTCAGCCAGCAACACTGTAAGTATGGAATACTAACACCAACCTATTTCACTAGTTGAGGGAAGTGATTTCAGAAGAGAGGGCTGAGATTTGTCATAATCAGCAGACCAAGTTTAGATGTAAGTATCTCCTGCAAAATTTCAGAAAGATCTGTCTTGTCCTTTGTCAACAG-AAAAAAAtcactccttcatgcaagcatttattgagtgcctctctgtgccaag----------------------------------ttggctcactgcaatgc
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16103585 272 + 49691432 caaaacaaaC---CCATGAATTTTGGGGGAGACACCACTCAGCCAGCAACACTGTAAGTATGGAATACTAATACCAACCTATTTCACTAGTTGAGGGAAGTGATTTCAGAAGAGGGGGCTGAGATTTGTCATAATCAGCAGACCAAGTTTAGATGTAAGTACCTCCTGCAAAATTTCAGAAAGATCTGTCTTGTCCTTTGTCAACAG--AAAAAAtcactccttcatgcaagcatttattgagtgcctctctgtgccaag----------------------------------ttggctcactgcaatgc
- i hg18.chr22 C 0 C 0
- a score=212823.0
- s ponAbe2.chr22 13812021 233 + 46535552 agatattatctgatctaatcAAGGGGTATTTATTGAGTGGTGTTG--GAGGTTAAAGGAGTATCAAACAAACTTGACCCCAGTCCCGAAGGAGCTTGTAATTCTTGCTGGAAAGGCAAGACCAACTCACAGGAAACAACAGGAACAGCAGCAGGTGATATATAACTGAGTTCTAAATTGTGTGGTGCAAACTTCAATTGCTGCTGGAATTGGGAATGAGGAAGATCAATGAGGGA
- s hg18.chr22 16103857 233 + 49691432 agatattatctgatctaatcAAGGGGTATTTATTGAGTGGCGTTG--GAGGTTAAAGGAGTATCAAACAAACTTGATCCCAGTCCTGAAGGAGCTTGTAATTCTTGCTGGAAAGGCAAGACCAACTCATAGGAAACAACAGGAACAGCAGCAGGTGATATACAACTGAGTTCTAAATTGTGTGGTGCAGACTTCAATTGCTGCTGGAATTGGGAATGAGGAAGATCAATGAGGGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16114860 233 + 50165558 aaatattatctgatctaatcAAGGGGTATTTATTGAGTGGCGTTG--GAGGCTAAAGGAGTATCAAACAAACTTGATCCCAGTCCTGAAGGAGCTTGTAATTCTTGCTGGAAAGGCAAGACCAACTCATAGGAAACAACAGGAACAGCAGCAGGTGATATACAACTGAGTTCTAAATTGTGTGGTGCAGACTTCAATTGCTGCTGGAATTGGGAATGAGGAAGATCAATGAGGGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61902407 231 + 94855758 AGATATTGTCTGATCTAATCAAGAGG----TATTGAGTGGTGCTGGAGAGGTTAAAGGAGTATCAGACAAACTTGATCCCAGTCCCAAAGGAGCTTGTAATTCTTGCCGGAAAGGCAAGACCAACTCGTAGGAAACAACAGGAACAACAGCAGGTGATATATAACTGAGTTCTAAATTGCGTGGTGCAGACTTCAATTGCTGCTGGAATTGGGAATGAGGAAGATCAATGAGGGA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 10577 230 + 38599 AGATACCGTCTGATCTGATCAAGAGGTATTTATTGAGTGGTGTTG--GAGGTTAAAGGAGTATCAGACAAACTCGATCCCAGTCCCGAAGGAGCTTGTAAATCTTGCTGGGAAGGCAAGAGCCACTGGTATG--ACACCAGGAACAACAGCAGGTGATCTATAACTGAGTTCTACATTGTGTGGCG-GGACTTCAATTGCTGCTGGAATTGGGAATGAGAAAGATCAATGAGGGA
- i calJac1.Contig13114 C 0 C 0
- a score=81745.0
- s ponAbe2.chr22 13812254 101 + 46535552 GAGGGTCAGCACCAGCTAAATCACTTAGACTGATGCATTCATTAGCCTGAGCCATTGTTCACGCCGCAGACTTTCTGTTCAAAATGGTAAAAGCCAGTCCG
- s hg18.chr22 16104090 101 + 49691432 GCGGGTCAGCACCAGCTAAATCACTTAGACTGAGGCATTCATCAGCCTGAGCCATTGTTCACGCTGCAGACTTTCTGTTCAAAATGGTAAAAGCCAGTCCG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16115093 101 + 50165558 GCGGGTCAGCACCAGCTAAATCACTTAGACTGAAGCATTCATCAGCCTGAGCCATTGTTCACGCTGCAGACTTTCTGTTCAAAATGGTAAAAGCCAGTCCG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61902638 101 + 94855758 GCGGGTCGGCACCAGGTAAATCACTTCGACTGAAGCATTCATGAGCCTGAGCCATTGTTCACGCTGCAGACTTTCTGTTCAAAATGGTAGAAGCCAGTCCG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 10807 101 + 38599 GCGGGCTGGCACCAGCTAAATCACTCAGACCGGAGCGTTTGTTAGCACGAGCCATTGTTCACGTTGCAGACTTTCTGCTCCAAATGGTAAAAGCCAGTCTG
- i calJac1.Contig13114 C 0 I 322
- a score=598795.0
- s ponAbe2.chr22 13812669 795 + 46535552 CCAAAAGCCTCAATCACAGGGATGACTCAAGACCTCGAGTTTCATTTCATGTTTCTAATGCCATGAGACAACCGTGGGCCTCGCCCTGCTCAGCAGAGTCCTACCCCCAACTTTCTCCACTCAGCTTCCCCTACTCAGGGTACATGGAAAAGGGGTTCCCCACCACAATTCTATGGCCACACCCCAGGGGGCAAGTTCAACCAACAGGCCAGGCGAATGAGCCCCACCTGTGCCCCATTCCCACCTGATCGGACCCCGCAGCCCTTTGGGAGCACTCAGATACTGGTGAGAATGCCCCTGTTTGCTTGAGGGGCCCGTGGCTACTTGTTGACCGCACAGGGCATCTGTTGAGAAGATGCACGCAGGGGAGGGAAGGAGAGAAAGACAAGAGGAGCCTATGCGATTGGCGAGAAGACATAGAGGACAGAGAACATGGGGAACTGAGGACTAGAACGGATTTCTAGCCTGACCCATTCTGGG----GGACTCCTTTTAGACCAGGGGTCTGCGTTGGCCCGTGAGTGCAGCTGAGCTCTCTCCACCTCTCTTCAGCCTCTTCTGCCACTCTGAAAGGCCCCAGGTTTTATTTCCGGTTCACATTGCTGCACCCATAACCCAGGGAATGTGGCAGCCCCTGCTGGGATTTCACACGTGTGCAGAGGGTGCCTCTGGGTGGGGCTTCATTCCTCTATGGGTCACGAGTCCCTGGGCAGTGACCACGCCCTAGTGACAGCCAGAGTGCCTTTCATTCCAAGTGCTATATTAGCCAGTATCTTAAAAACCTGGTCTGGAGCCGGG
- s hg18.chr22 16104501 789 + 49691432 CCAAAAGCCTCAGTCACAGGGATGACTCAGGACCTTGAGTTTCATTTCATGTTTCTAATGTCATGAGACAACCGTGGGCCTCGCCCTGCTCAGCAGAGTCCTACCCCCCACTTTCTCCACACAGCTTCCCCTACTCAGGGTACATGAAAAAGGGGTTCCCCACCACAACTCTATGGCCACACCCCAGGGGGCAAGTTCAACCAACAGGCCAGGCGAATGAGCCCCATCTGTGCCCCATTCCCACCTGATCGGACCCCACAGCCCTTTGGGAGCACTCAGATACTGGTGAGAATGCCCCTGTTTGCTTGGGGGGCCCGTGGCTACTTATTGACGGCACAGGGCATCTGTTGAGAAGATGCAGGCAGGGGAGGGAAGGAGAGAAAGACAAGAGGAGCCTATGCAATTGGCGAG-AGACACAGAGGACAGAGAACATGGGGAACTGAGGACTAGAACGGATTTCTGGCCTGACCCGTTCTGGG----GGACTCCTTTTAGACCAGGGGTCTGTGTTGGCCCGTGAGTGCAGCTGGGCTCTCTCCACCTCTTTTCAGCCTCCTCTGCCACTCTGAAAGGCCCCAGGTTTTATTCCCGGTTCACATTGCCGCACCCATAACCCAGGGAATGTGGCAGCCCCTGCTGGGGTTTCACAGGCGTGCAGAGGGTGCCTCTGGGTAGGGCTTCATTCCTCTATGGG-CAGGAGTCCCTGGGCACTGACCACGCCCTAGTGACAGCCAGAGTGCC-TTCATTCCAAGTGCTATATTAG-CAGTATCTTAAAAACCT-GTCT-Gagccggg
- i hg18.chr22 C 0 I 1616
- s panTro2.chr22 16115505 793 + 50165558 CCAAAAGCCTCAGTCACAGGGATGACTCAAGACCTCGAGTTTCATTTCATGTTTCTAATGTCATGAGACAACCGTGGGCCTCGCCCTGCTCAGCAGAGTCCTACCCCCCACTTTCTCCACACAGCTTCCCCTACTCAGGGTACATGAAAAAGGGGTTCCCCACCACAACTCTATGGCCACACCCCAGGGGGCAAGTTCAACCAACAGGCCAGGCGAATGAGCCCCATCTGTGCCCCATTCCCACCTTATCGGACCCCACAGCCCTTTGGGAGCACTCAGATACTGGTGAGAATGCCCCTGTTTGCTTGGGGGGCCCGTGGCTACTTATTGACGGCACAGGGCATCTGTTGAGAAGATGCAGGCAGGGGAGGGAAGGAGAGAAAGACAAGAGGAGCCTATGCAATTGGCGAG-AGACACAGAGGACAGAGAACATGGGGAACTGAGGACTAGAACGGATTTCTGGCCTGACCCATTCTGGGGGACGGACTCCTTGTAGACCAGGGGTCTGTGTTGGCCTGTGAGTGCAGCTGGGCTCTCTCCACCTCTTTTCAGCCTCCTCTGCCACTCTGAAAGGCCCCAGGTTTTATTCCCGGTTCACATTGCCGCACCCATAACCCAGGGAATGTGGCAGCCCCTGCTGGGGTTTCACAGGTGTGCAGAGGGTGCCTCTGGGTAGGGCTTCATTCTTCTATGGG-CAGGAGTCCCTGGGCAGTGACCACGCCCTAGTGACAGCCAGAGTGCC-TTCATTCCAAGTGCTATATTAG-CAGTATCTTAAAAACCT-GTCT-Gagccggg
- i panTro2.chr22 C 0 I 2380
- s rheMac2.chr10 61903042 771 + 94855758 CCAAAAGCCTCAATCACAGGGATGACTCAAGACCTCGAGTTTCATTTCATGTTTCTAATGTCATGAGACAACCGTGGGCCTTGCCCTGCTCAGCAGAGTCCTACCCCCCACTTTCTCCATTCAGCTTCCCCTACTCAGGGTACATGAAAAACG-----------------CTATGGTCACACCTCAGGGGGCAAGTTCAACCAACGGGCCAGGCAAATGAGCCCCATCTGTGCCCCATTCCCACCTGATCGGACCCCGCACCCCTTTGGGGGTGCTCAGATACTGGGCAGAATGCCCCTGTTTGCTTGGGGGGCCCATGGCTACTTGTTGACTGCACAGGGCATCTGTTGAGAAGATGCAGGCA-AGGAGGGAAGGAAAGAAAGACAAGAGGAGCCTGTGGAATTGGCGAG-AGACACAGAGGACAGAGAACATGGGGAACTGAGGACTAGAACGGATTTCTGGCCTGACCCACTCTGGG----GGATCCCATTTAGACCAGGGGTCTGCATTGGCCCGTGAGTGCAGCTGGGCTGTCTCCACCTCTCTTCAGCCTCCTCTGCCACTCTGAAAGGCCCCAGGTTTTATTCTCCGTTCACATTGCTGCACCCATAACCCGTGGAATGTGGCAGCTCCTGCTGGGGTTTCACAGGTGTGCAAAGGGAGCCTCTGGGTGGGGCTTCATTCCTCTATGGG-AGGGAGTCCCTGGGCAGTGACCACGCCCTAGTGACAGCCAGAGTGCC-TTCGTTCCAAGTGCTTTATTAG-CAGTATCTTAAAAACCT-ATCT-Gagccagg
- i rheMac2.chr10 C 0 I 1889
- s calJac1.Contig13114 11230 760 + 38599 caaagtgctgggattacaggcttgagccactgcgcccggccTCATTTCATGTTTCTAACCTCATGAGACAGCCATGGGCCTCATCCTGCTCAGC--AGTCCTACCCTTGACTTTCTCCACTCAGCTTCCCCTGCTGAGGCTACATGAAACAGGGGTTCCCCACCACAACTCTACATCCACACCCCAGGGGGCAAGTTCAACCAGCAGTCCAGGCCAGTGAGCCACACCTGCACCCCATTCCCACCTGACTGGACCCAGCAGCCCTGCAGGA-CACTCAGTTACGAGTCAGAATGCCCCTGTTTGCTTGGGGGGCCCGTGGCTACTTGTTGACTGCACAGGGCACCTGTTGAGAAGATGCAGGAAGTGGGGGGC-----AGAAAGACAGGAGGAGCCCATGGAATTGGCGAG-AGACACAGAGGACAGAGAACATGGGGAACAGAGAACTAGAACGGATTTCTGGCCTGACCCATTC-GGG----GCACCCCTTTTAGACCGAGGGTCTGCACTGGTCCATGAGTGCAGCTGGGCTCCCTCTACCGCTGTTCAGCCTCCTCTGCCATGCTGAAAGGCCCCAGATTTTAGTTCCTGTTCAGGTTGCTGCACCCATAACCTGGGGAATGTGGCA---CCCGCCAGGGTTTCACAGATGTGCAGAGCGTGGCTCTGGGTGGGGCTCCGTTCCTCCATGGG---------------CAGTGACCACGCCCTAGAGACGGCCAGAGTGCC-TTCATTCCAAGTGCTATATTGG-GAGTATCTTAAAAACCT-GTCT-GAAAC---
- i calJac1.Contig13114 I 322 I 1142
- a score=813164.0
- s ponAbe2.chr22 13832752 1104 + 46535552 gtcaggagttcaagaccaccctggccaacatggtgaaacccagtctctactaacaatacaaaaattagccagacatggtagcacgcctctatagtcccaactactcaggaggccgaggcaggagaattgcttgaacccgggagatggaggttgcagtgagccaagatcccgccactgcactccagcctgggtgccagagcgagactc--tttcaaaaaat-------------aaaataaaataaaataaCagagagaaagacagaggccaaataggcaaatatggtaaaaagtttatctttgttgaatctaggtggtcaattatgtgcatattctttccaacttcctctatgtttgaaatctgccataataataagtttgaaaactaGATGGAGATGTAAAGACAGGGCCTCTCAGCTGATGGTGTTTGCCTACCTCGTTCCCTCTCTTGGTCTTCTGCCGAGATATTGGCCCCGCTGCTATTCCAGCCTGGATCCCCTGAGGCTTGAACGAGCTTAGGGACTGGCTGGGCCTCTAGAATCAGACCAGGAAACACTGGATCTGGGGCTGGACAACTAAGGCAGGATTCTTAATTGGTATATTAGAGATGAAGACAAACATGTCTCCCATAAGGGCAGCCTTTGGGAGACACAGCCCCTACACAGAAAAGCAAGAGTCCCTCCTGGGCATTTCTCGCAGTGTGAAGAGGAACACA----------------------------------------------------------------------------------------GTAAAAGGATTAG-A-GCAAGGATGGACTCAGAATTTAGAGCCATTTACAAGGGTACAAAATCATTCCTGGCTACAAAGGGTAAAAATGAGAAAAGAGGGTAAAATGAGAAATGAATgtggtgactcattcctgtaatcccagcactttggaagaccaaggcgggtggatcacttgaggtcaggagttcaagaccagcctggccaaca-------------tggtgaaacctccgtctctactaaaaatacaaaaattagctgggcatggtggtgcgcgcctataatcccagctgctagggaggctgaagcaggagaatcgcttgaacaaaggaggcagaggttgcaatgagccgagattgcaccactgcactccagcctgggtgac-agagtgagact--gtctc---caaaaaaaaaaaaaaa
- s panTro2.chr22 16129884 1103 + 50165558 gtcaggagttcaagaccaccctggccaacctggtgaaacccagtctctactaacaattcaaaaattagccggacatggtagcacgcctctatagtcccaactactcaggaggctgaggcaggagaattgcttgaacccgggagatggaggttgcagtgagccaaaatcccgccactgcactccagcctggatgccagagcgagactc--tttcaaaaaat-------------aaaataaaataaaataaC----AGAAAGAGAGAGGCCAAATAGGCAAATATTGTAAAAAGTTTATCTTTGTTGAATCTAGGTGGTCAATTATGTGCATATTCTTTCTAACTTTCTCTATGTTTGAAATTTGCCGTAATAATAAGTTTGAAAACTAGATGGAGATGTAAAGACAGGGCCTCTCAGCTGATGGTGTTTGCCTACCTGGTTCCCTCTCTTGGTCTTCTGCCCAGATATTGGCCCCACTGCTATTCCAGCCTGGATCCCCTGAGGCTTGAATGAGTTTAGGGACTTGCTGGGCCCCTAGAATCAGACCAGGAAACACTGGATCTGGGGCTGGACAACTAAGGCAGGATTCTTAATTGGTATATTAGAGATGAAGACAAACATGTCTCCCATAAGGGCAGCCTTTGGGAGACACAGCCCCTACACAGAAAAGCGAGAGTCCCTCCTGGGCATTTCTCCCAGTGTGAAGAGGAACACA----------------------------------------------------------------------------------------GTAAAAGGATTAGCA-GCAAGGATGGACCCAGAATTTAGAGCCATTTACAAGGGTACAAAATCATTCCTGGCTACAAAGGGTAAAAATGAGAAAAGAGGGTAAAATGAGAAATGAAcgcggtggctcacgcctgtaatcccagcactttggaagaccaaggcgggcggatctcttgaggtcaggagttcaagaccagcctggccaaca-------------tggtgaaacccccgtctctactaaaaatacaaaaattagctggacatggtggtacgcgcctataatcccagctactagggaggctgaagcaggaaaatcacttgaacaaaggaggcagaggttgcaataagccgagattgcgccaccgcattccagcctgggtgac-agagtgagact--gtctc-aaaaaaaaaaaaaaaaaa
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16113458 1105 + 49691432 gtcaggagttcaagaccaccctggccaacctggtgaaacccagtctctactaacaattcaaaaattagccggacatggtagcacgcctctatagtcccaactactcaggaggctgaggcaggagaattgcttgaacccgggagatggaggttgcagtgagccaaaatcccgccactgcactccagcctggatgccagagcgagactc--tttcaaaaaat-------------aaaataaaataaaataaCAGAGAGAAAGAGAGAGGCCAAATAGGCAAATATTGTAAAAAGTTTATCTTTGTTGAATCTAGGTGGTCAATTATGTGCATATTCTTTCTAACTTTCTCTATGTTTGAAATTTGCCGTAATAATAAGTTTGAAAACTAGATGGAGATGTAAAGACAGGGCCTCTCAGCTGATGGTGTTTGCCTACCTGGTTCCCTCTCTTGGTCTTCTGCCCAGATATTGGCCCCACTGCTATTCCAGCCTGGATCCCCTGAGGCTTGAATGAGTTTAGGGACTTGCTGGGCCCCTAGAATCAGACCAGGAAACACTCGATCTGGGGCTGGACAACTAAGGCAGGATTCTTAATTGGTATATTAGAGATGAAGACAAACATGTCTCCCATAAGGGCAGCCTTTGGGAGACACAGCCCCTACACAGAAAAGCGAGAGTCCCTCCTGGGCATTTCTCCCAGTGTGAAGAGGAACACA----------------------------------------------------------------------------------------GTAAAAGGATTAGCA-GCAAGGATGGACCCAGAATTTAGAGCCATTTACAAGGGTACAAAATCATTCCTGGCTACAAAGGGTAAAAATGAGAAAAGAGGGTAAAATGAGAAATGAAcacggtggctcacgcctgtaatcccaacactttggaagaccaaggcgggcggatctcttgaggtcaggagttcaagaccagcctggccaaca-------------tggtgaaacccctgtctctactaaaaatacaaaaattagctgggcgtggtggcacgcgcctataatcccagctaccagggaggctgaagcaggaaaatcacttgaacaaaggaggcagaggttgcaataagccgagattgtgccactgcactccagcctgggtgac-agagtgagact--gtctc---aaaaaaaaaaaaaaaa
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61913078 1104 + 94855758 gtcaggagttcaagaccaccctggccaacatggtgaagcccagtctctattaacaatacaaaaattagccagacatggtggcacgcctctatagtcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggc-gttgcagtgagccaagttcctgctactgcactccagcctgggtgccagagtgagactc--tgtgtcaa----------------aaagtaaaataaaataacagagagaaaGACAGAAGCCAAATAGGAAAATACGCTAAAAAGTTTATCTTTGTTGAATCTAGGTGGTCAATGATGTGCATATTCTTTCTAACTTTCTCTATGTTTGAAATTTTCCATAATAATAAGTTTGAAAACTAGATGGAGATGTAAAGACAGGGCCTCTCAGCTGATGGTGTTTGCCCACTTGGTTCCCTCTCTTGGTCTTCTGCCCAGATATTGGCCCCGCTGCTATTCCAGCCTGGATCCCCTGAGGCTTGAATGAGCTTAGGGACTGGCTCGGCACCTAGAATCGCACCAGGAAACACTGGATCTGGGGCTGGACAACTAAGGCAGGATTCTTAATTGGTATATTAGAGATGAAGACAAACATCTCTCCCATAAGGGCAGCCTTTGGGAGACACAGCCCCTACACAGAAAAGCAAGAGTCCCTCCTTGGCATTTCTCCCAGTGTGAAGAGGAACACA----------------------------------------------------------------------------------------GTAAAAGGATTAACA-GCAAGCATGGACCCAGAATTTAGAGCCATTTACAAGGGTACAAAATCATTCCTGGCTACAAAGGGTAAAAATGAGAAAAAAGGGTAAAATGAGAAAATAgcgtggtggctcacacctgtgatcccagcactttgggaggccaaggtgggtggatcacttgaggccaggagttcaagaccagcctggccaaca-------------tagtgaaacc-ccgtctctactaaaaatacaaaatttagctgggtgtggtggcgcacgcctataatcccagctactagggaggctgaagcaggagaatcgcttgaacaaaggaggcagaggttgcagtgagccgagattgtaccactgcattccagcctggg-gac-acagtgagactccatctcaaaaaaaaaaaaaaaaaaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 13132 1175 + 38599 gtcaggagttcgagaccagcctggccaacatggcaaaaccccgtctctactaacaatacaaaaattagccggacgtggtggcatgtccctacagtcccaactactcaggaagctgaggcaggaaaatcgcttgaaccca---------------cttgagccaagatccggcctctgcactccagccagggtgacagagagagactctatatcaaaaaactaacgtaaaataaaaaGTAAGATAAAATAAC------AGAGAGAGAGGCCAAAT-GGCAAATA-GGGAAAAAGTCAATCTTTGTTGAAACTAGGTGACCAATTACGTACACATTCTTTTTAACTTTCTGCATGTTTAAAACCTGCCACAATCATAAGTTTGAAAAGTGGATGAAGATGTAAACCCAGGGCCTCTCGGCTGATGGCGTTTGCC-ACCCGGCTCCCTCTCTCAGTCTTCTGCCCAGCAATTGGCTCCACAGCTATTCCAGCCTGGGTCTCCTGAGGCTTGAATGAGCTGAGGGACTGGCTGAGCCCCTAGAATCAGACCAGGAAACACTGGATCTGGGGCTAGACAACTAAGGCAGGATTCTTAATGGGTATTTTGGAGATGAGGACAAACATCTCTCCCCTAAGGGCAGTCTTTGGGAGACA---GCTCCACACAGAAAGGCAAGAGTCCCTCCTGGGCGTTTCTCCCAGTGTGAAGGGGAAAGCAGGCAAGGGTCCCTCCTGGGCATTTCTCCCAGTGTGAAGGGTGTGAAGAGGAAAGCAGGCAAGGGTCCCTCCTGGGCGTTTCTCCCAGTGTGAAGAGGAAAGCAGGCAAGGATGGACCCAGTAGCAAGAGCCACTTACAAGGGTACAGAATCATTCCCGGCTACAATGATTAAaaaaatgagaaaaaggc----tggg--------gtggtggcacacacctgtaatcccagcattttgggaagccaaggcaggcggatcacctgaggtcgg--------agccagcctggccactatcaattacttttttagtagaaacctcatctctactaaaaatacaaaa-ttgacccggcgttgtactgggcacctataatcccagctactcggaaggctgaggcaggagaatcacttgaacctgggaggcggaggttgagatgagccaagattg--ccattgcactccagcctgggcaacaagagcaaaactccatctc---aaaaaaaaaaaaaaaa
- i calJac1.Contig13114 I 1142 I 163
- a score=19482.0
- s ponAbe2.chr22 13833856 27 + 46535552 aaaaagagagagaaAGAAAGATAAAAG
- s panTro2.chr22 16130987 27 + 50165558 agagagagagaGAAAGAGAGATAAAAG
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16114563 27 + 49691432 agagagagagagaaAGAGAGATAAAAG
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61914182 27 + 94855758 agaaagaaagaGAGAGAGAGATAAAAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 14470 27 + 38599 gaaaaaagagagaaaGAGAGAAGAgag
- i calJac1.Contig13114 I 163 I 146
- a score=204846.0
- s ponAbe2.chr22 13833883 356 + 46535552 AATAAAAGTTTAggccaggcgcagtgtctcatgcctgtaatcctagcactttgggaggccaaggcaggcagatcacg--aggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaa-aaaaaaaaaaaaaaattagctgggcatggtggcaggcgcctatagtcccaggtactcgggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttgcagtgaaccgagatcacgtcactgcactccagcctgggggacacc-acagcgagactccgtctc-aaaaaaaaaaaaaaa-aaaaGGTTagccgggtgtg---gtggctcatgtct
- s panTro2.chr22 16131014 356 + 50165558 AATAAAAGTTTAggacgggcgcagtggctcacgcctgtaatactagcactttgggaggccaaggcaggcagatcacc--aggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctttactaaaaatacaaaaaaaaaaaaaaaaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgagacaggagaatggtgtgaacctgggaggcagagcttgcagtgagccgagatcgcgtcactgcactcaagcctggagga---c-agagcgagactccgtctcaaaaaaaaaaaaagaataaaaGGTTagctgggtgtg---gtggctcacgtct
- i panTro2.chr22 C 0 I 62
- s hg18.chr22 16114590 348 + 49691432 AATAAAAGTTTAggacgggcgcagtggttcacgcctgtaatactagcactttgggaggccaaggcaggcagatcacc--aggtcaggagatcgagaccatcctggctaacatggtaaaaccccatctttactaaaaat-------aaaaaataaaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggtgtgaacctgggaggcagagcttgcagtgagctgagatcgcgtcactgcactcaagcctggagaa---c-agagcgagactccgtctc-aaaaaaaaaaaagaataaaaGGTTagccgggtgtg---gtggttcacgtct
- i hg18.chr22 C 0 I 62
- s rheMac2.chr10 61914209 344 + 94855758 AATAAAAGGTTa-gccgggagtggtggctcacgtctgtaatcccagcactttgggaggccgatgcgggctgatcacctgaggtccagagttccagaccaccctgaccaacatggcaaaaccccgtctctactaaaaat---------------acaaaaattagccaggcatagtggtgggcgcctgtgatcccaattactcaggaggctgaggcaggagcaccacttgaacccgggagtcggaggttgcagtaagccaagatcgtgacattgcactccagtctgggtga---caagagcaaaactccatctc-aagaaaaaaaaaatc-agaagataaaaaGGTTATAAATGAggccaatgttc
- i rheMac2.chr10 C 0 I 104
- s calJac1.Contig13114 14643 311 + 38599 AACAGAAGTAGAggctgggcgtggttgctcatgcctgtaatcccagcactttaggacgccaaggcgggtggatcacg--aggtcaacagatcgagaccatcctggtcaacaaggtgaaatcccgtctctattaaaaat---------------acaaaaattagctgggcatggtggtgcgcacctgtagtcccagctactccggaggctgaggcaggagaattgcttgaacccaggcaatggaggttgcggtgagctgagatcgtgccattgcactccagtctgggtaa---caacagcaaaactccatctc-aaaaaataaataaat-aaa--------------------------------
- i calJac1.Contig13114 I 146 C 0
- a score=118217.0
- s ponAbe2.chr22 13834301 212 + 46535552 agcctgaccaacatggcaaaacgccatctctactaaaaatacaaaaattagccaggcatggtggtgggcgcctgtaatcccaattactcgggaggctgaggc--aggagaatcacttgaacccgggagtcagaggttgcagtgagctaagatcgtgacattgcactccagcatgggtaacggagtgagaccctgtccccaaaaaaagaaaaaaa
- s hg18.chr22 16115000 212 + 49691432 agcctgaccaacgtggcaaaacgccatctctactaaaaatacaaaaattagccaggcatggtggtgggcgcctgtaatcccaattacttgggaggctgaggc--aggagaatcgcttgaacctgggagtcggaggttgcagtgagctaagatcgtgacattgcactccagcatgggtaacggagtgagaccctgttccaaaaaaaaccaaaaaa
- i hg18.chr22 I 62 I 1078
- s panTro2.chr22 16131432 212 + 50165558 agcctgaccaacgtggcaaaatgccatctctactaaaaatacaaaaattagccaggcatggtggtgggcgcctgtaatcccaattacttgggaggctgaggc--aggagaatcgcttgaacctgggagtcggaggttgcagtgagctaagatcgtgacattgcaccccagcatgggtaacggagtgagaccctgttccaaaaaaaaccaaaaaa
- i panTro2.chr22 I 62 I 1073
- s rheMac2.chr10 61914657 213 + 94855758 aggctgggcaacatagtgagaccccatctctacaaaaaata-aaaaattagctgggtttggtgacacacacctgttgtctcagttacttgggaggctgaagtcaaggggaatcccttgaggccaggatgtcaagcctgctgtgagctatgattatgccattgcactccagcatgggtaacgcagtgagaccctgtccaaaaaaaaatgacaaaa
- i rheMac2.chr10 I 104 I 1422
- s calJac1.Contig13114 14954 170 + 38599 -------------taataaaa----------aTtaaaaaa--caaaatcagccaggcatggtagcacatgcctgtagtcccagctacttgggaggctgaggc--agaagaattgcttgaacc-aggaggcggaggttgcagtgagctgagatcacgccactgcagtccagcctgggcgacacagcaagattccatctc----------------
- i calJac1.Contig13114 C 0 I 21
- a score=17854.0
- s ponAbe2.chr22 13836439 22 + 46535552 GAGGTAGAAGGTGGAGGAGCCA
- s hg18.chr22 16117191 22 + 49691432 GAGGTAGAAGGTGCAGGAGCCA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16133621 22 + 50165558 GAGGTAGAAGGTGGAGGAGCCA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61917499 22 + 94855758 GAGGTACAAGGTGGAGGAACCA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 15145 22 + 38599 GAGGTGGAAGGTGGAAGAGCCA
- i calJac1.Contig13114 I 21 C 0
- a score=39778.0
- s ponAbe2.chr22 13836630 56 + 46535552 CCATTAACCCCATAGAAATCTGAACAGGAAATGCTCAAGAAGATGGTATGCTTGGA
- s rheMac2.chr10 61917518 52 + 94855758 CCATTAATCCCACAGAAATCTGAACAGGAAATGCTCAAGAAGATGGTATGCT----
- i rheMac2.chr10 N 0 I 3
- s panTro2.chr22 16133640 52 + 50165558 CCATTAATCCCATAGAAATCTGAACAGGAAATGCTCAAGAAGATGGTATGCT----
- i panTro2.chr22 N 0 I 3
- s hg18.chr22 16117210 52 + 49691432 CCATTAATCCCATAGAAATCTGAACCGGAAATGCTCAAGAAGATGGTATGCT----
- i hg18.chr22 N 0 I 3
- s calJac1.Contig13114 15167 51 + 38599 ----TAATCCCATGGAAAACTGCACAGGAAATGCTCAAGAAGATGGTATGCT-GGC
- i calJac1.Contig13114 C 0 C 0
- a score=69882.0
- s ponAbe2.chr22 13836686 82 + 46535552 GCTTCTGCCCTTTGGAACCCCTGACCTGCAAGAGGCAACTCCCAGAGCTTCCCTAAGATAAAAGTTTTAACTGGTGCCTCAG
- s hg18.chr22 16117265 82 + 49691432 GCTTCTGCCCTTTGGAACCCCTGACCTGCAAGAGGCAACTCCCAGAGCTTCCCTAAGATAAAAGTTTTAACTGGTGCCTCAG
- i hg18.chr22 I 3 C 0
- s panTro2.chr22 16133695 82 + 50165558 GCTTCTGCCCTTTGGAACCCCTGACCTGCAAGAGGCAACTCCCAGAGCTTCCCTAAGATAAAAGTTTTAACTGGTGCCTCAG
- i panTro2.chr22 I 3 C 0
- s rheMac2.chr10 61917573 80 + 94855758 GCCTCTGCCCTTTGCAACCCCTGACCTGCAAGAGGCAACTCCCAGAGCTTCCCTAAGAT--AAGTTTTAACTGGTGGCTCAG
- i rheMac2.chr10 I 3 C 0
- s calJac1.Contig13114 15218 82 + 38599 GCTTCCGCCCTTCGGAACCCCTGACCTGCAAGAGGCAATTCCCAGAGCTTCCCCAAGATGAAGGTTTTAACGGGTGCCTCAG
- i calJac1.Contig13114 C 0 I 45
- a score=265723.0
- s ponAbe2.chr22 13837113 298 + 46535552 acaggctacaggtgtgagcca--ACACCCCACCTAAGGGGTGATTTTATTGGGTTATCCTGTCTCTGGAGAAGGAAACGGGCTACAGTCAATGAAATTAGCattctaaaagcaagagaatctgtaaagtagaaaaggaccttgagatgggtgcatgcgttttacacaggaaggcccagacttggcccagtctggcccaagaccacctaacttgtcagtagcaaagctgggatgaataaaagctcagcttcctgactccctgtccccagttctttccaccactccagccggccactcCCAA
- s rheMac2.chr10 61917998 298 + 94855758 acaggctaca-gcgtgagccaacacatccCACCT-AGGGGAGATTTTATTGGGTTACCTAGTCCCTGGAGAAGGAAATGGGCTATAGTCAATGAAATTAGCattctaaaagcaagagaatctgtaaagtagaaaaggaccttgagatgggagcctgcggtttacacgggaaggcccagacttggtccagtctggcccaagaccacctaacttgtcagtagcaaagctgggatgaataaaagctcagcttcctgactccctgtccccagttctttccaccactccagtcagcggctccCAA
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16134130 300 + 50165558 acaggctacaggtgtgagccaacacacccCACCTAAGGGGCGATTTTATTGGGTTATCCTGTCTCTGGAGAAGGAAAGGGGCCACAGTCAATGAAATTAGCattctaaaagcaagagaatctgtaaagtagaaaaggaccttgagatgggagcatgcgttttacacaggaaggcccagacttggcccagtctggcccaagaccacctaacttgtcagtagcaaagctgggatgaataaaagctcagcttcctgactccctgtccccagttctttccaccactccagccggccactcCCAA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16117704 300 + 49691432 acaggctacaggtgtgagccaacacacccCACCTAAGGGGCGATTTTATTGGGTTATCCTGTCTCTGGAGAAGGAAACAGGCCACAGTCAATGAAATTAGCATTCTAAAAGCAAGAGAATCTGTAAAGTAGAAAAGGACCTTGAGATGGGAGCATGCGTTTTACACAGGAAGGCCCAGATTTGGCCCAGTCTGCcccaagaccacctaacttgtcagtagcaaagctgggatgaataaaagctcagcttcctgactccctgtccccagttctttccaccactccagctgGCCACTCCCAA
- i hg18.chr22 C 0 C 0
- s calJac1.Contig13114 15345 277 + 38599 -----------GTGTGA-CTA----ACCACCACTAAGGGGTGATTTTATTGAGTTACCTTGTCTCTGGAGAAGGAAATGGGCT--AGTCAAAGAAATTAGCATTCTAAAGGCACGAGAATCTGTAAAGT-----AGGGCCTTGAGATGAGAGCCTGcattttacacaggaaggcccagacttggcccagtctggcccaagaccacctaactcgtcagtggcagagctgggatgaacaaaagctcagcttcctggctccccatcccctgctctttccaccactccaGTCGGCCGCTCCCAA
- i calJac1.Contig13114 I 45 C 0
- a score=98859.0
- s ponAbe2.chr22 13837411 134 + 46535552 TCCCTCTGCTAAGCCAACCCACCTACAGACAGTGTCACTGTCCCTCATTCCCCGAATCCCTTACTCAATCCCCCACAGCC-TTTCCATTTTTCCTGCCTTCCTAGCGCTATAGGGTTGGCTGGGCAGAGTGCTCA
- s hg18.chr22 16118004 130 + 49691432 TCCCCCTGCTAAGCCAACCCACCT----ACAGTGTCACTGTCCCTCATT-CCCAAATCCCTTACTCAATCCCCCACAGCCTTTTCCATCCTTCCTGCCTTCCTAGCGCTATAGGGTTGGCGGGGCAGAGTGCTCA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16134430 134 + 50165558 TCCCCCTGCTAAGCCAACCCACCTACAGACAGTGTCACGGTCCCTCATT-CCCGAATCCCTTACTCAATCCCCCACAGCCTTTTCCATCTTTCATGCCTTCCTAGCGCTATAGGGTTGGCGGGGCAGAGTGCTCA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61918296 135 + 94855758 TCCCTCTGCTAAGCCGACCCACCTACAGACAGTGTCGCTGTCCCTCATTCCCTGAATCTCTTACTCAATCCCCTACAGCCTTTTCCATCTTTCCTGCCTCCCTAGCGCTATAGCGTTGGCAGGGCAGAGTGCTCA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 15622 135 + 38599 TCCCTCTGCTAAGCCAACATACCTACAGACAGTGTCACGATCCCCCATTCCCTGAATCCCTCACTCAGTCCCGGACAGCTGTTTCCATCTTTCCTGAATCTCCAGCGTCACCGGGTTGGTGGGGCAGAGTGCTCA
- i calJac1.Contig13114 C 0 C 0
- a score=72847.0
- s ponAbe2.chr22 13837545 89 + 46535552 GAGACCAGCAAGCTGGGATGTGGGGTCTTCCCAAGGTGGTGCAGGATGTTTTGGCTGCTTAGAGGAGGAGCAGGGCAGGCATCTGCAAA
- s calJac1.Contig13114 15757 85 + 38599 GAGAGCAG-AAGCTGGGATGTGGGGTCTTCCCAAGGTGGTGCGGGGTTTCTTTGCTGTTTA---AAAAAGCAGGGCAGGCATCTGCAAA
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61918431 89 + 94855758 GAGACCAGCAAGCTGGGATGTGGGGTCTTCCTGAGGTGGTGCAGGATTTTTTGGCTGCTTAGAGGAGGAGCAGGGCAGGCATCTGCAAA
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16134564 89 + 50165558 GAGACCAGCAAGCTGGGATGTGGGGTCTTCCCGAGGTGGTGCGGGATATTTTGGCTGCTTAGAGGAGGAGCAGGGCAGGCATCTGCAAA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16118134 89 + 49691432 GAGACCAGCAAGCTGGGATGTGGGGTCTTCCCGAGGTGGTGCAGGATGTTTTGGCTGCTTAGAGGAGGAGCAGGGCAGGCATCTGCAAA
- i hg18.chr22 C 0 C 0
- a score=977545.0
- s ponAbe2.chr22 13837634 919 + 46535552 AGGCATCTGCATTTCTTACACAGTCCCTAACTGCCAGGCCCAGTGCCAGATCGCAGACCCTTTGTCAACAGAGATGCCCTGGCTTTGTAAGCCAAGAGGGAGGCAGAAAAGATCCTCTAGCAACACAGACTGGCCTCTGGGGGGAGGCGGAAGAGGGAATTGTCTACGAAAGTTCTCATTTAAACAAACAAACAACAAGATGAAAATAATAAGCTAGACAAAGAGCCAAGGGGGAACAGCAAGCAAACTCCTGAAATTGCACTGTAATTAAAGCATAGCTGCCTTCCAGATTCTCAAGTGCTGGGATGGGCTGGAGGG-----ATGTTTACTAACCTGGTCAAAAGACATCAGGGCAAATTAAGCTGCATCCCAGTCTTGCCTCCAAACACTTTAGCATGCAAATGAGACATGCCAAATTTGCATCTGGGGCATGAAGGGGACCAATAAGTAACCTGCACAGGTCTTGGGCGTTTGGTGAGAAGAATCCAAACTGGCCACCGTGAAGGGAGGCACTGGGGAATGCTGAGCAGGGGGTGGGGTGGTTATCCTGTTTCACCAGAGACGA---TTTTTTTTTGGTTTGGTCCAGGCCGATCTCGAGGCTAGGAGCTAGCTGACTAGCCCTCCAGGACCTTGCCAATTCACATATGAGAGTACACCAGACTTAGGCCCAGGAAGATTTACATGAGTTTGTGCCAGTATTAACCCCCGGAGATGCCTACCCAATCACAGCCATTGCGCCAAGGCAAGGAAGGCGTTGCCAGGGCGTTTGCATGACAGAAACTAGCATATGGGCTCAAGAGAAACCTTTCTGGGCAGAGGGAGGGAGGGCCATACCCACATGAATCACTCTCTGGTGGTTTTGCTTTGGTTTCAGAACCTGTGGCTAAGGCAGAAGGACCAGTAGGGCCCCTGGCCTCGTTGA
- s calJac1.Contig13114 15842 905 + 38599 AGGCAGCTGCATTTCTTACACAGTTCCTAACCGCCAGGCCCAGTGCCAGACAGCAGACCCTTTGTCAACAGAGATACCCTGGCTTTGTAAACCAAGAGGGAGGCAGAAAAAGTCCTCTAGCAACACAGACTGGCCTCT-GGGGGAGGCGGGAGAGGGAACTGTCTACCGAAGTTCTCATTTAAACAAACAAACAAGAAGACAAA---AATAAGCTAGACAAAGAGCCAAGGGGGAACAGGAAGCAA--CTCTGAAATTACACTGTAATTGAAGCAGAGCTGCTTTCCAGATTCCCAAGTGCTGGGACAGGCTTGGGGC-----ACGTTTATCAACCTGGTCAAAAG----CAGGACAAATTAAGCTGCATCCCAGCCTTGCCTCTGAAGAATTTAGCATGCAAATGAAACATGCTAAGCTTGCATCTGGGGCATGAAGCGGACCAGTAAGTAACCTGCACACGTCTTGGGCGTTTAGAGAGAAGAATCGAAACTGGGCACTG-AAAGGGAGGCACTAGGGAA-GCTGAGCAGGGGGT-GGGTGGCCATCCTGCTTCACCAGGGACGG----TTTTCTTTGGTTTCGTCCAGGCCGATACCGAGGCTAGAAGCTAGCTGGCTGGCCCTCCAGGACCACGCCAGTTCACATATGAGAGTACACCAGACTTAGGCGCAGGAAGACTTACGTGAGTTTGTGCCAGTATTAACCCCGAGGGATGCCTACCCAATCAGAGCCATTGCGCCAAGGCAAGGAGGGCACTGCCAGGGCGTTTGCATGACAGAAACTAGCATATGGGCTCAAGAGAAACCTTTCTGGGCAGGGGAAGGGAGGGCCATACCCACAAGAATCACTCTCTGGTGGTTTCACTTTGGTTTCAGAACCTGTGGCTAAGGCAGAACGACCAGGAGGGCCCCTGGCCCCGTTGC
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61918520 904 + 94855758 AGGCATCTGCATTTCTTACACAGTCCCTAACCGCCAGGCCCAGTGCCAGATCGCAGACCCTTTGTCAACAGAGATGCCCTGGCTTTGTAAACCAAGAGGGAGGCAGAAAAAGTCCTCTAGCAACACAGACTGGCCTCT-GGGGCAGGCGGGAGAGGGAATTGTCTGTGAAAGTTCTCATTTAAACAAACAAACAACAAGATGAAAATAATAAGCTAGACAAAGAGCCAAGGGGGAACAGCAAGCAAACTCCTGAAATGGCACTGTAATTAAA---------------------TAAAGTGCTGGGATGGGCTGGGGGGGAGATGGGTTTATTAACCTGGTCAAAAGACATCAGGGCAAATTAAGCTACATCCCAGCCTTGCCTCCAAACAATTTAGCATGCAAATGAGACATGCTAAATTTGCATCTGGGGCATGAAGGGGACCAATAAGTAACCTGCACAAGTCTTGGGCGTTTGGAGAGAAGAATCCAAACTGGCCACCGCGAAGCGAGGCACTGGGGAACGCAGAGCAGGGGGTGGGGTTGCTATCCTGTTTCACCAGAGACGATTTTTTTTTTTTGGTTTGGTCCAGGCTGATCTCGAGGCTAGGAGCTAGCTGACTGGCCCTCCAGGACCATGCCAGTTCACATATGAGAGTACACCAGACTTAGGCCCAGGAAGATTTACATGAGTTTGTGCCAGTATTAACCCCGGGAGATGCCTACCCAATCAGAGCCACTGCGCCAAGGCAAGGAGGGCATTGCCAGGGCGTTTGCATGACAGAAACTAGCATATGGGCTCAAGAGAAACCTTTCTGGGT-GGGGGAGGGAGGGCCATACCCACATGAATCACTCTCTGGTGGTTTTGCTTTGGTTTCAGAACCTGTGGCTAAGGCAGAAGGACCAGGAGGGCCCCTGGCCGCGTTGC
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16134653 919 + 50165558 AGGCATCTGCATTTCTTACACAGTCCCTAACTGCCAGGCCCAGTGCCAGATCGCAGACCCTTTGTTAACAGAGATGCCCTGGCTTTGTAAACCAAGAGGGAGGCAGAAAAAGTCCTCTAGCAACACAGACTGGCCTCT-GGGGGAGGCGGGAGAGGGAATTGTCTACGAAAGTTCTCATTTAAACAAACAAACAACAAGATGAAAATAATAAGCTAGACAAAGAGCCAAGGGGGAACAGCAAGCAAACTCCTGAAATTGCACTGTAATTAAAGCATAGCTGCCTTCCAGATTCTCAAGTGCTGAGATGGGCTGGAGGG-----ATGTTTACTAACCTGGTCAAAAGACATCAGGGCAAATTAAGCTGCATCCCAGCCTTGCCTCCAAACACTTTAGAATGCAAATGAGAGATGCCAAATTTGCATCTGGGGCATGAAGGGGACCAATAAGTAACCTGCACAGGTCTTGAGCGTTTGGTGAGAAGAATCCAAACTGGCCACTGTGAAGGGAGGCACTGGGGAATGCTGAGCAGGGGGTGGGGTGGCTATCCTGTTTCACCAGAGATGA--TTTTTTTTTTGGTTTGGTCCAGGCCGATCTCGAGGCTAGGAGCTAGCTGACTAGCCCTCCGGGACCATGCCAATTCACATATGAGAGTACACCAGACTTAGACCCAGGAAGATTTACATGAGTTTGTGCCAGTATTAACCCCCGGAGATGCCTACCCAATCAGAGCCATTGCGCCAAGGCAAGGAAGGCATTGCCAGGGCGTTTGCATGACAGAAACTAGCATATGGGCTCAAGAGAAACCTTTCTGGGCAGGGGGAGGGAGGGCCATACCCACATGAATCACTCTCTGGTGGTTTTGCTTTGGTTTCAGAACCTGTGGCTAAGGCAGAAGGACCAGTAGGGCCCCTGGCCGCGTTGA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16118223 918 + 49691432 AGGCATCTGCATTTCTTACACACTCCCTAACTGCCAGGCCCAGTGCCAGATCGCAGACCCTTTGTCAACAGAGATGCCCTGGCTTTGTAAACCAAGAGGGAGGCAGAAAAAGTCCTCTAGCAACACAGACTGGCCTCT-GGGGGAGGCGGGAGAGGGAATTGTCTACGAAAGTTCTCATTTAAACAAACAAACAACAAGATGAAAATAATAAGCTAGGCAAAGAGCCAAGGGGGAACAGCAAGCAAACTCCTGAAATTGCACTGTAATTAAAGCATAGCTGCCTTCCAGATTCTCAAGTGCTGAGATGGGCTGGAGGG-----ATGTTTACTAACCTGGTCAAAAGACATCAGGGCAAATTAAGCT-CATCCCAGCCTTGCCTCCAAACACTTTAGAATGCAAATGAGACATGCCAAATTTGCATCTGGGGCATGAAGGGGACCAATAAGTAACCTGTACAGGTCTTGAGCGTTTGGTGAGAAGAATCCAAACTGGCCACTGTGAAGGGAGGCACTGGGGAATGCTGAGCAGGGGGTGGGGTGGCTATCCTGTTTCACCAGAGATGA--TTTTTTTTTTGGTTTGGTCCAGGCCGATCTCGAGGCTAGGAGCTAGCTGACTAGCCCTCCAGGACCATGCCAATTCACATATGAGAGTACACCAGACTTAGGCCCAGGAAGATTTACATGAGTTTGTGCCAGTATTAACCCCCGGAGATGCCTACCCAATCAGAGCCATTGCGCCAAGGCAAGGAAGGCATTGCCAGGGCGTTTGCATGACAGAAACTAGCATATGGGCTCAAGAGAAACCTTTCTGGGCAGGGGGAGGGAGGGCCATACCCACATGAATCACTCTCTGGTGGTTTTGCTTTGGTTTCAGAACCTGTGGCTAAGGCAGAAGGACCAGTAGGGCCCCTGGCCGCGTTGA
- i hg18.chr22 C 0 C 0
- a score=367902.0
- s ponAbe2.chr22 13838553 221 + 46535552 TTTTTCTCCTCCCAGCTGCTTCTGTCTCTCTCTCAGGCTCCTGGAAACAAAACAGCTGAGCAGATAAACAAGTCACCACCTGCTCCCTCCTCTCCCGTGACACCGCCCC-GTCCCCAAGTCCCACCCCTTCTTCTTGCACTCTCTCCCTCCATTCCTCCCTGAAGCCAAACTT-CCGGCAGCAGCTGCAGCTGCTCTCTCCCCTCCCGCGCCTGCCTC---------CCCAG
- s hg18.chr22 16119141 222 + 49691432 TTTTTCTCCTCCCAGCTGCTTCTGTCTCTCTCTCAGGCTCCTGGAAACAAAACAGCTGAGCAGATAAACAAGTCACCACCTGCACCCTCCTCCCCCGTGACACCGCCCCTGTCCCCAAGTCCCACCCCTTCTTCTTGCACTCTCTCCCTCCATTCCTCCCTGAAGCCAAACTT-CCGGCAGCAGCTGCAGCTGCTCTCTCCCCTCCCATGCCTGCCTC---------CCCAG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16135572 222 + 50165558 TTTTTCTCCTCCCAGCTGCTTCTGTCTCTCTCTCAGGCTCCTGGAAACAAAACAGCTGAGCAGATAAACAAGTCACCACCTGCTCCCTCCTCCCCCGTGACACCGCCCCTGTCCCCAAGTCCCACCCCTTCTTCTTGCACTCTCTCCCTCCATTCCTCCTTGAAGCCAAACTT-CCGGCGGCAGCTGCAGCTGCTCTCTCCCCTCCCATGCCTGCCTC---------CCCAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61919424 230 + 94855758 TTTTTCTCCTCCCAGCTGCTTCTGTCTCTCTCTCAGGCTCCTGGAAACAAAACAGCTGAGCAGATAAACAAGTCACCACCTGCTCCCTCCTCCCCCGTGACACCGCCCCTGTCCCCAAGTCCCACCCCTTCTTCTTGCACTCTCTCCCTCCATTCCTCCCTGAAGCCAAACTT-CCGGCAGCAGCTGCAGCTGCTCTC-CCCCTCCCGTGCCTGCCTCCCAGCACAGCCCAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 16747 219 + 38599 TTTTTCTCCTCCCAGCTGCTTCTGTCTCTCTCTCAGGCTCCTGGACACAAAACAGCTGAGCAGATAAACAAGTCACCACCTGCTCCCTCCTCCCCCGTGACACCGCCCCTGTCCCCAAGTCCCACCCCTTCTTCTTGCCCTCTCTCCCTCCATTCCTCCCTGAAGCCAAACTTCCCAGCAGCAGCTGCAGCTGCTCGCTCCCCTCCCGTG---GCCT----------CCCAG
- i calJac1.Contig13114 C 0 C 0
- a score=461482.0
- s ponAbe2.chr22 13838774 434 + 46535552 CACAGTCCCCTGCAGCAGCCCCTGCCTCACCAATGGCAAATGAGGAACATGTGTACAGAGCCCTGGGCTCTCCCTCCTCCTGAGGCCATTTCCAACAAAACACTTGTGCTTTCTGAAAGTTAGATGTGGAGCTCTGGAGTCCTCAAGGAAAACGGGTTTATGGCATCCGCCAGCCCTGGAGCCAGTGAGTGTCT-GGCCCCTTGGCCCAAAGCCCCACTGCCAGGCACAGGCAAACTGGGAGGAAGGGGTTAATCTGAGCAGAGGAGGCCAGGAGGGGCCCAGCTCCATTCCCGACTGCAGAGGACGCTCATCCCCGGGATGGAGGTCAGCGGGAAGCAGCTCAAAGAGGCCAGGAGGCCAAGGCCCAGTTTAAAACCTGAATGAAGGCCACCTTTTCAGTAGCATGCACGTGTGTG--TGCACACACATGTACACA
- s hg18.chr22 16119363 436 + 49691432 CACAGTCCCCTGCCGCAGCCCCTGCCCCACCAATGGCAAATGAGGAACATGTGTATAGAGCCCTGGGCTCTCCCTCCTCCTGAGGCCATTTCCAACAAAACACTTGTGCTTTCTGAAAGTAAGATGTGGAGCTCTGGAGTCCCCAAGGAAAACGGGTTTATGGCATCCGCCAGCCCTGGAGCCAGTGAGTGTCT-GGCCCCTTGGCCCAGAGCCCCACTGCCAGGCACAGGCAAACTGGGAGGAAGGGGTTAATCTGAGCAGAGGAGGCCAGGAGGGGCCCAGTTCCATTCCCGACTGCAGGGGATGCTCATCCCCGGGATGGAGGTCAGCAGGAAGCAGCTCAAAGAGGCCAGGAGGCCAAGGCCCAGTTTAAACACTGAATGAAGGCCACCTTTTCAGTAGCATGCACATGTGTGCATGCACACACACGTACACA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16135794 436 + 50165558 CACAGTCCCCTGCCGCAGCCCCTGCCCCACCAATGGCAAATGAGGAACATGTGTACAGAGCCCTGGGCTCTCCCTCCTCCTGAGGCCATTTCCAACAAAACACTTGTGCTTTCTGAAAGTAAGATGTGGAGCTCTGGAGTCCCCAAGGAAAACGGGTTTATGGCATCCGCCAGCCCTGGAGCCAGTGAGTGTCT-GGCCCCTTGGCCCAGAGCCCCACTGCCAGGCACAGGCAAACTGAGAGGAAGGGGTTAATCTGAGCAGAGGAGGCCAGGAGGGGCCCAGCTCCATTCCCGACTGCAGGGGATGCTCATCCCCGGGATAGAGGTCAACAGGAAGCAGCTCAAAGAGGCCAGGAGGCCAAGGCCCAGTTTAAACCCTGAATGAAGGCCACCTTTTCAGTAGCATGCACATGTGTGCATGCACACACACGTACACA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61919654 435 + 94855758 CACAGTCCCCTGCAGCAGCCCCTGCCCCACCAATGGCAAATGAGGAACATGTGTACAGAGCCCTGGGCTCTCCCTCCTCCTGAGGCCATTGCCAACAAAACACTTGTGCTTTCTGAAAGTAAGATGTGGAGCTCTGGAGTCCCCAAGGAAAACGGGTTTATGGCATCCGCCAGCCGTGGAGCCAGTGAGTGTCT-GGCCCCTTGGCCCAGAGCCCCACTGCCAGGCACAGGCAAACGGGGAGGAAGGGGTTAATCTGAGCAGAGGAGGCC-GGGGGGGCCCAGCTCCATTCCCGACTGCAGGGGACGGTCATCCCCGGGATGGAGGTCAGCAGGAAGCAGCTCAGAGAGGCCAGGAGGCCAAGGCCCAGTTTAAACCCTGAATGAAGGCCACCTTTTCAGTAGCATGCACACGTGTGCGTGCACACACAGATACACA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 16966 427 + 38599 CACAGTTCCCTGCAGCAGCTCCTGCCTCACCAATGGCAAATGAGGAACATGTGTACAGAGCCCTGGGCTCTCTGTCCTCCCAGGGCCATTTCAAACAAAACACTTGTGCTTTCTGAAAGTAAGATATGGAGCTCTGGAGTCCCCAAGGAAAAGGGGTTTATGGCGTCCA-CAGCCCTGGAGCCAACGAGTGTCTGGGCCCCTTGGCCAAGAGCCCCACTGCCAGGCACAGGCAAACTGGGGGGAAGGGGTTAATCTGAGCAGAAGACGCCAGGAGGGGCCCAGCTTCATTCCCGATTGCAGGGGAGGCTCCTCCTT-GGATGGAGGTCAGCAGGAAGCTGCTCAGAGAGGCCAGGAGGCCAAGGCCCAGTTTAAACCCTGAATGAAGGCCACCTTTTCAGTAGCATGCACGTGTGTGCGTGCACACACA--------
- i calJac1.Contig13114 C 0 C 0
- a score=156252.0
- s ponAbe2.chr22 13839208 144 + 46535552 CTCATACACACACGTTACCATGCACATGGTATCCTCTTATTAACAACATTAAGGTTGTCACGACAGACTCTGGGTTTGGTGTCAGAAGCCTTGCATCAGCGCTGTTTAATAAGTCCCCAGTGCCAATGGTAGGCACTATGGAGG
- s hg18.chr22 16119799 144 + 49691432 CTCATACACACATGTTACCATGCACATAGTATCCTCTTATTAACAACGTTAAGGTTGTCACGACAGACTCTGGGTTTGGTGTCGGAAGCCCTGCATCAGGGCTGTTTAATAAGTCCCCAGCGCCAATGGTAGGCACTATGGAGG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16136230 144 + 50165558 CTCATACACACATGTTACCATGCACATAGTATCCTCTTATTAACAACGTTAAGGTTGTCACGACAGACTCTGGGTTTGGTGTCGGAAGCCCTGCATCAGGGCTGTTTAATAAGTCCCCAGTGCCAATGGTAGGCACTATGGAGG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61920089 144 + 94855758 CTCGTACACACACGTTACCATGCACATGGTATCCTCTTATTAACAACGCTAAGGTTGCCACAACAGACTCTGGGTTTGGTGTCAGAAGCCCTGCATCAGCGCTGTTTAATAAGTCCCCAGTGTCCATGGTAGGCACTATGGAGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 17393 141 + 38599 --CGTACACACGTGTTAGCATGCACATGGCGTCCTCTAATTAACAACAGAACAGTTGTCACAACAGACTCTGGGTTTGGTGTCAGAAGCCCTG-ATCCGTGCTGCTTAATAAGTCCCCAGTGCCAGAGGCAGGCACTATGGAGG
- i calJac1.Contig13114 C 0 C 0
- a score=144221.0
- s ponAbe2.chr22 13839352 181 + 46535552 CCCAAACTGTTGGGGAGGGGAACGTCAGAGTGCCTCCTCCTAGGGAGGGATGTGTGTGCCAGGAGCTGGGTGATGGAGCTCCCCCAGAGGTTTTCTTGCCAGTTTAGAGTTTAACTCTGGGTTAGTAGGGCTCACCTTAGTTCTGAGGCATGTAGGTGAAGACACTACAATTAGGAAGGTG
- s hg18.chr22 16119943 181 + 49691432 CCCAAACTGTTGGGGAGGGGAACCTCAGAGTGCCTTCTCCCAGGGAGGGGTGTGTGTGCCAGGAGCTGGGTGATGGAGCTCCTCCAGAGCTTTTCTTGGAAGTTCAGAGTTTAACTCTGGGTTAGTAGGGCTCACCTTAGTTCTGAGGCATGTAGGTGAAGACACTGCAATTAGGAAGGTG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16136374 181 + 50165558 CCCAAACTGTTGGGGAGGGGAACCTCAGAATGCCTTCTCCCAGGGAGGGGTGTGTGTGCCAGGAGCTGGGTGATGGAGCTCCTCCAGAGCTTTTCTTGGAAGTTCAGAGTTTAACTCTGGGTTAGTAGGGCTCACCTTAGTTCTGAGGCATGTAGGTGAAGACACTGCAATTAGGAAGGTG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61920233 181 + 94855758 CCCAAACTGTTGGGGAGGGGAACCGCAGAGTGCCTCCTCCCAGGGAGGGGTGTGTGTGCCAGGAGCTGGGTGGTGGAGCTCCCCCAGAGGTTTTCTTGGCAGTTTAGAGTTTAGCTCTGGGTTAGTAGGGCTCACCTTAGTTCTGAGGCATGTAAGTAAAGACACTGCAGTTAGGAAGGGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 17534 181 + 38599 CCCCAGCTGGTGGGGAAGGGAAGCCCAGAGTGCCTCCTCCCAGCGAGGGGTGTGCGTGCCAGGAGCTGGATGGTGCAGCTCCCCCAGAGGTTTTCTTGGCAGTTTAGGGTTTAACTTTGGGTTACTAGGGCTCACCTTGGTTCAGAGGCACCTAAGTGAAGACACTGCAGCTAGGATGGTG
- i calJac1.Contig13114 C 0 C 0
- a score=34073.0
- s ponAbe2.chr22 13839533 42 + 46535552 ATGGGGCAGGGGACCAGCCTGTCTTCACTCCCAAGCTTATGt
- s hg18.chr22 16120124 42 + 49691432 ATGGGGCAGGGGACTAGCCTGTCTTCACCCCCAGGCTTATGt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16136555 42 + 50165558 ATGGGGCAGGGGACCAGCCTGTCTTCACCCCCAAGCTTATGT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61920414 42 + 94855758 ATGGGGCAGGAGACCAGCCTGTCTTCACCCCCAAGCTTCCGT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 17715 42 + 38599 ATGAGGCAGGGGGCCAGCCTGTCTTCACCCCCAAGCTTCCAT
- i calJac1.Contig13114 C 0 C 0
- a score=12749.0
- s ponAbe2.chr22 13839718 27 + 46535552 cttcttctttctttttttttttttttt
- s panTro2.chr22 16136660 22 + 50165558 cttcttctttc-----ttttttttttt
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16120232 22 + 49691432 cttcttctttc-----ttttttttttt
- i hg18.chr22 C 0 C 0
- s calJac1.Contig13114 17757 27 + 38599 Attctttttttcttttttttttttttt
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61920473 16 + 94855758 -----------tttttttttttttttt
- i rheMac2.chr10 C 0 C 0
- a score=43331.0
- s ponAbe2.chr22 13839745 56 + 46535552 tgagatggagtctagctctgtcacccaggctggagtgcaatggtgcaatcttagct
- s panTro2.chr22 16136682 56 + 50165558 tgagatggaggctagctctgtcacccaggctggagtgcaatggtgcgatctcagct
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16120254 56 + 49691432 tgagatggagtctagctctgtcacccaggctggagtgcaatggtgcgatctcagcc
- i hg18.chr22 C 0 C 0
- s calJac1.Contig13114 17784 55 + 38599 tgagatggagtctctctctgtcgcccaggttggagtgcagtggtacgacct-agtt
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61920489 56 + 94855758 tgagatggagtctagctctgtcacccaggctggagtgcagtgttacgatctcagct
- i rheMac2.chr10 C 0 M 724
- a score=281868.0
- s ponAbe2.chr22 13840978 353 + 46535552 agagtctcactctgtctcccaggctggagtgcagtggtgtgaccttgcctcactgcagccttgaactcctgggctcaaggaatcctcctgcttcagcctcctgagtctataggtgcacaccaccacacccagctaatttttaagtgctttgtagagac-agggtctccctatgttgcccaagctggtctcaaactcctggcctgaagcgatcctcttgccttggcctccctaagtgctgagattacagttgtgagccaccatgcccagACCACATTTCCCCAGAACTC-TATCTTTCCTGCTTGTGGACGAGGCAGGGGATGGATTTGGTGTCTGAGAAAGAAAAACAC-ACCTTT
- s hg18.chr22 16120905 354 + 49691432 agagtctcgctctgtctcccaggctggagtgcagtggggtgacctttcctcactgcagcattgaactcctgggctcaaggaatcctcccgctttagcctcctgagtctataggtgcacaccaccacacccagctaatttttaagtgttttgtagagac-agggtctccctatgttgcccaagctggtctcaaactcctggcctgaagcgatcctcctgacttggcctctcaaagtgctgagattacagttgtgagccaccatgcccagACCACATTTCCCCAGAACTC-TATCTTTCCTGCTTGTGGACAAGGCAGGGGATGGATTTGGCGTCTGAGAAAGACAAACACAACCTTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16137694 354 + 50165558 agagtctcgctctgtctcccaggctggagtgcagtggggtgaccttgcctcactgcagcattgaactcctgggctcaaggaatcctcccgcttcagcctcctgagtctataggtgcacaccaccacacccagctaatttttaagtgttttgtagagac-agggtctccctatgttgcccaagctggtctcaaactcctggcctgaagcgatcctcctgccttggcctctcaaagtgctgagattacagttgtgagccaccatgcccagATCACATTTCCCCAGAACTC-TATCTTTCCTGCTTGTGGACAAGGCAGGGGATGGATTTGGTGTCTGAGAAAGACAAACACAACCTTT
- i panTro2.chr22 C 0 C 0
- s calJac1.Contig13114 18256 350 + 38599 agaggctttctctgtc--ccaggctggagtgcagtggtgtgatcttgcctcactgcagccttgaacttctgggctcaagaaatcctcctgcttcagcctcctgggtctataggtacacac--ccacacgcggctaatttttaaatgctttgtaacgac-agggtctccctatgttgcccaagctggtctcaaactcccggcctcaagcggttttcctgcgttggcctccccaagtgctgacactacagttgtgtaccaccatgcccagccCACATTTCCCCAGAACTCATATCTTTCCTGCTGGTGGACAAGGCAGGGGATGGATCTGGTGTTTGGGAAACACAAACAC-ACCttt
- i calJac1.Contig13114 I 155 I 932
- s rheMac2.chr10 61921269 337 + 94855758 -----------------cccaggctggagtgcagttgtgtgaccttgcctcactgcagccttgaactcctgggctcaaggaatcctcccgcttcagcctcctgagtctataggtgcacaccaccacacccagctaatttttaagtgttttgtagagacgggggtcaccctatgttgcccaagctggtctcaaactcctggcctcaagcgatcctcctgccttggcctcccaaaatgctgagattacagttgtgagccacgacgcccagACCATATTTCCCCAGAACTC-TATCTTTCCTGCTTGTGGACAAGGCAGGGGATGGATTTGGTGTTTGAGAAAGACAAATAC-ACCTTT
- i rheMac2.chr10 M 724 C 0
- a score=119904.0
- s ponAbe2.chr22 13841331 195 + 46535552 AATTTGCTGACTGTCTCAT-ACCTGTCTGCACAGCCTGCCGCTGTTTCGTGTGGAAAGTAGCAG------TAACCTGGATAGCTCACA--GctgggtttgaaacagttaatggctgagtgaccttgagcaagttacttgacctcccggagcctgtcttctcattggtaaaatgttaacaatatctggctctgactCAGAGTTAA
- s panTro2.chr22 16138048 195 + 50165558 AATTTGCTGACTGTCTCAT-ACCTGTCTGCACAGCCTGCTGCTGTTTCGTGTGGAAAGTAACAG------TAGCCTGGATagctcaca--gctgggtttgaaacagttaatggctgagtgaccttgaacaagttacttgacctcccggagcctgtcttctcattggtaaaatgttaacaatatctggctcTGACTCAGAGTTAA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16121259 195 + 49691432 AATTTGCTGACTGTCTCAT-ACCTGTCTGCACAGCCTGCTGCTGTTTCGTGTGGAAAGTAACAG------TAGCCTGGATAGCTCACA--GctgggtttgaaacagttaatggctgagtgaccttgaacaaattacttgacctccctgagcctgtcttctcattggtaaaatgttaacaatatctggctcTGACTCAGAGTTAA
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61921606 186 + 94855758 AATTTGCTGACTGTCTCAT-ACCTGTCTGCACAGCCCGCCACTGTTTTGTGTGGAAAGTAGcaggaacactggcctggatagctcaca--gctgggtttgaaacagttaatggctgagtgaccttgaacaagttacttgacctcccgggaccggtcttctcactggcaaaatgttaacaatgt-------taac--------aa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 19538 183 + 38599 -aactcctgac---ctcatgatccgcccacccaggcttccc-------------aaagtgctggga----ttacaggcatgagccaccgtgcctggcctgaaactgttgatggctgtgtgatcttgaacaagttacttgacctcccagagcctgttttcttattggttaaatgttagaaatatctggctctgactCAAAATTAA
- i calJac1.Contig13114 I 932 I 244
- a score=383075.0
- s ponAbe2.chr22 13841526 491 + 46535552 ATTACTCTTTTGTTTTTCAGGTGGAATTAAGTGACAAGGCAAAGCTAATGTAAGATACATAAAACACCAAAAACACCGAGCATTCTGCCGGGAACCCATTTGGTGCTCAATAAAATCATTGCCCTTTTTTTGGTGTTTTGTTGGAGACAAAACGGAAACACCAAATGGCTGGTGGAAGTAGCAGGAAAAAACGAGACCAAAAACCCAGTGGCTCTGAAGAGGTACCTGCAGACCCACTGGGCAGGGTAGAGAGGAGCCCAGTGGGAACTTTTCTGCCAGGAGGAATCAGTGGGCAGAGCTCTTCTTCCCACTTGTCCAGcagggcttctcatcctcggcaccgctgacatttgtgccagatatttctttgatttggaggctgtcctgtgcactgtcggatgt------ttagcagcatcctcagcctctactctccaggtgaagtagcaagttgtctgcct-cccgcagttatgaccatcagaatgtcCTG-GTGGAGG
- s panTro2.chr22 16138243 491 + 50165558 ATTACTCTTTTGTTTTTCAGGTGGAATTAAGTGACAAGGCAAAGCTAATGTAAGATACATAAAACACCAAAAACACCAAGCATTCTGCCGTGAACCCATTTGGTGCTCAATAAAATCATTGCCCTTTTTTTGGTGTTTTGTTGGAGACAAAACGGAAACACCAAATGGCTGGTGGAAGTGGTAGGAAAAAACGAGACCAAAAACCCAGTGGCTCTGAAGAGGTACCTGCAGACCCACTGGGCAGGGTAGAGAGGAGCCCAGTGGGAACTTTTCTGCCAGGAGGAATCAGTGGGCAGAGCTCTTCTTCTCATTTGTCCAGcagggcttctcatcctcagcactgctgacatttgcgccagatatttctttggtttggaggctgtcctgtgcactgtcggatgt------ttaccagcatcgtcagtctctactctccaggtgaagtagcaagttgtctgcct-cccgcagttatgacaatcagaatgtcCTG-GTGGAGG
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16121454 491 + 49691432 ATTACTCTTTTGTTTTTCAGGTGGAATTAAGTGACAAGGCAAAGCTAATGTAAGATACATAAAACACCAAAAACACCAAGCATTCTGCCGTGAACCCATTTGGTGCTCAATAAAATCATTGCCCTTTTTTTGGTGTTTTGTTGGAGACAAAACGGAAACACCAAATGGCTGGTGGAAGTGGTAGGAAAAAAGGAGACCAAAAACCCAGTGGCTCTGAAGAGGTACCTGCAGACCCACTGGGCAGGGTAGAGAGGAGCCCAGTGGGAACTTTTCTGCCAGGAGGAATCAGCGGGCAGAGCTCTTCTTCCCATTTGTCCAGcagggcttctcatcctcagcactgctgacatttgcgccagatatttctttgttttggaggctgtcctgtgcactgtcggatgt------ttagcagcatcgtcagcctctactctccaggtgaagtagcaagttgtctgcct-cccgcagttatgacaatcagaatgtcCTG-GTGGAGG
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61921792 490 + 94855758 actactcctttgtttttcaggtgaaattaagtgacaaggcaaagctaatgtaagatacataaaacaCCGAAAACGCTGAGCATTCTGCCGGGAACCCATTTGGTGCTCCATAAAATCATTGCCCTTGTTTTGGTATTTTGTTGGAGACGAAATGGAAACACCAAATGGCTGGTGGAAGTGACAGGAGAAAACAAGACCAAAAACCCAATGGCTCTGAAGAGGTACCTGCAGACCCACTGGGCAGGGTAGAGAGGAGCCCAGTGGGAACTTTTCTGCCAGGAGGAAACGGTGGGCAGAGCTCTTCTTCCCACTTGTCTAGcagggtttctcatcctcggcaccgctgaca-ttgcgccagatatttctttgctttggaggctgtcctgtgcactgtaggatgt------ttagcagaattcccagtgtctactctccagatggagtagcaagttgtctgcct-cccccagttacgacaatcagaatgtcccG-ATGGAGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 19965 485 + 38599 GTTCCTCTTCTGTTTTTCAGGTGAAATTAAGTGACAGG-----GCTAAGGTAAGATACATGAAACAGCAAC---------CATTCTGCTGGGACTCCATTTGGTGCTCAATAAAATCATTCGCCTTTTTTTGGTCTTTTGTTGCAGACGAAATGGAAACACCAAATGGCTGGTGGAAGTGGCACGAATAAACGAGACCAAAAACCCTGTGGCTCTGAGGAGTCACCTGCAGACCCACTGGGCAGGGCAGAAAGGCGTCCGGGGGGAAGTTTCCTGCCAGGAGGGATCAGTGGGCAGGTCTCTCCTTCCCACTTGTTCAGcagggtttctcctcctcggcaccactgacatttgggccaggtatttctttgatctggcggctgtcctgtgcactggagggggcagggggttagcaatgtccccagcctctactctccaggtgaagtggcaagctgtccgcctccccccagtgatgacaatcagaatgtcCTgcgtggtgg
- i calJac1.Contig13114 I 244 I 599
- a score=450047.0
- s ponAbe2.chr22 13842141 668 + 46535552 CCTTTCTCACAAACAAGAGATGCCT-----GAGA---AAGACCTGGTCATGTGGCAGGTGGTGAGTGGCTACTGGAAGAAATATGGTGGCTGGGGGAGAGGCAAGGGAGAAGCGGTGCCTGCAGTTGAGCAGGCTGGCTGGAGAGCCAAGGCCAGTGCCCACAAGTGACTCCCCCGAGGGGTGTTGCCTTGGTGGGCTTCCCCGCTCTGGCCTTTTTTCACCTTGTTTGCTGAATCCAGGTAAAATTTTTAACTAAATTGGAAAGCAATTCCGGGTAGTGAGAGTCAGATCTGTCGCTGCCCTTGctgttgctaatgagctgtatgaccttagttgagccatttgatctctctgcaactgtttcttgggctgtgaaacgtgggggttggagtctctgatttctaaggtccttttcagctgtaagttctaAGGCCTGTGAATACCACATTGTGATTAAGCCAGCTGGGTGGTGGTGAGGGCCTTGTAAGTTTCGGTCT-----CACTGCAAGCCTGCGATAGAATTCTCCACATGTCTTT-------------------------------------------------------------------------------------------GTT----------------------------------------------------------------AAGAACTCTT--ggccgggcacagtggctcatacctgtaatcccagcattttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaagatagtgaaaccctgtctctact-------aaaaatacg
- s panTro2.chr22 16138858 667 + 50165558 CCTTTCCCACAAACAAGAGATGCCT-----GAGA---AAGACCTGGTCATGCAGGAGGTGGTGAGTGGCTACTGGAAGAAATATGGTGGCTGGGGGAGGGGCAAGGGAGAAGC-CTGCCTGCGGTTGAGCAGGCTAGCTGGAGAGCCAAGGTCGGTGCCCACTAGTGACTCTCCCGAGGGGTGTTGCCTTGGTGGGCTTCCCCGCTCTGGCCTTTTGTCACCTTGTTTGCTGAATCCAggtaaaatgtttaaccaaattggaaagcaattccggggagttggagtcagatctgtccctgcccttgctgttgctaatgagctgtatgaccttagttgagccatttgatctctctgcaactgtttcttgggctgtgaaacatgggggttggagtctctgatttctaagatccttttcagctgtaagttctaAGGCCTGTGAATACCACAGTGTGATTAAGCCAACTGGGTGGTGGTGAGGGCCTTGTAAGTTTCAGTCT-----TACTGCAAGCCAGCGATAGAATTCTCCACATGTCTTT-------------------------------------------------------------------------------------------GTT----------------------------------------------------------------AAGAACTCTT--ggcccggcacagtggctcatgcctgtaatcccagcattttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaagatggtgaaaccccgtctctact-------aaaaataca
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16122069 667 + 49691432 CCTTTCCCACAAACAAGAGATGCCT-----GAGA---AAGACCTGGTCATGCAGGAGGTGGTGAGTGGCTACTGGAAGAAATATGGTGGCTGGGGGAGGGGCAAGGGAGAAGT-CTGCCTGCGGTTGAGCAGGCTGGCTGGAGAGCCAAGGCCAGTGCCCACTAGTGACTCTCCCGAGGGGTGTTGCCTTGGTGGGCTTCCCCGCTCTGGCCTTTTGTCACCTTGTTTGCTGAATCCAGGTAAAATTTTTGACCAAATTGGAAAGCAATTCCGGggagttggagtcagatctgtccctacccttgctgttgctaatgagctgtatgaccttagttgagccatttgatctctctgcaactgtttcttgggctgtgaaacatgggggttggagtctctgatttctaaggtccttttcagctgtaagttctaAGGCCTGTGAATACCACAGTGTGATGAAGCCAACTGGGTGGTGGTGAGGGCCTTGTAAGTTTCAGTCT-----TACTGCAAGCCGGCGATAGAATTCTCCCCATGTCTTT-------------------------------------------------------------------------------------------GTT----------------------------------------------------------------AAGAACTCTT--ggccgggcacagtggctcatgcctgtaatcccagcattttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctagccaagatggtgaaaccccgtctctact-------aaaaataca
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61922407 669 + 94855758 CGTTTCTTACAAACAAGAGATGCCT-----GAGAAGGAAGACCTGGTCACACAGGAGGTGATGAGTGGCTACGGGAAGAAATATGGTGGCTGGGGGAGGGGCGAGGGAGAAGC---ACCTGCAGTAGAGCAGGCTGGCTGGAGAG-CAAGGCCACTGCCCACTAGTGACTCCCCC-AAGGGTGCTGCCTTGGTGGGCTTCCCCACTCTGGCCTTTTGTCACCTTGTTTGCTGAATCCAGGTAAATTTTTTCATCAAATTGGAAAGCAATTCCGGGTAGtgggagtcagatgtgtccctgcccttgctgttgctaatgagccgtatgaccttagctgagccatttgatctctccgcaactgttcctcgggctgtgaaacgtgagggttggagtctctgagttctaaggtccttttcggctgtaagttctaAGGCCTGTGAATACCACAGTGTGATTAAGCCAGCTAGGTGGTGGTGAGGGCCTTGTAAGTTTGGGTCTCACTGCACTGCAAGCCAGCGGTAGA---------ATGTCTTT-------------------------------------------------------------------------------------------GTT----------------------------------------------------------------AAGAACTCTTGGggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaaaaaaaaataca
- i rheMac2.chr10 C 0 I 519
- s calJac1.Contig13114 21049 803 + 38599 CCCTTTTC-CAAACGA-AGATGCCTTGAGAAAGA---AAGAGCTGGTCATGCAGGAGGTGGAGAGTGGCTG--------------------AGGGAAGGGGCGA-GGAGAAGC-AGTGCTGAGGTCCAGCAGGCTGGCTGGAGAAGCCAGGCCGGTACCCACCAGTGACTC-CGTGAGTGGCGCTGCTGTGGT-GGCTTCCCCGCTCTGGAA-TCTGTCACCTCGTTTGCTGAATGCAGGTGAATTTCTGAATCAAACtggaaagaa--tgcaggtggaaggagtcagatc-ggccatgcccttgctgttgctactgagccgcgtgaccttaactgagccatgtgatctctctgcaactgtttcttgggctgtgaagcgtgggggctgcagtctctgagccttaaggtccctttcagctgtaagttctaGGGCCTGTGAATACCACGGTGTCATTAGACTACCTGGGTGCTGGTCAGGACCTTGTAAGTTTTGCTCTCACTGCACTGCAAGCCAGAAGTACAGTTCTCCTCATGTGTTTAAGAACTCTTGGCCCAggctggccgtggtggctcacgcctgtaatccaagcactttggaggccaaggcgggcggatcacctgaggttgggagttcaagaccaggcttgccaacacggtgaaaccccgtctttaaaaaaataaaattaAAATTAAAAAAAAGAACTCTT--ggcccagcacaatggctcatacctataatcccagcacttcgagaggctgagacaggtggatcacctgaggtcaggagttcaagaccagcctgaccaacgaggtgaaatgctgtctctact-------aaaaataca
- i calJac1.Contig13114 I 599 C 0
- a score=170311.0
- s ponAbe2.chr22 13842809 244 + 46535552 aaaattagctgggcgtggtggctagcacctgtaatcccagctactcaagaggctgaggcaggagaatcatttgaacccaggaggtgaaggttgcagtaagccga----gatcgcgccactacgctctaacctgggcgacaagagcaagactttatct-------------------------------------aaaaaaaaaaaaaaaaagaaCCCTTGTTGCTGAGAAATACTTCAGGAGTTCCTACCGCGTGCGACGCAATGTGCTCTCTGCTGTGCATGTG--
- s calJac1.Contig13114 21852 241 + 38599 aaaattagatgggcatggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggaaaatcgcttgaacccaggagacagagattgcagtgagccaa----gatggctccactgcactccaccctgggtgac-agagtgagacttcgtct-----------------------------------------gaaaaaaaaaaaagaaCTCTTGTTGCTGAGAACTACTTCAGgagttcctactgtgtgcaaagcaatgtgctctctgctatgcacatgga
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61923595 284 + 94855758 aaaattagccgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgatcgcatcactgcactccagcctgggcaac-agagagagactccgtctcaacaaaaaaaaaagaaaaaaagaaaaaaCAAGAAAAACAAAAACAAAAGAAAAGAACTCTTATTGCTGAGACATACTTCAGGGGTTCCTGCTGTGTGCAAAGCAATATGCTCTCTGCTGTGCGTGTG--
- i rheMac2.chr10 I 519 C 0
- s hg18.chr22 16122736 239 + 49691432 aaaactagctgggcgtggtggctagcgcctgtaatcccagctactcgggaggctgaggcaggagaatcatttgaacccaggagacggaggttgcagtgagccga----gattgcgccactacactctaacctgggcgacaagagcaagacttcgtct------------------------------------------aaaaaaaaaaaagaaCTCTTGTTGCTGAGAAATACTTCAGGAGTTCCTACTGTGTGCGAAGCAACGTGCTCTCTGCTGTGCATGTG--
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16139525 240 + 50165558 aaaattagctgggcgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcatttgaacccaggagacggaggttgcagtgagccgg----gattgcgccactacactctaacctgggcgacaagagcaagactttgtct-----------------------------------------aaaaaaaaaaaaagaaCTCTTGTTGCTGAGAAATACTTCCGGAGTTCCTACTGTGTGCGAAGCAACGTGCTCTCTGCTGTGCATGTG--
- i panTro2.chr22 C 0 C 0
- a score=206108.0
- s ponAbe2.chr22 13843053 237 + 46535552 GGGAGGTCTTTCCCCCTTTCTTCTGAGGGCTCATAATCTAATAACAGATAAAAATAATTCCAATAAAAGGCCATAAATGCAAAACGTCTCATCCTTTCCAATggcttcaaagtcaggaagatctgagtttgaggctaggtccaccattaggagtccttgggttact-cggctcatttaatctcagtttctttacttgtaaaatgggcataataacaactgtgtcacagggttatttta
- s panTro2.chr22 16139765 237 + 50165558 GGGAGGTCTTTCCCCCTTTCCTCTGAGGGCTCATAATCTAATAACAGATCAAAATAATTCCAATAAAAGGCCATAAATGCAAAATGTCTCATCCTTTCcactggcttcaaagtcaggaagatctgagtttgaggctaggtccaccattaggagtccttgggttact-cagctcatttaatctcagtttctttacttgtaaaatgggcataataacaactgtgtcacagggttatttta
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16122975 237 + 49691432 GGGAGGTCTTTCCCCCTTTCCTCTGAGGGCTCATAATCTAATAACAGATAAAAATAATTCCAATAAAAGGCCATAAATGCAAAATGTCTCATCCTTTCcaccggcttcaaagtcaggaagatctgagtttgaggctaggtccaccattaggagtccttgggttact-cggctcatttaatctcagtttctttacctgtaaaatggtcataataacaactgtgtcacagggttatttta
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61923879 236 + 94855758 GAGAGGTCTTTCCCCCTTTCCTTTGAGGGCTCAGAATCTAGTAACAGATAACAATAATTTCAATAAAAGGCCATACATGC-AAATGTCTCATCCTTTCcaagggcttcaaagtcaggaagatctgggtttgaggctgggtccaccactctgagtccttgggttact-tggctcatttaatctcagtttctttacttgtaaaatgggcataacaacaactatgtcacagggttatttta
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 22093 236 + 38599 gagagatcttcgcccctttcctttgagagctaataatctagtaacagataaaaataATTCCAACAAAAGGCCGTAAATGCAAAATGTCTCATCCTTTCCAatgggctcaaaatcaggcagatctgagtctgaggctaggttcattgtcatgagttctt-ggttactgtggctcatttaatctcagttt-tttacttgtaaaatgggcgtaacaacaactacgtcacagggttatttta
- i calJac1.Contig13114 C 0 I 148
- a score=140778.0
- s ponAbe2.chr22 13843290 154 + 46535552 agagttaaatgagataatatatgggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatct-ctactaaaaatat-aaaaa
- s panTro2.chr22 16140002 154 + 50165558 agagttaaatgagataatatatgggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatct-ctactaaaaatac-aaaaa
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16123212 154 + 49691432 agagttaaatgagattatatatgggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatct-ctactaaaaatac-aaaaa
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61924115 155 + 94855758 agagttaaatgagataatatatgggccgggcgcgagagttcacgcctgtaatcccagcactttgtgaggccgaggcgggcagatcacgaggtcaggagttcgagaccatcctggctaacacggtgaaaccccgtct-ctactaaaaatataaaaaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 22477 153 + 38599 AGAGTTAAATGAGACAATATATGGGCTGGGTGCCCTTAT--ATTcctgtaatcccagcactttgggaggctgaggggggcagatcatgaggtcaggagtttcagaccagcctggccaacatggcaaaaccccatctcctactaaaaatac-aaaaa
- i calJac1.Contig13114 I 148 C 0
- a score=535351.0
- s ponAbe2.chr22 13843444 703 + 46535552 ttagccaggcatggtggtgcacgcctgtaatcccagctactc--------------agagaactgcttgaacctgggaggcggagatttcagtgagccaagattgcgccactgtgctccagactgggcgacagagcaagactccatctcaggg-ggaaaaaaaaaaaGAGTTAAATGggccgggtgcaatggttcacacctgtattcccagcactttgggaggccaaggtgtgcaaatcacttgaggtcaggagttcaagaccagcctggccgatgcagcgaaactcagtctctaccaaaaatacaaaaagtaaccgggcatggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagagttgcttgaacccaggaggaagaggttgcagtgagctccagcctgggcaatagagtgagaccctgccacaaggaaaaaagaaaagataatatttgtaagacaattaccatggtgcttggcacatcattaagtgc-aaaataattgttagTGGcaagtatttattggctacagtgcagcaggcactgtgctaggccctgggatagtggagatgagggacaggactcctggtctggagcaactcaccagcaggtagggaaagaagcagggagcaatgacagtaccccgagagggccgtgacagagccaggtaggagaggcatcgacacggggagggcagcaggccctgac
- s panTro2.chr22 16140156 703 + 50165558 ttagccaggcgtggtggtgcacgcctgtaatcccagctactc--------------agagaactgcttgaacccgggaggcggagatttcagtgagccaagattgcgccactgcgctccagcctgggcgacagagcaagactccatctcaggg-gaaaaagaaaaaagaGTTAAATGggcctggtgcaatggttcacacctgtaatcccagcactttgggaggccaaggcgggcagatcacttgaggtcaggagttggagaccagcctggccgacgcagcgaaactcagtctctatcaaaaatacaaaaagtaacagggcttggtggtgcacacctgtaatcccagctacttgggaggctgaggcaagagagttgcttgaacccaggaggaagaggttgcagtgagctccggcctgggcaatagagtgagaccctgccacaaggaaaaaagaaaagataatatttgtaagacaattaccatggtggttgtcacatcattaagtgc-aaaataattgttagTGGcaagtatttattggctatagtgcagcaggcactgtgctaggccctgggatagtggagatgagagacaggactcctggtctgcagcaactcaccagcaggtagggaaagaagcagggagcaatgacagtaccctgagagggccgtgacagagccaggtaggagaggcatcgacacggggagggcagcgggccctgac
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16123366 703 + 49691432 ttagccaggcgtggtggtgcacgcctgtaatcccagctactc--------------agagtactgcttgaacttgggaggcggagatttcagtgagccaagattgcgccactgcgctccagcctgggcgacagagcaagactccatctcaggg-gaaaaagaaaaaaGAGTTAAATGggcctggtgcaatggttcacacctgtaatcccagtactttgggaggccaaggcgggcagatcacttgaggtcaggagttggagaccagcctggccaacgcagcgaaactcagtctctatcaaaaatacaaaaagtaacagggcttggtggtgcacacctgtaatcccagctacttgggaggctgaggcaagagagttgcttgaacccaggaggaagaggttgcagtgagctctggcctgggcaatagagtgagaccctgccacaaggaaaaaagaaaagataatatttgtaagacaattaccatggtggttgtcacatcattaagtgc-aaaataattgttagTGGcaagtatttattggctatagtgcagcaggcactgtgctaggccctgagatagtggagatgagggacaggactcctggtctGCAGCAACTCACCAGCAGGTAGGGAAAGAAGCAGGGAGCAATGACAGTACCCTGAGAGGGCCGTGACAGAGCCAGGTGGGAGAGGCATCGACACGGGGAGGGCAGCAGGCGCTGAC
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61924270 717 + 94855758 ttagccaggcgtggtggcaggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcacgccgctgcactccagcctgggcgacagagcgagactccatctgggggaaaaaaaaaaaaaagagtaaaaTGggctggttgcaatggttcacacctgtaatcccagcattttggaaggccaaggcaggcagatcacttgaggtcgggaggttcagaccagcttagccaacgcagtgaaactcagtctctaccaaaaatacaaaaagtaaccgggcatggtggtgcacacctgtaatcccagccacttgcgaggctgaggcaggagagttgcttgaacccgggaggaagaagttgcagtgagctctggcctgagcaatagagtgagaccctgccacaaggaaaaaagaaaagacaatgtttgtaagacaattaccatggtgcttggcacatcattaagtgc-aaaataattgttagTGGcaaatatttattggctacagtgcagcaggcactgtgctaggccctgggatagtggagatgagggacaggactcctgGTAGGGAGCAACTCACCAGCAGGTAGGGAAAGAAGCAGGGAGCAACGACAGTACCCTGAGAGGGCCGTGATGGAGCCAGGTAGGAGAGGCATTGACACAGGGAGGGCAGCAGGCCCTGA-
- i rheMac2.chr10 C 0 I 1
- s calJac1.Contig13114 22630 653 + 38599 ttagctgtgtgtagtggctcgcacctgtaatcccagctactc--------------ggagaactgcttgaacccaggaggcggaggttgcagtgagccaagatcatgctactgcactccagcctgggtgacacagcaagact--------GGG-------------AGAGTTAAAAGggttgggtgtgatagttcacgcctataatcccagcagtttgggaggctgagg---gtagattacttgaggtcagtagttcgagaccagcctgaccaacatggtgaaactcagtctctaccaaaaatacaaaaagtagccaggcgtggtggtggacacctgtaatcccagctacttgggagactgaggcaggagagtcacttgcacctgggaggcagaggttgcagtgagctccagcctgggccacagagtgagacCC--------------------------TATTTGTAGAACAATTACCATGGTGCTTGGCACATCATTAAGTGCAAAAATAATTGTT-GTGGcaaatatttattagctacagtgcagcaggcgctgtgctaggccctgggATAGCGGAGATGAGGGACAGGACTCTTGGTTTGGAGCGACTCACCAGCAGGTAGGGAAAGCAGCAGGGAGCAATGACAGGACCCTGACCGCACTGCGACAGAGCCAGGCAGGAGAAGCTTTGACACGGGGAAGGCGGCA-GCCCTGAC
- i calJac1.Contig13114 C 0 C 0
- a score=30445.0
- s ponAbe2.chr22 13844147 40 + 46535552 tgtggggtcaggcaggCATGTGAAGTAGTGACCACACTGC
- s calJac1.Contig13114 23283 40 + 38599 TGCTGGGTAAGGCAGGCATGTGAAGCAGTGAACACGCTGC
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61924988 40 + 94855758 TGCGGGGTCAAGCAGGCATGTGAAGTAGTGACCTCACTGC
- i rheMac2.chr10 I 1 C 0
- s hg18.chr22 16124069 40 + 49691432 TGCGGGCTCAGGCAGGCATGTGAAGTAGTGACCGCACTGC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16140859 40 + 50165558 tgcgggctcaggCAGGCATGTGATGTAGTGACCGCACTGC
- i panTro2.chr22 C 0 C 0
- a score=258534.0
- s ponAbe2.chr22 13844187 267 + 46535552 CTGTTGAAGCAGGGCCAGTGGCATTCACCGGAGTTAAGCAGACAGAGCAGTGGGGAGGTGGGAGAAGCTCAGGTGCCAATGAGCCCGACCCTCAGTGCTTCTGCAGAACTGAATGCAGTCAAGCAAGGTGGAGTGTGCATGGGATGATGGTGAGAAATGAGCCTGAAGGTTGGCGTCAGAAAGAAGGGACGTACACAAGAAGTGTTTCCTTTATATTAGACACACtatttccctttttgacctaaccactaggcagctcggaaccaa
- s panTro2.chr22 16140899 267 + 50165558 CTGTTGAAGCAGGGCCAGTGGTGTTCACCGGAGTTAAGCAGACAGAGCAGTGGGGAGGTGGGAGAAGCTCAGGTGCCATTGAGCCCGACCCTCAGTGCTTCTGCAGAAGTGAATGCAGTCAAGCAAGGTGGAGTGTGCATGGGATGATGGTAAGAAATGAGCCTGAAGGTTGGCGTCAGAAAGAAGGGATGTACACAAGAAATGTTTCCTTTATATTAGACACACtatttccctttttgacctaaccaccaggcagctcggaaccaa
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16124109 267 + 49691432 CTGTTGAAGCAGGGCCAGTGGTGTTCACCGGAGTTAAGCAGACAGAGCAGTGGGGAGGTGGGAGAAGCTCAGGTGCCAATGAGCCCGACCCTCAGTGCTTCTGCAGAAGTGAATGCAGTCAAGCAAGGTGGAGTGTGCATGGGATGATGGTAAGAAATGAGCCTGAAGGTTGGCGTCAGAAAGAAGGGACGTACACAAGAAATGTTTCCTTTATATTAGACACACtatttccctttttgacctaaccaccaggcagctcggaaccaa
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61925028 267 + 94855758 TGGTTGAAGCAGGGCCAGTGGTGTTCCCCGGAGTTAAGCAGACAGAGCAGTGGGGAGGTGGGAGAAGCTCAGGTGCCAATGAGCCCGGCCCTCAGTGATTCTGCAGAACTGAATGCAGTCAAGCAAGGTGGAGTGTGCATGGGATGATGGTGAGAAATGAGCCTGAAGGTTGGTGTCAGAAAGAAGGGACATACACAAGAAATGTTTCCTTTTTGTTGGACACACtatttccctttttgacctaaccaccaggcagctcggaaccaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 23323 267 + 38599 CCGTTGAAGCAAGGTCCGTGGTGTTGACCGGAGTTAAGCAGACAGGGCTGCAGGGAGGTGGGAGTAGCCGAGGTGCCATCAAGCCCAGGCCACAGTGCTCCTGCAGAACTGAATGCACTCAAGCAAGGCGGAGTGTCTGTGGGATGATGGTGAGAAATGAGCCTGAATGTTGGCCTCAGAAAGAAGGGACCTACACAAGAAATGTTTCCTTTTTATTGGACACACtatttcccccttcgacctaactgccaggcagctcagaaccaa
- i calJac1.Contig13114 C 0 I 439
- a score=324159.0
- s ponAbe2.chr22 13844454 399 + 46535552 gttttaggttcaaatgttgcagcACTTCCTT-----------------------------------------------------------GAATCCTGCTTTTCTGATGGAATTATTCCTTAGCCCCAGCTTTCTCTAGACCCTGGACCTCAACCTTTAATCTGGTTTTGGGGTTTCTGGCACTTGTGCCACTAATGATAAACTGCCTTGAATCTTTTTGGATACACTGAACATACATGGTGTGTAAATAAATAAATGAACTATAAAATACAAACATGCACAGGTAAGAGTGAAGTCAGAGCCCTTAGAGTGCGCTACACCAGGGC------------------------GGCAGCATCCCTGGTGCCCGGTCAGCGCCTGGCACATCATAGGAGCGCAATCAACAGCGGGTGACACAGAATGACGGCAGAGAACATTTCACCTAAAAGAAGGCTTCTCCACAGAGCACACCAGGACGGACC
- s panTro2.chr22 16141166 399 + 50165558 cttttaggttcaaatgttgcagcacttcctt-----------------------------------------------------------gaatcctacttttctgatggacttattccttagccccagctttctctagaccctggatctcaacctttaatctggttttggggtttctggcacttgtgccattaatgataaactgccttgaatctttttggatacactgaacatacatggtgtgtaaataaacaaaTGAACTATAAAATACAAACATGCACAGGTAAGAGTGAAGTCAGAGCCTTTAGAGTGCGCTACGCCAGGGC------------------------GgcagcatccctggtgcccggtcagcgcctggcacatcataggagcgcaatcaacaGCGGGTGACACAGAATGGCGGCAGAGAACATTTCACCTAAAAGAAGGCTTCTCCACAGAGCACACCAGGACGGACC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16124376 399 + 49691432 cttttaggttcaaatgttgcagcacttcctt-----------------------------------------------------------gaatcctacttttctgatgggcttattccttagccccagctttctctagaccctggatctcaacctttaatctggttttggggtttctggcacttgtgccattaatgataaactgccttgaatctttttggatacactgaacatatgtggtgtgtaaataaacaaaTGAACTATAAAATACAAACATGCACAGATAAGAGTGAAGTCAGAGCCTTTAGAGTGCGCTACGCCAGGGC------------------------GgcagcatccctggtgcccggtcagcgcctggcacatcataggagcgcaatcaacaGCGGGTGACACAGAATGGCGGCAGAGAACATTTCACCTAAAAGAAGGCTTCTCCACAGAGCACACCAGGACGGACC
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61925295 420 + 94855758 gttttaggttcaaATGTCGAAGCACTTCCTT-----------------------------------------------------------GAATCCAGCTTTTCTGATGGAATTATTCTTTAGCCCCAGCTTTCTCTAGACCCTGGACCTCAACCTTTAATCTGGTTTTGGGGTTTCTGGCACTTGTGGCATTAATTATAAACGGACTTGAATCTTTCTGAATACACTGAACACACACGGTGTGTAAATAAATAAATGAACTATAAAATACAAACATGCACA-ATAAGAGTGAAGTCAGAGcctttagagtgtgctacgtgagggcggcagaaga--ctgtcttgttcctggcagcatccctggtgcccggccagcgcctggcacaccataggagcgcaatcaacaGCGCGTGACACAGAATGACGGCAGAGAACATTTCACCTAAAAGAAACTCTCTCCACAGAACACATCAGGACGggcc
- i rheMac2.chr10 C 0 I 514
- s calJac1.Contig13114 24029 458 + 38599 TTTTTAGGTTCAAATGTTGCAGCACTTCCCTGAATACAACTTTTCTTTCtttttttttttttttaatttttatatCACACTGGTCCATTAGAATACAACTTTTCTGATGTGATTATTCTCTAGCTCCAGCTTCCTCT--ACCCTGAACCTCAACGTTTAATCTGGTTTGGGGGTTTCTGGCACTTGCGCCATTCATTATGAACTGCCTTGAATCTTTTTAAATATGCTGAACACACATGGTGTGTAAATAAATAAATGAACTATAAAATGCAAACATGCACAGACAAGAGTGAAGCCAGAGCCTTCAGAGCGCGCTACAGCagggcggcagcagagtctggcttgttcctggcagcgtccccagtgcccagtcagtgcctggcaccccacaggagcATGATCAACAGCAGGCGACACAGAATTATGGCAG-GGACACTTCACCTAAAAGAAGCCTCCTCCA---------------------
- i calJac1.Contig13114 I 439 I 471
- a score=183110.0
- s ponAbe2.chr22 13844920 259 + 46535552 CTGATCCTTGTGGCTGAAAGTCTTGTTGCTCCAGCCAGATGGCAAACTATACCTCAAGGACAGACACTTTGTCATATATGCCTGTGTCCCCCAGAGCTGCACCCAGCACAGAGCTGGTCACAAAGTGGCCTCCCCAAATTTCTGTGGCTTTAGCCTAACAAACACC-----TGCAATTCCTCACAGCTGAACAAAGACGAATGACCCTAATCCGTTCAAGTCAGGC--TGGACT-CCTTCCACTCTGATCATACATTTGGTTTTATA
- s hg18.chr22 16124844 258 + 49691432 CTGATCCTTGTGGCTGAAAGTCTTGTTGCTCCAGCCAGATGGCAAACTACACCTCAAGGACAGACAC-TTGTCATACATGCCTGTGTCCCCCAGAGCTGCACCCAGCACAGAGCTGGTCACAAAGTGGCCTCCCCAAATTTCTGTGGCTTTAGCCTAACAAACACC-----TGCAATTCCTTATAGCTGAACAAAGATGAATGACCCTAACCCGTTCAAGTCAGGC--TGGACT-CCTTCCACTCTGATCATACATTTGGTTTTACA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16141634 258 + 50165558 CTGATCCTTGTGGCTGAAAGTCTTGTTGCTCCAGCCAGATGGCAAACTACACCTCAAGGACAGACAC-TTGTCATACATGCCTGTGTCCCCCAGAGCTGCACCCAGCACAGAGCTGGTCGCAAAGTGGCCTCCCCAAATTTCTGTGGCTTTAGCCTAACAAACACC-----TGCAATTCCTTATAGCTGAACAAAGATGAATGACCCTAACCCGTTCAAGTCAGGC--TGGACT-CCTTCCACTCTGATCATACATTTGGTTTTACA
- i panTro2.chr22 C 0 C 0
- s calJac1.Contig13114 24958 259 + 38599 CCAATCCTTGCGGCTGAAAGCCTTATTGCTCCAGCTGGATAGCAAACCACACCTCAAGGACAGATACTCTGTCACACATGCCTGTGTTCCCCAGAGCTGCACCCAGCACAGAGCTGCTCACAAAGTGGCCTCCCCAAATTTCTGTGGCTTTAGCCTGACAAACACC-----CACAA-TCCTCATGGCCGAACAAAGACGAGTGACCCTAACCCATTGGAGTCAGGC--TGGACTAGCTTCCACTCCGGTCACACACCCGCTTTTACA
- i calJac1.Contig13114 I 471 C 0
- s rheMac2.chr10 61926229 221 + 94855758 -----------GGCTGAAAGTCTTGTTGCTCCAGTGGGATAGCA-----------AAGGAC-GACACTTTGTCATACATGCCTGTGTTC----GAGCTGCA-CCAGCACAGAGCTGGTCACAAAGTGGCCTCCCCAAATTTCTGTGGCTTTAGCCTAACAATTCCTTATAGTGCAATTCCTTATAGCTGAACAAAGACGAACGACCCTAACCCATTCAAGGTAGTCAGTGGACTACCTTCCACTCTGAT------------------
- i rheMac2.chr10 I 514 I 355
- a score=215562.0
- s ponAbe2.chr22 13845179 301 + 46535552 GAGCGCTGAGCGAGAAGAAGAAAGAACGGCCTCTTACTGGCCCGAGTTGAAGGTCTTTGAGCACATTTTTCTCAACAGCATAATCTGGCTCCCTGACACAAAA-GGCAGCGGAGGGAAGGGACAGCGGCTCCTAA-TGAACAGAGATGGATGGTGGCCGGGCCTCTGCCACCACTGCTGTGCCCACTGGGCAGACCAGCCATATCTCCTG-----------------GCTCAGGCCAAAGACTAGGGCAGGTGACACATGGGGTACTCACAGGAGAGCTGTGCTCAGGGCTTCCTGCTGGCCCCGGAACCTTCCAGAATG
- s calJac1.Contig13114 25217 314 + 38599 GAGTGCTGAGTGAGAGGAAGAAAGAACGGCCTCTTACCAGCCCAAGGGGAAGGTCTTTGCGCACGTTTTTCTCAACAGCGTAATCTGGTGTCCTGACACAAAAGGGCAGGGGAGAAAAGGGACAGCGGCTCCTAA-TGAACAGAGATGGATGGTGGCCAGGCCTCTGCTACCACTGCTCTGCCCACTGGGCAGACCAGCCATTTCTCCTGGCTCCTATCAAGAGTCAGCTCAGGGCAAAGACTGGGCTGGATGACACATG-----TCCAGAGGAGACCTGTGCTCAGGGCTTCCTTCTGGCCCCGGAACCTTCCCGAGTG
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61926805 318 + 94855758 GAGCACTGAGAGAGAGGAAAAAAGAACAGCCTCTTACTGGCCCGAGTTGAAGGTCTTTGAGCACATTTTTCTCAACAGCATAATCTGGCTCCCTGACACAAAG-GGCAGGGGAGAG-AGGGACAGCAGCTCCTAATTGAACAGAGATGGATGGTGGCCCAGCCTCCACGATCACTGCTGTGTCCACTGGGCAGACCAGCCATGTCTCCTGGCTCCTACCAAGAGTCAGCTCAGGCCAAAGACTAGGGGAGATGACACATGGGGTACTCACAGGAGAGCTGTGCTCAGGACTTCCTGCTGGCCCCAGAACCTTCCAGAATG
- i rheMac2.chr10 I 355 C 0
- s hg18.chr22 16125102 299 + 49691432 AAGCGCTGAGCGACAGGAAGAAAGAATGG-CTCTTACTGG-CCGAGTTGAAGGGCTTCGAGCACATTTTTCTCAACAGCACAATCTGGCTCCCTGACACAAAA-GGCAGGGAAAGGAAGGGGCAGCGGCTCCCAA-TGAACAGAGACGGATGGCGGCCGGGCCTCTGCCGCCACTGCTGTGCCCACTGGGCAGACCAGCCACATCTCCTG-----------------GCTCAGGCCAAAGACTAGGGCAGATGACACATGGGGTACTCACAGGAGAGCTGTGCTCAGGGCTTCCTGCTGGCCCCGGAACCTTCCAGAATG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16141892 299 + 50165558 AAGCGCTGAGCGACAGGAAGAAAGAATGG-CTCTTACTGG-CCGAGTTGAAGGGCTTCGAGCACATTTTTCTCAACAGCACAATCTGGCTCCCTGACACAAAA-GGCAGGGAAAGGAAGGGGCAGCGGCTCCCAA-TGAACAGAGACGGATGGTGGCCGGGCCTCTGCCGCCACTGCTGTGCCCTCTGGGCAGACCAGCCACATCTCCTG-----------------GCTCAGGCCAAAGACTAGGGCAGATGACACATGGGGTACTCACAGGAGAGCTGTGCTCAGGGCTTCCTGCTGGCCCCGGAACCTTCCAGAATG
- i panTro2.chr22 C 0 C 0
- a score=302348.0
- s ponAbe2.chr22 13845480 371 + 46535552 GCCTCTCACACACTCTCCGCCCTCCCTCCTTCTCTCTTTCTCTCCTGGAACCTTCCAGAGTGGCCTCTCACACACTCCCctccctccctccttctctgtctctctttctctctctctttcAGTGAAAGGACTCCCTTGGCAAGAGTATCGGGTTTCAGTTGTCTGTGTCCTGGGAAATTACAAGATCTTTCCCCTTTCTCTTTTTAGCTAGGATTACACATGCAGAGCCATTTGGCTCCCCTGGCCTGCCCAGCTGCTGCCGGCC-GGGCCGGGGGATCGTGCCAGGCGGCCCAGCCAGAGGTGGGCTGGGTCACAGGGGTGAGCTGCCAGGCCTGCTCACCCCTCTTCTTGGTGTGATCCCCTCAAGTCCA
- s panTro2.chr22 16142191 365 + 50165558 GCCTCTCACACACTCcccgccctccctccttctctctgtctctcccggaaccttccagagtggcctctcacacactcccctccctccctccttctctgtc------tctctctcgctctcAGTGAAAGGACTTCCTTGGCAAGAGTGTCAGGTTTCAGTTGTCTGTGTCCCGGGAAATTACAAGATCTTTCCCCTTTCTCTTTTTAGCTAGGATTACACATGCGGAGCCATTTGGCTCCCCTGGCCTGCGCAGCTGCTGCCGGCC-GGGCCGGGGGATCGTGCCAGGCAGCCCAGCCAGAGGTGGGCTGGGTCACAGGGGTGAGCTGCCAGGCCTGCTCACCCCTCTTCTTGGTGTGATCCCCTCAAGTCCA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16125401 365 + 49691432 GCCTCTCACACACTCCCCGCCCTCCCTCCTTCTCTCTGTCTCTCCCGGAACCTTCCAGAGTGGGCTCTCACACACTCCCctccctccctccttctctgtc------tctctctctctctcAGTGAAAGGACTTCCTTGGCAAGAGTGTCAGGTTTCAGTTGTCTGTGTCCTGGGAAATTACAAGATCTTTCCCCTTTCTCTTTTTAGCTAGGATTACACATGCAGAGCCATTTGGCTCCCCTGGCCTGCGCAGCTGCTGCCGGCC-GGGCCGGGGGATCATGCCAGGCAGCCCAGCCAGAGGTGAGCTGGGTCACAGGGGTGAGCTGCCAGGCCTGCTCACCCCTCTTCTTGGTGTGATCCCCTCAAGTCCA
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61927123 320 + 94855758 GCCTCTCACACACTCCCctccctccctccttctctctctctc--------------------------------------------------tctctgtc--tctttctctctctctctcAGTGAAAGGACTGCCTTAGCAAGAGTATCAGGTTTCAGTTGTCTGTGTCCTGGGAAATTACAAGATCTTTCCCCTTTCTCTTTTTAGCTGGGATTACACATGCAGAGCCATTTGGCTCCCCTGTCCTGCCCGGCTGCTGCCGGCTGGGGCTGGGGGATCGTGCCAGGCGGCCCAGCCAGAGGTGGGCAGGGTCACAGGGGTGAGCTGCCAGGCCTGCTCACCCCTCTTCTTGGTGTGATCCCCTCAAATCCA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 25531 289 + 38599 GCCTCTCACGCACTCccctccctccctccttccctctcttcc----------------------------------------------------------------cctcacccccccACAGTGAAAGGACT-CCTTGGCAAAAGTATCAGGTTTCAGTTATCTGTGTCCTGGGAAATTACAAGGTCTTTCCCCTTTCTCTTTTTAGCCGGGATTACACAAGCAGAG-----------------CCTGCCCAGCTGCTGTCACCC-AGGCCAGGGGATCACGCCAGGCGACCCAGCTAGAGGTGGGCAGGGTCACAGAGTCCAGCTGCCAGGCCTGCTCACCCCTCTTCTTGGTGTGATCCCCTCAAGTCCA
- i calJac1.Contig13114 C 0 C 0
- a score=49714.0
- s ponAbe2.chr22 13845851 55 + 46535552 ATCCCCAGGGACCTTCCCCGGGAATGCTGAGAGCACCAGCTGTCCCGGCCATGTC
- s calJac1.Contig13114 25820 55 + 38599 ATTCCCAGGGACCTTCCCCAGGCATGCTGAGGGCACAGGCTGTCCCCACCACGTC
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61927443 55 + 94855758 ATCCCCAGGGACCTTCCCCAGGCATGTGGAGAGCACCAGCTGTCCCGGCCACATC
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16125766 55 + 49691432 ATCCCCAGGGACCTTCCCCAGGAATGCTGAGAGCACCAGCTGTCCCGGCCATGTC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16142556 55 + 50165558 ATCCCCAGGGACCTTCCCCAGGAATGCTGAGAGCACCAGCTGTCCCGGCCATGTC
- i panTro2.chr22 C 0 C 0
- a score=117639.0
- s ponAbe2.chr22 13845906 128 + 46535552 AGGCATCTGGCCACCAGGTCTCTTTCCACTCCAGGGGCAACCACCGCCAGAGGGAAAAACGGAAACACCAGGTTATTTGTGATCTGCCTACTCACTCCTCATTTAGAGAGAGAAGCAGGAGGCCAGGG
- s panTro2.chr22 16142611 128 + 50165558 AGGCATCTGGCCACCAGGTCTCCTTCCACTCCAGGGGCAACCACCGCCAGAGGGAAAAACGGAAACACCAGGTTATTTGTGATCTGCATACTCACTCCGCGTTTAGAGAGAGAAGCAGGAGGCCAGGC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16125821 128 + 49691432 AGGCATCTGGCCACCAGGTCTCCTTCCACTCCAGGGGCAACCACCGCCAGAGGGAAAAACGGAAACACCAGGTTATTTGTGATCTGCATACTCACTCCTCGTTTAGAGAGACAAGCAGGAGGCCAGGG
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61927498 128 + 94855758 AGGCATCTGGCCACCAGGTCTCCTTCCACTCCAGGAGCAACCACTGCCAGAGGGAAAAACGGAAACACCAGGTTATTTGTGATCTGACTACTCACTCTTCGTTGAGAGAGAGAAGCAGGAGGCCAGGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 25875 128 + 38599 AGGCATCTGGCCCCCAGGTCTCCTTCCCCTCCAGGGGCAGCCACCATCAGAGGGAAAAATGGAAACACCAGGTTATTTGCGATCTGACTACTCACTCCTCATTTCGAGAGACAAGCAGGAGGCCAGGG
- i calJac1.Contig13114 C 0 C 0
- a score=250324.0
- s ponAbe2.chr22 13846034 347 + 46535552 GAATAGATGGGACTGTGGGAACAGCCGAGGGCAGAGGGTGAAGGGTGGCGATCAGAAGGAAAGACGGAATGCCCACACATTCCCTGCCGCTCTGGGCT---------------------------------------------------CCAGCCGT---GGAGGAAGCGGGGCTCAGAGGACATT---------GCACCAGACAGGTCT------------------------TGTTTAGAAAACTGG--------AAAAGAACAAATATTG----ATTACAAGGGTGCAGGAGAGCGGGCCCTTCCAACATCAAAAATATGTATTCagccaggcgaagtggctcacgcttgtaatcccagcactttgggaggcaaaggcagga-ggatcgcttgggcccaagagtttgacaccagcctgggcagcatggtaaaacccagtctcta
- s calJac1.Contig13114 26003 446 + 38599 GAATAGACGGGACTGTGGGAACAGCAGAAGGCAGAGGGTGAAGGGTGCCGATCAGAAGGAAAGGTGGAATCCCCACACATTCCCTGCCGCTCCAGGCTTGTTTAGAAAATTGGAAAAGGggccgggtgaggtggcttatgcctgtaatcccagcactttgggaggccgaggggtgcggatcacctgaggtcaggagttcaagaccagcctggccaacatggagaaacccatctctattaaaaaAATTAATAAATGTTTAAAAAAAGAAAATCGGAAAAGGACAGGGGTGCAGGACACTGGGCCCTTCCATCCTCAATCATACATATTCagccaggtgaagtgactcacgcctgtaatcccagcactttgggaggcaaaggcagga-ggatcgcttgggcccaggagtttgagaccagcctgggcaacatagcgaaactcagtctcta
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61927626 346 + 94855758 GAATAGATGGGACTGTGGGAACAGCAGAGGGCAGAGGGTGAAGGGTGGCGATCAGAAAGAAAGACAGAAT--CCCCACATTCCCTGCCCCTCTGGGCT---------------------------------------------------CCGGCCAT---GGAGGAAGTGGGGCTCAGAGGACATT---------GCACCAGACAGGTCT------------------------TGTTTAGAAAATTGG--------AAAAGAACAAATATTG----ATTGCAGGGGTGCAGGAGAATGAGCCCTTCCATCATCAACTATATGTATTCagccaggcgaagtggctcacgcttgtaatcccagcactctgggaagctgaggtaggagggatcacttgggcctgggagtttgagaccagcctgggcaacatggcaaaacccagtctcta
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16125949 347 + 49691432 GAATAGATGGGACTGTGGGAACAGCCAAGGGCAGAGGGTGAAGGGCGGCGATCAGAAGGAAAGACGGAATGCCCACACATTCCCTGCCGCTCCCGGCT---------------------------------------------------CCAGCCGT---GGAGGAAGCGGGGCTCGGAGGACATT---------GCACCAGACAGGTCT------------------------TGTTTAGAAAATTGG--------AAAAGAACAAATATTG----ATTACAAGAGTGCAGGAGAATGGGCCCTTCCATCATCAAAAACAGGTATTCagccaggcgaagtgactcacgcttgtaatcccagcactttgggaggcaaaggcagga-ggatcgcttgggcccaagagtttgagaccagcctgggcagcatggtgaaacccagtctcta
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16142739 347 + 50165558 GAATAGATGGGACTGTGGGAACAGCCAAGGGCAGAGGGTGAAGGGCGGCGATCAGAAGGAAAGATGGAATGCCCACACATTCCCTGCCGCTCCCGGCT---------------------------------------------------CCAGCCGT---GGAGGAAGCGGGGCTCAGAGGACATT---------GCACCAGACAGGTCT------------------------TGTTTAGAAAATTGG--------AAAAGAACAAATATTG----ATTACAAGAGTGCAGGAGAATGGGCCCTTCCATCATCAAAAACAGGTATTCagccaggcgaagtgactcacgcttgtaatcccagcactttgggaggcaaaggcagga-ggatcgcttgggcccaagagtttgagaccagcctgggcagcatggtgaaacctagtctcta
- i panTro2.chr22 C 0 C 0
- a score=141026.0
- s ponAbe2.chr22 13846381 193 + 46535552 caaaaaattccaaaaattagctgggtgtggtgatg--tgtctgtggtcccagccattcaggtggctgaggtgggaggactgcttgggcgggggaggtcgaactatgttcacaccacagcattccagcctggatgacagaatgagaccctgtttctaataataagagtaataataataataaAATACATACTCACT
- s calJac1.Contig13114 26449 179 + 38599 caaaaaatttcaaaaattagctgggtgtggtgacgcatgcctgtgatcccagccattcaggaggccgagg-------------tgggccagggaggtgaaaccatgttcataccatggcattccagcctggatgacagaataagaccctgtttcTAACAGTAAGAGGAATACTA---ATATAATTCATACTCAGT
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61927972 190 + 94855758 caaaacatttcaaaaatatttt---tgtggtgacg--tgtctgtggtcccagccactcgggaggctgaggtgggaggattgcttgggctgaggaggtcgaaccgtgttcacaccacggcattccagcctggatgacagaatgaggccctgtttctaataataagaGTAATAATAATCATAAAATACATACTCACT
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16126296 193 + 49691432 caaaaaataccaaaaattagctgggtgtggtgacg--tgtctgtggtcccagccattcgggtggctgaggtgggaggattgcttgggcccgggaggtcgaaccatgttcacaccatggcattccagcctggatgacagaatgagaccctgtttctaataataacagtaataataataataaAATACATACTCACT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16143086 193 + 50165558 caaaaaattccaaaaattagctgggtgtggtgacg--tgtctgtggtcccagccattcgggtggctgaggtgggaggattgcttgggcccgggaggtcgaaccatgttcacaccatggcattccagcctggatgacagaatgagaccctgtttctaataataacagtaataataataataaAATACATACTCACT
- i panTro2.chr22 C 0 C 0
- a score=100514.0
- s ponAbe2.chr22 13846574 104 + 46535552 AGCTATGACTCTGCTTTACAGGATAATTGGGGCAGTAATGTTCTTGGGTGAAACTGGGTAACCTAATTTGAAAGGTCTGGGAAACATGGCCCAATTTCAGCCTC
- s panTro2.chr22 16143279 104 + 50165558 AGCTATGACTCTGCTTTACAGGATAATTGGGGCAAAAATGTTCTTGGGTGAAACTGGGTAACCTAATTTGAAAGGTCTGGGAAACATGGCCCAATTTCAGCCTC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16126489 104 + 49691432 AGCTATGACTCTGCTTTACAGGATAATTGGGGCAAAAATGTTCTTGGGTGAAACTGGGTAACCTAATTTGAAAGGTCTGGGAAACATGGCCCAATTTCAGCCTC
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61928162 104 + 94855758 AGCTACGATTCTGCTTTACGGGATAACTGGGGCAAAAATATTCCCGGGTGAAACTGGCTAACCTAATTTGAAAGGTCTGGGAAACATGGCCCAATTTCAGCCTC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 26628 104 + 38599 AGCTACTACTCTGCTTTACAGGATAACTGGGGCAAAAGTGTTCCGGGGTGAAACTGGGTAACCTAGTTTGAAAGGTCTGGGAAACATGGCCCAATTTCAGCTTC
- i calJac1.Contig13114 C 0 C 0
- a score=191565.0
- s ponAbe2.chr22 13846678 251 + 46535552 GCTCGCCACTCACAGGCCAGGTAGAGGTTGCGGTTCATAACATACTggacactagacatcactaatgccttcattctacatatgggaaaaccatggctgagaggtcacctgatctcccaggttcactcagagacttggggatgggccgagctccagagcccgggccttgcc-----ctgctccacacccgtacAATTGGCCAAGTTCCCTGGCCAACTAAGGAAGGAGTGCAAGGTGACTGAAGAAAACAAAAACA
- s calJac1.Contig13114 26732 251 + 38599 ACTCACCACT--GCGGCCAAGTGGAGATTGAGGTTCGTAACATACGCGATACCAGACATCAccaaagccttcattctacaaatgggaaaaccatggctgaaagctcacctgatctcccaagttcactcagagacttgaggatgggcggagctccagagtccaggccctgccccactccGCTCCAC-CCCATACACC--TTGGAGTCCCCTGGCCAACCAAGGAAGGAGTGTAAGGTGACTtaagaaagcaaaaaca
- i calJac1.Contig13114 C 0 I 1072
- s rheMac2.chr10 61928266 248 + 94855758 GCTCGCCACTCACAGGCCAAGCGGAGGTTGCGcttcacaacatactggacactagacatcaccaacgccttcactctacaaatgggaaaaccacggctgagaggtcacctggtctccccagttcacccagagacttggggatgggccgagctccagagcccagaccttgcc-----ctgctccaC-CCCACACAGC--ACGAAGTTCCCTGGCCAACTAAGGAAAGAGTGCAAGGTGACCGGAAGAAAACAAAGCA
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16126593 248 + 49691432 GCTCGCCACTCACAGGCCAAGTGGAGGTTGCGGTtcataacatactggacactagacatcactaatgccttcattctacaaatgggaaaaccatggctgagaggtcacctgatctcccaagttcactcagagacgtggggatgggccgagctccagagcctgggccttgcc-----ctgctccaC-CCCATACAGC--ACGAAGTTCCCTGGCCAACTAAGGAAGGAGTGCAAGGTGACTGAAGAAAACAAAAACA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16143383 248 + 50165558 GCTCGCCACTCACAGGCCAAGTGGAGGTTGCGGTtcataacatactggacactagacatcactaatgccttcattctacaaatgggaaaaccatggctgagaggtcacctgatctcccaagttcactcagagacttggggatgggccgagctccagagcctgggccttgcc-----ctgctccaC-CCCATACAGC--ACGAAGTTTCCTGGCCAACTAAGGAAGGAGTGCAAGGTGACTGAAGAAAACAAAAACA
- i panTro2.chr22 C 0 C 0
- a score=798536.0
- s ponAbe2.chr22 13847175 715 + 46535552 AATTTTCACACCCTTAATAGTGGGCTGGGGAGGAGTCAGGATCAGAGCCTCTAGCTCAGATTTCCTTCCCTGAGAGGAT---GTCTTAGAAACTGCATGCTGTGCAGAGTCCTATCATTCAGAAGAAACACAAAACCCAAGCTCTGGGGAGTCACGTGGCCACCACGGATGCCCCGGCCTCGGACTAAGCTAAGGGCATTAGCCCCGGTGGCCTGTAGCTACTCTGCAGCTCTGATCAGTCCTACAGACACACGGCACCCCCCACCTGTCACCTTTAGGACCCTCCAGTCAGGCCCCCTTAAGACGCAATGTTCCCCGTGCTCACCTTTGGGGCTTACTCTGCTGCTAAGGAAACAGCATGCAACTTCCCAGGGTTATGAGAAATAACTTTCCTAGGAATGTCACCAGCTGCAGACGCCCCTGTCATAAACTGTCCCAGCTCTAAGCCGCCTAGGGCTTTTATCCCCTCCTCTTAGCTACTCATTACCCAGCTTAATTAGGCCAGGAAATGCTGGCGCTGAGGACACTCTCGGCAGGAGGCAGGGCTGGAGGAGAGATTCTCAGCAGCGCCACTTCCTGAGGCTTGATCT-GGGGGCTGGGGAAAGCTGTGGAGGAGGACGGCTGGGGATGGCAGGCTGCGTCCTCCAGTGAACAGCTGCTGGGAATGAAGCAGGGATGCACGCATTTGCTCCCCAGGCCCTCTAGGGAGCTGAGGGTT
- s panTro2.chr22 16143878 718 + 50165558 AATTTTCACACCCTTAATAGTGGGCTGCGGAGGAGTCAGGATCAGAGCCTCTAGCTCAGATTTCCTTCCCTGAAAGGATACGGTCTTAGAAACTGCATGCTGTGCAGAGTCCTGTCATTCAGAAGAAAGACAAAACCCAAGCCCTGGGGAGTCACGTGGCCACCACGGATGCCCCGGCCTCGGACTAAGCTAAGGGCATTAGCCCGGGTGGCCTGTAGCTGCTCTGCAGCTCTGATCAGTCCTACAGACACACGGCACCCCCCACCTGTCACCTTTAGGACCCTCCAGTCAGGCCCCCTTAAGATGCAATGTTCCCCATGCTCACCTTTGGGGCTTACTCTGCTGCTAAGGAAACAGCATGCAACTTCCCAGGGTTATGAGAAATAATTTTCCTAGGAATGTCACCAGCTGCAGACGCCCCTGTCATAAACTGTCCCAGCTCTAAGCCGCCTAGGGCTTTTATCCCCTCCTCTTAGCTACTCATTACCCAGCTTAATTAGGCCAGGAAATGCTGGCGCTGAGGACACTCTCGGCAGGAGGCAGGGCTGGAGGAGAGATTCTCAGCAGCGCCACTTCCTGAGGCTTGATCT-GGGGGCTGGGGAAGGCCGTGGAGGAGGTCGGCTGGGGATGGCAGGCTGCGTCCTCCAGTGAACAGCTGCTGGGAACGAAGCAGGGATGCACGCATTTGCTCCCCAGGCCCTCCAGGGAGCTGAGGGTT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16127087 718 + 49691432 AATTTTCACACCCTTAATAGTGGGCTGCGGAGGAGTCAGGATCAGAGCCTCTAGCTCAGATTTCCTTCCCTGAAAGGATACGGTCTTAGAAACTGCATGCTGTGCAGAGTCCTATCATTCAGAAGAAACACAAAACCCAAGCCCTGGGGAGTCACGTGGCCACCACGGATGCCCCGGCCTCGGACTAAGCTAAGGGCATTAGCCCGGGTGGCCTGTAGCTGCTCTGCAGCTCTGATCAGTCCTACAGACACATGGCACCCCCCACCTGTCACCTTTAGGACCCTCCAGTCAGGCCCCCTTAAGATGCAGTGTTCCCCATGCTCACCTTTGAGGCTTACTCTGCTGCTAAGGAAACAGCATGCAACTTCCCAGGGTTATGAGAAATAATTTTCCTAGGAATGTCACCAGCTGCAGACGCCCCTGTCATAAACTGTCCCAGCTCTAAGCCGCCTAGGGCTTTTATCCCCTCCTCTTAGCTACTCATTACCCAGCTTAATTAGGCCAGGAAATGCTGGCGCTGAAGACACTCTCGGCAGGAGGCAGGGCTGGAGGAGAGATTCTCAGCAGCGCCACTTCCTGAGGCTTGATCT-GGGGGCTGGGGAAGGCTGTGGAGGAGGTCGGCTGGGGATGGCAGGCTGCGTCCTCCAGTGAACAGCTGCTGGGAACGAAGCAGGGATGCACGCATTTGCTCCCCAGGCCCTCCAGGGAGCTGAGGGTT
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61928759 718 + 94855758 AATTTTCACACCCTTAAAAGTGGGCCGGGGAGGAGTCAGGATCAGAGCCTCTAGCTCAGATTTCCTTCCCTGAGAGGATACGGTCTTAGAAACTGCATGCTGTGCCGAGTTCCGTCATTCAGAAGAAACAGAAAACCCAAGCCCTGGGGAGTCACATGGCCACCACGGACATCCCGGCCTCAGTCTAACCTAAGGGCATTAGCCCGGGTGGCCTGTAGCTGCTCTGCAGCTCTAATCAGTCCTACAGACGCACGGCACCCCCAACCTGTCACCTTTAGGACCTTCCAGTCAGGTCCCCTTAAGACGCAGTGTTCCCTGTGCTCACCTTTGGGGCTTACTCTCGTGCTAAGGAAACAGCATGCAACTTCCCAGGGTTATGAGAAATAACTTTCCTAGGAATGTCACCAGCTGCAGACGCCCCTGTCATAAACTGTCCCAGCTCTAAGCCGCCTAGGGCTTTTATCCCCTCCTCTTAGCTACTCATTACCCAGCTTAATTAGGCCAGGAAATGCTGGCGCTGAGGACACTCTCGGCAGGAGGCAGGGCTGGAGGAGAGATTCTCAGCAGCGCCACTTCCTGAGGCTTGATCT-GGGGGCTGGGGAAGGCCGTGGAGGAGGACGGCTGGGGATGGCAGGCTGCGTCCTCCAGTGAACAGCTGCTGGGAACGAAGCAGGGATGCACGCATTTGCTCCCCAGGCCCTCCAGGGAGCTGAGGGTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 28055 704 + 38599 AATTTTCACACCCTTAAAAGTGGGCCGGGGCAGAGTCAGGATCAGAGCCTCTCGCTCAGATTTCCTGCCCTGAGAGGATACGG-----GGA-------GCTGTGCAG-GTCCTATCATTCAGAAGAAACACAAAACCCGAGCCCCGGGGAGTCACGTGGCCACCAAGGACGCCCCAGCCTCGGACTAAGCTGAGGGCGTGAGCCCGGGTGGCCTGTAGCTGCTCTGCTGCTCTGATCAGTCCTGAAGACGCACGGCACCCCC-ACCTGTCACCTTTAGGACCCTTGGGTCTGGCCTCCTTAAGACTCAGTGTTCCCGGTGCTCACCTTTGGGGCTCACTCTGCTGCTAAGGAAACAGCAAGCAACTTCGCAGGGTTCTGAGAAATAACTTTCCTAGGAATGTCACCAGCTGCAGACGCCCCTGTCATAAACTGTCCCAGCTCTAAGCCGCCTAGGGCTTTTATCCCCTCCTCTTAGCTACTCATTACCCAGCTTAATTAGGCCAGGAAATGCTGGCGCTGAGGACACTCTCGGCAGGAGGCAAGGCTGGAGGAGAGATTCTCAGCAGCGCCACTTCCTGAGGCTTGAGCTGGGGGGCTGGGGAGGGCCGTGGAGGAGGACGGCTGGGGACTGCAGGCTGCGTCCTCCAGTGAACAGCTGCTGGAAACGGAGCAGGGATGCGCGCATTTGCTCCCC-GGCCCTCCAGGGAGCTGAGGGTT
- i calJac1.Contig13114 I 1072 C 0
- a score=69329.0
- s ponAbe2.chr22 13847890 70 + 46535552 GCACTTGTTTACGGTAACAGCACCGGATCTGAAGGCCTTGGAAGGCTCTGCCTGCCCCCACCCCAACCCT
- s calJac1.Contig13114 28759 69 + 38599 GCGCTTGTTTACGGGAACAGCACGGGATCTGAAGGCC-TGGAAGGCTCTGCCCGCACCCGCCCCAGCCCT
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61929477 69 + 94855758 GCACTTGTTTACGGTAACAGCACCGGATCTGAAGGCC-TGGAAGGCTCTGCCTGCCCCCACCCCAACCCT
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16127805 70 + 49691432 GCACTTGTTTACGGTAACAGCACCGGATCTGAAGGCCTTGGAAGGCTCTGCCTGCCCCCACCCCAACCCT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16144596 70 + 50165558 GCAGTTGTTTACGGTAACAGCACCGGATCTGAAGGCCTTGGAAGGCTCTGCCTGCCCCCACCCCAACCCT
- i panTro2.chr22 C 0 C 0
- a score=176944.0
- s ponAbe2.chr22 13847960 145 + 46535552 CCCATCTCAATTAACTAGCTTCACCACCCCGCCCCCACTCTTTCCTAGGGAAGAGGTTGAAACCTCAGTTACCACTCACAATATTTCAGCCCCAACCCTGACATAATCACAGTCAAAGACCCAGCCTGAGATGCCTTCCATTTTC
- s panTro2.chr22 16144666 145 + 50165558 CCCATCTCAATTAACCAGCTTCACCACCCCACCCCCACTCTTTCCTAGGGAAGAGGTTGAAACCTCAGTTACCACTCACAATATTTCAGCCCCAACCCTGACATAATCACAGTCAAAGACCCAGCCTGAGATGCCTTCCATTTTC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16127875 145 + 49691432 CCCATCTCAATTAACCAGCTTCACCACCCCACCCCCACTCTTTCCTAGGGAAGAGGTTGAAACCTCAGTTACCACTCACAATATTTCAGCCCCAACCCTGACATAATCACAGTCAAAGACCCAGCCTGAGATGCCTTCCATTTTC
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61929546 145 + 94855758 CCCATCTCAATTAACCAGTTTCACCACCCCGCCCCCACTCTTTCCTCGGGAAGAGGTTGCAACCTCAGTTACCACTCACAATATTTCAGCCCCAACCCTGACATAATCACAGTCAAAGACCCAGCCTGAGATGCCTTCCATTTTC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 28828 145 + 38599 CCCATCTCAATTAACCAGCTTCACCACCCCGCCCCCACTCTTTCCTCGGGGAGAGGTTGCAACCTCAGTTACCACTCACAATATTTCAGCCCAGACCCTGACATAATCACAGTGAAAGACCCGGCCTGAGATGCCCTCCATTTTC
- i calJac1.Contig13114 C 0 I 1045
- a score=25495.0
- s ponAbe2.chr22 13848912 35 + 46535552 ggcgaaaacc--atctctactacaaattcaaaaatta
- s panTro2.chr22 16145618 35 + 50165558 ggtgaaaccc--gtctctactaaaaattcaaaaatta
- i panTro2.chr22 C 0 I 12
- s hg18.chr22 16128828 35 + 49691432 ggtgaaaccc--gtctctactaaaaattcaaaaatta
- i hg18.chr22 C 0 C 0
- s rheMac2.chr10 61930489 36 + 94855758 ggtgaaaccct-gtctctactacagattcaaaaatta
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30018 37 + 38599 ggtgaaaccctcatccctactaaaaattcaaaaatta
- i calJac1.Contig13114 I 1045 C 0
- a score=136355.0
- s ponAbe2.chr22 13848947 177 + 46535552 gccagttgtgttgttgggcgcctatagtcccagatactcaggagcctgaggtacaagaatcgcttggacccggaaggcagaggctgcagtgagctgagatcaaaccattgcactccagcctgggtgtcagagcg--------agact-tatc----------------acaaacaaacaaaagaaTCACACCAGCCTAGAGC
- s hg18.chr22 16128863 184 + 49691432 gccagttgtgttgttgggcgcctatagtcccag-tactcaggagcctgaggcacaagaatcgcttggacccggaaggcagaggctgcagtgagctgagatcaaaccattgcattccagcctgggcgtcagagcg--------agact-TATCTcaaaca--------aacaaacaaacaaaAGAATCACACCAGCCTAGAGC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16145665 184 + 50165558 gccagttgtgttgttgggcgcctatagtcccag-tactcaggagcctgaggcacaagaatcgcttggacccggaaggcagaggccgcagtgagctgagatcaaaccattgcattccagcctgggcgtcagagtg--------agact-tatctcaaata--------aacatacaaacaaaagaaTCACACCAGCCTAGAGT
- i panTro2.chr22 I 12 C 0
- s rheMac2.chr10 61930525 201 + 94855758 cccagttgtattgttgggcgcctgtagtcccagctactcaggagcctgaggcacaagaatcccttggacctggaagacagaggctgcagcgagctgagatcaaaccattgcactccagcctgggcgtcagagcgTCAGAGCCAGACT-TATCTcaaacaaacaaacgaacaaacaaacaaaAGAATCACACCAGCCTAGAGC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30055 176 + 38599 gccggatgtgctgttgggtgcctgtagtcccagctactcgggagcctgaggcacaagaattgcttgaaccaggaaggcagaggctgcagtgagctgagatcacgccattgtactccagcctgggtgtcagagtg--------agactctgtctcaaaga------------------aaagagaaTCACACCAGCCTAGAGC
- i calJac1.Contig13114 C 0 C 0
- a score=98617.0
- s ponAbe2.chr22 13850776 127 + 46535552 AGCCACAGCACTGGGTGGATCATCGCCCTGGAGAGGGGATCGTGAGGGCTTAGAGTCACAGTGTCATCCAAGAAGGACTTGTCAGCCTCTGCAGAGGCTGCCTCTCACCTGCGGAACACGTACCCAC
- s calJac1.Contig13114 30231 119 + 38599 AGCCGCGTCACTGGGTAGATCATGGCTCTGGAGAGGGGACCGCGAGGGCTCAGAGTCACAGTGTCATCTGAGAGGGACTG-------TCTGCAGAGGCTGCCTCTCACCCG-GGAGCACACACGCAC
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61930750 125 + 94855758 AGCCACAGCGCTGGGTGGATCATCGCCCTGGAGAGGGGATTGTGAGGGCTTAGAGTCACAGTGTCATCCAAGAAGGACTTGTCAGCCCCTGCAGAGGCT--CTCTCACCTGCGGAATACGTGCCCTC
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16145873 125 + 50165558 AGCCACAGCACCGGGTGGATCATCGCCCTGGAGAGGGGAATATGAGGGCT--GAGTCACAGTGTCATCCAAAAAGGACTTGTCAGCCTCTGCAGAGGCTGCCTCTCACCTGTGGAACACATACGCAC
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16129071 125 + 49691432 AGCCACAGCACCAGGTGGATCATCGCCCTGGAGAGGGGAATATGAGGGCT--GAGTCACAGTGTCATCCAAAAAGGACTTGTCAGCCTCTGCAGAGGCTGCCTCTCACCTGCGGAACACGTACCCAC
- i hg18.chr22 C 0 C 0
- a score=108740.0
- s ponAbe2.chr22 13850903 149 + 46535552 TGTGCTTTAAGTCCTGGAGCGATTTGGTTCAGCCTTCTCAGGTGTATGGTTTTACGCCTTGGCTTTTCCATTGTGTCCACATTTTCTCAGAAAATGCAAATTTCTTGAGAAGTGACCTCA-TTCCCTCACCTGCAGC-AGACAAAGGTAAT
- s hg18.chr22 16129196 151 + 49691432 TGTGCTGTAAGTCCTGGAGCAATTTGCTTCAGCCTTCTCAGGTGTATGGTTTTATGCCTTGGCTTTTCCATTGTGTCCACATTTTCTCAGAAAATGCAAACTTCTTGAGAAGTGACCTCATTTCCCTCACCTGCAGCAAGACAAACGTAAT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16145998 151 + 50165558 TGTGATTTAAGTCCTGGAGCAATTTGCTTCAGCCTTCTCAGGTGTATGGTTTTATGCCTTGGCTTTTCCATTGTATCCACATTTTCTCAGAAAATGCAAACTTCTTGAGAAGTGACCTCATTTCCCTCACCTGCAGCAAGACAAACGTAAT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61930875 150 + 94855758 TGTGCTTTAAGTCCTGGAGCGATTTGGTTCAGCCTCCTCCGGTGTGTGGTTTTGTG-CTGGGCTTTTCCATTGTGTCCACGTTTTCTCAGAAAATGCAAGTTTCTTGAGAAGTGACCTCATTTCCCTCACCTGCAGCAAGACAAAGGTGAT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30350 151 + 38599 CGTGCTACAGGTCCTGCAGGGATTCGGTCCAGCCTTCACAGGTGTATGGTTTTATGCCTTGGCTCTTCCGTTGTGTCCATGTTTTCTCAGAAAATGCAAATTTCTTGAGAAGTGACTTCTTCTCCCTCACCTGAAGCAAGATAAAGGTGAT
- i calJac1.Contig13114 C 0 C 0
- a score=40981.0
- s ponAbe2.chr22 13851052 55 + 46535552 TCTTGGCACTCAGATATCCAATAGTGCTTTGATTTTAAATTTTCTA------TGTAACTTT
- s hg18.chr22 16129347 61 + 49691432 TCTTGGCACTCAGATATGCAATAGTGCTGTGATTTTAACTTTTCTATGTAACTGTAACTTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16146149 61 + 50165558 TCTTGGCACTCAGATATGCAATAGTGCTGTGATTTTAACTTTTCTATGTAACTGTAACTTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61931025 55 + 94855758 TCTTGGCCCTCGGATATCCGATAGTGCTGTGATTTTAAATTTTCTA------TGTAACTTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30501 55 + 38599 TCTCAGCACTCAGATATCCAATAGTGCTGTGATTTTAAATTTTCTA------GATAACTTT
- i calJac1.Contig13114 C 0 C 0
- a score=104274.0
- s ponAbe2.chr22 13851107 132 + 46535552 GAAAAGTACTCTCCCATTCCACCAAGCaaaaaaaaaaaaaaaaaaaaaaaaaGCCCTAGGGCAGGGGTGGAGGGATTGGGGCGTAAGGGGAAC--------CTCCAATTCCATCCAGAGGAGGGCACTAGTCCATCTGCT
- s hg18.chr22 16129408 129 + 49691432 GAAAAGTACTCTCCCATTCCACCAAGCAAAAAAAG---AAAAAAAAAAAAAAGCCCCAGGGCAGGGGTGGAGGGATTGGGGCGTAAGGGGAAC--------CTCCAATTCCATCCAGAGGAGGGCACTAGTCCATCTGCT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16146210 126 + 50165558 GAAAAGTACTCTCCCATTCCACCAAGCAAAAAAAG------AAAAAAAAAAAGCCTTAGGGCAGGGGTGGAGGGATTGGGGCATAAGGGGAAC--------CTCCAATTCCATCCAGAGGAGGGCACTAGTCCATCTGCT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61931080 117 + 94855758 GAAAAGTGCCCTCCCATTCCACCAAACAAACAAAA---------------AAGCCCCAGGGCAGGGGTGGAAGGATTGGGGCGCCAGGGGAAC--------CTCCAATTCCATCCAGAAGAGGGCACTAGTCCGTCTACT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30556 130 + 38599 GAAAAGTGCTCTCCCATTCTACCAAGCaaaaaaaaaaaacaaaaaaaaaaaCGCCCCAGGGCAGGGGTGGAGGGATT---------AGGGAACCTCCAATTCTCCAATTCCAACCAGA-GAGGGCACTAGTCCATCTACC
- i calJac1.Contig13114 C 0 C 0
- a score=129434.0
- s ponAbe2.chr22 13851239 166 + 46535552 CAGGCCCTCCCCACATCGAGGTGCTCCTAGGTCCCCAAGAAAATCTCTTGATCCACCCAAAGAATCCCAAACTACTGACCATTGGTTTCCAAGGTCCATGAGTCATGACACTCTTAGACTTACTTAGCTGGTAAGATGCTTCTTATTTGAAAAACACAAAATCAAG
- s hg18.chr22 16129537 166 + 49691432 CAGGCCCTCCACACATCGAGGTGCTCCTAGGTCCCCAAGAAAATCTCTTGATCCACCCAAAGAATCCCAAACTACTGACCATTGGTTTCCAAGGTCCATGAGTCATGACACTCTTAGACTTACTTAGCTGGTAAGATGCTTCTCATTTGAAAAACACAAAATCAAG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16146336 166 + 50165558 CAGGCCCTCCCCACATCGAGGTGCTCCTAGGTCCCCAAGAAAATCTCTTGATCCACCCAAAGAATCCCAAACTACTGACCATTGGTTTCCAAGGTCCCTGAGTCATGACACTCTTAGACTTACTTAGCTGGTAAGATGCTTCTCATTTGAAAAACACAAAATCAAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61931197 166 + 94855758 CAGGCCCTCCCCACATCGAGGTGCTCCCAGGTGCACAAGAAAATCTCTTGATCCACCCAAAGAATCCCAAACTACTGACCATTGGTTTCCAAGGTCCATGAGTCGCGACACTCTTAGACTTACTTAGCCAGTAAGATGCTTCTCATTTGAAAAACATAAAATCAAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 30686 162 + 38599 CAGGCCCTCCCCACATGGAGGTGCTCCCAGGTCCCCAAGAAAATCTCTTGATCCACTCAAAGAATCCCAAAGTACTGACCATTGGTTTTCAAGGTCCCAAAGTCATGACACTCTTAG----CCTTAGCTGGAAAGGTGCTTCTCATTTGAGAAACATAAAATCagc
- i calJac1.Contig13114 C 0 I 623
- a score=166599.0
- s ponAbe2.chr22 13851405 199 + 46535552 AAAGCTC---CTGGCTGAGCAGCTAGAGGCATAAGAAACCTTGGAATCCTAAACCATCAGGGTCTCTGGCTTTGTCAGTCTCTG-TTGGGATCCGAGATAAGTGAAGTCAGGGGtaaagaaaataaatcagcagcttcccagggtgctggaaaggctgtcaggtagaacttccttccatgtggctccagggagcagaacttgg
- s calJac1.Contig13114 31471 203 + 38599 AAAGCTCTAGCTGGCTGAGCAGCTAGAGGCATAAGAAACCTTGGAATCCTAAACCTTCAGGGTATCTGGCTTTGTTAGTCTCTGCTTGGGATCGGAGATAAGGGAAATCAGGGATAAAGAAACCAAATCGGCAGCTTCCCAGGGTGCTGgaaagactgtcagacagaacttccttccgtgtggttccagggagcagaactcgg
- i calJac1.Contig13114 I 623 C 0
- s rheMac2.chr10 61931363 200 + 94855758 AAAGCCC---CTGGCTGAGCAGCCGGAGGCATAAGAAACCTTGGAATCCTAAACCATCGGGGTCTCTGGCTTTGTCAGTCTCTGCTTGGGATccgagataagtgaagtcaggggtaaagaaaataaatcagcagcttcccagggtgctggaaaggctgtcaggcagaacttccttccgtgtggctccagggagcagaacttgg
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16146502 199 + 50165558 AAAGCTC---CTGGCTGAGCAGCTAGAGGCATAAGAAACCTTGGGATCCTAAACCATCAGGGTCTCTGGCTTTGTCAGTCTCTG-TTGGGATccgagataagtgaagtcaggggtaaagaaaataaatcggcagcttcccagggtgctggaaaggctgtcaggcagaacttccttccatgtggctccagggagcagaacttgg
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16129703 199 + 49691432 AAAGCTC---CTGGCTGAGCAGCTAGAGGCATAAGAAACCTTGGAATCCTAAACCATCAGGGTCTCTGGCTTTGTCAGTCTCTG-TTGGGATcctagataagtgaagtcaggggtaaagaaaataaatcggcagcttcccagggtgctggaaaggctgtcaggcagaacttccttccatgtggctccagggagcagaacttgg
- i hg18.chr22 C 0 C 0
- a score=53032.0
- s ponAbe2.chr22 13851604 64 + 46535552 gtaaagcttcagaaaggccgctgtgggtttcacatgcagctgttcctaacccctggggctgtcA
- s hg18.chr22 16129902 64 + 49691432 gtaaagcttcagaaaggccgctgtgggcttcacatgcagctgttcctaacccctggggctgtcA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16146701 64 + 50165558 gtaaagcttcagaaaggccgctgtgggcttcacatgcagctgttcctaacccctggggctgtcA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61931563 64 + 94855758 gtaaagcttcagaaaggccgccgtggatttcacaggcagctcttcctgagccctggggctgtca
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 31674 63 + 38599 gtaaagcttcaggaaggctgctgtgggcttcacaggcagctgtt-ctaacccctggggctgtca
- i calJac1.Contig13114 C 0 C 0
- a score=147383.0
- s ponAbe2.chr22 13851668 199 + 46535552 GGAAT----TCTGTCTTGCTAAGGAAGGAAGGCCAGGCAGTGCAGGTGGAGGTGGGGGTTCTGGGGAGGTGGGTGCTGGGGG-ACTGTGCACCGAGGAAGATGTGGGGCCTTCAGGGTCACACCTCCCACCCCCAGAATTCTACAGACAAAGATGCTGTGATGTATAACTAGGAAGGGTGAAGGTGAGGGGACAGCCACTGAAA
- s calJac1.Contig13114 31737 194 + 38599 gaaacgcagtctgtcttgcgaagGAAGGCAGGCCAGGCAGTGCAGGTGCACGTGGGGGATCCGGGGAGGCAGGAGCTGGAGGCGCTGTGCACTGAGGAATACGTGGGGCCTTCAGAGTCACACCTCCCACCC----------GCAGACGAAGATGCTGTGACGCGTAACTAGGAAGGGTGAGGGTGGGAGGACAGCCACTGAAA
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61931627 198 + 94855758 -gaaC----TCTGTCTTGCTAAGGAAGGAAGGCCAGGCAGTGCAGGTGCAGGTAGGGGTTCTGGGGAGGTGGGTGCTGGGGG-GCTGTACACCGAGGAAGATGTGGGGCCTTCAGGATCACACTTCCCACCCCCAGAATTCTACAGACGAAGATGCTGTGATGTATAACTGGGAAGGGTGAAGGTGGGGGGACAGCCACTGAAA
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16146765 199 + 50165558 GGAAT----TCTGTCTTGCTAAGGAAGGAAGGCCAGGCAGTGCAGGTGCAGGTGGGGGTTCTGGGGAGGTGGGTGCTGGGGG-ACTGTGCACCGAGGAAGATGTGGGGCCTTCAGGGTCACACCTCCCACCCCCAGAATTCTACAGACGAAGATGCTGTGATGTATAACTAGGAAAGGTGAAGGTGGGGGGACAGCCACTGAAA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16129966 199 + 49691432 GGAAT----TCTGTCTTGCTAAGGAAGGAAGGCCAGGCAGTGCAGGTGCAGGTGGGGGTTCTGGGGAGGTGGGTGCTGGGGG-ACTGTGCACCGAGGAAGATGTGGGGCCCTCAGGGTCACACCTCCCACCCCCAGAATTCTACAGACAAAGATGCTGTGATGTATAACTAGGAAAGGTGAAGGTGGGGGGACAGCCACTGAAA
- i hg18.chr22 C 0 C 0
- a score=194215.0
- s ponAbe2.chr22 13851867 224 + 46535552 CAGAGCCAGGATTGTGAGCTCTAACCCAGGGGTTTTCCTCTCAACACCATCTGGGGCACGCTTTTAGAGCATCTCCCCACTCCATTCACTCTACACCCTCCTTTCCACCCACTGGGAGGCTCCATCTTCCTCAGCTGACTCCCACACAGAGGCAGAAGAGGGAGAAGCCGCCTCCACCCTGAGGAGCTTGGGGGCAAACATCTGCTCCCTGCCATTGTTTCCCC
- s hg18.chr22 16130165 223 + 49691432 CAGAGCCAGGATGTTGAGCTCTAACCCAGGGATTTTCCTCTCAACACCATCTGGGGCACGCTTTTAGAGCATCTCCCCTCCCCATTCACTCTACA-CCTCCTTTCCACCCACCGGGAGGCTCCATCTTCCTCAGTTGACTCCCACACAGAGGCAGAAGAAGGAGAAGCTGCCTCCACCCTGAGGAGCTTGGGGGCAAACATCTGCTCCCTACCATTGTTTCCCC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16146964 210 + 50165558 CAGAGCCAGGATGGTGAGCTCTAACCCAGGGATTTTCCTCTCAACACCATCTGGGGCA--------------CTCCCCTCCCCATTCACTCTACACCCTCCTTTCCACCCACCGGGAGGCTCCATCTTCCTCAGTTGACTCCCACACAGAGGCAGAAGAAGGAGAAGCTGCCTCCACCCTGAGGAGCTTGGGGGCAAACATCTGCTCCCTGCCATTGTTTCCCC
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61931825 224 + 94855758 CGGAGCCAGGACAGTGAGCTCTAACCCAAGGGTTTTCCTCTCAACACCGTCTGGGGCATGCTTTTAGACCATCTCCCCTCTCCATTCACTCTACACCCTCCTTTCCACCCACTGGGAGGCTTCGTCTTCCTCGGTCGACTCCCACACAGAGGCAGAAGAGGGAGAAGCCGCCTCCACCCCGAGGAGCTTGGGGGCAAACATCTGCTCCCTGCCATTGTTTCCCC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 31931 222 + 38599 CAGAGCCAGGACCGCCAGCTCTAAGCCAGGGCCTTTCCTCTCAGCATCATC-AGGGCACGCTTTAAGGGCAGCT-CCCTCTCCATTCACTCTACAACCACCTTTACACCCACTGGGAGGCATCAGCTTCTAGGGTTGACCCCCACACAGAGGCAGAAGTGGGAGATGCCGCCTCCACCCTGAGGAACGTGGGGACAAACATCTGCTCCCTGCCATTGTCTCCTC
- i calJac1.Contig13114 C 0 C 0
- a score=232012.0
- s ponAbe2.chr22 13852091 334 + 46535552 TTATTTAGTGGGTGGGAAGGACCTGGCAGAGCTCTTCAGCCAAATCACACACCCAGGCGACAGTTTGGTGAACCCTCCTCCAGGGGAACCGGGGAAAGCTGAAAATGCCTGTTGGCCTAACAGGGGTTTTCAGAGTGTCACTCCCATGCTGTGTGGGTGGGGCGGAGAGGTGACATTCACCCTCCTTGGCAGCACCCGTTGTGTCCCTCGTGTGTTCTCCGGCTGCAGAGCCCAGTGAGGCTATGCGGTGACGGATACAGTCACTTGTGCCTCTCTCTCCCTTCTGCTCCCCACCGCCCC-ATGCCACTTCTACCCACTCAGGCTTGCAGCAGA-G
- s hg18.chr22 16130388 332 + 49691432 TTATTTAGTGGGTGGGAAGGACCTGGCAGAGCTCTTCAGCCAAATCACACACCCAGGTGGCAGTTTGGTGAACCCTCCTCCAGGGTAACTGGGGAAAGCTGAAAATGCCTGTTGGCCTGACAGGGGTTTTCAGAGTGTCACTCCCATGCTGAGTGGGTGGGGCGGAGAGGTGACATTCACCCTCCTCGGCAGCACCCCTTATGTCCCTCGTGTGTTCTCCGGCTGCAGAGCCCAGTGAGGCTATGCAGTGACAGAT--AGTCACTTGTGCCTCTCTCTCCCTTCTGCTCCCCCCCGCCCC--TGCCACTTCTACCCACCCAGGCTTGCAGCAGAGG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16147174 333 + 50165558 TTATTTAGTGGGTGGGAAGGACCTGGCAGAGCTCTTCAGCCAAATCACACACCCAGGTGGCAGTTTGGTGAACCCTCCTCCAGGGTAACTGGGGAAAGCTGAAAATGCCTGTTGGCCTGACAGGGGTTTTCAGAGTGTCACTCCCATGCTGTGTGGGTGGGGCGGAGAGGTGACATTCACCCTCCTCGGCAGCACCCCTTATGTCCCTCGTGTGTTCTCCGGCTGCAGAGCCCAGTGAGGCTATGCAGTGACAGAT--AGTCACTTGTGCCTCTCTCTCCCTTCTGCTCCCCCCCGCCCC-ATGCCACTTCTACCCACCCAGGCTTGCAGCAGAGG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61932049 310 + 94855758 TTATTTAGTGGGTGGGAGGG-----------------------ATCACACACCCAGGCGACAGTTTGGTGAACCCTCCTCCAGGGTAACTGGGGAAAGCTGAAAATGCCTTTTGGCCTGCGAGGGGTTTTCAGAGTGTCACTCCCATGCTGCGTGGGTGGGGCGGAGAGGTGACATTCACCCTCCTTGGCAGCACCTCTTGTGTCGCTCCTGTGTTCTCCGGCTGCGGAGCCCTGCGAGGCTGTG--GTGACGGATACAGTCACTTGTGCCTCTCCCTCCCCTCGGGACCCCCCCCCCCCCGTGCCACTTCTACCCACCCAGTCTTGCAGGAGAG-
- i rheMac2.chr10 C 0 I 1229
- s calJac1.Contig13114 32153 329 + 38599 TTATTTGGTGGGTGGGAGGGACCTGGTGGAGCTCTTCAGCCAAATAACACACACAAGCGGCA-CCTGGTAAACCCTCCTCCAGGGTAACTGGGGAAAGCTGAACACGCCCGGTGGCCTGAGAGGGGTTTTCAGAATGTCACTTTAATGCTGTGTGGGTGGGGCAGAGAGGTGACATTTCCCCTTCTTGGCAGCACCCCTCTTGTCCCTCGTGTATTCTCTGGCTGCGGAGCCCGATGACGCTATGTGGGGACAGATACAGTCACGGGTGCCTCTCCCTCCCCTATGGGC----CTGCCCTGGTGCCACTTCTAACCAC-CAGGTTTGCAGCAGAG-
- i calJac1.Contig13114 C 0 I 1
- a score=205167.0
- s ponAbe2.chr22 13852425 382 + 46535552 GCCTGGAGTCTTGGGTGTGGGCGGGTGTTTATCTCATCAGACAACTAAA---------------------------G-TTTGCCAGGGCTGGGCTGCGGGTTCACAAATTCACTTGCTGACCTGCTTAGGAAACACAGGGCAGGGTTTTGTTCCAGTGCCTTCCTGGCAGCCACACCCACTTAACACCAAGTTCCAAATGCC----AGGTCTGAGACAGAGGGGATCGCAGTG----GAGATTG----CACTCGCTTCAGCA-TTTA-----CCAGCTCTGGT---------AATATCTGTTGAGCAACTGCTCCATGGCA-GGGCTGGGGAT----GTGACCCGTGAACAAATTGGCCAGGGCAGG-TCCCTGCTCGGACCT-----GTGGTGCTTGCAGTCA-----------------------CCGTCTGGGGAAGGACTGCAAAACCACACAGACAGTATGACAGA
- s hg18.chr22 16130720 383 + 49691432 GCCTGGAGTCTTGGGTGTGGGCAGGTGTTTATCTCATCAGACAACTAAA---------------------------GTTTTGCCAGGGCTGGGCTGCGGGTTCACGCATTCACCTGCTGACCTGCTTAGGAAACACAGGGCAGGGTTTTGTTCCAGTGCCTTCCTGGCAGCCACACCCACTTAACACCAAATTCCCAATGCC----AGGTCTGAGACAGAGGGGATCGCAGTG----GAGACTG----CACTCGCTTCAGCA-GTTA-----CCAGCTCTGGT---------AATATCTGTTGAGCAACTGCTCCATGGCA-GGGCTGGGGAG----GTGGCCCGTGAACAAATTGGCCAGGGCAGG-TCCCTGCTCCGACCT-----GTGGTGCTTGCAGTCA-----------------------CCGTCTGGGGAGGGACTGCAAAACCACACAGACAGTACGACAGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16147507 382 + 50165558 GCCTGGAGTCTTGGGTGTGGGCAGGTGTTTATCTCATCAGACAACTAAA---------------------------GTTTTGCCAGGGCTGGGCTGTGGGTTCACGCATTCACCTGCTGACCTGCTTAGGAAACACAGGGCAGGGTTTTGTTCCAGTGCCTTCCTGGCAGCCACACCCACTTAACGCCAAGTTCCCAATGCC----ACGTCTGAGACAGAGGGGATCGCAGTG----GAGACTG----CACTCGCTTCAGCA-GTTA-----CCAGCTCTGGT---------AATATCTGTTGAGCAACTGCTCCATGGCA-GGGCTGGGGAG----GTGGCCCGTGAACAAATTGGCCAGGGCAGG-TCCCTGCTCCGACCT-----GTGGTGCTTGCAGTCA-----------------------CCGTCTGGGGA-GGACTGGAAAACCACACAGACAGTACGACAGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61933588 383 + 94855758 ACCTGGAGTCTTGGGTGTGGGCGGGTGTTTATCTCATCAGACAACTAAA---------------------------GTTGTGCCGGGGCTGGGCTGCGGGTTCACGCATTCACCTGCTGATCTGCTTAGGAAACACAGGGCAGGGTTTTGTTCCAGTGCCTTCCTGGCAGCTGCACCCACTTAACACCAAGTTCCAAATGCC----AGGTCTGAGACAGAGGGGATCGCCGTG----GAGACCG----CACTCGCTTCAGCA-GTTA-----CCAGCTCTGGT---------CATATCTGTTGAGCAACCGCTCCGTGGCG-GGGCTGGGGAT----GCCACCCGGGAACAAACTGGCCGGTGCAGG-TCCCTGCTCGGACCT-----GGGGTGCTTGCAGTCA-----------------------CAGTCTGGGGAGGGGCTGCAAACCCACACAGACAGCATGACAGA
- i rheMac2.chr10 I 1229 C 0
- s calJac1.Contig13114 32483 436 + 38599 GCCTGGATTCTTGGGTGTGGGTGGGCGTTTATCTCATCAGACAACTAAAAACCAGGCGGAGGGGACTGAATCACACGTCTTGCTGGGACTGGGATGCGGGTTCATGCGTTCACCTGCTGCCCTGCTTA-AAAACACAGGGCGGG-------------------CTgccgggcgcagtggctcaagcctgtaatcccagcactttgggaggctgaggc-gggtggatcacgaggtcaagagatcgagaccatcctggtcaacatggtaaaaccccgtctctactaaaaatacaaaaattagctgggca------cggtggcgcgtgcctgtaatcccagctactcagga-------ggccgaggcaggagacttacctgaacccaggaggaggagattgcggtgagccgagattgcgccatagcactccagcctgggtaacaagagcaaaactacgtc-acaaaaaaacaaa
- i calJac1.Contig13114 I 1 I 47
- a score=367208.0
- s ponAbe2.chr22 13853665 718 + 46535552 ttggccaggctggtcttgaactcctgacctc--gtgatccatccgcctcagcctcccaaagtgctgggattacaggcatgagc--caccgtgcctggccTAAAATTT--CTTTTAACTGAATAATTTATCTTCCATTAGTATATGTGCTTCTCTCTGTGtttgtttttcgtt--tttggttttttgt-ttttttgagacggaatctcgctctgtcgcctagcctg-gagtgcagtggcgccatctcagctcactgcaagctccgcctcctgggtttacaccattctcctgtctcagcctcctgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgtatttttttttagtagagacagggtttcactgtgttagccaggatgatctcga--tctcctgacctt--gtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcc-cggcGCTCTCTTTG------tttttat---tttatttttattatttattattatt--ttta-----------tttatttattta--tttttgagacagagtttcgttcttgttgcccaagctggagtgcaatgggcgctatctcagcccactgcaaactctgcctcctgcattcaagctattctcctgcctcagcctccgcagcagctgggattacaggcatgcaccaccatgcctggcta---------a-ctttgcagttttagtagagacgggatttctccatg
- s hg18.chr22 16131964 701 + 49691432 ttggccaggctggtcttgaactcctgacctc--gtgatccacccacctcagcctcccaaagtgctgggattgcaggcatgagc--tactgcacctggccTAGAATTT--CTTTTAACTGAATAATTTATCTTCCATTAATACATGTGCTTCTATCCTTGTTTGtttttcgtt--tttgtttttttgt-ttttttgagacagaatctcgctctgtcgcctagcctg-gagtgcagtggcgccatctcggctcactgcaagctccgcctcccgggtttacaccattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgta-ttttttttagtagagacagggtttcactgtgttagccaggatggtctcaa--tctcctgacctc--gtgatccacccctctcggcctccgaaagtgctgggattacaggcgtgagccactgcgcc-cggccCTCTCTTTG------TTTTTA------------------TTtttattatt--ttta-----------tttatttattta--tttttgagacagagtttcgttcttgtcgcccaagctggagcgcaat-ggcgctctctcagcccactgcaacctctgcctccctcattcaagctattctcctgcctcagcctccagagcagctgggattacaggcatgcacgaccatgcctggcta---------a-ttttgcagttttagtagagatggggtttctccatg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16148745 711 + 50165558 ttggccaggctggtcttgaactcctgacctc--gtgatccacccacctcagcctcccaaagtgctgggattgcaggcatgagc--tactgcacctggccTAGAATTT--CTTTTAACTGAATAATTTATCTTCCATTAATATATGTGCTTCTATCTTTGtttgtttttcgtt--tttggttttttgt-ttttttgagacagaatctcgctctgtcgcctagcctg-gagtgcagtggcgccatctcggctcactgcaagctccgcctcccgggtttacaccattctcctgcctcagcctcctgagtagctgggactacaggtgcccacgaccacgcccggctagttttttgta-ttttttttagtagagacagggtttcactgtgttagccaggatggtctcaa--tctcctgacctc--gtgatccacccctctcggcctccgaaagtgctgggattataggcgtgagccactgcgcc-cggccCTCTCTTTG------TTTTTA--------tttttattattttttattatt--ttta-----------tttatttattta--tttttgagacagagtttcgttcttgtcgcccaagctggagcgcaat-ggcgctatctcagcccactgcaacctctgcctccctcattcaagctattctcctgcctcagcctccagagcagctgggattacaggcatgcaccaccatgcctggcta---------a-ttttgcagttttagtagagatggggtttctccatg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61935354 726 + 94855758 ttggtcaggctggtctcgaactctcaatctcaggtgatccgtctgcctctgcctcccaaagtgctggg-ttacaggcatggac--catcgtgcctggcCTCTCTCTTTGTTTTTAACTCCTTCATGGTTTTAC--TTAGTCTGGATGTCACAATTCAt-----ttatttgtt--tatg----------tttttagagtcagggtcttgctctgttgtccaagctg-gagtgcagtggtgtgatcatggctcactgcagccttgacctcccaggctcaagaaatcctcctgcctcagcctcctaagtggctgggactacaggcatgcaccaccatggt--accaaatttt-----acgtttttggtagagatggggccttgttgctttgcccaggctggtctcaaaccctcaggctcta--gctattctccgaccttgacctcccaaagt--tgcaattacagTTCTTATCCACCAAGATGTGATGATTTATTTAATGAATTCCTTATTGATTGATTTTTTTTTTTGATTGATATT--TTGGGTCCTCCTCACCttttttttttt--tttttgagacggagtctcgctc-tgtcgcccaggctggagtgcagt-ggccagatttcagctcactgcaagctccgcctcccgggtttatgccatcctcctgcctcagcctcccaggtagctgggactacagacgcccgccaccttgcccggctagttttttgta-tttttttgttttagtagagacggggtttcaccatg
- i rheMac2.chr10 I 674 N 0
- s calJac1.Contig13114 33032 705 + 38599 ttggccaggctagtctcgaactcctgacctcaggtgatccgcctgcctcggccccccaaagt-------------gcATGAGCCACACTGCACCCGGCGT----CTG--TTTTTAACTGCTTCAT-GGTTTAC--TTGGTCTGGATGTCATAATTAAT-----TAAtttgtttgtttgtttatttatatttttagagtcagggtctcactccgttgcccgggctgtgagtgcagtggtgtgatcatggttcactgcagcctcgacctcctgggctcaagagatcctcctgcctcagcttcctgagtggctgggactataggcatgtgccaccatgcc--agcacatttt-----atgtttttggtagagatgaggccttgttgctttgcccaggctggtctcga--actcccagcctcaagctagtcttccactttgacctcc-aaagt--TGCAATTACGGTTCTTACCCGCCTAGATGTGATGATTTAGTTAATGATTTCCTTATTGATAGATATTTTGGGTCCCCCtttatttattta-----------tttatttatttattttttttagatggagtcttgctc-tgttg-ccaggctggagtgcaat-ggcacagtttcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacagacacacgccaccacacccagcta---------atttttgtatttttagtagagacggggttacaccatg
- i calJac1.Contig13114 C 0 C 0
- a score=298890.0
- s ponAbe2.chr22 13854383 461 + 46535552 ttggtcaggctggtctcgaactctcaatctcaggtgatccgcctgcctctgcctcccaaagtgttggggttacaggcgtgagccactgtgcctggccTCTCTCTTTGTTTTTAACTGCTTCATTGTTTTACTTAGTCTGGATGTCATAATTTAtttacttgtttgtttgtttatgtttttagagtcagggtcttgctctgttgtccaagctggagtgcagtggtgtgatcatggctcactgcagcctcgacctcccaggctcaagagatcctcctgcctcagcctcctaagtggctgggactacaggcatgcaccaccatgcc--accaaattttatgt-ttttggtagacatggggccttgctgctttgcccaggctggtctcaaaccctcagcctcaagctattctcacaccttagcctcccaaagt--tgcaattacagTTCTTATCCACCAGGATGTGATGA
- s calJac1.Contig13114 33737 413 + 38599 ttggccaggatggtcttaatctcttgacctcc--tgatctgcccacctcagcttcccaaagtgatgggattacaggcatgagctaccttgccaggACCCtt-----------------------------------------------atttatttatttgtttgtttatttatttTCtt-gagatggagtttcattctgtca-ccaggctggagtacagtggcacaatctcggcttactgcaacctccaccccctgggttcaaacagttcccctgcctcagccccctgagtagctgggactacaaatgagctccaccacacccggctagtttttttgtattttaatagagacagagctttaccatgttggccaggaagatcttaatctcctgacctcatg--atctgcctgcctcaacctcccaaagtgctgggatcacaggtataagccgccacATACAGAGGA
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61935354 452 + 94855758 ttggtcaggctggtctcgaactctcaatctcaggtgatccgtctgcctctgcctcccaaagtgct-gggttacaggcatggaccatcgtgcctggcCTCTCTCTTTGTTTTTAACTCCTTCATGGTTTTACTTAGTCTGGATGTCACAATTCAttta--------tttgtttatgtttttagagtcagggtcttgctctgttgtccaagctggagtgcagtggtgtgatcatggctcactgcagccttgacctcccaggctcaagaaatcctcctgcctcagcctcctaagtggctgggactacaggcatgcaccaccatggt--accaaattttacgt-ttttggtagagatggggccttgttgctttgcccaggctggtctcaaaccctcaggctctagctattctccgaccttgacctcccaaagt--tgcaattacagTTCTTATCCACCAAGATGTGATGA
- i rheMac2.chr10 N 0 C 0
- s panTro2.chr22 16149456 461 + 50165558 ttggtgaggctggtctcgaactcccaatctcaggtgatccacccgcctctgcctcccaaagtgttggggttacaggcgtgagccaccgtgcctggccTCTCTCTTTGTTTTTAACTGCTTCATTGTTTTACTTAGTCTGGATGTCATAATTTAtttacttgtttgtttgtttatgtttttagagtcagggtcttgctctgttgtccaagctggagtgcagtggtgtgatcatggctcactgcagcctcgacctcccaggctcaagagatcctcctgcctcagcctcctaagtggctgggactataggcatgcaccaccatgcc--accaaattttatgt-ttttggtagagatggggccttgctgctttgcccaggctggtctcaaaccttcaacctcaagctattctcccaccttggcctcccaaagt--tgcaattacagTTCTTATCCACCAGGATGTGATGA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16132665 459 + 49691432 ttggtgaggctggtctcgaactcccaatctcaggtgatccgcccgcctctgcctcccaaagtgttggggttacaggcgtgagccaccgtgcctggccTCTCTCTTTGTTTTTAACTGCTTCATTGTTTTACTTAGTCTGGATGTCATAATTTAtttacttgtttgtttgtttatgtttttagagtcagggtcttgctctgttgtccaagctggagtgcagtggtgtgatcatggctcactgcagcctcgacctcccaggctcaagagatcctcctgcctcagcctcctaagtggctgggactacaggcatgcaccaccatgcc--accaaattttatat-ttttggtagaga--gggccttgctgctttgcccaggctggtctcaaaccctcaacctcaagctattctcccaccttggcctcccaaagt--tgcaattacagTTCTTATCCACCAGGATGTGATGA
- i hg18.chr22 C 0 C 0
- a score=12907.0
- s ponAbe2.chr22 13854844 38 + 46535552 TTTATTTAATGATTTCCTTA-----------------TTGATAGATATTTTGGGT
- s hg18.chr22 16133124 38 + 49691432 TTTATTTAATGATTTCCTTA-----------------TTGATAGATATTTTGGGT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16149917 38 + 50165558 TTTATTTAATGATTTCCTTA-----------------TTGATAGATATTTTGGGT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61935806 55 + 94855758 TTTATTTAATGAATTCCTTATTGATTGATTTTTTTTTTTGATTGATATTTTGGGT
- i rheMac2.chr10 C 0 I 314
- s calJac1.Contig13114 34150 17 + 38599 CTGATTGACTGA-------------------------TTGAT-------------
- i calJac1.Contig13114 C 0 C 0
- a score=30291.0
- s ponAbe2.chr22 13854882 70 + 46535552 CCCCCTTACCTTTTATTTATTTCTCCTTTTTTTTTTTTTTTTTGTGCTATTTTACCTTGGGTGACTTTTT
- s calJac1.Contig13114 34167 26 + 38599 --------------------------------------------TGCTATTTTACCCTGGGTGACTTTTT
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61936175 65 + 94855758 CCTCCTCACCTTTTATTTATTTCTCTT-----TGTGTGTGTGTGTGCTATTTTACCTTGGGTGACTTTTT
- i rheMac2.chr10 I 314 C 0
- s panTro2.chr22 16149955 68 + 50165558 CCCCCTTACCTTTTATTTATTTCTCTC--TCTTTTTTTTTTTTGTGCTATTTTACCTAGGGTGACTTTTT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16133162 64 + 49691432 CCCCCTTACCTTTTATTTATTTCTCTC------TTTTTTTTGTGTGCTATTTTACCTAGGGTTACTTTTT
- i hg18.chr22 C 0 C 0
- a score=30818.0
- s ponAbe2.chr22 13854952 45 + 46535552 AATAAGGTGAACTTAAGGTGGGTTGGAGTTCAGA------TTTTTTTTTTT
- s calJac1.Contig13114 34193 51 + 38599 AATGAGGTGAATTTAAGGTGGGTTGGATTTCAGATTACTATATTTTTTTGC
- i calJac1.Contig13114 C 0 C 0
- s rheMac2.chr10 61936240 50 + 94855758 AATAAGGTGAACTTAAGGTGGGCTGGATTTCAGATT-TTTTTTTTTTTTTT
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16150023 44 + 50165558 AATAAGGTGAACTTAAGGTGGGTTGGAGTTCAGA-------TTTTTTTTTT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16133226 47 + 49691432 AATAAGGTGAACTTAAGGTGGGTTGGAGTTCAGA----TTTTTTTTTTTTT
- i hg18.chr22 C 0 C 0
- a score=59308.0
- s ponAbe2.chr22 13854997 74 + 46535552 TTAGAAAACTTCCAACAGATAAAGATGAGGAACCCACTACTAATGATGTTGAATTTGTTTTTGTTTTTCTTGTA
- s hg18.chr22 16133273 74 + 49691432 TTAGAAAACTTACAACAGATAAAGATGAGGAACCCACCACTAACGATGTTGAATTTGTTTTTGTTTTTCTTGTA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16150067 74 + 50165558 TAAGAAAACTTTCAACAGATAAAGATGAGGAACCCACCACTAATGATGTTGAATTTGTTTTTGTTTTTCTTGTA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61936290 56 + 94855758 TTGGAAAACTTTCAACAGATAAAGATGAGGAACCCGCCACTGATAATGTTGAATTT------------------
- i rheMac2.chr10 C 0 I 379
- s calJac1.Contig13114 34244 74 + 38599 TTAGAAAACTTTCAGCAGAGAAAGATGAGGACCCCACCACGGATAACGCTGAATTTGTTCTTGTTTTTCTTGTA
- i calJac1.Contig13114 C 0 C 0
- a score=335723.0
- s ponAbe2.chr22 13855071 428 + 46535552 ATAAGTCCTATTTGGAACCTTGGCCCATTTGCTACTGGGCCAGCCCCCTCCTGCTAGGATGACCTTAGCCCCCTGGGCCAGCCCTGCTTCCCCAGTCCCCACCCACTGGTGCAGTGGTGATGAGACACCTCCCGCTGCTTCCTCTGAGCCCTCCTTCGACACTGATAGGCCGGGCTCACTCTTGCAGGGCTGGAATTTGCCAAGCTTGCCTCCCTCCCTCTGGGAATGAG----CACTCCCCACCCCTCCCC--CTTCATTTTCTCTGGAGCCTT-TGGGACAAACAACTCTCTAGGACGGAGCTACCTCCTAAGGGAGGCCCCTCTGGCCTCTTCCTTGGCATCTGTGACCACCTGCGTCTGCCACAGCTTCTCTGGTCCAGCCTGACCTGATGAGTCTATTTGTACTTCCTCACTGTCTTCTTTGAACCTTGA
- s calJac1.Contig13114 34318 421 + 38599 CTAAGTCCTATGTGGAACCTTGGCCCCTTTGCTACTGGGCCAGCCCCTTCCTGGTAGAGTGACCTTAGCCCCTTGGGCCAGCCCAACTGCCCCAGTTCCCACCCTCTGGTG-GCTAGTAATGAGGCACACCCCTGTGCTTCCCCTGAGGCCT---------CTGATAGGTTGGGCTCACCCTTGCAGGGCTGGAATCTGCCCAGCTTGCC-CCCTCCCTCGGGGAATGGGGCAACCCCCCCCACCCGTCCCCCTCTCTGTTTTCTCCGGAGCCCCATGAGACAAACAGCTAT-TGGGACGGAGCTGCCTCCTGGGGGAGGCCCTGC-AGCCTCTTTCCCGGTATCTGTG-CCTCCTGCATCTGCCGCAGCTTCTGTGGTCCAGCCTGACCTGATGTGTCTATTTGTACTTCCTCACTGTCTTCTTTGAATCTTGA
- i calJac1.Contig13114 C 0 I 444
- s rheMac2.chr10 61936725 430 + 94855758 ATAAGTCCTATTTGGAAACTTGGCCCATTTGCCACTGGGCCAGCGCCCTCCTGCTAGGATGACCTTACCCCCCTGGGCCAGCCCTGCTTCCCCAGTCACCACCCCCTGGTGCAGTGGTGATGAGACACCTCCCTCTGCTTCCTCTGAGCCCTCCTTCGACACTGATAGGCCGGGCTCACCCTTGCAGGGCTGGAAATCGCCAAGCTTGCCTCCCTCCCTCTGGGGATAAG----CACTCTCCACCCCTCCCCCTCTTCATTTTCTCTAGAGCTCT-TGGAACAAACAACTGTCTAGGATGGAGCTACCTCCTAAGGGAGGCCCCGCCGGCCTCTTCCCTGGCATCTGTGACCACCTGCGCCTGCCACAGCTTCTCTGGTCCAGCCTGACCTGATGCGTCTATTTGTACTTCCTCATTGTCTTCTTTGAACCTTGA
- i rheMac2.chr10 I 379 C 0
- s panTro2.chr22 16150141 428 + 50165558 ATAAGTCCTATTTGGAACCTTGGCCCATTTGCTACTGGGCCAGCCCCCTCCTGCTAGGATGACCTTAGCCCCCTGGGCCAGCCCTGCTTCCCCAGTCCCTACCCCCTGGTGCAGTGGTGATGAGACACCTCCCTCTGCTTCCTCTGAGCCCTCCTTCAACACTGATAGGCTGGGCTCATCCTTGCAGGGCTGGAATTTGCCAAGCTTGCCTCCCTCCCTCTGGGAATGAG----CACTCCCCACCCCTCCCC--CTTCATTTTCTCTGGAGCCTT-TGGGACAAACAACTCTCTAGGACGGAGCTACCTCCTAAGGGAGGCTCCTCTGGCCTCTTCCCTGGCATCTGTGACCACCTGCGTCTGCCACAGCTTCTCTGGTCCAGCCTGACCTGATGAGTCTATTTGTACTTCCTCACTGTCTTTTTTGAACCTTGA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16133347 428 + 49691432 ATAAGTCCTATTTGGAACCTTGGCCCATTTGCTACTGGGCCAGCCCCCTCCTGCTAGGATGACCTTAGCCCCCTGGGCCAGCCCTGCTTCCCCAGTCCCTACCCCCTGGTGCAGTGGTGATGAGACACCTCCCTCTGCTTCCTCTGAGCCCTCCTTCGACACTGATAGGCCGGGCTCACCCTTGCAGGGCTGGAATTTGCCAAGCTTGCCTCCCTCCCTCTGGGAATGAG----CACTCCCCACCCCTCCCC--CTTCATTTTCTCTGGAGCCTT-TGGGACAAACAACTCTCTAGGACGGAGCTACCTCCTAAGGGAGGCCCCTCTGGCCTCTTCCCTGGCATCTGTGACCACCTGCGTCTGCCACAGCTTCTCTGGTCCAGCCTGACCTGATGAGTCTATTTGTACTTCCTCACTGTCTTCTTTGAACCTTGA
- i hg18.chr22 C 0 C 0
- a score=67790.0
- s ponAbe2.chr22 13855499 79 + 46535552 TTTCTGAGGACGTTTCCAATCCCACCCCCAGCCAGAGTCCTTCC-------GTTCTCTCCTGATGTTTCTCCCCAGCTCAGGGCCT
- s calJac1.Contig13114 35183 72 + 38599 TTTTTAAGGAAGTTTCCAATCCCACCTCCAGCCAGAGCCCCTCCC------GACCT----TGAC----CTCCCCAACTCTGGGCCT
- i calJac1.Contig13114 I 444 C 0
- s rheMac2.chr10 61937155 86 + 94855758 TTTTTGAGGAAGTTTCCAATCCCACCCCCAGCCAGAGTCCCTCCTGTTCTCGCTCTCTCCTGACGTTTCTCCCCAGCTCAGGGCCT
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16150569 80 + 50165558 TTTCTGAGGAAGTTTCCAATCCCACCCCCAGCCAGAGTCCTTCCT------GTTCTCTCCTGATGTTTCTCCCCAGCTCGGGGCCT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16133775 80 + 49691432 TTTCTGAGGAAGTTTCCAATCCCACCCCCAGCCAGAGTCCTTCCT------GTTCTCTCATGATGTTTCTCCCCAGCTCAGGGCCT
- i hg18.chr22 C 0 C 0
- a score=453591.0
- s ponAbe2.chr22 13855578 447 + 46535552 TTTGTTTTCCACCCCAACCCTCCCTGCAGGTTTGTCCCACTTTGCCAGGAGCTCTCCAGCCCAGCAGCCTCTCCTCTTACTAATCTCTTTTCTAAACGCTGTCTTCTGTAGCCGGGTCTACCCAACAGAAAGTGAAGAAGGTTGGCAATTATCTAATGAGTCCACACAATGTAGACAGCCAATTAAAATATCCTTGAGACAACCAATCCCCTTCACTTTGTTGAAAGCTGAACTCCAGTGAGGCCTGCCCCTGACAAAATCTGTCACACCATCTAGATGATTGGGGTGACAAGAACCGATGTTTATCTAACTAGCAAGTGAGAATTTCAGCTTTCTCTAGGTCTGGCTGCCATCTCTCCAAATAAAGGATAGTCCAATGTACCCACAAACAAATAAACAAAACAAAAGAGAAAACACACACCACAAAAACTACTTTCTTAGTGTAGG
- s hg18.chr22 16133855 447 + 49691432 TTTGTTTTCCACCCCAACCCTCCCTGCAAGTTTGTCCCCCTTTGCCAGGAGCTCTCCAGCCCAGCAGCCTCTCTTCTTACTAATCTCTTTTCCAAACGCTGTCTTCTGTAGCCAGGTCTACCCAACAGAAAGTGAAGAAGGTTGGCAATTATCTAATGAGTCCACACAATGTAGACAGCCAATTAAAATATCCTTGACACAACCAATCCCCTCCGCTTTGTTGAAAGCTGAACTCCAGTGAGGCCTGCCCCTGACAAAATCTGTCACACAATCTAGATGATTGGGGTGACAAGAACCGATGTTTATCTAACTAGCAAGTGAGAATTTCAGCTTTCTCTAGGTCTGGCTGCCATCTCTCCAAATAAAGGATAGTCCAATGTACCCACAAACAAATAAACGAAACAAAAGAGAAAACACACACCACAAAAACTGCTTTCTTAGAGTTGG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16150649 447 + 50165558 TTTGTTCTCCACCCCAACCCTCCCTGCAAGTTTGTCCCCCTTTGCCAGGAGCTCTCCAGCCCAGCAGCCTCTCCTCTTACTAATCTCTTTTCCAAACGCTGTCTTCTGTAGCCAGGTCTACCCAACAGAAAGTGAAGAAGGTTGGCAATTATCTAATGAGTCCACACAATGTAGACAGCCAATTAAAATATCCTTGACACAACCAATCCCCTCCGCTTTGTTGAAAGCTGAACTCCAGTGAGGCCTGCCCCTGACAAAATCTGTCACACAATCTAGATGATTGGGGTGACAAGAACCGATGTTTATCTAACTAGCAAGTGAGAATTTCAGCTTTCTCTAGGTCTGGCTGCCATCTCTCCAAATAAAGGATAGTCCAATGTACCCACAAACAAATAAACGAAACAAAAGAGAAAACACACACCACAAAAACTGCTTTCTTAGAGTTGG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61937241 442 + 94855758 TTTGTTTTCCACCCCAACCCTCCCTGCAGGTTTGTCCCCCTTTGCCAGGAGCTCTCCAGCCCGGCGGCCTCTCCTCTTACTAATCTCCTTTCCAAACGCTGTCTTCTGTAGCCAGGTCTACCCAACAGAAAATGAAGAAGGTTGGCAATTATCTAATGAGTTCACACAATGTAGACAGCCAATTAAAATATCCTTGACACAGCCAATCCCCTCCGCTTTGTTGAAAGCTGAACTCCAATGAGGCCTGTCCCTGACAAAATCTGTCACACCATCTAGATGATTGGGGTGACAAGAACCGATGTTTATCTAACTAGCAAGTGAGAATTTCAGCCTTGCATAGTTCTGGCTACCATCTCTCCAAATAAAGGATAGTCAAATGTACCCACAAACAAAT-----TAACAAAAGAGAAAACACACACCACAAAAACTACTTTCTTAGAGTTGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 35255 429 + 38599 TTTGTCTTCCATGCCAACCCTCCCTGCAGGTTCCTCCCCCTCGGCCAGGAGCTCTCCAGCCCAGCAGCCTCTCCTCTTACTAATCTCGTTTCCAAACGCTGTCTTCTGTAGCTAGGTCTGCACAACGGAAAGTGAAGAAGGTTGGTAATTACCTAATGAGCCCATACAATGCAGACAGCCTATTAAAATATCCTTGACACAACAAATCCCCTCCCCTTTGTTGAAAGCTGAACTCCAACGAGGCCTGCCCCTCACAAAATCTGTCACTTCATCTAGATGATTGGGGTGAAGAGAACCCATGTTTATCCAACTAGCAAGTGAGAATTTCGGCTTTCTCTAGGTCTGGCTGCTATCTCTCCAAATAAACGATACTCAAAGGTACCCATAAACA--------AAACAAAAGAGAAA--ACACGCCACAAAAACTACTTTTTT--------
- i calJac1.Contig13114 C 0 C 0
- a score=33140.0
- s ponAbe2.chr22 13856025 80 + 46535552 TGTCTAATTGTGAACTGAAATCCACCCTCAAAATAGGAATTTCTGCGGAAGGTACTGTTTTTGTGGTGACTGAAATCCCA
- s hg18.chr22 16134302 80 + 49691432 TGTCTAATTGTGAACTGAAGTCCACCCTCAAAATAGGAATTTCTGTGGAAGGTACTGTTTTTGTGGTGACTCGAATCCCA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151096 80 + 50165558 TGTCTAATTGTGAACTGAAGTCCACCCTCAAAATACGAATTTCTGGGGAAGGTACTGTTTTTGTGGTGACTCGAATCCCA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61937683 80 + 94855758 TGTCTAATTGTGAACTGAAATCCACCCTCAAAATAGGGATTTCTGTGGAAGGTACTGTTTTTGTGGTAACTCGAATCCCA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 35684 30 + 38599 --TTT---------------TTCTTTCTTAAAGACGGGGTTTCTgcg---------------------------------
- i calJac1.Contig13114 C 0 C 0
- a score=110055.0
- s ponAbe2.chr22 13856105 146 + 46535552 GCGTTCTATCTGTAGGAGCACCCTGGTGCAAAACACAGTGCACAGTGGAGTGCTGTAGCTTTCGCGTCTCCAGGGACTTTGATGTCCCTCCCTCTTGCCTTGTTGAAAAATTCAAACTAGAAGAATCCTATGAAATAAAATGCAAT
- s hg18.chr22 16134382 146 + 49691432 GCGTTCTATCTGTAGGTGCACCCTGGTGCAAAACACAGTGCACAGTGGAGTGCTGTAGCTTTCGCGTCTCCAGGGACTTTGACGTCCCTCCCTCTTGCCTTGTTGAAAAATTCAAACTAGAAGAATCCTATGAAATAAAATGCAAT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151176 146 + 50165558 GCGTTCTATCTGTAGGTGCACCCTGGTGCAAAACACAGTGCACAGTGGAGTGCTGTAGCTTTCGCGTCTCCAGGGACTTTGACGTCCCTCCCTCTTGCCTTGTTGAAAAATTCAAACTAGAAGAATCCTATGAAATAAAATACAAT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61937763 144 + 94855758 TTGTTCTATCTGTAGGTGCACCCTGGTGCAAAACAC--TGCACAATGGACTGCTGTAGCTTTCGCATCTCCAGGGACCTTGATGTCCCTCCCTCTTGCCTTGTTGAAAAATTCAAACTAGAAAAATCCTATGAAATAAAATGCAAT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig20527 6896 133 + 9819 GCTTTCTATCTCTAGGCGTGCCCTTGTGCAAAACACAGTGCACAGCGGGGTGCTGTAGCTTTT-CAACTCCAGAGACCTTGGCGTCCCTTCCTCTTGCCTTGTTGAAAAATTCAAACTGTAAGAATCTTA------------CAAT
- i calJac1.Contig20527 n 0 I 144
- a score=38795.0
- s ponAbe2.chr22 13856251 49 + 46535552 TAATAAGCACTCTTTAGGTGTTTAGGG--CTGGTTAAAGACAGAAGCTAGg
- s hg18.chr22 16134528 49 + 49691432 TAATAAGCACTCTTTAGGTGTTTAGGG--TTGGTTAAAGACAGAAGCCAGg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151322 49 + 50165558 TAATAAGCACTCTTCAGGTGTTTAGGG--CTGGTTAAAGACAGAAGCCAGg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61937907 49 + 94855758 TAATAAGCACTCTTTAGGTGTTTAGGA--CTGGTTAAAGACAGAAGCTAGg
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig19362 1845 49 + 9821 TAATAAGCACTCTTTAGGTGTTTAGGGCTCTGTTTAAAGACAGAAGCTA--
- i calJac1.Contig19362 n 144 n 144
- a score=120282.0
- s ponAbe2.chr22 13856300 140 + 46535552 gccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcagaagttcgagaccagcctgatcaacatggagaaaccctgtctctactaaaaatagaaaatta--gccagg
- s hg18.chr22 16134577 140 + 49691432 gccggacgcggtggctcacacctgtaatcccagcattttgggagaccaaggcaggcagatcacctgaggtcaggagttcgagaccagcctgatcaacatggagaaaccctgtctctactaaaagcagaaaatta--gctggg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151371 140 + 50165558 gccggacgcggtggctcacacctgtaatcccagcattttgggagaccgaggcaggcagatcacctgaggtcgggagttcgagaccagcctgatcaacatggagaaacactgtctctactaaaaatagaaaatta--gccggg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61937956 140 + 94855758 gctgggcacgatggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaagtcaggagtttgagaccagcctgatcaacatggagaaaccctgtctctactaaaagtagaaaatta--gctggg
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig13114 35714 137 + 38599 ---gggcacggtggctcacgcctgtaatcctagcactttgggaggccgaggtaggtggatcacctgaggtcaggagttcaagaccatcctgggcatcatggtgaaaccccatctttaa-aaaagaaaaaaattaaggccgg-
- i calJac1.Contig13114 C 0 I 1851
- a score=24750.0
- s ponAbe2.chr22 13856440 43 + 46535552 cgtggtggtgcatgcctgtaattccagcaacttgggaggctga
- s hg18.chr22 16134717 43 + 49691432 cgtggtggtgcatgcctgtaattccagcaacttgggaggctga
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151511 43 + 50165558 cgtggtggtgcatgcttgtaattccagcaacttgggaggctga
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61938096 43 + 94855758 tgtggtggtgcatgcctgtaatctcagatactcgggaggctaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig20527 7173 42 + 9819 cttagtggcacgcgcatgagaccccaactaatc-acaggctga
- i calJac1.Contig20527 I 144 I 340
- a score=75450.0
- s ponAbe2.chr22 13856483 113 + 46535552 ggcaagggaatcgcttgaacccgggaggcagaggttgaggtgagccaagatcgcaccattgcgctccagcctgggaa--acaagagcaaaactctgtctcgaaaaaaaaaaaaaa
- s hg18.chr22 16134760 111 + 49691432 ggcaagagaatcacttgaacctgggaggcggaggttgcggtgagccaagatcacaccattgcactccagcctgggaaagacaagaacaaaactctgtctcgaaaaaaaaaa----
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16151554 108 + 50165558 ggcaagagaatcacttgaacctgggaggcggaggttgcggtgagccaagatcacaccattgcactccagcctgggaaagacaagaacaaaactctgtctcgaaaaaaa-------
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61938139 110 + 94855758 ggcaggagtatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccattgcactccagcctggtaa--acaagagcaaaactctgtctcaaaaa---aaaaaaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig19362 1709 111 + 9821 ggcgaaagaatcacttgaacctgggaggcggaggttacagtgtgccaagatcatgccactgcactccagcctggtga----cagagcaagactccgtttcaaaaaaaaaaaaaaa
- i calJac1.Contig19362 n 340 I 1696
- a score=165147.0
- s ponAbe2.chr22 13865552 280 + 46535552 agatggagtttt--gctcttgtcgcccaggctggagtgcaatggcgcgatcttggctcaccacaacctccgcctcttggattcaaggaa---ttctgcctcagcctcctgagtagctgggattacaggcacgtgcca----------ccacgcccggctaattttgtatttttagtagagacgggagtttctccatgttggtcaggctggtctcgaactcgcaacctcaggtgatccgcccgcctcagcctcctaaggtactgggattacagacgtgagccaccacgcctggctT
- s hg18.chr22 16139692 283 + 49691432 agatggagtttt--gctctcgttgcccaggctggagtgcaatggcacgatcttggctcactgcaacctccacctcctgggttcaagcaattcttctgcctcagcctcctgagtagctgggattacaggcacgcgcca----------ccacgcccggctaattttgtatttttagtagagacaggagtttctccatgttggtcacgctggtctcgaacttgcaacctcaggtgatccgcctgcctcagcctcctaaagtgctgggattacagacgtgacccactgcgcctggctT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16160102 283 + 50165558 agatggagtttt--gctcttgtcgcccaggctggagtgcaatggcacaatcttggctcactgcaacctccgcctcctgggttcaagcaattcttctgcctcagcctcctgagtagctgggattacaggcacgcgcca----------ccgcgcccggctaattttgtatttttagtagagacgggagtttctccatgttggtcaggctggtctcgaacttgcaacctcaggtgatccgcctgcctcagcctcctaaagtgctgggattacagatgtgagccactgcgcctggctT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61946865 282 + 94855758 agatagagtttt--gttcttgttgcccaggctgctgtgcaatggcaggatcttggcttactgcaagctccgcctcctgggttcaagcaattcttctgcctcagcctcccgagtagctaggattacaggcatgtgcca----------ccacgcctggctaattttgtatttttagtagagtcagg-gtttctctatgtcggtcaggctggtctcgatctcgagacctcaggtgatccgccctcctcggcctcccagagtgctgggattacacctgtaagccaccgcacatggctT
- i rheMac2.chr10 C 0 I 322
- s calJac1.Contig12391 2 261 + 45167 AGATGGGGTTTTAAACCCATGTTGGCCAGGCTGC-------------------------------Tctcaaactcctaacctcaagtgatccgactgtctcggcctccaaaactgctgggattataggcgtgagccacagcacacagccacattcggctactttttaattttgttgagagatggg-atcttgctatgttgccca-gctggtctcaaactcctgggctcaagtgatcctcctgccttagcctcccacagggctggggctgtgggtaagagccaccCTGTC-GGCAG
- i calJac1.Contig12391 n 327 C 0
- a score=46779.0
- s ponAbe2.chr22 13865832 99 + 46535552 ACTCTGCTTTCTTTAGCTCCTTTCCCTTCCCTTGCTCTTTGCCCTGGTCCTGAGGAAATTTTCCGGAATGGAGGCTGCTTACTCTG--TAGCATTTTTCCT
- s hg18.chr22 16139975 99 + 49691432 ACTCTGCTTTCTTTAGCTCCTTTCCCTTCCCTTGCTCTTTGCACTGGTCCTGAGGAAATTTTCCGGAATGGAGGCTGCTTACGCTG--TAGCATTTTTCCT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16160385 99 + 50165558 ACTCTGCTTTCTTTAGCTCCTTTCCCTTCCCTTGCTCTTTGCACTGGTCCTGAGGAAATTTTCCGGAATGGAGGCTGCTTACGCTG--TAGCATTTTTCCT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61947469 94 + 94855758 ACTCTGCTTTCTTTAGCTCCTTTCTCTTCCCTTGCTCTTTGCACTGGCCCTGAGCAAATTTTCTGGAATGGAAGCTGCTTATTCTG--TAGCATTT-----
- i rheMac2.chr10 I 322 I 5
- s calJac1.Contig12391 263 56 + 45167 -ATCCACATTTTTTTTTTATTTTACTTT--------------------------------------------AGGTGCATActatatctggcatttttccc
- i calJac1.Contig12391 C 0 I 518
- a score=102128.0
- s ponAbe2.chr22 13866427 152 + 46535552 CCACTTCTggccaggcacggtggctcacatctctcacatctgtaatcccagcagttttggaggctgaagtgggaggaccaattgaggccaggagtttgagaccagccttggcaacatggtgaaaccttgtctctactaaa---------aatacaaaaatc
- s hg18.chr22 16140571 152 + 49691432 CCACTTCTggccgggcacggtggctcacatctgtcacatctgtaatcctagcacttttggaagctgaagtgggaggaccaattgaggccaggagtttgagaccagccctggcaacatggtgaaaccttgtctctactaaa---------aatacaaaaatc
- i hg18.chr22 C 0 I 419
- s panTro2.chr22 16160932 152 + 50165558 CCACTTCTggccgggcacggtggctcacatctgtcacatctgtaatcccagcacttttggaagctgaagtgggaggaccaattgaggccaggagtttgagaccagccttggcaacatggtgaaaccttgtctctactaaa---------aatacaaaaatc
- i panTro2.chr22 C 0 I 419
- s rheMac2.chr10 61948011 143 + 94855758 CCACTTCTggtcgggcacggttac---------tcacgtctgtaatcccagcactttgggaggctgaagtgggaggaccaattcaggccaggagtttgagaccagccttggcaacatggtgaaaccttgtctctactaaa---------aatacaaaaatc
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 837 151 + 45167 ctattATTggtcaggtgtggtggc---------tcacacctgtaatcctagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctgaccatgatggtgaaatcccatcttt-ctaaaTAAATAAATAATAAAAAAAGA
- i calJac1.Contig12391 I 518 C 0
- a score=15397.0
- s ponAbe2.chr22 13866579 46 + 46535552 agctgggcatggtggcgggcacctgtaattccagttactcgggagg
- s hg18.chr22 16141142 46 + 49691432 agctgggcatggtggtgggcacctgtaattccacttactcgggagg
- i hg18.chr22 I 419 C 0
- s panTro2.chr22 16161503 46 + 50165558 agctgggcatggtggcgggcacctgtaattccacttactcgggagg
- i panTro2.chr22 I 419 C 0
- s rheMac2.chr10 61948154 46 + 94855758 agctgggcatggtggtttttgtctgtgatcccagctactagggagg
- i rheMac2.chr10 C 0 I 404
- s calJac1.Contig12391 988 8 + 45167 AGTTGGAG--------------------------------------
- i calJac1.Contig12391 C 0 C 0
- a score=68121.0
- s ponAbe2.chr22 13866625 144 + 46535552 ttgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagctgagatcgcgccactgcaccccagcctgggggacaaaagggaaactctgtttc-------aaaaaaaaaaaaaaTCTTCTTCAATGGAA---TTTTTTTTTTTAA
- s hg18.chr22 16141188 144 + 49691432 ttgaggcaggagactcacttgaacctgggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctaggggacaaaagggaaactccgtttc------aaaaaaaaaaaaaaaTCTTCTTCAATGGAA----TTTTTTTTTTAA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16161549 147 + 50165558 ttgaggcaggagactcacttgaacctgggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctaggggacaaaagggaaactccgtttcaaa---aaaaaaaaaaaaaaaaCTTCTTCAATGGAA----TTTTTTTTTTAA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61948604 154 + 94855758 ctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggggacaagagggaaactccgtttcaaaaacaaaacaaaacaaaaaaaaTCTTCAATGAATTTTTTTTTTTTTTTAA
- i rheMac2.chr10 I 404 I 311
- s calJac1.Contig12391 996 72 + 45167 TTGAAGCAAAGAA-------GGACCCAGGAAG----------------------------------------------------AAAG--------------------AAAAAATAAAAAGAATCTTCTTCAATGGAA--TTTTTTTTTTTTA-
- i calJac1.Contig12391 C 0 C 0
- a score=107900.0
- s ponAbe2.chr22 13866769 130 + 46535552 GAAACTTGGTTTCATTTTCCATTAAGGTGAAAGCTAACATCTGGGTTCAATTCAGTTCTTAGCCTACACATTCTTGCTTTCTTTCTGTCTTGTCTGCTGTTTTGAGGTGTTTTAGACATTGCTGAGTTTA
- s hg18.chr22 16141332 130 + 49691432 GAAACTTGGTTTCATTTTCCATTAAGGTGAAAGCTAACATCTGGGTTCAATTCAGTTCTTAACCTACACATTCTTGCTTTCTTTCTGTCTTGCCTGCTGTTTTGAGGTGTTTTAGACATTGATGAGTTTA
- i hg18.chr22 C 0 N 0
- s panTro2.chr22 16161696 130 + 50165558 GAAACTTGGTTTCATTTTCCATTAAGGTGAAAGCTAACATCTGGGTTCAATTCAGTTCTTAACCTACACATTCTTGCTTTCTTTCTGTCTTGTCTGCTGTTTTGAGGTGTTTTAGACATTGATGAGTTTA
- i panTro2.chr22 C 0 N 0
- s rheMac2.chr10 61949069 130 + 94855758 gaaaCTTGGTTTCATTTTCCATTACGGTGAAAGCTAACATCTGGGTTCAATTCAGTTCTTGGCCTACACATTCTTGCTTTCTTTCTGTTTTGTCTGCTATTTTGAGGTGTTTTAGACATTGCTAAGTTTA
- i rheMac2.chr10 I 311 N 0
- s calJac1.Contig12391 1068 129 + 45167 GAAACTTGGTTTCATTTTCCGTTAAGGTGAAAGCTGACATATGGGTTCGGTTCAGTTCTTAGCCTACACGTGGTTGTTTTCTTTCTGTCTTGTCTGCTGTGTTGAGGTGTTTTAGACATTGCTGCGTTT-
- i calJac1.Contig12391 C 0 I 1717
- a score=24265.0
- s ponAbe2.chr22 13871583 48 + 46535552 CAAAGT--TACGATGTCAGG--TCAG-TGCTGTAG-TGCCTAGAACTTTATGGA
- s hg18.chr22 16145433 51 + 49691432 CAAAGT--TACAATGTCAGGT-TCAGTTGCTGTAGTTGCCTAGAACTTTATGGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16165832 51 + 50165558 CAAAGT--TACAATGTCAGGT-TCAGTTGCTGTAGTTGCCTAGAACTTTATGGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61953588 51 + 94855758 CAAAGT--TACAATGTCAGGT-TCAGTTGCTGTGGTTGCCTAGAACTTTACGGA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig19362 3516 52 + 9821 caaagtgctgggattacaggcgtgagccactgcacctggc--AAACTTTGTGGT
- i calJac1.Contig19362 I 1696 n 1717
- a score=64675.0
- s ponAbe2.chr22 13871979 90 + 46535552 CAGAGCTCCAAGACGCCCATGTTACATGATGGGTGAGCATCTGTAGTTTCCTTCCTCTTAGTCCCTGTGGAAAAAACCTCGATCCAGAAG
- s hg18.chr22 16145833 90 + 49691432 CAGAGCTGCAAGACGCCCATGTTACATGATGGGTGAGCATCTGTAGTTTCCTTCCTCTTAGTCCCTGTGGAAACAGCCTCGATCCAGAAG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16166232 90 + 50165558 CAGAGCTGCAAGACGCCCATGTTACATGATGGGTGAGCATCTGTAGTTTCCTTCCTCTTAGTCCCTGTGGAAACAGCCTCGATCCAGAAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61953990 90 + 94855758 GAGAGCTCCAAGACGCCCATGTTACATGATGGGTGAGCATCTGTGGTTTCCTTCCTCTTAGTCCCTGTGGAAAAAGCCTTGATCCAGAAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 6 83 + 53326 CAGAGCTCCGAGG-ACATATGT----GGATGGCTGAGCATCTGCAG-TTCTTTCTGCTTAGTCCCTGTGGAAAAAG-CTCAATCCAGACA
- i calJac1.Contig11249 n 1717 I 215
- a score=187307.0
- s ponAbe2.chr22 13872069 214 + 46535552 GAGAAGGACTGCTCTTGGTGCATGGGTGGGTGAAGGCTGAACTCTGGGGAAGGAGCTGAGGCTTGAAGGAGAGGCACTGCGGCCAGGGCACACACAGGAAATGAAGGGACTCAGATAGGATGAAGGGTTTCAGGTGACTTTTCACGTTGAGGACAGAGCTGGTCAAGAAAACTACAAATCAACACT-----------------CCTAGGCTCCTAACATTACTGGGAGACC
- s hg18.chr22 16145923 214 + 49691432 GAGAAGGACTGCTCTTGGTGCATGGGTGGGTGAAGGCTGAACTCTGAGGAAGCAGCTGAGGCTTGAAGGAGAGGCTCTGCGGCCAGGGCGCACGCAGGAAATGAAGGGACTCAGATAGGATGAAGGGTTTCAGGTGACTTTTCATGTTGAGCACAGAGCTGGTCAAGAAAACTACAAATCAACACT-----------------CCTAGTCTCCTAACATTACTGGGAGACC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16166322 205 + 50165558 GAGAAGGACTGCTCTTGGTGCATGGGTGGGTGAAGGCTGAACTCTGAGGAAGCAGCTGAGGCTTGAAGGAGAGGCTCTGCGGCCAGGGCGCATGCAGGAAATGAAGGGACTCAGATAGGATGAAGGGTTTCAGGTGACTTTTCATGTTGAGCACAGAGCTGGTCAAGAAAACTACAAATCAACACT-----------------CCTAGCCTCCTAACATTA---------C
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61954080 214 + 94855758 GAGAGGGCGCGCTCTTGGTGCATGGGTGGGTGAAGGCTGAACTCTGGGGAAGCAGCTGAGGCTTGAAGGAGAGGCTCTGCGGCCAGGGCACGCGCAGGAAATGAAGGAACTCAGATAGGATGAAGGGTTTCAGGTGACTTTTCATGTTGAGCACAGACCTGGTCAAGAAAACTACAAATCAACACT-----------------CCTAGACTCCTAACATTACTGGGAGATC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 2914 230 + 45167 GACAGGGACTGCTCCAGGTGCTCGGGCCCGTGAACGCTGGACCCCAGGGAAGCAGCTGAGGCTTGAAGGAGAGGCTCTGCAGCCAGGGCACGTGCAGGAAATGAAGGAACTCAGAGAGGATGAAGGGTTTAGGGTGGCTTTGTATGTTGAGCACAGAGCTGGTCAAGAAAACTACAAATTAGgactgggcgtggtggctcaagcctgtaatcctagcactt-tgggaggcc
- i calJac1.Contig12391 I 1717 I 1136
- a score=184129.0
- s ponAbe2.chr22 13872283 207 + 46535552 CGCCTCCTTGATATCTCATGAATCGCAGAATTTCCCAGATAAAGTAGCTCATTTAATTATCCTCTTTGCTACTATCACTAAACCAGTACATTTTTCCACGGTTTCCTAGTCTTATCACAGATAGTAGAGATGGAAAACCTAAATTACACTCTAATGGATGAAATGTCAGTTCAAAAATCCCA---TGATTTCCAGCACTTTTCTCTAGCA
- s hg18.chr22 16146137 207 + 49691432 CGCCTCCTTGATATCTCATGAATCGCAGAATTTCCCAGATAAAGTAGCTCATTTAATTATCCTCTTTGCTGCTATCACTAAACCAGTTCATTTTCCCACAGTTTCCTAGTCTTATCACAGATAGTAGAGATGGAAAACCTAAATTACACTCTAATGGATGAAATGTCAGTTCGAAAATCCCA---TGATTTGCAGCACTTTTCTCTAGCA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16166527 207 + 50165558 CGCCTCCTTGATATCCCATGAATCGCAGAATTTCCCAGATAAAGTAGCTCATTTAATTATCCTCTTTGCTGCTATCACCAAACCAGTTCATTTTCCCACAGTTTCCTAGTCTTATCACAGATAGCAGAGATGGAAAACCTAAATTACACTCTAATGGATGAAATGTCAGTTCGAAAATCCCA---TGATTTGCAGCACTTTTCTCTAGCG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61954294 206 + 94855758 CGCCTCCTTGATATCTCATGAATGGCAGAATTTCCCAGATAAATTAGCTCATTTAATTATCCTCTTTGCTACTATCACTAAACCGGTACATTTTCCCACAGTTTCCTAGTCTTATCACAGATAGTAGAGATGGAAAACCTAAATTACACTCTAATGGATAAAATGTCAGTTTGAAAATCCCA----GATTTGCAGCACTTTTCTCTAGCA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 304 210 + 53326 TGCCTCTTTGATAGCTCATGAATCACAGAACTTCCCAGATAAATCAACTCATTTAATTATCCTCTTTGCAGCTGTCACTAACCCGGTACATTTTCCCAGAGCTTCCTAGTTTTATCACAGATAGTAGAGGTGGAAAACCTAAATTACACTCGAATGGATGAAGTGTCAGTTCAAAAATCCCACGCTGTTCTGCAGCACTTTTCTCTGGCA
- i calJac1.Contig11249 I 215 C 0
- a score=132307.0
- s ponAbe2.chr22 13872490 253 + 46535552 TTACAGAACTTCCCCTACAAAGCTTCACAGCCATCAGACTTTCATCCCAACTCTGGCTTGACACTTCCCTGCAGTTCCAGTTCTACCATTTCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg-----------------------------------tgtgtgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACCG--CCCCCCCACCATGTGTGTTATTATGGTACCAGTCACATAATTGGCTCCCAA
- s calJac1.Contig11249 514 204 + 53326 TTACAGAAGTTCCCCCACAAAGCTTCACAGCCATCAGACTTTGATCCCAGCTCT-GTTTGACACCTCCCTGCAGTTCCCTTTCTACCATTTC--------------------ATGTGTGTGTGCACCCGCTATTGCAAATGCCTTGGCTGTCTCAAGATTTGTATG---------------------------------------------------------------TTTCACCGCCCCCCCCCACCATG--TGGTATCATGGTAGCAGTCACATAATTGGCTCCCAA
- i calJac1.Contig11249 C 0 C 0
- s rheMac2.chr10 61954500 206 + 94855758 TTACAGAACTT-GCCTACAAAGCTTCACAGCCATCAGACTTTCATCCCAACTCTGGCTTGACACTTCCCTGCAGTTCCCTTTCTACCATTTC------------------ATGTGTGTGTGTGTGCACACTATTGCAAATGTCTTGGTTGTC-CCAGATCTGTATG---------------------------------------------------------------TTTCACCG-CCCCCCCCACCATGTATGTTATTATGGTAGCAGTCGCATAATTGGCTCCCAG
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16166734 218 + 50165558 TTACAGAACTTCCCCTACAAAGCTTCACAGCCATCAGACTTTCATCTCGACTCTGGCTTGACACTTCCCTGCAGTTCCTGTTCTACCATTTC--------gtgtgtgtgtgtgtgtgtgtgtgtgCACACTATTGCAAATGCCTTGGTTGTC-CAAGATTTGTATG---------------------------------------------------------------TTTCACCGCCCCCCCCCACCATGTATGCTATTATGGTAGCAGTCACATAATTGGCTCCCAA
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16146344 224 + 49691432 TTACAGAATTTCCCCTACAAAGCTTCACAGCCATCAGACTTTCATCTTAACTCTGGCTTGACACTTCCCTGCAGTTCCCGTTCTACCATTTCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCACGCTATTGCAAATGCCTTGGTTGTC-CAAGATTTGTATG---------------------------------------------------------------TTTCACCG--CCCCCCCACCATGTATGTTATTATGGTAGCAGTCACATAATTGGCTCCCAA
- i hg18.chr22 C 0 C 0
- a score=308375.0
- s ponAbe2.chr22 13872743 315 + 46535552 TAAACATTTACTTGCAATTTGAGAACAATTTATGGGTGAAGATACCCA---AGTGCTATTCGTTTGTTCTCTGCTTCTGGGTGACCTGCAGGGACATCCCTTGCTCTCAATGTTAATGTTCCCAGTACTTTCTGTTCAGTGTGAAAAGGATCCATGAATTGTCTCCCACACAAACCAGCCATGCAGGGCAAGATTTACTTCTAAGTGTTTCTTGTCGCCTTTGAAGTGTGATTGGAGGAGCCAGGCTTTTGTCTCCCTCCACTGATGCCTAAACTTTAACCACTGGACATTCATTCACCTGTACTGAGTATGTCATTT
- s hg18.chr22 16146568 315 + 49691432 TAAACATTTACTTGCAATTTGAGAAAAATTTATGGGTGAAGATATTCA---AGTGCTATTCGTTTGTTCTCTGCTTCTGGGTGACCTGCAGGGACATCCCTTGCTCTCAATGTTAATGTTCCCAGTACTTTCTGTTCAGTGTGAAAAGGATCCATGAATTGTCTCCCACACAAACCAGCCATGCAGGGCAAGATTTACTTCTAAGTGTTTCTTGTCGCCTTTGAAGTGTGATTGGAGGAGCTAGGCTTTTGTCTCCCTCCGCTGATGCCTAAACTTTAACCACTGGACATTCATTCACCTGTACTGAGTATGTCATTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16166952 315 + 50165558 TAAACATTTACTTGCAATTTGAGAAAAATTTATGGGTGAAGATACCCA---AGTGCTATTCGTTTGTTCTCTGCTTCTGGGTGACCTGCAGGGACATCCCTTGCTCTCAATGTTAATGTTCCCAGTACTTTCTGTTCAGTGTGAAAAGGATCCACGAATTGTCTCCCACACAAACCAGCCATGCAGGGCAAGATTTACTTCTAAGTGTTTCTTGTCGCCTTTGAAGTGTGATTGGAGGAGCTAGGCTTTTGTCTCCCTCCAGTGATGCCTAAACTTTAACCACTGGACATTCATTCACCTGTACTGAGTATGTCATTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61954706 314 + 94855758 TAAACATTTACTTGCAGTTTGAGAAAAATTTATGGGTGAAGATACCCA---AGTGCTATTCCTTTGTTCTCTGCTTCTGGGTGACCTGCAGTGAAATCCCTTGGTCTCAATGTTAATGTTCCCAGTACTTTCTGTTCAATGTGAAAAGGATCCATGAATTGTCTCCCACACAAACCAGTCATGCAGGGCAAGATTTATTTCTAAGTGTTTCTCGTCGCCTTTGAAGTG-GATTGGAGGAGCTAGGCTTTTGTCTCCCTCCACTGATGCCTAAACTTTAACCACTGGACATTCATTCACCTGTACTGAGTATGTCATTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 718 306 + 53326 TAAACATTTACTCGCAGTTTGAGAAAAATTTACG-----------CCATTTAGTGCTACTCCTTTGTTCTCTGCTTCTGGGTGACCTGAACTGAAATCCTTTGCTCTTGATGTTAATGTTCCC-TTACCTTCTGTTCAAGGTGAAAAGGATTCATGAATTCTCTCTCACACAAACCAGCCATGCAGGGCAAGATTTACTTCTAAGTGTTTCCTATCACCTTTGAAGTGTGATTGCAGGAGTTAGGCTTTTGTCTCTCTCCACTGATGCCTAAACTTTAACCACTGGACATTCATTCACCTGTACTGAGTATGTCATTT
- i calJac1.Contig11249 C 0 C 0
- a score=142253.0
- s ponAbe2.chr22 13873058 196 + 46535552 TGCCTATGCCCTTTTAAAATGGCCTTTCCATGAGCAGTAAAGAATCCTAAGTGAAGAACCCAGAtcactgtgttgcccaggctggtcttgagctcctgggcacaaacaatcctcctgtctcagccccccaaaatgctgagattacagatatgagccactgtgcccagcCTAGATTTGCtatatatatatatatata
- s hg18.chr22 16146883 196 + 49691432 TGCCTATGCCCTTTTAAAATGGCCTTTCCATGAGCAGTAAAGAATCCTAAGTGAAGAACCCAGATGActatgttgcccaggctggtcttgaactcctgggcacaagcaatcctcctgtctcagcctcccaaaatgctgagattacagatatgagccactgcgcccagcCTAGATTTGCtatatgtatatatatata
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16167267 196 + 50165558 TGCCTATGACCTTTTAAAATGGCCTTTCCATGAGCAGTAAAGAATCCTAAGTGAAGAACCCAGATGActatgttgcccaggctggtcttgaactcctgggcacaagcaatcctcctgtctcagcctcccaaaatgctgagattacagatatgagccactgcacccagcCTAGATTTGCtatatatatatatatata
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61955020 196 + 94855758 GTCATATGCCCTTTTAAAATGGCCTTTCCATGAGCAGTAAAGAATCCTAAGTAAAGAACACAGATGActatattgcccaggctggtcttgaactcctggtcccaagcaatcctcctgtctcagcctccccaaatgctgagattacaggtatgagccactgtgcccagcCTAGACTTGCCatatatatatatatata
- i rheMac2.chr10 C 0 I 513
- s calJac1.Contig11249 1024 167 + 53326 TCCCTGTGCCCTTTTTACATAGACTTTGCATGAGCAGTAAAGAACCATAAATGAGGAACCTAGTTGActatgttgcccaggctggtcttgaactcctggtctcaagcaatcctcccatctcagcctcccaaaa---tgagattacaggcatgag--------ccCAGCCTAGATTTGC------------------
- i calJac1.Contig11249 C 0 C 0
- a score=126442.0
- s ponAbe2.chr22 13873254 194 + 46535552 ta--------tttttttttttgaaacagagtcttgctcttgttgccaaggctggagtgcagtggtgcgatcccaactcactgcaacctccgcctcccag------gtgattctcctgcctcagcctcccgagtagctgggattacaggtgcctgccaccatgcctggctaatttttgta--tttttttagtagagactgaaaaatacaac
- s hg18.chr22 16147079 197 + 49691432 ta-----ttttttttttttttgaaagggagtcttgctcttgtctccaaggctggagtgcagtggtgcaatcccagctcaccgcaacctctgcctcccag------gtgattctcttgcctcagcctcccgagtagctgggattacaggtgcctgccaccacgcctggctaatttttgta--tttttttagtagagactgaaaaatacaac
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16167463 200 + 50165558 tatttttttttttttttttttgaaagggagtcttgctcttgtctccaaggctggagtgcagtggtgcgatcccagctcaccgcaacctccgcctcccag------gtgattctcctgcctcagcctcccgagtagctgggattacaggtgcctgccaccatgcctggctaatttttgta--tttttttagtagagactgaaaaataca--
- i panTro2.chr22 C 0 I 2
- s rheMac2.chr10 61955729 186 + 94855758 --------ttttattttttttgaaacagagtctcactcttgttgccaaggctggagtgcaatggtgcaatcccagctcactacaacctccgcctcccgggttcaagtgattcttctgcctcagcctccccagtagctgggattacaggcacctgccaccacgcccggctaatttttgtatttttttttagtaga----------------
- i rheMac2.chr10 I 513 C 0
- s calJac1.Contig11249 1191 178 + 53326 ------------ttttttttttaactagagtctcactcttgtcggctaggctgaagtgcagcggcgccatctcagctcactgcaacctctgcct--caa------gagattcttttgcctcagcctcccaagtagctgggattacaagcgcctacctccgcacctggctagtttttgtg---ttttttagtagagacagga---------
- i calJac1.Contig11249 C 0 C 0
- a score=93552.0
- s ponAbe2.chr22 13873448 124 + 46535552 atcacattgtatttcatcacgttggccaagctggtctcaaactcctgacttgaggtgatccgcctgacttggcctctcaaagtgctgggatacaggcgtgagccaccgtgcccggccTAGATTT
- s hg18.chr22 16147276 124 + 49691432 atcacattgtatttcatcgcattggccaggctggtctcaaactcctgacttgaggtgatccgcctgacttggcctctcaaaatgctgggatacaggcgtgagccaccgtgtccggcctagattt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16167665 124 + 50165558 atcacaatgtatttcatcgcattggccaggctggtctcaaactcctgacttgaggtgatccgcccgacttggcctctcaaaatgctgggatacaggcgtgagccaccgtgtccggccTAGATTT
- i panTro2.chr22 I 2 C 0
- s rheMac2.chr10 61955915 120 + 94855758 --cacgcgg--tttcatcacgttggccaggctggtctcaaactcctgacttgaggtgatccgccccacttggcctctcaaagtgctgggatacaggcgtgaaccaccacgcccggccTAGATTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 1369 114 + 53326 ----------gtttcaccatgttggccaggctggtctcaaactcctgacttgtggtgatccaccagccttagcctctcaaagtgctgggacacaggtgtgagccaccacacctggccTGGATTC
- i calJac1.Contig11249 C 0 I 2882
- a score=720471.0
- s ponAbe2.chr22 13873743 982 + 46535552 GCAGAGACTTTGAGGACGGGAATGACGTGGGGAAAGGGCATGATGGATTCACAGGCTCCTTTGCTCACACTGTATCTACTATGTGTTCTGGGTGCCTGAAGAGCAGACCGCAGGTGGTGGGTAGTGCACGCTCATGGAAGGATTTGTCTGGGGTTGGTAAAGACTTGGGCGTACTTCACTGCCAAAAAGGGAGCACCAGTGGAGAGAATCTGAAAATGGTTTTGAATAATGCACAGGCGCCAGGGAGGCAGAGGAGAGGAAGTGATCCCAGTGAAACAAGTATTAACAAAGTCTTTGGGACTAAAACTCTTTGGAACAAATTTATGCCTGGGTAGGGAAGTTCTGGACTCAGGCTGGCTTCATGGCACAGTCTCTGTGGAACAGGTACTTGCAAAGTCTCAGGTATGGCCTTGTTAGCAAGTGGCAAGCTGGACACCTAGGTCCTACAAAGCCCTATCTACTTTTAGCCACATTTTACTTTTGCATCACTAGATCCAAAAGAGGCAAGGATGCCTTGTCCCAGGCTTGGGGGACAAAGCTGGCCTCCCATGGAAGGAA--------AGGAGATTACAGCTGGGGCTCTCAGTGGGAAACCTACTCCTGGAAGAGTCCTGGTAGCTCTGACCCCCGTGGCCATTTGTTCTCACCTCTCTTCTAGCGCCTGTCACACTGCAGTGTCATCCTTTATTTACTTAACAAATAATAATCTGCCTTCCTCACCAGCACTGAGCTTCCTCAGTGCAGAAGTAGAGTTCGTCATCTTAGCTCCC-TCCAGGGCTATGGCCATGCTCAAGAAAGTTGACCAAGATTGGAAATGAATGAGTGCGTGCTGCTTCCCCATCTCCAGACGCCACAGTCTCTCGCCTAGATGAAGGCGCTAACTAATAACTGGGAGCCCACCTGGACTCTTACCTCCCTGGACTCTTACCTCCCTCCCTGCTGTTTGCCGCATTGGGGAGAGACCAGAGCCACCTTTCTAATGCGC
- s hg18.chr22 16147569 954 + 49691432 GCAGAGACTTTGAGGACGGGAATGACCTGGGGAAAGGGCATGATGGATTCACAGGCTCCTGTGCTCACACTGTATCTGCTATGTGTTCTGGGTGCCTGAAGAGCAGATCGCAGGTGGTGGGTAGTGCATGCTCATGGAAGGAGTTGTCTGGGGTTGGTAAAGACTTGGGCGTACTTCACTGCCAAAAAGGGAGCACCGGTGGAGAGAATCTGAACATGGTTTTGAATAATGCACAGGAGCCAGGGAGGCAGAGGAGAGGAAGTGATCCCAGTGAAACAAGTATTAACAAAGTCTTTGGGACTAAAACTCTTTGGAACAAATTTATGCCTGGGTAGGGAAGTTCTGGACTCAGGCTGGCTTCATGGCACAGTCTCTGTGGAGCAGGTACTTGCAAAGTCTCAGGTATGGCCTTCTCAGCAAGTGGCAAGCTGGACACCTAGGTCCTACAAAGCCCTATCTACTTTTAGCCACATTTTACTTTTGC-TCACTAGATCCAAAAGAGGCAAGGATGCCCTGTCCCAGGCTTGGGGGACAAAGCTGGCATCCCATGGAAGGAAAGGAGATGAGGAGATGAGAGCTGTGGCTCTCAGTGGGAAACCTCCTCCTGGAAGAGTCCTGGTAGCTCTGACCCCCATGGCCATTTGTTCTCACCTGTCTTCTAGCACCTGTCACACTGCAGTGTCATCCTTTATTTACTTAACAAATAATAATCTGC-------------------CTTCCTCAGTGCAGAAGTAGAGCTCGTCATCTCAGCTCCC-TCCAGGGCTATGGCCGTGCTCAAGAAAATTGACCAAGATTGGAAATGAATGAGTGCGtgctgcttccccatctccagacgccacagtctgtcacctagctcaaggcgctaactaataactgggagccca----------------cctggactcttacctccctccctgctgtttgccacactggggagagaccagagccacctttctaatgcgc
- i hg18.chr22 C 0 I 1
- s panTro2.chr22 16168308 947 + 50165558 GCAGAGACTCGAAGGACGGANNTGACTGGGNNAAAGGGCATGATGGATTCACAGGCTCCTCTGCTCACACTGTATCTGCTATGTGTTCTGGGTGCCTGAAGAGCAGACGCAGGGTGGTGGGTAGTGCATGCTCACGGAAGGAGTTGTCTGGGGTTGGTAAAGACTTGGGCGTACTTCACTGCCAAAAAGGGAGCACCGGTGGAGAGAATCTGAACATGGTTTTGAATAATGCACAGGAGCCAGGGAGGCAGAGGAGAGGAAGTGATCCCAGTGAAACAAGTATTAACAAAGTCTTTGGGACTAAAACTCTTTGGAACAAATTTATGCCTGGGTAGGGAAGTTCTGGACTCAGGCTGGCTTCATGGCACAGTCTCTGTGGAGCAGGTACTTGCAAAGTCTCAGGTATGGCCTTCTCAGCAAGTGGCAAGCTGGACACCTAGGTCCTACAAAGCCCTATCTACTTTTAGCCACATTTTACTTTTGCATCACTAGATCCAAAAGAGGCAAGGATGCCCTGTCCCAGGCTTGGGGGACAAAGCTGGCCTCCCATGGAAGGAA--------AGGAGATGAGAGCTGTGGCTCTCAGTGGGAAACCTCCTCCTGGAAGAGTCCTGGTAGCTCTGACCCCCATGGCCATTTGTTCTCACCTGTCTTCTAGCACCTGTCACACTGCAGTGTCATCCTTTATTTACTTAACAAATAATAATCTGC-------------------CTTCCTCAGTGCAGAAGTAGAGCTCGTCAACTCAGCTCCC-TCCAGGGCTATGGCCGTGCTCAAGAAAATTGACCAAGATTGGAAATGAATGAGTGCGtgctgcttccccatctccagacgccacagtctgtcgcctagctcaaggcgctaactaataactgggagccca----------------cctggactcttacctccctccctgctgtttgccacactggggagagaccagagccacctttctaatgcgc
- i panTro2.chr22 I 350 I 1
- s rheMac2.chr10 61956204 958 + 94855758 GCAGAGACTTCGAGGACGGGAATGACCTGGGGAAAGGGCATGATGGATTCACGGGCTCCTCTGCTCACACCGCATCTGCTATGTGTTCTGGGTGCCTGAAGAGCAGACGGCAGGTGGTGGGTAGTGCATGCTCGTGGAAGGAGTTGTCTGGGGTTGGTAAAGACTCGGGCGTACTTCACTGCCAAAAGGGGAGCACCAGTGGAGAGAGTCTGAACATGGTTTTGAATAATGCACAGGAGCCAGGGAGGCAGAGGAGAGGGAGTGAGCCCAGTGACACAAGTATTAACAAAGTCTTTGGGACTAAAACTCTTTGGAACAAACGGATGCCTGGGTAGGGAAGTTCTGGACTCAGGCTGGCTTCATGGCACAGTCTCTGTGGAGCAGGCACTTGCAAAGTCTCGGGTATGGCCTTCTCAGCAAGTGGCAAGCTGGACACCTGGGTCCTACAAAGTCCTATCTACTTTTAGCCACATTTTACTTTTGCATCACTAGATCCAAAAGAGGCAAGGATGCCCTGTCCCAGGCTTGGGGGACAAAGCCAGCCTCCCATGGAAGGAC--------AGGAGATGAGTGCTGTGGCTCTCAGTGGGAAACCTCCTTCTGGAAGAGTCCTAGTAGCTCTGACCCCCACAGCCATTTGTTCTCACCTCTCTTCTAGTGCCTGCCACACTGCAGTGTCATCCTTTATTTACTTAACAAATAATAATCTGCCTTCCTCACCAGCCCCGAGCTTCCTTAGTGCATAAGTAGAGTTAGTCATCTCAGCTCCC-TCCTGGGCTACGGCCATGCTCGAGGAAGTTGACCAAGATTGGAAATGAATGAGTGCGCGCTGCTTCCCCATCTCCAGAAGCCACAGTCTCCCGCCTAGATTAAGGTGCTAAGTAAT-ACTGGGAGCCTA----------------CCTGGACTCTTGCCTTCCTCCCTGCTGTTTGCTGTGTTGGGGAGAGACAAGAGCTACACtttt-------
- i rheMac2.chr10 C 0 I 307
- s calJac1.Contig12391 4280 917 + 45167 -----------------------GACCTGGGGAAAGGGCATGATGGATTCGCGGACTCCTTTGCTCTCACAGCATCTACTGTGCATTCTGGGTGCCTGAAGAGCAGACGGCAGGTCGTGGGCAGTGCGCACTCATGGAAGGAGTTGTCTGGGGTTGGTAAAGACTTGGGTGTATTTCATTGCC-AAAGGGGAACAGCAGTGGAGAGAATCCAAATATGGTTTTGAATAAGTCAGAGGAGCCAGGGAGGCAGAGGAGAGGAAGTGATCCCAGTAAAACAA-TATTAACAAAGTGTTT-GGACGAAATCCCTTTGGAACACATTTATGCCTCGGT-GGGAAGCTCTGGACTCAGGCT-GCTTCGTGGCACAGTCTCCGTGAAGCAGCTCCTTGCAAAGTCTCAGGTGTGGCCTTCTCCGCAAGT-------TGGACACCTGGGTCCTACAAAGCCCCGTCTACTTTTAGCTGCATTTTCCTTTTGCCTCACTAGATCCAAAAGAGGCAAGGACACCCTGTCCCAGGCTTGGGAGGCAAAGCCGGCCT-CCGTGGGAGAGA--------AGGAGATGAGAGCTGTGGCTCTCGGTGGGAAACCTCCTCCGGGAAGGGCCCTGGTAGCTTTGACCCCCACGGCCATTTGTTCTCACCTCCCTCCTAGCGCCTGTCACACTGCATTGTCATCCTTTATTTA-TCAAC-AATAATACTCTTCCTTCCTCACCAGCACTGGGCTTCCTCAGGGC---AGTACAGTTCGTCACCTCAGCTTCCGTCCAGGGCT---GCCATGAGCAAGAAAGTTGACCAAGATGGGAAATGAGTGAGTGCGCGCTGCTTCCCCAGCTCCAGACGCCAGCGTCTCCCGCCTAGATGAAGGC----ACTAGTAATTGGGGGCCCA----------------CCT-GATTCTTGCCTCCCTCCCTGCTGCTTGCCACATT-GGGAGAGACCAGAGCCACCTTTCCAACACCC
- i calJac1.Contig12391 I 1136 C 0
- a score=25360.0
- s ponAbe2.chr22 13874725 31 + 46535552 AATCCTTTCACGTCTCTCCCTACCCCAAACC
- s hg18.chr22 16148524 31 + 49691432 aatcctttcacgtctctccctgccccaaacc
- i hg18.chr22 I 1 I 268
- s panTro2.chr22 16169256 31 + 50165558 aatcctttcacgtctctccctgccccaaacc
- i panTro2.chr22 I 1 I 268
- s rheMac2.chr10 61957469 31 + 94855758 AATCCTTTCACATCTCTCCCTGCCCCAAACC
- i rheMac2.chr10 I 307 I 265
- s calJac1.Contig12391 5198 31 + 45167 AGTCCTTTCATGTCTTGCCCAGCCCCAAACC
- i calJac1.Contig12391 C 0 I 384
- a score=971551.0
- s ponAbe2.chr22 13875331 1271 + 46535552 ctctgtccacccaaggtggagtcccagtggtacgatcacagctcactgcagcctcaacctttctgggctcaagccatcctcttgcctgagcct-ctgagtaggggaaactacaggtgtgtgccaccaccacacccaactaattttaaaattatttgtagagagagggcttccctatgttgcttgggctggtcttaaactcctggactcaagtgatccttctgccttgacctcccaaaatgctggg-ataacaggcCCCAGATGCTTTAAACTGACAGGACCAGGACAGGTAAGGTCATTTGTGGTCTGGCCGA-------CTCATGCCTGCTCCCCACCTGCAGCTCCAAACTCTGGTCCTCACAAGTGCCTTTAGCTCACCCAATGTTTCCTGCTGTCTTGATTGCCTTTAGTCCTTCACGCAATGAAGCAATGTCCTTAGTTTCTCTGATCCCCATTTCACCTAGGTCATTCCTTCAGGTCTCAGCTGACTGTCTTCCTCTTGCCATCACTAACCTCCCCAGAGAAGGCTGGATGCCCCTGTGCTG---------------------------------------------------------------------------------------------------------GCCCCTGCCTAGGTCACTGCGATGCCCTCTGAGCCCAGCACAACGCACAGCACTTAGTGCACTGGTGAACACAGGGGTCTAGAAGAGATGAAAAGACCTAACAGCAGCCAGCAGAAAAGCAGAGGAAGGAGGAGAGAGAAAGCCTGAGAGTCAGAGAAGGGTGAAAGAGTGTGATCCTGAGTAGATGGCAGGGCACAGATGGGA----GCTGTGAGCTGTGTGTGACACACGCTGGGTCCCTGTGGCAGATGCAAGTGATCCATCTGTAGGTTATTCTTAGGAAGTGTGAAATCAATGTCAGGAGAGAAGGGAGCTGAAGCTAGCAACTGAAGAGTCACCCCAGGAGAGGACGGAGAGAGAACATGCAGAGGAGAGGGAGCAAGCAAGAGGGGTTACAGGACCAGGACAAGGGCAGCAGTGTTGAGGGCAAGGAGGTCTTGAGCATCCTGATAGGGCCATGGACAAGCCATGGATAG--ACAGAGGGAAATATCAGGGACAGGAGGGAACTTCTGGATTAAGACCCCAGATGGGTGGCTCCAGAGGGGCTGGACAACTGGCACAGGGGGCAAGATTAGCTCTGGGAAGGGGTAAGG--ACACCCCTTCTTCCTCTGAGATAGCAGGAAGAAAGAACAAAGACACGTATCACGGATGTCCCATGGAGGAAAGCTGAGGGAGTTGATACCTGACAGCCTCTACTCTGCGtgaagttgaaggtta--------aagattcagggagtctag
- s rheMac2.chr10 61957765 1341 + 94855758 ctctgt-cagccaagctggagt-ccagtggtactattgcagctcactgcagcctcaacc-tcctgggctcaagcaatcctcttgcctgagcctcctgaatagtggaaactacaggtgtgtgccaccaccacacccaactaattttaaaattatttgtagagagagggcttccctatgttgcccaggctggtctcgaactcctggactcaagtgatccttctgccttaacctcccaaagtgctggg-ataacaggcCCCAGATGCCTTAAACT-----------GACAGGTAAGGTCATTTGTGGTCTGGCCAA-------CTCATGCCTGCTCCCCACCTAGAGCTCCAAACTCTAGTCCTCACAAGTGCCTTTAGTTCACCCAGTGTTTCCT-CTGTCTTGATTGCCTTTGGTCCTTCACGCAATGAGGCAATGTCCTTAGTTTCTCTGATCCCCATTTCACCTCAGTCATtccttcaggtctcagctgactgtcttcctctcgccgtccctaaccccccaagagaaggctggatgcccctctgctgggctttcctggagctctgcacttccctcatgaagcacctatcaacccatctgta----------------------tctgcccc-gggcccgtcagggcagggttgcccctgcctaggtcactgcgacgccctctgagcccagcacaacgcagagcactcggtacactggtgaacacatgggtctagaagggatgaaAGGACCTAACGGCAGCCAGCAGAAAAGCAGAGGAATGAGGAGAGAGAAAGCCTGAGAGTCAGAGAGGCATGAAAGGATGTGATCCTGAGTAGATGACAGGGCGCAGATGGGAGGATGCTGGGAGC--TGTGTGACACGCGCTGGGTCCCTGTGGCAGATGCGAGTGATCCATCTGTAGATGACTCGTAGGAAGTGTGAAATCCATGCCAGGAGAGAAGGGAGCTGAAGCGAGCAACTGAAGAGTCACCCTGGGAGAGGACGGAGAGAGAACATGCAGAGGAGAGGGAGCAAGCAGGAGAGGTTACAGGACCAGGACAAGGGCAGCGGTTTTGAGGGCAAGAAGGTCTTGAGCATCCTGATAGGGCCATGGAAAAGCCATGGATAG--ACAGAGGGAAACATCAGGGACAGGCGGGAACTCCTGGAACAAGGCCCCAGACGGGTGGCCCCAGAGGGGCTGGGCAACCGGCACAGGTGGCAAGATTAGCTCTGGAAAGGGGTAAGG--ACCCCCCTTCTTCCTCTCAGACAGCAGGAAGAAAGAACAAAGACCCATATCACGGATGTCCCACGGAGGAAAGCTGAGGGAGCTGACACCCGACAGCCTCTACTCTGCGTGAAGTTAAAGGTTA--------AAGATTCAGggagtctag
- i rheMac2.chr10 I 265 C 0
- s panTro2.chr22 16169555 1260 + 50165558 ctctgt-cacccaagctggtgt-ccagtggtacgatcacagctcactgcagcctcaacc-tcctgggctcaagccatcctcttgcctgagcctcctgagtaggggaaactacaggtgtgtgccaccaccacacccaactaattttaaaattatttgtagagagagggcttccctatgttgctcaggctggtctcaaactcctggactcaagtgatccttctgccttgacctcccaaagtgctggg-ataagaggcCCCAGATGCTTTAAACT-----------GACAGGTAAGGTCATCTGTGGTCTGGCCAA-------CTCATGCCTGCTCCCCACCTGCAGCTCCAAACTCTGGTCCTCACAAGTGCCTTTAGCTCACCCAGTGTTTCCTGCTGTCTTGATTGCCTTTAGTCCTTCACGCAACGAGGCAATGTCCTTAGTTTCTCTGATCCCGATTTCACCTAGGTCATTCCTTCAGGTCTCAGCTGACTGTCTTCCTCTTGCCGTCGCTAACCTCCCCAGAGAAGGCTGGATGCCCCTGTGCTG---------------------------------------------------------------------------------------------------------GCCCCTGCCTAGGTCATTGCGACGCCCTTTGAGCCCAGCACAACACACAGCACTCAGTGCACTGGTGAACACAGGGGTCTAGAAGAGATGAAAGGACCTAACAGCAGCCAGCAGAAAAGCAGAGGAAGGAGGAGAGAGAAAGCCTGAGAGTCAGAGAGGGGTGAAAGGGTGTGAACCTGAGTAGATGACAGGGCACAGATGGGA----GCTATGAGCTGTGTGTGACACACGCTGGGTCCCTGTGGCAGATGCAAGTGATCCATCTGTAGCTTATTCTTAGGAAGTGTGAAATCAGTGTCAGGAGAGAAGGGAGCTGAAGCTAGCAACTGAAGAGTCACCCCGGGAGAGGACGGAGAGAGAACATGCAGAGGAGAGGGAGCAAGCAGGAGGGGTTACAGGACCAGGACAAGGGCAGCAGTTTTGAGGGCAAGGAGGTCTTGAGCATCCTGATAGGGCCATGGACAAGCCATGGATAG--ACagagggaaacatcagggacaggagggaactcctggagcaaggccccagatgggtggccccagaggggctgggcgactggcacaggtggcaagattagctctggaaagtggtaaggacacaccccttcttcctctgagatagcaggaagaaagaacaaagACACATATCATGGATGTCCCATGGAGGAAAGCTGAGGGAGTTGATACCTGACAGCCTCTACTCTgcgtgaagttgaagttta--------aagattcagggagtctag
- i panTro2.chr22 I 268 C 0
- s hg18.chr22 16148823 1257 + 49691432 ctctgt-cacccaagctggagt-ccagtggtacgatcacagctcactgcagcctcaacc-tcctgggttcaagccatcctcttgcctgagcctcctgagtaggggaaactacaggtgtgtgccaccaccacacccaactaattttaaaattatttgtagagagagggcttccctgtgttgctcaggctggtctcaaactcctggactcaagtgatccttctgccttgacctaccaaagtgctggg-ataagaggcCCCAGATGCTTTAAACT-----------GACAGGTAAGGTCATTTGTGGTCTGGCCAA-------CTCATGCCTGCTCCCCACCTGCAGCTCCAAACTCTGGTCCTCACAAGTGCCTTTAGCTCACCCAATGTTTCCTGCTGTCTTGATTGCCTTTAGTCCTTCACACAACGAGGCAATGTCCTTAGTTTCTCTGATCCCCATTTCACCTAGGTCATTCCTTCAGGTCTCAGCTGACTGTCTTCATCTTGCCGTCGCCAACCTCCCCAGAGAAGGCTGGATGCCCCTGTGCTG---------------------------------------------------------------------------------------------------------GCCCCTGCCTAGGTCATTGCGACGCGCTTTGAGCCCAGCACAACACACAGCACTCAGTGCACTGGTGAACACAGGGGTCCAGAAGAGATGAAAGGACCTAACAGCAGCCAGCAGAAAAGCAGAGGAAGGAGGAGAGAGAAAGCCTGAGAGTCAGAGAGGGGTGAAAGGGTGTGATCCTGAGTAGATGACAGGGCACAGATGGGA----GCTATGAGCTGTGTGTGACACACGCTGGGTCCCTGTGGCAGATGCAAGTGATCCATCTGTAGCTTATTCTTAGGAAGTGTGAAATCAGTGTCAGGAGAGAAGGGAGCTGAAGCTAGCAACTGAAGAGTCAGCCTGGGAGAGGACGGAGAGAGAACATGCAGAGGAGAGGGAGCAAGCAGGAGGGGTTACAGGACCAGGACAAGGGCAGCAGTTTTGAGGGCAAGGAGGTCTTGAGCATCC-GATAGGGCCATGGACAAGCCATGGATAG--ACagagggaaacatcagggacaggagggaactcctggagcaaggccccagatgggtggccccagaggggctgggcgaccggcacaggtggcaagattagctctggaaaggggtaagg--acaccccttcttcctctgagatagcaggaagaaagaacaaagACACATATCATGGATGTCCCATGGAGGAAAGCTGAGGGAGTTGATACCTGACAGCCTCTACTCTgcgtgaagttgaagttta--------aagattcagggagtctag
- i hg18.chr22 I 268 C 0
- s calJac1.Contig12391 5613 1340 + 45167 --ctgtactcccaagctggagt-gcagtggtaccatcacagctcactgcagcctcagcc-tcctgggctcaagcagtcctcttgcctgagcctgccaagtagcagagactacaggtatgtgcccccttcacatccagctaattttaaaattatttgtagagagggggcttccctatgttgctcaggctggtctggaactcctggactcaagtgatccttccaccttgacctcccaaagtgctgggaataacaggcT-------CTTTAAACT-----------GACCGGTGAGGTCGGCTGCAGCCTGGCCAGCTGCTCTCTCCTGCCTGCTCCCTACCTGGAGCTCCAAGCT------CTCACAAGTGCCTTTAGTTCCCCCAGTGTGCCCTGCAGCCTTGATGGCCTTTGGTCCTTCACATGATGCAGCAATGTCCTTAGTTTCTCCGATTCCCACTTCACCTAGGTCAAGCCTTCGGGTCTCAGCTGACCGTCTTCCTCTCGCCATCACTAACCTAACC-GAGAAGGCT-GATGCCCCTCTGCTGGGCTTTCCTGGAGCTCTGCACTTCCCTCATG----------------------AAGCAACTGTCAAGCCACCTGTATCTGCCACGGGGCCCATCAGGGCACAGGTGCACCTGCCTAGGTCACCGAGATGCCTTCCGAG-CAAGCACAACGCGCAGCACTCAGTGCACCGGTCAACACATGGGTCTAGAAGAGACGAAAGGACCTAACAGCAGCCAGCAGAAAAACAGAGGGAGGAGGAGAGAGAAAGCCTGCGAGTCAGAGAGGGGTGAGAGGGTGTGATCCTGAGTCGATGACAGGGCCCAGAGGGGAGGGTTCTGTGAGCTGCGTGTGACACGCGCTGGGTCCCTGTGGCAGGCGCGAGTGATCCACCTGTAGATTACTCGTAGGAAGTGCAAAGTCAGTATCAGGAGAGAAGGGGGCCGAAGCTCGCAACTGGAGAGTCACCCCGCGAGAGCACG----GAGAAGTCGCGGAGGAGCGGGAGCAAGCAGGAGGGGTTA-AGGACCACGACAAGGGCGGCGGTTTTGAGGGCGAGGAGGTCTCGAGCATCCTGACAGGGCCGTGGAAAAGCTGTGGAGAGACACAGAGGGAAACATCAGGTACAGGAGGAAAGCCCTGGACGGAGGCCCCAGATGGGTGGTCCCAGA-GGGCTGGGCAACTGGCACAGGCAGCAAAACCAGCTCTGGAAAGGGGTCAAG--ACACCCCTTCTTCGTCCGAGACAGCAGGAAGAAAGAGCAAAGACACATATCACAGCTGTCCCATGGAGGAAAGCTGAGGGAGTTGACACCCGGCAGCCTCTCCTCTGCATGCAGTTGAAGGTTATCTGGGTTAAGAGTCAGGGAGTCTGG
- i calJac1.Contig12391 I 384 I 67
- a score=80333.0
- s ponAbe2.chr22 13876805 160 + 46535552 TCTTGTTGAAGCAGAGCGAGTTTAGGGGACAATAAAAAAAGGCCCACCGAAGAAAAGGGGAGGGCACAGCAGTTTGCCAGCTTCGCCGTTTGTGTCCTG-----------GCCTTGATATTTCGAGAAGAGTTTATTCCTTGTACATGCTGGGGTTACAGGTTTGCTCTTC
- s hg18.chr22 16150284 159 + 49691432 TCTTGTTGAAGCAGAGTGAGTTTAGGGGACAATAAAAAAAGG-CCACCAAAGAAAAGAGGAGGGCACAGCAGTTTGCCAGCTTTGCCATTTGTGTCCTG-----------GTCTTGATATTTCGAGAAGGGTTTATTCCTTGTACATGCTGGGGTTACAGGTTTGCTCTTC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171019 159 + 50165558 TCTTGTTGAAGCAGAGTGAGTTTAGGGGACAATAAAAAAAGG-CCACCGAAGAAAAGGGGAGGGCACAGCAGTTTGCCAACTTTGCCATTTGTGTCCTG-----------GTCTTGATATTTCGAGAAGGGTTTATTCCTTGTACATGCTGGGGTTACAGGTTTACTCTTC
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61959309 159 + 94855758 TCTTGTTGAAGTGGAGCAAGTTTAGGGGACAATAAAAAAGGG-CCACCGAAGAAAAGGGGAGGGCATAGCACTTTGCCAGCTTCGCCATTTGTGTCCTG-----------GCCTTGATATTTCGAGAAGGGTTTATTCCTTGCACATGCTGGGGTTACAGGTTTACTCTTC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 7020 122 + 45167 tcttgtt-------acccaggctggagtgcaat-------gg-c---------------aggatctcggctcatcgcaacctccgcctcctgagttcagacaattctcctgcctcagcctcctgagta-------------------gctgggattacaggcacgcgccac
- i calJac1.Contig12391 I 67 I 141
- a score=126308.0
- s ponAbe2.chr22 13876965 185 + 46535552 GTACATAAACATGTGGCATGTGTATATTGTATGCCTGTGCTACATGCAGCATAAACATTGCTTTGAATAAATGTAATCatttattaatttgcccacaaaaatttattgagcacctgctctgtgcaaggcactgacgagtgttcaggggagacaaaatggataaaaaacaga--------------------------------------ccttcactctgaag--------------------------------------------------------------------------------------------------------------------------------
- s hg18.chr22 16150443 185 + 49691432 GTACATAAACATGTGGCATGTGTATATTGCATGCCTATGCTACATGCAGCATAAACGTTGCTTTGAATAAATGTGGTCatttattaatttgcccacaaaaatttattgagcacctgctctgtgcaaggcactgacaagtgttcaggggagacaaaatggataaaaaacaga--------------------------------------cctgcactctgaag--------------------------------------------------------------------------------------------------------------------------------
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171178 185 + 50165558 GTACATAAACATGTGGCATGTGTATATTGCATGCCTATGCTACATGCAGCATAAACGTTGCTTTGAATAAATGTGGTCatttattaatttgcccacaaaaatttattgagcacctgctctgtgcaaggcactgacaagtgttcaggggagacaaaatggataaaaaacaga--------------------------------------cctgcactctgaag--------------------------------------------------------------------------------------------------------------------------------
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61959468 185 + 94855758 GTACATAAACATGTGGCATGTGTATATTGCATGCCTATGCTACATGCAGCATAAACATTGCTTTGAATAAATGTAATCATGTattaatttgctcacaaaaatttattgagcgcctgctctgtgcaaggcactgatgagtgtttaggggagacaaaatggataaaaACCTGA--------------------------------------CCCGTACTCTGAAA--------------------------------------------------------------------------------------------------------------------------------
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 4365 351 + 53326 GTACATAAACACGTGGCATGTGTATGTTGCGTGTCTGTGCTGCATGCGGCATAAACATTGCTGTAAATAAATGTGATCatttattaatttgccaacaaaagtttattgagcatctggtctgtgcaaggcatggacgagtgctcaggggagacaaaaaggatgaaaaacccataaaaccaggccgggcacggtggctcacgcctattttcccagcactttgggaggccgaggcgggtggatcaagagattgagagaccatcctagtcaacaaggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtgatgcgcgcctgtagtcccaactactcaggag
- i calJac1.Contig11249 I 2882 I 133
- a score=36559.0
- s ponAbe2.chr22 13877150 48 + 46535552 caacACTAGGGTATTAGAGTGCAGCTCTTCAGGAGACATAGAATGTGA
- s hg18.chr22 16150628 48 + 49691432 cAACACTAGGGTATTAGAGTGCAGCTCTTCAGGAGACGTAGAATGTGA
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171363 48 + 50165558 cAACACTAGGGTATTAGAGTGCAGCTCTTCAGGAGACGTAGAATGTGA
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61959653 48 + 94855758 CAACACCAGGGTATTAGAGCGCAGCTCTTTGGGAGACACGGAATGTGA
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 4849 46 + 53326 caaaaccagggtcTTAGAGCGCAGCTCTTCAGGAGGC--AGAACGTGA
- i calJac1.Contig11249 I 133 I 1772
- a score=146887.0
- s ponAbe2.chr22 13877198 199 + 46535552 ACCACACAAGTAATTTTT---TAAAAATCAGGttgtttgttagatacggagtctggctctgtcgtccaggctggagtgcagtagctcgatcatagctcacagcagcctcagactcctggactctgtgatcctccccacacagacttcctagtagctgggatgcca----------ggtctgcaccaccacactcagctaatttaaa-----attttg--
- s hg18.chr22 16150676 199 + 49691432 ACCACACAAGTAATTTTT---AAAAAATCAAGttgtttgttagagacggagtctcgctctgtcgtccaggctggagtgcagtagcgcaatcatagctcacagcagcctcagactcctggactctgtgatcctccccactcagacttcctagtagctgggatgcca----------ggtctgcaccaccacactcagctaatttaaa-----attttg--
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171411 199 + 50165558 ACCACACAAGTAATTTTT---TAAAAATCAAGttgtttgttagagacggagtctcgctctgtcgtccaggctggagtgcagtagcgcaatcatagctcacagcagcctcagactcctggactctgtgatcctccccactcagacttcctagtagctgggatgcca----------ggtctgcaccaccacactcagctaatttaaa-----attttg--
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61959701 202 + 94855758 ACCATATAAGTAATTTTT---AAAAAATTAAGttgtttgttagagacagagtctcgcgctgtcgtccaggctggagtgcagtagcgcgatcatagctcactgtagcctc--actcctggagtctgtgatcctccccactcagacttcctagtagctgggatgcca----------ggtctgcaccaccacactcagctaattttaattttttttttt--
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 7283 211 + 45167 gccCCATAGTTTTCTTTTTTAAAAAAATTAGGTTGtttgttagagacggagtctcactctgtcgcccaggctggaatgcagtagtgcgatcatagctcactgcagcctcggactcctggactc--tgatcctccccactcagacttccgagtggcc-ggACGCCAGCTCATTGTGGGTCTGCACCACCACACTCAGCTAATTAAAA-----AATTTTTG
- i calJac1.Contig12391 I 141 I 139
- a score=116485.0
- s ponAbe2.chr22 13877397 156 + 46535552 ttttgtagaggcagagtcttgctatgttgcctcatctggtctcgaactcctgggctcaagtgatcctcctgcctctgtctccaaaagtgctgacattacagctatgagccaccacgctcagctGACTTTtaaaaattattaagatattttatgtgt
- s hg18.chr22 16150875 156 + 49691432 ttttgtagaggcagagtcttgctatgttgcctcgtctggtctcgaacttctgggctcaagtgatcctcctgcctctgtctccaaaagtgctgacattacagctatgagccaccacgctcagctGATTTTtaaaaattattaagatatgttatgtgt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171610 156 + 50165558 ttttgtagaggcagagtcttgctatgttgcctcgtctggtctcgaacttctgggctcaagtgatcctcctgcctctgtctccaaaagtgctgacattacagctatgagccaccacgctcagctGATTTTtaaaaattattaagatatgttatgtgt
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61959903 156 + 94855758 ttttgtagaggcagagtcttgctatgttgccccatctgatctcgaactcctgggctcaagtgatcctcctgcctctgtctccaaaagtgctgatattacagctatgagccaccacacccagctGATTTTtaaaaattattaagatattttatgtgt
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 7633 151 + 45167 ttttgtagagacagaatcttgctatgttgcccagtctggtctcgaattcacagcctcaagggatcctgccatacctctctccagaagttctgagattagagctaggagccaccatacccagctGACtttt-----ttttttaattgcattttatgt
- i calJac1.Contig12391 I 139 I 2483
- a score=507241.0
- s ponAbe2.chr22 13877657 651 + 46535552 ttggacaacacaATTTTAAAGTGTGCCTCTAAGCTTCAAGGTTAATGTCAAAGGGACTTGTGAGCAACCTCCA--CCCCACTGCCTCCCTTGGCTCCAATCAGAGGCTAGTTGAAGCACAGCTGTGCCCAGGAGGCCAGCGTTTGTTCTGAGCTGCTCATGACCCACGAAGGCTGGCCATTCCCAATTCCCCTGATCCTGTGCCCAGCCAGAGTCTGCTGCAACCTCTAGCTGTGCAGCCTCAA----CAAACGCCCAATCAAACTTCCTCCCCAGGGGAAAGAAGCAAAAAGAGCCATTGCCTTTCTTCTTGGGTCCTGCAAGGTCA-CGCAAAGTGGTAAGGCTGTTTGTTTCTTGCCTTGGAAGTTCAGTTACAAACGACTTGCAGCTGTGAGTTGTTTTCAGACTTTCTCTGGTGCAGTTGCCCC-CGACACCCTCCACCCTCACTGTTGCTGTGTTTACTCACAGTAGTGGGCATTTGAGCC---TTTTTTTTTTCTTTGCCcagcatcctttcttttgggaaacagccccatcccatagaccacatttcatgtaattctggcgggggtgtcagtcttagggaccagccccactcctaccgtgaaggtgggcacttgacccatcccacaccaatcagagGGGCTTTCCCTGGAATTT
- s hg18.chr22 16151135 651 + 49691432 ttggacaacacaATTTTAAAGTGTGCCTCTAAGCGTCAAGGTTAATGTCAAAGGGACTTCTGGGCAACCTCCA--CCCCACTGCCTCCCTTGGCTCCAGTCAGAGGCTGGTTGAAGCAGGGCTATGCCCAGGAGGCCAGCGTTTGTTCTGAGCTGCTCGTGACCCAGGAAGGCTGGCCATTCCCCATTCCCCTGATCCTGTGCCCAGCCAGAGGCTGCTGCAACCTCTAGCTGTGCAGCCTCAA----CAAACGCCCAATCAAACTTCCTCCCCAGGGGAAAGAAGCAAAAAGAGCCATTGCCTTTCTTCTTGGGTCCTGCAAGCTCA-CACAAAGTGGTAAGGCTGTTTGTTTCTTACCTTGGAAGTTCAGTTACAAATGACTTGCAGCTGTGAGTTGTTTTCAGGCTTTCTCTGGTGCCGTTGCCCC-CGACACCCTCCACCCTCACTGTTGCTGTGTTTACTCACAgtagtgggcatctgagcc---ttttttttttctttgtccggcatcctttcttttgggaaatagccccatcccatagaccacatttcatgtaattctggcgggggtgtcagtcttaggggccagccccactcctaccatgaaggcggacacttgacccatcccacaccaatcagaAGGGCTTTCCCTGGAATTT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16171870 645 + 50165558 ttggacaacacaATTTTAAAGTGTGCCTCTAAGCGTCAAAGTTAATGTCAAAGGGACTTCTGGGCAACCTCCA--CCCCACTGCCTCCCTTGGCTCCAGTCAGAGGCTGGTTGAAGCAGGGCTATGCCCAGGAGGCCAGCGTTTGTTCCGAGCTGCTCATGACCCAGGAAGGCTGGCCATTCCCCATTCCCCTGATCCTGTGCCCAGCCAGAGGCTGCTGCAACCTCTAGCTGTGCAGCCTCAA----CAAACGCC----CAAAATTCCTCCCC-GGGGAAAGAAGCAAAAAGAGCCATTGCCTTTCTTCTTGGGTCCTGCAAGCTCA-CACAAAGTGGTAAGGCTGTTTGTTTCTTACCTTGGAAGTTCAGTTACGAATGACTTGCAGCTGTGAGTTGTTTTCAGGCTTTCTCTGGTGCCGTTGCCCC-CGACACCCTCCACCCTCACTGTTGCTGTGTTTACTCACAgtagtgggcatctgagcc----tttttttttctttgtccagcatcctttcttttgggaaatagccccatcccatagaccacatttcatgtaattctggtgggggtgtcagtcttaggggccagccccactcctaccttgaaggtggacacttgacccatcccacaccaatcagaAGGGCTTTCCCTGGAATTT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61960163 651 + 94855758 tttgacaacgcaATTTTAAAGTGTACCTCTAAGCTTCAAGGTTAATGTCAAAGGGACAT-TGGGCAACCTCCA--CCCCACTGCCTCCCTTGGCACCAATCAGAGGCTGGTTGAAGCAGGGCTGTGCCCAGGAGGCCAGCATTTGTTCCGAGCCTCTCACGACCCAGGAAGACTGGCCGTTCTCCCTTCCCCTGATCCTGTGCCCAGCCAGAGGCTGCTGCAACCTCTAGCTGTGCAGTCTCAA----CAAACGCCCAATCAGACTTCCTCCCCAGGGGAAAGAAGCAAAAAGAGCCATTGCCTTTCTTCTTGAGTCCTGCAAGGTCACCACAAAGTGGTGAGGCTGTTTGTTTCCTGCCTTGGAAGTTCAGTTACAAACGGCTTGCAGCTGTGAGTTCTTTTCAGGCTTTCTCTGGTGCCGTTGTCTC-CGACACCCTCCACCCTCATTGTTGCTGTGTTTACTCACAGGAGTGGGCATCTGGGAC--TTTTTTTTTCTCTTGGCCCAGTGTCCTTTCTTTTGGGAAACAGCCTCATCCCATAGCTCCCATTTCATCTCATTTTGGTGGGGGTGTCAGTCTTAGGGGCCAGCCCCACTCCCACCATGAAGGTGGGCAC-TGACCCATCCCACGCCACTCAGAGGGGCTTTCCCTGGACTTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig11249 6667 660 + 53326 CTGGACAACACAATTTTAAAGTGTGCCTCTAAGCTTCAAGGTTAATGTCAAAGGGGCTTCTAGGCACTCTCCACTCCCTGCTGCCTCCCTTGGTACCAGGTAGAGGCTGGATAAAGCAGGGCTGTGCCCAGGAGGCCAGTGTTTGTTCCCAGCTGCTCATGACTCAGGAAGCCTGGCCATTCCTTATTCCCATGATCTGGTGCCGGGCCAGAGGCTGCGGAAACCTCTAGCTGAGCAGTCTCAACAGGCAATCGCCCAACCAAACTTCCTCCCCAGAGGAAAGGAGCAAAAAGAGCCACTGCCCTTCTCCTTGGGTCCTGCAAGTTCACCACAAAGTGGTGAGGCTGTTTTTTTCTTG-CTTGAAAATTCAGTTACAAACGACTTGCAGCTGTGCGTTGTTTTCAGGCTTCCTCTGGTGCCCCTGCCCCTCCACGGCCTCCACTCTCATTACCACTGTGTTGACTCACAGGAGTGGGCATCTGGGCCTTTTTTTTTTTCCCTCTGCCCAACAACCTTTCTTTTGGGAAACAGCCCCATCCTATAG-CCCTATTTTACCTCACTCTGGTGGGGGTGTCAGTCTTAGGGGCCAGCCCCACTCCTACCATGAAGGTGGGCACTTGACCCATCCCACACCAATCACAGGGGCTTTCCCTGGAATTT
- i calJac1.Contig11249 I 1772 n 2483
- a score=434448.0
- s ponAbe2.chr22 13878308 568 + 46535552 AAATATGGAACAGGAGGTCACgcgtggtggctcacacctgtagtcctagcactttgggagaccaagacgggaggagcgtttgagcccaggagttcgagaccagctctgggcaacatagcgagaccctgtctctacaaaaatacaaaaattagttgggtgtggtggcactcgcctgcagtctcagctgtttgggaggctgaagtgggaggattgcctgagctcaggaggtcaaggctgcagtgagccaaagacacaccactatactccagcctgtgtgacaaggggagaccctgtctctaaaaaaaaaaaaaaaaaCCCtaaaaattaaaataaacaaataaataaaGATTGAGCAGAAACAGAGGGGCTGAAGACAATCTGGAGCCAGAGCCCAAGATCCATCTAAGTTGAGA---CCTGTCCTTTTAAAGCCTGGTCGCTGAACTCTGCCTTTGATTCTACGAGCCCTCCTTCCTGTGCT-------------------CCCTCCTTTGCCATCCTctttcccagtcaagttagccagaatccattcctgttgcttataatcaaagaatcctgaTAACAA------ttttttttt
- s hg18.chr22 16151786 569 + 49691432 AAATATGGAGCAGGAggtcaggagtgatggctcacacctgtagtcctagcactttgggagaccaaggcgggaggagcacttgagcccaggagttcgagaccagctctgggcaacatagtgagaccccgtctctacaaaaatacaaaaattagctggatgtggtggcactcgcctgcagtcccagctgtttgggaggccgaagtgggaggattgcctgagctcaggaggtcaaggctgcagtgagccaaagtcacaccactgtactccagcctgtgtgacaaggggagaccctgtctct---caaaaaaaaaaaaaccttaaaaatgaaaataaaCAAATAAATAAAGATTGAGCAGAAACAGAGGGGCTGAAGACAATGTGGGGCCAGAGCCCAAGATCCATCTAAGTTGAGG---CCTGTCCTTTTAAAGCCTGGTCGCTGAACTCTGCCTTTGATTCTACGAGCCCTCCTTCCTGTGCT-------------------CCCTCCTTTGCCCTCCTCCTTCCCAGTCAAGTTAGCCAGAATCCATTCCGGTTGCTTATAATAGAAGAATCCTGATAACAAA--tttttttttttt
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16172515 563 + 50165558 AAATATGGAGCAGGAggtcaggagtgatggctcacacctgtagtcctagcactttgggagaccaaggcaggaggagtgcttgagcccaggagttcgagaccagctctgggcaacatagtgagaccccgtctctacaaaaatacaaaaattagctgggtgtggtggcactcgcctgcagtcccagctgtttgggaggccgaagtgggaggattgcctgagctcaggaggtcaaggctgcagtgagccaaagtcacaccactgtactccagcctgtgtgacaaggggagaccctgtctct------aaaaaaaaaaaccttaaaaatgaaaataaac----aaATAAAGATTGAGCAGAAACAGAGGGGCTGAAGACAATGTGGGGCCAGAGCCCAAGATCCATCTAAGTTGAGA---ACTGTCCTTTTAAAGCCTGGTCGCTGAACTCTGCCTTTGATTCTACGAGCCCTCCTTCCTGTGCT-------------------CCCTCCTTTGCCCTCCTCCTTCCCAGTCAAGTTAGCCAGAATCCATTCCCGTTGCTTATAATAGAAGAATCCTGATAACAAA-ttttttttttttt
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61960814 569 + 94855758 AAATGTGGAGCAGGAggtcaggcatggtggctcacacctgcagtcccagcactttgggaggccaaggcgggaagaacgcttgagcccaggagttcgagaccaggtctgggcaacagagcgagatcccgtctctacaaaaatacaaaaattagctgggtgtggtggcacttgcctgcaatcccagctgtttgggaggctgaagtgggaggactgcccgagctcacaaggtcaaggctgcagtgagtcaaagtcacaccactgtactccagcctgggtgacaaggggagaccctgtctct--------aaaaaaaaaccctaaaaattaaaataaacaaaTAAATAAATATTGAGCAGAAACAGAGGGGCTGAAGACAATTTGGAGCCAGAGCCCAAGATCCACCTAAGTTGAGACCTCCTGTCCTTTTAAAGCCTGGTCGCTGAGCTCTGCCTCTGATTCTACGAGCCCTCCTTCCTGTGCT-------------------CCCTCCTTTGCCCTCCTCTTCCCCAGTCAAGTTAGCCAGAATCCATTCCTGTTGCTTATAATCAAAGAAAACTGATAACAAtttttttttcttttt
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 10267 563 + 45167 AAAAATGGAGCTGGAggtcaggcgtggtggctcatgcctgtagtcccaacactttgggagaccaaggtgggaggagcacttgagctcaggagttcaagaccagctctgggcaacacagcaagacccca--tctacaaaaatac-aaaattaactgggagtggtggcacgtgcctgcagtcccagctgtttgggaggctgaagtgggaggattccctgagctt------tcaaggctgcagtgagccaaggt-acaccactgcactctagcctgggagacaaagggagaccctgtctct---------aaaaagaaccctaaaaattaaaataaat----aaataaaTATTGAGCAAAAACAGAGGAGCTGAAGACAATTTGGAGCCAGAATCCAAGATCTACCTAATCTGAGA---CCCATCCTTTTCAAGCCTGGTCATTGAACTCTGCCTTTGATGCTGTGCGGCCTCCTTCCTGGGCTCCCCGCTCCTTCCTGTGTGCCCTCCTTTGCC-TCCTCTTTCCCAGTCAAGGTAGCCAGAATCCATTCCTGTTGCTTATAATCAAAGAATCCTGATAACAA------TTTTTTTTT
- i calJac1.Contig12391 I 2483 I 4197
- a score=920485.0
- s ponAbe2.chr22 13893252 1246 + 46535552 AATCGG----CACTCCAGTGCAGCAAGCTGGTTCCACAGGTGCTAagggacttacagc-gcaggaagccattgctacttctagggtgaggaagacacagtaggagatgacgttgcggggctcctgaagacagggttctgtgttaggggatggaggtgatgagggaagctgggaccaggaagggagatgatgtccaactagagatggaactgtgcaggagacactgcctttgcaggacatggggcccttgcaggaggaggaacgccc--ccttcctcctggctcccacactccagtgttctgcagtgcccccaacagccagagagcaagggagatggggaaatgtggttcccaaccaaacaggccagagcagagcgtggggg-aGTGAGGACAAGTGGGCCCGCAGGCTGCAGGTGGGTACACTGTGGTGAGAACGGTACCACAGGAAGCATCCGCG-TAAGGGACTTTCCTAG-TGCTGACGCCTACGTTAGGGGTGAGGGGTATCTCATCATGAGTGGATGAGGTTTCTTCTTCAGCCTCTTTCCCTTCGACATGGAGAAACTAC--------GATCTCTCTGTGTGCTTGGCTCTGACTTCATGATCATGGGAGAGCCTGGCTGCTCTGGCTGTGGCCATTTCCAGCTCCCATCCCCCCTCGTCACGGCAGGACAGGAGGGTTCTTCATTACCCGGGAACGGCCGTGACGGTCACCTGCCCTAATCGTCCTCTCATCCCCAGGCCGCTGCTGACTCCT-GGAGGCTCCCGGGCTTCTCTGGCAC----TCTGTGCCTTTGTGGCTGTTCCCCAGCGGATCCCCCAGCCGCTCCTGCCTGTCTACATCCTACTTATGCTTCCAAGCCTGGTAGTGGACGTGGCCCTTCCTTCCTCCAGGCTGCTTCCGCGTGCTGTTTTACCCTGTGCTTGGC----GCTGACATTCATCCTCCTGCTATTGGACTGTGT-CACTGACAAGGCTGTTTAATCCACTGACCCGAAAGCCCCGGAGGCAAGGACTGTGCCTGTTTTTATCCCTGTAGCCTCCACCAGGCCAAGGAGTGCCCTGCACTAACACACAACCAGAGTCTATCAAAACGA----AATTGGGGGC--ATTTTGTATGATTTTTCAGAGAATGGGTCATTTTCACAAATTTTTGTGCCAAGACAGAAAGACCCAAGTGTAGAATGTACCACTGTTGTAGGTAGTAGCTGCAGTTGTCACAGTATCTTGAACCTAAATACATTGTCtttct----------------tttttttttttttttttt
- s hg18.chr22 16164490 1250 + 49691432 AATCGG----CACTCCAGTGCAGCAAGCTGGTTCCACAGGTGCTGagggacttacagc-gcaggaagccgttgctactcctagggttaggaagacacagtaggagatgacgttgccgggctcctgaagacagggttccgtgttagtgggtggaggtgatgagggaagctgggaccaggaagggagatgatgtccaactagagatggaactgtgcaggagacactgcctttgcacgacatggggcccttgcaggaggaggaacaccctgccttcctcctggctcccacactccagtcttctgcagtgcccccaacagccagaaagcatgggagatggggaaatgtggttcccgaccaaacaggctggagcagagcatggggt-agtgaggacaagtgggcCCGCAGGCTGCAGGTGGGTACATTGTGGTGAGAATGGAACCACAGGAAGCATCGGCG-TAAGGGACTTTCCTAG-TGCTGACGCCTACGTTAGGGGTGAAGGGTATTTCATCATGAGTAGATGAGGTTTCTTCTTCAGCCTCTTTCCCTTCGACATGGAGAAACTGT--------GATCTCTCTGTGTGCTTGGCTCTGACTTCATGATCATGGGAGAGCCTGGCTGCTCTGGCTGTGGCCATTTCCAGCTCCCATCCCCCCTTGTCCCAGCAGGACAGGAGGGTTCTTCGTTACCCAGGAACGGCCGTGATGGTCACCTGTCCTAATCGTCCTCTCGTCCCCAGGCCGCTGCTGACTCCT-GGAGGCTCCCGGGCTTCTCTGGCAC----TCTGTGCCTTTGTGGCTGTTCCCCAGCGGATCCCCCAGCCACTCCTGCCTGCCTACATCCTACTTATGCTTCCAAGCCTGGTAGTGGACATGGCCCTTCCTTCCTCCAGGCTGCTTCGGTGTGCTGTTTTACCCTGTGCTTGGCACTGACTGACATTCATCCTCTTGCTATTGGACTGCGT-CACTGACAAGGCTGTTTAATCCACTGACCTGAAAGCCCTGGAGGCAAGGGCTGTGCCTGTCTTTATCCCAGTAGCCTCCACCAGGCCAAGGAGTGCCCTGCACTAGCACACAACCCGAGTCTATCAAAACGA----AACTGGGGGC--ATTTTGTATGATTTTTCAGAGAGTGGGTCATTTTCGCAAATCTTTGTGCCAAGCCAGAAAGACCCAAGTGTAGAATGTACCACGGTTGTAGGTAGTAGCTGCAGCTGTCACAGTATCTTGAACCTAAATACCTTGCCtttct----------------tttttttttttttttt--
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16185968 1248 + 50165558 AATCGG----CACTCCAGTGCAGCAAGCTGGTTCCACAGGTGCTGagggacttacagc-gcaggaagccattgctactcctagggttaggaagacacagtaggagatgacgttgtcgggctcctgaagacagggttccgtgttagtgggtggaggtgatgagggaagctgggaccaggaagggagatgatgtccaactagagatggaactgtgcaggagacactgcctttgcacgacatggggcccttgcaggaggaggaacaccctgccttcctcctggctcccacactccagtcttctgcagtgcccccaagagccagaaagcatgggagatggggaaatgtggttcccgaccaaacaggctggagcagagcatggggg-agtgaggacaagtgggcCCGCAGGCTGCAGGTGGGTACATTGTGGTGAGAATGGAACCACAGGAAGCATCGGCG-TAAGGGACTTTCCTAG-TGCTGACGCCTACGTTAGGGGTGAAGGGTATTTCATCATGAGTAGATGAGGTTTCTTCTTCAGCCTCTTTCCCTTCGACATGGAGAAACTGT--------GATCTCTCTGTGTGCTTGGCTCTGACTTCATGATCATGGGAGAGCCTGGCTGCTCTGGCTGTGGCCATTTCCAGCTCCCATCCCCCCTTGTCCCAGCAGGACAGGAGGGTTCTTCGTTACCCGGGAACGGCCGTGATGGTCACCTGTCCTAATCGTCCTCTCGTCCCCAGGCCGCTGCTGACTCCT-GGAGGCTCccgggcttctctggcac----tctgtgcctttgtggctgttccccagcggatcccccagccgctcctgcctgcctacatcctacttatgcttccaagcctggtagtggacatggcccttccttcctccaggctgcttcggtgtgctgttttaccctgtgcttggcactgactgacattcatcctcttgctattggactatgt-cactgacaaggctgtttaatccactgacctgaaagccctggaggcaagggctgtgcctgtctttatcccagtagcctccaccaggccaaggagtgccctgcactagcaCACAGCCCGAGTCTATCAAAACGA----AACTGGGGGC--ATTTTGTATGACTTTTCAGAGAGTGGGTCATTTTCGCAAATTTTTGTGCCAAGCCAGAAAGACCCAAGTGTAGAATGTACCACGGTTGTAGGTAGTAGCTGCAGCTGTCACAGTATCTTGAACCTAAATACAttgtctttc------------------ttttttttttttttt--
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61974441 1271 + 94855758 AATCGGCACTCACTCCAGTGCAGCAAGCTGGTTCCACAGGTGCTGAGGGACTTTCAGTGGCAGGAAGCCATTGCTACTCCTAGGGTTAGGAAGCCTCAGTAGCAGATGACGTTGCCGGGCTCCTGAAGACAGGATTCTGTGTTGG-GGGTGGAGGTGATGAGGGAAGCTGGGACCAGGAAGGGAGATGATGTCCAACTAGAGATGGAACTGCGTAGGAGACACTGCCTTTGCAGGACACGGGGCCTTTGTAGGAGGAGGAGCACCCTGCCTTCCTCCGGACTCCCACACTGCAGTCTTCTGCAGCGCCCCCAGCAGCCAGAGAGCAAGGGAAATGGGGAAATGTGGTTCCCGACCAAACAGACTGAAGCAGACTGTGGGGG-ACTGAGGACAAGTGGGTCCACAGGCTGCAGGTGGGTATATTGTGGTGAGAATGGAACCACAGGAAGCATCGGCGTTAAGGGACTTTCCTAGTTGCTGATGCCTATGTTAGGGTTGAGGGGTATTTCATCATCAGTGGATGAGGTTCCTTCTTCAGCCTCTTTCCCTTCGACATGGAGAAACTG-----------TCTCTCTGTGTGCTTGGCTCTGACTTCATGATCATGGGAGAGCCTGGCTGCTCTGGCTATGGCCATTTCCAGCTCCCAT-CCCCCTTGTCACAGCAGGACAAGAGGGTTCCTCGTTACCTGGGAACAGCCGTGAGGGTCACCTGTGCTAATCGTCCTCTCGTCCCCAGGCAGCTGCTGACTCCT-GGAGGCTCCCGGGCTTCTCTGGCACTCTGTCTGTGCCTTTGTGGCTGTGCCCCAGCGGATCCCCCAGCCGCTCCTGCCTATCTATGTCCTACTTATGCTTCCAAGCCTGGTAGTGGACGTGGCGCTTCCTTCCTCCAGGCTGCTTTGGCGTGCTGTGTTACCCTGTGCTTGGC----ACTGACATTCATCCTCTTGCTATTGGACTGCGTCCACTGACAAGGCTGTTTAATCTACTGGCCTGAAAACCCTGGAGGCCAGGACTGTGCCTGTCTTTATCCCTGTAGCCTCCACCAGGCCGAGGAGCGCCCTGAACTAGCACACAACCAGAGTCTATCAAAATGA----AATTGGGGGG--ATTTTGTATGATTTTTCAGGGAGTGAGTCATTTTCGCACATTTTTGTGCCAAGCCAGAAAGACCCAAGTGTAGAATGTACCACTGTTGTAGGTAGTAGCTGTAGCTGTCACAGTACCTTGAACCTAAATATATGGTCTTTCtttttttttcttttttctttttttttttttttttt
- i rheMac2.chr10 I 9570 C 0
- s calJac1.Contig12391 16034 1211 + 45167 AGTAGG----CACTCCAGTGCAGCAAGCTGGCTGCACAGGTGCTGAGGGACTCAGAG--gcagg-agccatcgccgctcctacagttaggaacacgcagtaggagatgatgttgccaggctcctgaaggcagggctccgtgttag-gggtggaggggatgggggaatctgggaccaggaagggcaatgatgtcaaaccagggatggaactgtgcgggagacactgc-----------------cctttgcagggggagggacagcctgtcttcctcc-ggctcccacactccaggcttccgcagtgccccccacagccagggcaaaagggagatggggaaatgtggctcccaacccaacaggccggagcagagcatgggGGCACTGAGGACAAGC-GGCCCGCAGGCTGCACGT-GGTGGATTGTGGTGGGAATGGAAGCGCAAGAAGCATCAGCA-TAAGGGGCTTTCCTAG-TGCTGACACCCAAGTGATGGG-GAGGGGTATTTTATCCTGGGTGGATAAGATTCCTTCTTCAGCCTGTTTCCCTGTGACGTGGAGAAACTGTGAGCAGGGGATCCCTCCATGTGTTCGGCTCTGCCTGTGTG--CATAGGAGAGCCCGGCTGCTTTGGCTGTGGCCATTTCCAGCTCCCATCCCCCCTTGTCACAGCAGGACAGAAGGGCTCTTTGTTACCTGGGAATGGCCGAGAAGGTCACCTG-----------------TCCCCAGGCAGCTGCTGACTGCTCGGAGGCTCCCGGG-TTCTCTGGCAC----TC--TGCATTGGTGGCTGTGCCCC-GCGGGTCCCCCAGCCG--CCTGCCTGTCTGCTTCCCACTTAGGCGCCCTGG-CTGGGAGTGGACGTGGCCCTTCCTTCCTGCCTCCTGCTTCAGCTTGCCGCCTT-CCCTGTGCTTGGC----ACTGACATTCACACTCGTGCTATTGGACTGCGT-CACTGACAAGCCTGTTTCATCCGCTGGCCCGAAAGCCTTGGAGGCAAGGACTGCACGTGTCCTCATCCCTGGAGCCTCCACCAGGCCAAGGAGTGCCCTGCACCAGCGCAGGACCGAGGTCTACCAAAAAGACATCAGCGGGGGGCAGATTTTGTATGATTTTGAAGA-ACTGGGTCATTTTCTCAAATTTTTGTGCCAAGCCAGAAAGACCCGACTGTGGAATGTACCACTGTTGTAGGTAG-AGCTGCAGCTACCACAGTCTCTAGAACCTAAATTCATTGTCTTTCT----------------TTCGCTCTCCTTTTCTTT
- i calJac1.Contig12391 C 0 I 133
- a score=187216.0
- s ponAbe2.chr22 13894503 295 + 46535552 t-gaggtgggat---------------------------------------------------------------------------------------------------------------------------------------------------------------gaacagattctggctctgtcgc------ccatgctggagtgcagtgctgtgatctcggctcactgcagcctctgcctcccgggttcaggcgattctcatgcctcagcctcccgggaagctgggattacaggcacacgccaccacgcctggctaatttttgta-------------------tttttagtagagac-aggtttcaccatgtcggtcagg--------------ctggtctcaagtgatccacctgcctcggcctcccgaagtgctgggattacaggcgtgagccaccacacctgaccGCTTAATATTTTTATAAA
- s hg18.chr22 16165740 295 + 49691432 t-gaggtggggt---------------------------------------------------------------------------------------------------------------------------------------------------------------gaacagagtctggctctgtcgc------ccaggctggagtgcagtgctgcaatctcggctcactgcagcctctgcctcccgggttcaagcgattctcatgcctcagcctcctgggaagctgggattacaggcacgcaccaccacgcctggctaatttttgta-------------------tttttagtagagac-aggtttcaccatgtcagtcagg--------------ctggtctcaagtgatccacctgcctcggcctcccgaagtgctgggattacaggtgtgagccaccacacctgacAGCTTAATATTTTTATAAT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16187216 295 + 50165558 t-gaggtggggt---------------------------------------------------------------------------------------------------------------------------------------------------------------gaacagagtctggctctgtcgc------ccaggctggagtgcagtgctgcaatctcggctcactgcagcctctgcctcccgggttcaagcgattctcaagcctcagcctcccgggaagctgggattacaggcacgcaccaccacgcccggctaatttttgta-------------------tttttagtagagac-aggtttcaccatgtcggtcagg--------------ctggtctcaagtgatccacctgcctcggcctcccgaagtgctgggattacaggtgtgagccaccacacctgaccACTTAATATTTTTATAAT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61975717 295 + 94855758 t-gaggtcgggg---------------------------------------------------------------------------------------------------------------------------------------------------------------gaagaggatctggctctgtcgc------ccgggctggagtgcagtggtgagatctccgctcaccgcagcctctgcctcctgggttcaagcgattctcatgcctcagcctccggggaagctgggcttacaggcgcccaccaccatgcccggctaattttttaa-------------------tttttagtagagac-aggtttcaccatgtgggtcagg--------------ctggtctcaagtgatccacctgcctcggcctcccgaagtgctggaatcacaggcatgagccaccacacctgacAGCttaatatttttataat
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 17383 472 + 45167 tagagatgggtttcaccacattgaccaggctggtctcaagtaatccacctgccttgtcctcccaaaatgctgggattacaggcatgagctatcacacctgTCTTGCttaatatttttaaaataattaCATTACttattttattttatttttatttttattttatttttttgagacagagtcttgttctgtcgccaggcaccaggctggagtgcagcg-----atctcggctcactgcaacctctgcctccggggtgcaagcaattctcctgcctcagcctcccaagtagctgagattacaggcatgcgccaccacacccagctaatttttgtattttttttttcttttctttttttttttaaagatggggtttcaccgtgatggccaggttggttttgaactcctgatctcaggtgatccacccacctaggcctcccaacgtgctaggattacaggcgtgagccaccacacccggcc------------------
- i calJac1.Contig12391 I 133 I 133
- a score=94761.0
- s ponAbe2.chr22 13894798 123 + 46535552 AATGACATTAC-TTTTTAAGATCGTTGAGCTCAATTCTAAGGAAAATGCTTACTGAACTACCTGAGAGGCACAGTGCATCATGGTCCCCTGGAGGCCTCTTCAGTCCCCACTGCAGAGCCCAGT
- s calJac1.Contig12391 17988 111 + 45167 AATTACATTGCTTTTTTAAGATTATTGAGCTCAATGCTAAG-------------GAGCCACCTGAGAGGCACAGTGCACCATGGTCCCGTGGAGGCCTCTCCAGTCCCCAAGGTAGAGCCCAGA
- i calJac1.Contig12391 I 133 C 0
- s rheMac2.chr10 61976012 123 + 94855758 aattaCATTAC-TTTTTAAGATCGTTGAGCTCAATTCTAAGGAAAATGCTTACTGAACTACCTGAGAGGCACAGTGCATCCCGGTCCCCTGGAGGCCTCTCCAGTCCCCACTGCGGAGCCCAGT
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16187511 123 + 50165558 AATTGCATTAC-TTTTTAAGACTGTTGAGCTCAATTCTAAGGAAAATGCTTACTGAACTACCTGAGAGGCACAGTGCATCATGGTCCCCTGGAGGCCTCTCCAGTCCCCACTGCGGAGCCCAGT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16166035 123 + 49691432 AATTGCATTAC-TTTTTAAGATTGTTGAGCTCAATTCTAAGGAAAATGCTTACTGAACTACCTGAGAGGCACAGTGCATCATGGTCCCCTGGAGGCCTCTCCAGTCCCCACTGCGGAGCCCAGT
- i hg18.chr22 C 0 C 0
- a score=173890.0
- s ponAbe2.chr22 13894921 187 + 46535552 GCTCAAGTGCACGGCTCTCAGGCCCTCCCAGCACCACCCTGCCAAGGCAAGCTGGCGTGCTACTTTCGGAGAACAGGAGAAGCTAGGGAGAATGAGGCAGCCAGGGAGGCTCCCCTTTTCTCTGACTTAAGTTTCTTCTACCCTGTCAGGTTGATCTCTTCCCTGCTCCTAGCATTTGATCATCCCC
- s hg18.chr22 16166158 187 + 49691432 GCTCAAGTGCACAGCTCTCAGGCCCTCCCAGCACCACCCTGCCAAGGCAAGCTGGCATGCTACTTTCGGAGAACAGGAGAAGCTAGGGAGAATGAGGCAGCCAGGGAGGCTCCCCTTTTCTCTGACTTAAGTTTCTTCTACCCTGTCAGGTTGATCTCTTCCCTGCTCCTAGCATTTGATCATCCCC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16187634 187 + 50165558 GCTCAAGTGCACGGCTCTCAGGCCCTCCCAGCACCACCCTGCCAAGGCAAGCTGGCATGCTACTTTCGGAGAACAGGAGAAGCTAGGGAGAATGAGGCAGCCAGGGAGGCTCCCCTTTTCTCTGACTTAAGTTTCTTCTACCCCGTCAGGTTGATCTCTTCCCTGCTCCTAGCATTTGATCATCCCC
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61976135 186 + 94855758 GCTCAAGTGCACGGCTCTCAGGCCCTCCCAGCGCCACCCTGCCGATGCAAGCTGGCGTGCTACTTTCGGCGAACAGGAGCAGCTAGGGAGAATGAGGCAGCCAGGGAGCCT-CCCTTTTCTCTGACTTAAGTTTCTTCTACCCTGTCACGTTGATCTCTTGCCTGCTCCTAGCATTTGATCATCTCC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 18099 186 + 45167 GCTCAAGTGCACAGCTCTCAGGTCCTCCTAGCCCCACCCTGCCGAGGCACGCTGGCCTGCTACTTTCAGAGAACAGGAGCAGCTGGGGAGAATGAGGCAGCCAGGGAGCCT-CCCTTTTCTCTGATTTAAATTTCCTCCACCCTGTCCGGCTGATCTCTTGCCTGTTCCTCACATTTGATCATCTGC
- i calJac1.Contig12391 C 0 C 0
- a score=132576.0
- s ponAbe2.chr22 13895108 127 + 46535552 TTGGAACCAGGTTAATTGCTTTTGGGGCTTTTTGCTTGTTCAGATAACAGTCTGGTATCATCTTCAAAGGCCAAATGTCTGGAAGAGAAACAAGATGACTTCTAATAATTTACCAGCCTCTGCCTCT
- s hg18.chr22 16166345 127 + 49691432 TTGGAACCACGTTAATTGTTTTTGGGGCTTTTTGCTTGTTCAGATAACAGTCTGGTATCATCTTCAAAGGCCAAATGTCTGGAAGAGAAACAAGATGACTTCTAATAATTTACCAGCCTCTGCCTCT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16187821 127 + 50165558 TTGGAACCACGTTAATTGTTTTTGGGGCTTTTTGCTTGTTCAGATAACAGTCTGGTATCATCTTCAAAGGCCAAATGTCTGGAAGAGAAACAAGATGACTTCTAATAATTTACCAGCCTCTGCCTCT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61976321 127 + 94855758 TTGGAACCAGGTTAATTGCTTTTGGGGCTTTTTGCTTATTCAGATAACAGTCTGGTATCATCTTCAAAGGCCAAATGTCTGGAAGAGAAACAAGATGACTTCGAATAATTTACCGGCCTCTGCCTCT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 18285 127 + 45167 TTGGAACCAGGTTAATTGCTTTTGGGGCTTTTTGCTTGCTCAGATAACAGTCTGGTATCATCTTCAAAGGCCAAATGTCTGGAAGAGAAGCAAGATGACTTCTAATAATTTACCGGCCTCTGCCTCT
- i calJac1.Contig12391 C 0 C 0
- a score=420541.0
- s ponAbe2.chr22 13895235 558 + 46535552 GATTAAGAATTCTGGACACTCTAACTTATGGGGCCTGTTATTAGGAAGCTCAAAGTTTTAATTAGAAAGGGTGAGGAGATTTGTGCATTAAGAAGGGTTTAGCAGTTACTCTTAGTTTTCTCTGGGAACACTCTAGTATGTAAGAAAAGAAAAAATATATAAAAGGGGCTAAGAAGTGTCTGACCCAATGGGTATTTTATTTGTTTGT-TTGCATTTTAAGttgttgttgt------------tgttgagacagagtctcactctgtcacccaggctggagtgcagtggcacagtcttgg------------------ctcactgcaacctctgactcctg---tcaagtgattctcgtgcctcagcctcccaaggagctgggactacaggtgtccaccatcacacccagctaa-------------ttttttttttttttttgtattttttggtagagatggagtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatcctcctgaataggcctccaaaagtgctgggattacaggtgtgagccaccgtgcccagACC-TGAGGTTTTTGTTTGTTGTTTGTTTGTTTTCT
- s hg18.chr22 16166472 560 + 49691432 GATTAAGAATTCTGGACACTTTAACTTATGGGGCCTATTATTAGGAAGCTCAAAGTTTTAATTAGAAAGGGTGAGGAGATTTGTGCATTAAGAAGGGTTTAGCAGTTACTCTTAGTTTTCTCGGGGAACACTCTAGTATGTAAGAAAAGAAAAAATATATAAAAGGGGCTGAGAAGTGTCTGACCCAATGGGTATTTTATTTGTTTGT-TTGCATTTTAAGttgttgttgt------------tgttgagacagagtctcactctgtcacccaggctggagtgtagtggcacagtcttgg------------------ctcactgcaacctctgactcccgggttcaagtgattctcgtgcctcagcctcccaaggagctgggactacaggtgcccgccatcacacccagcta--------------ttttttttttttttttgtattttttggtagagatggagtttcgccatgttggccagactggtctcaaactcctgacctcaagtgatcctcctgactaggcctccaaaagtgctgggattacaggtgtgagccaccgtgcccagACC-TGAAGTTTTTGTTTGTTGTTTGTTTGTTTTCT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16187948 574 + 50165558 GATTAAGAATTCTGGACACTTTAACTTATGGGGCCTATTATTAGGAAGCTCAAAGTTTTAATTAGAAAGGGTGAGGAGATTTGTGCATTAAGAAGGGTTTAGCAGCTACTCTTAGTTTTCTCGGGGAACACTCTAGTATGTAAGAAAAGAAAAAATATATAAAAGGGGCTAAGAAGTGTCTGACCCAATGGGTATTTTATTTGTTTGT-TTGCATTTTAAGttgttgttgt------------tgttgagacagagtctcactctgtcacccaggctggagtgtagtggcacagtcttgg------------------ctcactgcaacctctgactcccgggttcaagtgattctcgtgcctcagcctcccaagctgctgggactacaggtgcccgccatcacacccagctaatttttttttttttttttttttttttttttgtattttttggtagagatggagtttcgccatgttggccagactggtctcaaactcctgacctcaagtgatcctcctgactaggcctccaaaagtgctgggattacaggtgtgagccaccgtgcccagACC-TGAAGTTTTTGTTTGTTATTTGTTTGTTTTCT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61976448 586 + 94855758 GATTAAGAATTCTGGACACTTTAACTTATGGAGCCTGTTATTAGGAAGCTCCTAGTTTTAATTAGAAAGGGTGAGGAGATGTGTGTATTAAGAAGGGTTTAGCAGTTACTCTTGGTTTTCTCTGGGAACACTCTAGTATGTTAGAAAAGAAAAAATATATAAAAGGGGCTAAGAAGTGTCTGACCCAACGGTTACTTTATTTGCTTGT-TTGCATTTTAAgttgttattgttgttgttgttgatgttgagacagagtctcactctgtcacccaggctggagtgcagtggcatgatcttggctcactgcaacctctgacctcactgcaacctctgactcccgtgttcaagtgattctcgtgcctcagcctcccacagagctgggactacaggcgcccgccatcacacccagctaa---------------ttttttttttttttgtattttttggtagagatggaatttcaccatgttggccaggctggtctcaaactccttacctcaagtgatccgcctgactaggcctccaaaagtgctgggattacaggtatgagccgccatgctcagACC-TGAAGTTTTTGTTTG---TCTGTTTGTTTTTT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 18412 540 + 45167 GATGAGGAATTCTGGACACTTTAACTTCTGGGACCTGTTCTTAGGAAGCTCAAAGTTTTGATTAGAAAAGGGGAGGAGATCTGTGCAGTAGGAAGGGCTCAGCAGT--------------TCCGGGAACACCCTACAATATAAGAAAAGAAAAAATGCATAAAAGGGACTAAGAAGTGTCTGACCCAGTGGGTATTTTATTTGTTTGCAGtttattttatgttattttt--------------ttttgagacagggtctcactctgtcacccagaatggagggcagtggtgcgatctcag------------------ctcactgcaacctccgactcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcacctgccaccatgttcggctaa--------ctttttttttttttttttttggtatgttttgatagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgacccggctgcctcggcctccaaaagtgctgggattgcaggtgtgagccatcgcgctcagccCTTAAGGTTTTTTGTTGTTGTT------------
- i calJac1.Contig12391 C 0 I 316
- a score=945580.0
- s ponAbe2.chr22 13895793 1273 + 46535552 AATTTTGAAGTGAAAGAGCAGTTTCTGGGTGACAGTCTCATTACTCCCCGttt---ttgttgttgttgtttttgagacagagtctcaccttgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggattacaggcatacgccaccatgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctgatctcgaactcctgacctcaagtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggACCCCATTACTCCCTTTTAAGAGTTCCCTTATCAGCAAAGAAACACCAAACTCACCACGATAGTGTAGGAAGCTGGTTCGAGATCAATTGTCTTTGTGTGTTGATCTGGAAAATATATCAGACAACTTAGCTGGAGAATGAAGGTAGTATTTTCTACTGCTTTCTCTGGGGTGTTCTAGACACTGGCACTGGAAATAGCTTTGGTGTCCTGAAGAGCCTTGCACAGTAGGGAGCCCTAATGTTTGCTGATAAACAAATTCCACTGTGATTTCTTGGGGGTATATTTCCTGTCTTCTTTACTCTGCAATCAGCCGAAAGTATGCCGGCGATGGCTGTTGACTAGCAGTAGCTAACAGTGCCTAAGACTTTTTctctggaatcagactgcctggtttgaatcctgggtccaccaatgaagagctgcaggacctggggcaagttgctcttgacgcttgtttcctctcctgtGTGTTCTAATATTTTGAATAGAGAGTACTAACTAATAGGAAGAGAGCACATCAGACCTTCCCCACCATGGCCCAAGAATGTGGAATCACATTCTTGTCAATCTTGTCAGCTCACGGAGTATGAGCagttatctattgctgtgtaacagatgattagaaattgagcttcaaggccaggcgcagtggctcatgcctgtaatcccaacac--tgggaggccaaggcgggcagatcacctgaggtcaggagtttgagaccagcctggcctatgtggtgaaaccccgaccctattaaaaatacaaaaattagccaagcatagtggtggacgcctgtaatcccagctactcgggag-gctgaggcaggagaatcgcttgaacctgggaggcag-ggttccagtgagccaagattgtgccattgcacaccagcctgggcgac-agagcgagactccgtctcaaaaaaaaa
- s hg18.chr22 16167032 1281 + 49691432 AACTTTGAAGTGAAAGAGCAGTTTCTGGGTGACAGTCTCATTACTCTTCAtttttgttgttgttgttgtttttgagacagagtctcactttgtcgcccaggctggagtacagtggcgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgcgtgccaccatgcccagctaatttttgtatttttagtagcgatggggtttcaccatgctggccaggctgatctcgaactcctgacctcaagtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcacccggACCCCATTACTCCCTTTTAAGAGTTCCCTTATCAGCAAAGAAACACCAAACTCACCAAGATAGTGTAGGAAGCTGGTTCGAGATCAATTGTCTTTGTGTGTTGATCTGGAAAATATATCAGAAAACTTAGCTGGAGAATGAAGGTAGTATTTTCTACTGTTTTCTCTGGGATGTTCTAGACACTGGCACTGGAAATAGCTCTGGTGGCCTGAAGAGCCTTGCACAGTAGGGAGCCCTAATGTTTGCTGATAAACAAATCCCACTGTGATTTGTTGGGGGTATATTTCCTGTCTTCTTTACTCTGCAATCAGCCAAAAGTATGCCGGTGATGGTTGTTGACTAGCAGTAGCTAACAGTGCCTAAGACTTTTTctctggaatcagactgcctggtttgaatcctgggtccaccaatgaggagctgcaggacctggggcaagttgctcttgacgcttatttcctctcctgtGTGTTCTAATATTTTGAATAGAGAGTACTAACTAACAGGAAGAGAGCACATCAGACCTTCCCCACCATGGCCCAAGAATGTGGAATCACATTCTTGTCAATATTGTCAGCTCACAGAGTATTATCAGTTATCTATTGCTGTGTAATAGATGATTAGAAATTGAGCTGCAAggccaggcgcagtggctcactcctgtaatcccaacactttgggaggccaaggccggcagagcacctgaggtcgggagtttgagaccagcctggcctacatggtgaaaccccgtccctattaaaaatacaaaaattagccaagcgtggtggtggatgcctgtaatcccagctactagcgag-gctgaggcaggagaatcgcttgaacccgggaggcgg-ggtttcagtgagccgagattgtgccattgcacaccagcctgggcgac-gaagcgaggctccgtctcaaaaaagaa
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16188522 1274 + 50165558 AACTTTGAAGTGAAAGAGCAGTTTCTGGGTGACAGTCTCATTACTCCTCAtttttgttgttgttgttgtttttgagacagagtcttactttgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgcgtgccaccatgcccagctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctgatctcgaactcctgacctcaagtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggACCCCATTACTCCCTTTTAAGAGTTCCCTTATCAGCAAAGAAACACCAAACTCACCACGATAGTGTAGGAAGCTGATTCGAGATCAATTGTCTTTGTGTGTTGATCTGGAAAATATATCAGAAAACTTAGCTGGAGAATGAAGGTAGTATTTTCTACTGCTTTCTCTAGGATGTTCTAGACACTGGCACTGGAAATAGCTCTGGTGGCCTGAAGAGCCTTGCACACTAGGGAGCCCTAATGTTTGCTGATAAACAAATCCCACTGTGATTTGTTGGGGGTATATTTCCTGTCTTCTTTACTCTGCAATCAGCCAAAAGTATGCCGGTGATGGTTGTTGACTAGCAGTAGCTAACAGTGCCTAAGACTTTTTctctggaatcagactgcctggtttgaatcctgggtccaccaatgaggagctgcaggacctggggcaagttgctcttgacgcttgtttcctctcctgtgtgttctaatattttgaatagagagtactaactaacaGGAAGAGAGCACATCAGACCTTCCCCACCATGGCCCAAGAATGTGGAATCACATTCTTGTCAATCTTGTCAGCTCACAGAGTATtatcagttatctattgctgtgtaacagatgattagaaattgagctgcaaggccaggcgcagtggctcactcctgtaatcccaacactttgggatgccaaggccggcagagcacctgaggtcgggagtttgagaccagcctggcctacatggtgaaaccccgtccctattaaaaatacaaaaattagccaagcgtggtggtggacg-ctgtaatcccagctactagcgag-gctgaggcaggagaatcgcttgaacccgggaggcgg-ggtttcagtgagccgagattgtgccattgcacaccagcctgggctac-aaagcgaggctctgtctcaaa------
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61977034 1201 + 94855758 AATTTTTAAGTGAAGGAGCAGTTTCTGGGTAACAGTCTCATTACTCTCCGGTTTTtttgttgttgttgttgttttgagacagtctcactttgtcacccaggctggagtgcagtggtgtgat--------------------------------------------------------------tagctgggattacaggcatctgccaccacacctggctaatttttgtgtttttagtggagacagggtttcaccatgttggccaggctgatcttgaactcctcacctcaagtgatccgccggcctcagcctcccaaagtgctggagatacaggcgtcagccactgcgcccagcTCCCATTACTCCATTTTAAGAGTTCCCTTATCAGCAAAGAAACACCAAACTCGCTAGGATAGTGTAGGAAGCTGGTTTGAGATCAATTGTCTTTGTGTGTTGATCTGGAAAATGTATCAGAAAACTTAGCTGGAGAATAAAGGTAGTATTTTCTACTGCTTTCTCTGGGGTGTTCTAGACACTGGCAGTGGAAATAGCTTTGGTGGCCTGAAGAGCCTTGCTCGGTAGGGAGCCCTAATGTTTGCTGATA-------------------TGTTAGGGGTGTGTTTCCTGGCCTCTTCACTCTGCAATCAGCCAGAAGTGTGCCGGCGATGGCTGTTGACTAGCAGTAGCTAACAGTGTCTAGGACTTTTTctctggaatcagactgcctggtttgaatcctgggtccaccaatgaggagctgcaggacctggggcaagttgctcttgatacttgtttcctcTCCTCTGTGCTCTAACATTTCGAATAGAGAGTACTAACTAACAGACAGAGAGCACATCAGACCTTCCCCACCATGGCCCAAGAATGTGGAATCACATTCTTGTCAATCTTGTCAGCTTGCGGAGtgt-atcagtcatccattactgtgcaacagatgattagaaattgagctgcaaggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacctgaggtcgggagtttgagaccagcctggcctacatggtgaaaccccatccctattaaaaatacaaaaattagccaagcgtggtggtggacgcctgtaatcccagctactagggggagctgaggcaggagaatggcgttaacccgggaggtggaggtttcagtgagctgagattgtgccattgcactccggcctgggtgac-agagcaagactctgtctcaaaaaaaaa
- i rheMac2.chr10 C 0 I 182
- s calJac1.Contig12391 19268 1242 + 45167 AATTTTTAAGTGAAGGAGCATTTTCTGGGTGACAGTCTCATTACTCtttttttcttttttttttg-------------agagtctcactttgtcacccaggctggagtgcagtagcgtgac--cagctcactgcaacctctgcct-ccaggttcaggcaattctcctgcctcagcctcccaagcagctgggattata-gcatctgctaccaagtctggctaaattttgtatttttagtagagatggggtttcactatgttggccaggctgatcttgaactcctgaccgcaagtgatccacctgccttggcctccaaaattgctgggattacaggtgtgagccactgcgcccagccCCCATTTCTCCCTTTTAGGAGTTCCCTTAACAGCAAAGAAACACCAAACTCACCACAATCACATAGGACGCTGGTTTGAGATCAACTGTCTTTGTGTGTAGATCTGGAAAATATATCAGAAAACTTAGCCGGAGAATGAAGGTGGCATTTTCTACCGCTTTCTCGGCGATGTTCTAGACACTGGCATTGGAGATAACATAGGTAGTCTGAGGAACCTTGCACAGGAGGGAGCCCTAACATTTGCTGATAAATAAATCCCGCCCTGATTTGTTGGGG---TATTT-CTGGCTTCTTTCCTCTGACATCAGCCGAAAGTGTGCAGGCAAAGGCTGTTGGCTCGCAGCAGCTAACGGTGTCTAGGACTTTTCctctggaatcagactgcctggtttgaatcctgggtccaccaatgaggagctgcaggacctggggcaagttg---------ctggtttcccctcctgtgtgccctcaggtttccAACAGAGAGTACTAACAGAC------AGAGCACATCAGACCTTCCCCGCTGCGGCCC----CCGGGAAATCACATTCTTGTTAATCTTGTCAGCTCACAGAGTGT-GTCGGTTAGCTATTGCTGTGTAACAGATGATTAGAAATTGAGCTGCAAggccaggcacagtggctcatgcctgtaatcccagcactttgggaggacaaggcgggcagatcacctgaggtcaggagatcgagaccagcctggccaacatggtgaaaccctgtgtttattcaaaatacaaaaattagctgggcgtggtggcgcgtgcctgtagtccgagatactcaggag-gctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccaagatcgaaccattgtactccagcctgggtaacaagaccgaaactccatctcaaaaaaaaa
- i calJac1.Contig12391 I 316 C 0
- a score=-4036.0
- s ponAbe2.chr22 13897066 13 + 46535552 aaaa----------------------------------------------------------aaaaaaaga-
- s hg18.chr22 16168313 71 + 49691432 agaaagaaagaaagagagagagagagagggagggagagggagagagagagagagaaagaaagaaagaaaga-
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16189796 9 + 50165558 --------------------------------------------------------------aaagaaaga-
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61978417 13 + 94855758 ----------------------------------------------------------aaagaaagaaaga-
- i rheMac2.chr10 I 182 C 0
- s calJac1.Contig12391 20510 13 + 45167 -----------------------------------------------------------aaaaagaaaagaa
- i calJac1.Contig12391 C 0 I 5
- a score=110884.0
- s ponAbe2.chr22 13898766 175 + 46535552 ttaatgtagaccaaagaaaacacatctgggccaatatccagctcttagggcaccagtgtgcaatctctgGCTTAAATACATGtgtatgtacgcatgtatacatgtgcctgcacgcatgtgtatgtatacatgtgtatgtatgcatatgtatgtgtgcacgaagatgtatgtatgt
- s panTro2.chr22 16191272 155 + 50165558 ttaatgtagaccaaagaaaacacatctgggccaatatccagctcttagggcaccagtgtgcaatctctgGCTTAAATACATGtgtatgtatgcatgtatacatgtgcctgcatgcatgtatatgtatacatgtgtatgtatccatatgtatg--------------------tac
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61979989 173 + 94855758 ttaatgtagaccaaagaaaacacatctgggccaatatccagctctcagggcaccagtgtgcaatctctgGCTTAAATACATGTGTATGTATGCATGTATACATGTGCCTGCATGCACAtatatgtatacatgtatatacatgcacatgtatgtgcgcatgaagatgtatg--tat
- i rheMac2.chr10 C 0 C 0
- s hg18.chr22 16169890 155 + 49691432 ttaatgtagaccaaagaaaacacatctgggccaatatccagctcttagggcaccagtgtgcaatctctgGCTTAAATACATGtgtatgtatgcatgtatacatgtgcctgcatgcatgtatatgtatacatgtgtatgtatccatatgtatg--------------------tac
- i hg18.chr22 C 0 C 0
- s calJac1.Contig12391 20528 139 + 45167 TTAATGCAGACCAAAGAAAACACAACTGGGCCCTTATCCAGCTCTCAGGCCACCAGCGTGCAATCTCTGGCTTAAATACatgtgtgtatatgcatgtgta--------tgcatgcacatgtatgtgtgcatgaagaggcatgtatgt----------------------------
- i calJac1.Contig12391 I 5 C 0
- a score=402647.0
- s ponAbe2.chr22 13901072 533 + 46535552 gcatatacgcacacgtacatatgtatatgcatgtgtgtgtacttatttatgcatgcacatgtatgcatatgtacacacTGGCCTTGCTCTTGAACACAAGCCCAAGTTTCAGCTCTTTACAGTCTAAAGTGCAGGCCATCTCCTGACGAGGCTGTCTGCACTCAGGCGTTCCCGCGCTCTTCTCCCCTTCACTCTCGCTCCTACCTCACCCCTACTTCGTGCCTGCCTCCTACAAAGCCCCACAATACCCTTGGCCAGGACAATTGGCTGGACCCCTGCTCAGAGAACCTCACACACCAGTCTCCGTGA-ACATGAAAAGCTGGCTGGAAAAGGGACGGACTTGGGGACATGTTCTTCTGTTGGACCACACTTCAAGGATGTGATGGAGCTTGAGGAGACACCTGTGCAGTCACGTTGTCTCAAACCAACAGCTTTGCAGAAACTCAGTAATGACAACCAgacagtgtggcagagtggcgggagcaggcagtttggattcaaacatgtgtgggctcaactccaggctctagtac
- s hg18.chr22 16170099 533 + 49691432 gcatatgcgcacacatacatatgtatatgcatgtgtgtgtacttatttatgcatgcacatgtatgcatatgtacaCACTGGCCTTACTCTTGAACACAAGCCCAAGTTTCAGCTCTTTACAGTCTAAAGTGCAGGCCCTCTCCTGACAAGGCTGTCTGCACTCAGGCATTCCCACGCTCTTCTCCCCTTCACTCTTACTCCTACCTCACCCCTACCTCGTGCCTGCCTCCTACAAAGCCCCACAATACCCATGGCCAGGACAATTGGCTGGACCCCTGCTCAGAGAACCTCACACACCAGTCTCCGTGA-ACATGAAAAGCTGGTTGGAAAAGGGACAGACTTGGGGACATGTTCTTCTGTTGGACCACGCTTCAAGGATGTGATGGAGCTTGAGGAGACACCTGTGCAGTCACGTTGTCTCAAACCAACAGCTTTGCGGAAACTCAGTAATGACAACCAgacagtgtggcagagtggcaggagcaggcagtttggattcaagcatgtgtgggctcaactccaggctctagtac
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16191481 533 + 50165558 gcatatgcacacacgtacatatgtatatgcatgtgtgtgtacttatttatgcatgCACGTGTATGCATATGTACACACTGGCCTTACTCTTGAACACAAGCCCAAGTTTCAGCTCTTCACAGTCTAAAGTGCAGGCTGTCTCCTGACAAGGCTGTCTGCACTCAGGCGTTCCCACGCTCTTCTCCCCTTCACTCTTACTCCTACCTCACCCCTACCTCGTGCCTGCCTCCTACAAAGCCCCACAATACCCATGGCCAGGACAATTGGCTGGACTCCTGCTCAGAGAACCTCACACACCAGTCTCCGTGG-ACATGAAAAGCTGGTTGGAAAAGGGACAGACCTGGGGACATGTTCTTCTGTTGGGCCACGCTTCAAGGATGTGATGGAGCTTGAGGAGACACCTGTGCAGTCACGTTGTCTCAAACCAACAGCTTTGCGGAAACTCAGTAACGACAACCAgacagtgtggcagagtgccgggagcaggcagtttggattcaaacatgtgtgggctcaactccaggctctagtac
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61980352 528 + 94855758 gcatatgcacacacgtacatatgtatatgca--tgtgtgtacttatgtatgcgtgcacatgtgtgcatatgtaCACACTGGCCTCGCTCTTGAACACAAGCCCAAGTTTCAGCTCTTGACAGTCTAAGGTGCAGGCCCTCTCCTGACAAGGCTGTCCGCACTCAGGCGTTCCGGCACTCTTCTCCCCTTCTCTCTTACTCCGACCTCACCCCTACTTCGTGCCTCCCTCCTACAAAGCCCCACAATACCCATGGCCAGGACAATTGGTTGGACCCCTGCTCAGAGAACCTCACACACCAGTCTCTGTGA-ACATGAAAAGCTGGCTGGAAAAGGGATGGACTTGGGGACACG-TCTTCTGTTGGACCACGCTTCAGGGATGTGATGGAGCTTGAGGAGACACCTGTGCAGTCACATTGTCTCAAACCAACAGCTTTGCGGAAACTC--TAATGACAACCAgacagtgtggcagactggcaggagcaggcagtttggattcaaacaggtgtgggctcaactccaggctctagtaa
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 20667 485 + 45167 gcacgtttgcacgtgtatatatttatatgtatgtgtgtataggt--------------gtgtatgcatgtgtgCACACTAGCCTTGCTCTTGAATACAAGCTCAGGTTTCAGCTCTTCGCAGTCTAAGGCGCAGGCCCTCTCCTGACAAGGCCGTCTGCACCCAGGCGTTCCCAGGCTCTTCTCCCCTTCTCTCTTACTCCTGCCCCACCCCTACTTCGTGCCTGCCTTCTACAAACGCCCACAACACCCATGGCCAGGACAATTGGTTGGAACCCTGATCACAGCACCTCAGATGCCAGTCTCCGTGACACATGAAAGTCTGGCTGAAAAAGGGAGGGACTTGGGGACATG-TCTTCTGTTGGACCAAGCTTCAAGGACGTGATGGAGCTTAAGTAGATACCTGCGGGGTCACGTTGTTTCAAACCAACAGCTTTGTGGAAACTC-------------AGGCAGTGTG-------GGCAGGGGCAGGCAGTTTGGATTCAATCAGGTGTGGGCACTAAT--------------
- i calJac1.Contig12391 C 0 I 360
- a score=437752.0
- s ponAbe2.chr22 13901664 575 + 46535552 tacTGTG-----------CAGATAATATTTTTATGAAGTGCCTCTAACCTGGAATGGCATCAGTAATCGTGGCAGGGTCTATGACAGACCCAGTTCTACCATTTCTTCGTCTGAAATCTCTCTTGGATTTTTCCTTCTCATTACTCCCGGGCCTGGCCTCACCTGCGGGTGCCTGAGTCTCTGACCCTGTCTTCTGGCAGCTCTCCTGCCAGAGGTGGGCTCTGCCCCACTCAACACCACCTTCCCCTGTCTTTCAGCTTTGTCCGTGTGCAGCCAGACCAACCTTCCTTGGTCGCCTCTCTATTTCGCCAAGCCACTTTCGGGTTGTCATGCTGCCTGCCAGTTGCCTGTGGCACTGGGCACAATGCCTCTGTGCTGAGCCTCTCACAGCCTTAGCCTCCTCCTCAGCATCCCTGGCCCACACATTCCCATCTGGACAACCCACCTCTTCACTGCCCTCCAATTCCTGGGCTCCTGTC--------------------------------------------------------------------------------------------ttttttttttttttttgagacggagtctcgcttt--gt-cccagactaaaatgcagtggcacgatctcggctcactacagtctctgcctcccgggttcaagcaattcttg
- s hg18.chr22 16170691 569 + 49691432 tacTGTG-----------CAGATAATATTTTCATGAAGTGCCTCTAACCTAGAATGGCATCAGTAATCGTGGCAGGGACTATGACAGACCCACTTCTACCATTTCTTCGTCTGAAATCTCTCTTGGATTTTTCCTTCTCATTACTCCCAGGCCTGGCCTCACCTGCGGGTGCCTGAGTCTCTGACCCTGTCTTCTGGCAGCTCTCGTGCCAGAAGTGGGCTCTGCCCCACTCAACACCACTTTCCCCTGTCTTTCAGCTCTGTCCGTGTGCAGCCAGACCAACCTTCCTTGGTCGCCTCTCTATTTCGCCAAGCCACTTTCCGGTTGTCATGCTGCCTCCCAGTTGCCTGTGGCACTGGGCACAATGCCTCTGTGCAGAGCCTCTCACAGCCTTAGCCTCCTCCTCAGCATCCCTGGCTCACACATTCCCATCTGGACAACCTACCTCTTCTCTGCCCTCCAGTTCCTGGGCTCCTGTC--------------------------------------------------------------------------------------------------ttttttttttgagacggagtctcgctct--gt-cccagactagaatgcagtggcacgatctcggctcactgcaatctctgcctcccgggttcaagcgattcttg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16192073 578 + 50165558 tactgtg-----------cagataatatttttatgaagtgcctctaacctGGAATGGCATCAGTAATCGTGGCAGGGACTATGACAGACCCACTTCTACCATTTCTTCGTCTGAAATCTCTCTTGGATTTTTCCTTCTCATTACTCCCGGGCCTGGCCTCACCTGCGAGTGCCTGAGTCTCTGACCCTGTCTTCTGGCAGCTCTCGTGCCAGAAGTGGGCTCTGCCCCACTCAACACCACCTTCCCCTGTCTTTCAGCTCTGTCCGTGTGCAGCCAGACCAACCTTCCTTGGTCGCCTCTCTATTTCGCCAAGCCACTTTCCGGTTGTCATGCTGCCTCCCAGTTGCCTGTGGCACTGGGCACAATGCCTCTGTGCAGAGCCTCTCACAGCCTTAGCCTCCTGCTCAGCATCCCTGGCCCACACATTCCCAACTGGACAACCTACCTCTTCGCTGCCCTCCAGTTCCTGGGCTCCTGTCttt-----------------------------------------------------------------------------------------ttttttttttttttttgagacggagtctcgctct--gt-cccagactagaatgcagtggcacgatctcggctcactgcaatctctgcctcccgggttcaagcgattcttg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61980939 574 + 94855758 tactgtg-----------cagataatatttttatgaagtgcctctaacctGGAATGTGATCAGTAATCGTGGCAGGGACTATGACAGACCCAGTTCTACCATTTCTTCGTCTGAGATCTCTCTTGGATTTTTCCTTCTCGTTACTCCCAGGCCTGGCCTCACCTGCGGGTGTCTGAGTCTCTGACCCTGTCTTCTGGCAACTCTCCTGCCAGAGGTGGGCTCCGTCCTACTCAACACCACCTTCCCCTGTCTTTCAGCTCTGGCCGTGTGCAGCCAGACCAACCTTTCTTGGTCACCTCTCTCTTTCGCCAAGCCACTCTCT-GTTGTCATGCTGCCTCTCAGTTGCCTGTGGCACTGGGCACAATGCCTCTGTGCAGAGCCTCTCACAGCCTTAGCCTCCTCCTCAGCATCCCTGGCCCACACATTCCCATCTGGACAACGTACCTCGTCGCTGCCCTCCAATTCCTGGGCTCCTGCC--------------------------------------------------------------------------------------------tttctttttttttttttagacggagtctcgttct--gt-cccaggctagaatgcagtggcacgatctcagctcactgcaatttctgcctcccgggttcaagcgattcttt
- i rheMac2.chr10 C 0 I 109
- s calJac1.Contig12391 21512 667 + 45167 cactgtgcccggccCGTACAGATAATATTTCCATGAGGTGCCTCTAACCTGGAATGGGATCGGTGATCGTGG-AGGGA-TATGGCAGACC--ATTCTACCATTTCTTTGTTTGAAATCTCTCTTGGATTTTTCCTTCTCATTACTCCGTGGCCCGGCCTCACCTGTGGATGCCTGAGCCTCTGACCCTGTCTTCCAGCAGCTCTCCGGCCGGAAGCGGGCTCTGCTCCACTCAGGACCACCTTCCCCTCTCTCTCAGCTCTGTCCGTGTGCAGCCAGACTAACATTCCTTCATCGCCTCTCACTTTTGCCAAGCCACTTTCTGGTTGTCCTGATGCCTCCCAGTAGCCTGTGGCACTGGGTGCAATGCTACTGTGCAGAGCCTCTCACAGCCTGAGCCTCCTCCTTGGCATCCCTGG--CACAGGTTCC--------CAACCTGCCTCTTTGCGGCCCTCCAATTCCTGGGCTCCTGCCTATGTTCCCTGCTGGCTGCCATGTGGTGCACCACCCTCCCTTGATGGAAATCACATGGCCTGTTAAGGCCCCTGCTGGATCACACACACAAGCCttctttttttttttgagacggagtttcgttcttggtacccaggctggagtataatggcgtgatctcggctcactgcaacctccgcctcctgggttcaggcaattctcc
- i calJac1.Contig12391 I 360 C 0
- a score=27657.0
- s ponAbe2.chr22 13902239 33 + 46535552 tgcctcagcctctggagtagctgggattacagg
- s hg18.chr22 16171260 33 + 49691432 tgcctcagcctctggagtagctgggattacagg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16192651 33 + 50165558 tgcctcagcctctggagtagctgggattacagg
- i panTro2.chr22 C 0 I 1429
- s rheMac2.chr10 61981622 33 + 94855758 tgcctcagcctcccaagtagctgggactacagg
- i rheMac2.chr10 I 109 C 0
- s calJac1.Contig12391 22179 33 + 45167 tgcctcagcctcctgagtagctgggattagagg
- i calJac1.Contig12391 C 0 C 0
- a score=63696.0
- s ponAbe2.chr22 13902842 82 + 46535552 ataaaGTGGGACAGAATACAACGTTTTGTCTTCCTAAGGAAGGAAAAAGATATTTTTAAAGTGGCACTTGAGCTGGGATTAA
- s hg18.chr22 16171947 82 + 49691432 ataaagtgggacagaatacaactttttgtcttcCTAAGGAAGGAAAAAGATATTTTTAAAGTGGCACTTGAGCTGGGATTAG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16194359 82 + 50165558 ataaaGTGGGACAGAATACAACGTTTTGTCTTCCTAAGGAAGGAAAAAGATATTTTTTAAGTGGCACTAGAGCTGGGATTAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61982434 82 + 94855758 ataaaGTGGGACAGAATACAACATTTTGTCTTCCTAAGGAAGGAAAAAGATATTTTTAAAGTGGCATTTGAGTTGGGATTAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 22460 78 + 45167 ATAACCTGGGGCAAAATGCAACGTTTTGTCTTCCT----AAGGAAAAATATATTTTAAAAGTGGCATTTGAGCTGGGATTAA
- i calJac1.Contig12391 I 176 C 0
- a score=925333.0
- s ponAbe2.chr22 13903238 1173 + 46535552 aaGGAGGGTCAGGATTTTTCTC-GGGTGAGGTGGGAAAGGTAGAAAGAACACAGTGGGCCTGTTTGGTTGGATTAATCTTCAGCTGTCTTTTACAAGAAATGCATCCCTCCACGTGCCCCTGTGCACAGGGAAGGGCTGCAACCGCCATGTCTGTGCTAAAACTCTGTCCTCCCTGGCCGTAAGTGACACCAGGCACAAGCTGCTACTCAGATCTTCTTACCTGTGAACTTGGAATTGGGGTTCATGGGTGCTGGTTACTCTCTACAACTGAAGACTTAAACTTGGGGATCTAGGAC-GGGAGCCTCCACCATGTGCCAAGCATGT--GGGAGAGGGAGAACGGAACCCAGCCTCACAGTAGAGAAGAGGAGGCCTTCGCCCCGTGGAGACCGTGAGCATTTCTCAGGTTCCGATTTGTTCCTTGTGAAGCCTGACCAGATGTTCCACCATTGGTTTTATGAGGTTTACTCATATCCTTATAATGAGCTTTCCCCTTTTTTTGTTTTATCCGTGTGTGTTTCAGTTACTAAAAACTAAAAGTGTTTGACCAAGACCCAGAGCCCTAAACATCGGAATTTATGAAAAGAGGGGGCTCTGAGACACCCCTTTAACCACAGTACAGTGTGGGAAGTACCTGGACATCAGGCTGGAAGGGCAGGTTGTAGACACATTGTGGAGGCCCTTAAATGCCTTCTATTCAAAGTGGGATAGTATTGTTCACTGTGAACTAAGAACTATGGAGGTTTTGTGCAGATGAGTCATTCACAGCTTCAGAGGTgtgctgcggagagcgaagtctggattgggggtcctcagagcttggattcgatacccgtctggtaaatggcagcattttctggctacatttctagaccttggtcaaattacctaacctctttaccttaagtttctgcgtttataaaatgagaatattaatgcttagctcat-agatttgggggaaaattatatgaaataataagtcggcaaatactaagcactcaaatgttaactgttattattTTTATTTCTCTAAATTCCTGTGACACTTACTGCCAATACCTACACATTAGCCTTACTTATTTTTGAATAATTTCAAGTATGCTGATCTTGTCTCACAAT-AGAACAAAAGCCTCTAT-GCGAGGATAACGTCTTAAAGTCCTTTCCATCTCTCCTAAT
- s calJac1.Contig12391 22538 1158 + 45167 AAGGAGGGTCAGGATTTTTCTA-GGGTGAAGTGGGCAAGGTAGAATGACTGTGGTGGGCCTGTCCGGTCGGATTCATCTTCAGTTGCCTTTTACAACAAATGCA-CCTTCCACGCGCTCCTGCACACGGGGAAGGGCTGCAACAGCCATGTCTGTGCTGAAACTCTGTCCTCCCTGGCCATAAGTGACACT-GGAACAAGCTGCTACTCAGATCTTCT----TGTGAACTTGGAATTGGGGTTCATGCATGCTGATTAGCCTCTACAATTGAAGACTTAAACTTGGGGATATAGGAC-AGGACCCTCCACCGTGGGCCAAGCATGCCAGGAAGAGGGAGAATGAGCCCCAGT-------TAGAGAAGGTGAGGCCGTCATTGCGTGGAAGCCGTGAGCTTTTCTCAGGTTCTGATTCATTCCTCGTGAAGCCTGACCAGATGTCCCACTGTTGGTTTTATGAGATTTCATTATAACCTTATAATGAGCTTTCCCTCTTTTTAG-TTTATCTGTGTGTGTTTCAGTTACTAAAAACCAGAGGTGTTTGACCAAGACCCAGAGGCCTACACACTGGAGTTTATGAAAAGAGGGGGATCTGAGATGCCCCTTTACCCAGAGTACAGTG-GGGAAGTCCCTGGACATCGGGCTGGAAGGGCAGGCTGTAGGCGCATTGTGGAGGACCTTAAACGCCCTCTATGCAGGGTAGGATAGTATTGCTCTCTGTGAACTAAGAACTGTGGAGGTTTTGTGCAGAGGAGTAATTCCCAGCTTCAGAGGTGGGCTGCAAAAAGCAAACTCTGGA-TGGAGG-CCACAGAGCATGGATTTGAGACGCATCT-GTCAGTGGCAGCATTGTCCAGCTTCATTTCTAgactctggtcaaattacctaacctcttgaacttaagtttctgcatttataaaatgagaatattaatgctcagctcataagatttggggggaaattctatgaaataatAAGTTAGCAAATACTAAGCAGTCAAATGTTCACTGTGATTATCTTTAGTTCTCTAAATTCCTGTGACACTTATTGCCGATACCTACATATTACCCTTACTTATGTTTGAATAATTTCAAGTATGCTGATCTTGTCTCACCATCAGACCAAACGCCTCTGT-GCAAAGATGATGTCTAAAACTCTTTTCC-TGTCTCAGAAT
- i calJac1.Contig12391 C 0 C 0
- s rheMac2.chr10 61982838 1177 + 94855758 AAGGAGGATCAGGATTTTTCTAGGGGTGAGGTGGGAAAGCTGGAATGCATGCAGTGGGCCTGTTTGGTTGGATTACTCTTCAGCTGCCTTTTACAAGAAATGCACCCCTCCACTCGCCCCTGTGCACAGGGAGGGGCTGCAACCGCCATGTCTGTGCTAAAACTCTGTCCTCCCCGGCTGTAAGTGACACCAGGCACAAGCTGCTACTCAGATCTTCTTACTTGTGAACTTGGAATTGGGGTTCATGGGTGCTGGTTACTCTCTACAACTGAAGACTTAAACTTGGGGATATAGGACAGGGAGCCTCCACCATGTGCCAAGCATGTGGGGGAGAGGGAGAACGGAACCCAGGCTCACAGCACAGAAGAGGAGGCCATCGCCCTGTGGAAACCGTGAGCATTTCTCGGGTTCCGATTCGTTCCTTGTGAAGCCTGACCAGATGTTCCACCATTGGTTTTATGAGATTTCTTCATATCCTTATAATGAGCTTTCCCCCTTTTTTGGTTTATTTGTGTGTGCTTCAGTTACTAACAACCAAAAGTGTTTGACCGAGACCCAGAGCCCTAAACATCGGAATTTATGAAAAGAGGGGGATCTGAGATGCCCCGTTAACCACACTACAGTGTGGGAAGTACCTGGACATCAGGCTGGAAGGGCAGGTAGTATACACGTTGTGGAGGCCCTTAAAAGCCTTCTATTCAAAGCGGGATAGTATTGCTCACTGTGAACTAAGAACTATGGAGGTTTTGTGCAGATGAGTAATTCACAGCTTCAGAGATGGgctgtggaaagtgaagtctgga-tggggg-ccgcagagcgtggattcgaaacccatctggtaagtggcagcattttccggctgcatttctagaccttggtcaaattacctaacctctttaccttaagtttctgcatttgtaaaatgagaatattaatgcttttctcataagattggggaggaaattatatgaaataataagttggcaaatactaagcactcaaatgttaactgtcattattTTTATTTCTCTATATTCCTGGGACACTTACTGCCAATACCTACACATTAGCCTTACTTATTTTTGAATACTTTCAAGTACGCTGATCTTGTCTCACAATCAGACCAAAAGCCTCTAT-GCAAGGATAACGTCTTAAACTCTTTCCCATCTCTCCTAAT
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16194757 1173 + 50165558 aaaGAGGGTCAGGATTTTTCTA-GGGTGAGGTGGGAGAGGTAGAATGAACGCAGTGGGCCTGTTTGGTTGGATTAATCTTCAGCTGCCTTTTACAAGAAATGCACCCCTCCACGTGCCCCTGTGCACAGGGAAGGGCTGCAACCGCCATGTCTGTGCTAAAACTCCGTCCTCCCTGGCCGTAAGTGACACCAGGCACAAGCTGCTGCTCAGATCTTCTTACCTGTGAACTTGGAATTGGGGTTCATGGGTGCTGGTTACTCTCTACAACTGAAGATTTAAACTTGGGGATCTAGGAC-AGGAGCCTCCACCATGTGCCAAGCATGC--GGGAGAGGGAGAACGGAACCCAGGCTCACAGTAGAGAAGAGCAGGCCATCGCCCCATGGAGAC--TGAGCATTTCTCGGGTTCCGATTTGTCCCTTGTGAAGCCTGACCAGATGTTCCACCATTGGTTTTATGAGATTTACTCATATCCTTATAATGAGCTTTCCCCTTTTTTTGTTTTATCCGTGTGTGTTTCAGTTACTAAAAACCAAAAGTGTTTGACCAAGATCCAGAGCCCTAAACATTGGAATCTATGAAAAGAGGGGGCTCTGAGACACCCCTTTAACCACAGTACAGTGTGGGAAGTACCTGGACATCAGGCTGGAAGGGCAGGTTGTAGACACATTGTGGAGGCCCTTAAATGCCTTCTGTTCAAAGTGGGATAGTATTGCTCACTGTGAACTAAGAACTACGGAGGTTTTGTGCAGATGAGTAATTCACAGCTTCAGaggtgggctgcagagagcgaagtctgga-tggggggcctcggagcttggattcgaaacccatctggtaaatggcagcattttccagctacatttctagaccttggtcaaattacctaacctctttaccttaagtttctgcatttataaaatgagaatattaatgcttagctcataagatttggggggaaattatatgaaataataagttggcaaatactaagcactcaaatgttaactattattattTTTATTTCTCTAAATTCCTGTGACACTTACTGCCAATACCTACACATTAGCCTTACTTATTTTTGAATAATTTCAAGTACGCTGATCTTGTCTCACAATCAGACCAAAAGCCTCTATGGCAAGGATAACGTCTTAAAGTCCTTTCCACCTCTCCTAAT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16172345 1174 + 49691432 aaaGAGGGTCAGGATTTTTCTA-GGGTGAGGTGGGAAAGGTAGAATGAACGCAGTGGGCCTGTTTGGTTGGATTAATCTTCAGCTGCCTTTTACAAGAAATGCACCCCTCCACGTGCCCCTGTGCACAGGGAAGGGCTGCAACCGCCATGTCTGTGCTAAAACTCCGTCCTCCCTGGCCGTAAGTGACACCAGGCACAAGCTGCTACTCAGATCTTCTTACTTGTGAACTTGGAATTGGGGTTCATGGGTGCTGGTTACTCTCTACAACTGAAGATTTAAACTTGGGGATCTAGGAC-GGGAGCCTCCACCATGTGCCAAGCATGC--GGGAGAGGGAGAACGGAACCCAGGCTCACAGTAGAGAAGAGCAGGCCATCGCCCCATGGAGACTGTGAGCGTTTCTCGGGTTCCGATTTGTTCCTTGTGAAGCCTGACCAGATGTTCCACCATTGGTTTTATGAGATTTACTCATATCCTTATAATGAGCTTTCCCCTTTTTTTGTTTTATCCGTGTGTGTTTCAGTTACTAAAAACCAAAAGTGTTTGACCAAGACCCAGAGCCCTAAACATCGGAATTTATGAAAAGAGGGGGCTCTGAGACACCCCTTTAACCACAGTACAGTGTGGGAAGTACCTGGACATCAGGCTGGAAGGGCAGGTTGTAGACACGTTGTGGAGGCCCTTAAATGCCTTCTGTTCAAAGTGGGATAGTATTGCTCACTGTGAACTAAGAACTATGGAGGTTTTGTGCAGATGAGTAATTCACAGCTTCAGAGGTGGGCTGCagagagcgaagtctgga-tggggggcctcagagcttggattcgaaacccatctggtaaatggcagcattttccagctacgtttctagaccttggtcaaattacctaacctctttaccttaagtttctgcatttataaaatgagaatattaatgcttagctcataagatttgaggggaaattatatgaaataataagttggcaaatactaagcactcaaatgttaactattattATTTTTATTTCTCTAAATTCCTGTGACACTTACTGCCAACACCTACACATTAGCCTTACTTATTTTTGAATAATTTCAAGTATGCTGATCTTGTCTCACAATCAGACCAAAAGCCTCTAT-GCAAGGATAATGTCTTAAAGTCCTTTCTATCTCTCCTAAT
- i hg18.chr22 C 0 C 0
- a score=53138.0
- s ponAbe2.chr22 13904411 56 + 46535552 TCCTATATGAGCTTCTGGGCGCAGAGATGAAGAACTCAATA-TCATTGATTGGTTGT
- s calJac1.Contig12391 23696 57 + 45167 TCCTCTGTGAGCTTGTGGGTGCAGAGATGAAGAACTCAATATTCATTGATTGGTTGT
- i calJac1.Contig12391 C 0 C 0
- s rheMac2.chr10 61984015 57 + 94855758 TCCTATATGAGCTTCTGGGCACAGAGATGAAGAACTCAATATTCATTGATTGGTTGT
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16195930 56 + 50165558 TCCTATATGAGCTTCTGGGCGCAGAGATGAAGAACTCAATA-TCATTGATTGGTTGT
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16173519 56 + 49691432 TCCTATATGAGCTTCTGGGCGCAGAGATGAAGAACTCAATA-TCATTGATTGGTTGT
- i hg18.chr22 C 0 C 0
- a score=317689.0
- s ponAbe2.chr22 13904467 286 + 46535552 TG-GGGAGCAGCAAAACCACTCTGTCTAAGACAGTAGTTAGTGGCTGGTAAACATTTCCACATGTTGTCTCCTCATCAACTGATGGTCTGGGTTTGGGGCTTAGCAGGAAAATGACCACATTACTGAAGCCACTTCCCAAATTACAAGATTTAATGAGCCAAGGAAATTAAATTATTCTCTAAAGTGTACTTTCTGGTTTAGATTATGACTTGATTGCCACATTTGTTACCACCAAATCTTTAGGGAAAATTCCACACAGATACAAATAGACGTGGGCTGAAAACAC
- s hg18.chr22 16173575 286 + 49691432 TG-GGGAGCAGCAAAACCACTCTGTCTAAGACAGTAGTTAGTGGCTGGTAAACATTTCCACATGTTGTCTCCTCATGAACTGATGGTCTAGGTTTGGGGCTTAGCAGGAAAATGACCACATTACTGAAGCCACTTCCCAAATTACAAGATTTAATGAGCCAAGGAAATTAAATTATTCTCTAAAGTGTACTTTCTGGTTTAGATTATGACTTGATTGCCACATTTGTTACCACCAAATCTTTAGGGAAAATTCCACACAGATACAAATAGACGTGGGCTGAAAACAC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16195986 286 + 50165558 TG-GGGAGCAGCAGAACCACTCTGTCTAAGACAGTAGTTAGTGGCTGGTAAACATTTCCACATGTTGTCTCCTCGTGAACTGATGGTCTGGGTTTGGGGCTTAGCAGGAAAATGACCACATTACTGAAGCCACTTCCCAAATTACAAGATTTAATGAGCCAAGGAAATTAAATTATTCTCTAAAGTGTACTTTCTGGTTTAGATTATGACTTGATTGCCACATTTGTTACCACCAAATCTTTAGGGAAAATTCCACACAGATACAAATAGACGTGGGCTGAAAACAC
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61984072 287 + 94855758 TGCGGGGGCAGCAAAACCACTCGGTCTAAGACAGTAGTTAGTGGCTGGTAAACATTTCCACATGTTGTCTCCTCATGAACTGATGGTCTGGGTTCAGGGCTTAGCAGGAAAATGACCACATTACTGAAGCCACTTCCCAAATTACAAGATTTAATGAGCCAAGGAAATTAAATTATTCACTAAAGTGTGTTTTCTGGTTTAGATTATGACTTGATTGCCACATTTGTTACCAGCAAATCTTTAGGGAAAATTCCACACAGATACAAATAGACCTGGGCTGAAAGCAC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 23753 270 + 45167 T--GGGGGCAGCAGAGCCAC--------------TAGTTAGTGGTCGGTAAACATTTCCACATGTTGCCTCCTCATGAACTG-TGGTCTGGGTTTGGGGCTTAGCAGGAAAATGACCACATTACCGAAGCCACTTCCCGAATTACAAGATTTAATGAGCCAAGGAAATTTAATTATTCTCTAAAGTGTATTTTCTGGTTTCGATTATGACTTGATTGCCACATTTATTACCACCAAATATTTCGGAAAAATTCCACACAGATACAAATAGACCTGGGCTGAAAACAC
- i calJac1.Contig12391 C 0 C 0
- a score=13661.0
- s ponAbe2.chr22 13904753 46 + 46535552 TATCATTT--------Tatttattcattca---------catttattaagaatttgct----------------------------------------------------------------------------------------atatg
- s hg18.chr22 16173861 46 + 49691432 TATCATTT--------Tatttattcattca---------catttattaagaatttgct----------------------------------------------------------------------------------------atatg
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16196272 46 + 50165558 TATCATTT--------Tatttatgcattca---------catttattaagaatttgct----------------------------------------------------------------------------------------atatg
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61984359 63 + 94855758 TATCATTCATATAGAAAATTCATTTATTAAGAatttaataaattaataagaatttgct----------------------------------------------------------------------------------------atatg
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 24023 134 + 45167 TATCATTT--------TATTTACTCATTCA---------TATTTATTAAGAATTTCCTCggccaggtgcggtggctcaagcctgtaatcccagcactttggaggtgggcagatcacgaggtcaagagatcgagaccatcctggccaacatg
- i calJac1.Contig12391 C 0 I 202
- a score=152272.0
- s ponAbe2.chr22 13904799 194 + 46535552 aaaggtaagtctgatgcaaagatgt----atacagactatgatcctagcccataaatagtttgctatctatcaggaaagcaaaactgcagaaacaaataattacaatacaaggcagtatgtgacatgtgtaattagaatggcagaatgtctaaatgaactaaaaggagtgagaagtcagaaaaggcatcctgaaaga---------a
- s hg18.chr22 16173907 203 + 49691432 aaaggtaagtctgatgcaaagatgt----acacagactatgatccttgcccataaatagtttgctatctatcaggaaagcaaaactgcagaaacaaataattacaatacaaggcagtatgtgatatgtataattagaatggcagaatgtctaaatgaactaaaaggagtgagaagtcagaaaaggcctcctgaaagaagtatgtaca
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16196318 203 + 50165558 aaaggtaagtctgatgcaaagatgt----acacagactatgatccttgcccataaatagtttgctatctatcaggaaagcaaaactgcagaaacaaataattacaatacaaggcagtatgtgatatgtataattagaatggcagaatgtctaaatcttttaaaaggagtgagaagtcagaaaaggcctcctgaaaggagtatgtaca
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61984422 202 + 94855758 aaaggtaagtctgatgcaaagatgt----acacagactatgatccttgcccacaaatagtttgctatccatcaggaaagcaaaactgcagaaacaaataattgcaatacaaggcagtatatgatacgtgtaattagaatggcagaatgtctaaatgaactgagaagagtgagaagtcagaaaaggcctcctgaaaaa-gtatgtaca
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 24359 198 + 45167 aaaGGTAAGTCTCATGCAAGGATGTGATCACACAGACTATGATCCTTGTCCATAAATAGTTTGCTACCTATCAGGAAAGCAAAACCACAGAAACAAATCATTGCAATACAAGGCAGTAGGTGATTTGCATCATGAGAACGGCAGAAAGTCTAAAAGAACTAAGAAGAGTGAGAAGTCGGAAAAGGCCTCCCgacaga-g--------
- i calJac1.Contig12391 I 202 I 239
- a score=147493.0
- s ponAbe2.chr22 13904993 198 + 46535552 tggggctttgaaggatgagcaggattcccatctctagggctgggtgaagagctgtttaaactgaatgatgtatgcaaagacagagctcacagaagtccaggtggttagaacacgaggtgtgcagaggggt-gcaggaggaggagacagttgaaaaccagagccaggaaaggCTTCAATGCTAAGTTATGAGCTTGAATT
- s hg18.chr22 16174110 198 + 49691432 cggggctttgaaggatgagcaggattctcgtctctagagctgggtgaagagctgtttaaactggatgatatatgcaaagacagagCTCACAGAAGTCCAGGTGGTTAGAACACGAGGTGTGCAGAGGGGT-GCAGGAGGAGGAGACAGTTGAAAACCAGAGCCAGGAAAGCCTTCGACGCTAAGTTATGAGCTTGAATT
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16196521 198 + 50165558 cggggctttgaaggatgagcaggattcccgtctctagagctgggtgaagagctgtttaaactggatgatatatgcaaagacagagCTCACAGAAGTCCAGGTGGTTAGAACACGAGGTGTGCAGAGGGGT-GCAGGAGGAGGAGACAGTTGAAAACCAGAGCCAGGAAAGCCTTCAATGCTAAGTTATGAGCTTGAATT
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61984624 196 + 94855758 ccgggctttgaagggtgagcaggaTTCCCATCACTAGAGCTGGGTAAAGAGCTGTTTAAACTGGATGATGTATGCAAAGACAGAGCTCGCAGAAGTCCACGTGATTAGAGCATGAAGTGTGCAGAGGGGT-GCAGGAGGAGGAGACAGTTGAAAACCAGAGCCAGGAAAGCCTTCAATGCT--GTTATGAGCTTGAATT
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 24796 199 + 45167 CGGGGCTGTGAAGGATGAGCAGAATCTCCATGGCTAGAGCTGGGTAAAGAGCAGTTTAAGCTGAGTGGTGCATGCAAAGACAGAGCTCGCGGAAGCCCAGGTGGTTAGAACACGAGGTGGGCAGGGGGGCAGGGGGAGGAGGAGACAGTTGGAAACCAGAGCCAGGAAAGCCTTAAATGCTGAATTGTGAGCTTGCATT
- i calJac1.Contig12391 I 239 I 186
- a score=133022.0
- s ponAbe2.chr22 13905191 201 + 46535552 TTGTATGT---------------------------------------------------------------------------------------------------TAGA--------------------CAAGTGGGAGATCTTAAGGTTTCAGAGTAAAAGAACGACATGGCCTTTACTGTGTGATTTGTGATTAGTCAGTGGTTAAGTGTGGGTAGGAGACGCTAGAAGTCATGGGAATAGCCCAGGCGTGAAGTAAGGAGGCTGAAATTAGGCAGTAGCATTAGAAATGGAAAGGGTATAGATAAGCAAAGGATT
- s hg18.chr22 16174308 193 + 49691432 TTGTATGT---------------------------------------------------------------------------------------------------TAGA--------------------CAAGTGGGGGATCTTAAGGTTTCAGAGTAAAAGAACGATGTGGCCTTTACTGTGTGATTTGTGATTAGTCGGTGGTTAAGTGTGGGTAGGAGACGCTAGAAGTCATGGGAATAGCCCAGCCGTGAAGTAAGGAGGCTGAAATTAGGCAGTAGCGTTAGAAATGGAAAGGGTATAGGTAAGC--------
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16196719 193 + 50165558 TTGTATGT---------------------------------------------------------------------------------------------------TAGA--------------------CAAGTGGGAGATCTTAAGGTTTCAGAGTAAAAGAACTATGTGGCCTTTACTGTGTGCTTTGTGATTAGTCGGTGGTTAAGTGTGGGTAGGAGACGCTAGAAGTCATGGGAATAGCCCAGGCGTGAAGTAAGGAGGCTGAAATTAGGCAGTAGCGTTAGAAATGGAAAGGGTATAGGTAAGC--------
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61984820 200 + 94855758 TTGTATG----------------------------------------------------------------------------------------------------TAGA--------------------CAAGTGGGAGATCTTAAGGTTTCAGAGTAAAAAAACGACGTGGCCTTTACTGTGTGATTTGTGATTAGTCGGTGGTGAAGTGTGGGTAGGAGATGCTGGAAGTCATGGGAATAGCCCAGGCATGAAGTAAGGAGGCTGAAATTAGGCAGTAGCGTTAGAAATGGAAAGAGTATAGATAAGCAAAGGATC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 25181 320 + 45167 ttgtgtgtatttttagtagagacggggtttcaccatgttgtccaggatggtctcgatctcttgacctcgtgatccacccgcctctgcctcccaaggtgctgggattatagacgtgagccaccgcgcccggccAAGTAGGAGATCTTAAGGTTTCCGAGTAGAAGAACGACACGGCCTTTACTGTGCAATTTGTGATTAGTCGGTGGTGAAGTGTGGGTAGGAGACGCTACAGGTCACGAGAACAGCCCAGGCGTGAAGTATGGGGGCTGAAATTAGGCAGTAGTGTTAGAGACAGAATGGGTATAAATAAGCAAAGGATT
- i calJac1.Contig12391 I 186 I 375
- a score=29708.0
- s ponAbe2.chr22 13905463 39 + 46535552 TGCGTTGGGATGTGGCTGTTTTCATTTGATGCTGTCAGG
- s hg18.chr22 16174570 39 + 49691432 TGCGTTGGGATGTAGCTGTGTTGATTTGGTGCTGTCAGG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16196981 39 + 50165558 TGCGTTGGGATGTAGCTGTGTTGATTTGGTGCTGTCAGG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61985091 39 + 94855758 CGCGCTGGGATGTAGCCGTGTTGATTTGGTGCTGTCAGG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 25876 39 + 45167 TGTACTGGGATGTGGCTGTGTTGATTTGGCGCTTTCGGG
- i calJac1.Contig12391 I 375 N 0
- a score=314190.0
- s ponAbe2.chr22 13905656 434 + 46535552 ggccaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggcgggcagatcacgaggtcaggagttcaagaccagcctgactaacatgatgaaaccctgtctctactaaaaatacaaaaaattagcctggcgtagtggtgcgcgcctgtaatcccagctactcgggaggctgaagcaggagaatcactcgaacccaggttgtgggaggttgcagtgagccgagatcgcgccattgcactccagcttgggcaacaagagcgaaactccgtctcaaaa----------aaaaggaaagaaaa------------------------------------gaaaaCACCTA--------------GAGGAAAGAAGATAAGAGGC------------------------AAATCTGGCGTCATAGTCACGGAACTGGAAAAGGAGCCAGAGAGAGAATTCAAAGACAAAATaattattactaatgttggtgagtgtttatgatcccagcac
- s calJac1.Contig12391 25501 509 + 45167 ggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaagagatcgagaccatcctgatcaacatggtgaaatcccgtctctactaaaaatacaaaaaattagctgggcatggtggtgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggc-ggaggttgtggtgagccgagatcgcgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaa---aaaaaaaaaaaGCAAAGGATTATAAAAGATTTGTTAACTATTTGGACATGGAAGCCTGAGGACGCATCAAACGTGCTTTCCTGAGGTGATGTACTGGGATGTGGCTGTGTTGATTTGGCGCTTTCGGGACCTGGGGTCATAG----GGAACTGGAAAAGGAGCCAGACAGAGAATTCAAA-ACGAAACCATGACTACTAACGTTGGCGAGTATTTCTGATCAaggcgc
- i calJac1.Contig12391 N 0 C 0
- s rheMac2.chr10 61985283 458 + 94855758 ggccaggcacagtggctcgcgcctgtaatcctagcactttgggaggccaaggcgggcagatcacaaggtcaggagtttgagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaaattagctgggtgtggtggtgggcacctgtaatcccagctacttgggagactgaagcaggagaatcacttgaatccaggttgctgggggttgcagtgagccaagatcacgccattgcactccagtctgggcaacaagagcgaaactccgtctccaaaaaaaaaaaaaaaaagaaagaaagaaagaaaga----------------------aagaatgaaaACACATA--------------GAGAAAAGAAGGTAAGAGGC------------------------AAATCTGGGGTCATAGTCAGGGAACTGAAAGAGGAGCCAAAGAGAGAATTCAAAGACAAAATaattatgactaatgttggtgactgtttatgatcccggcac
- i rheMac2.chr10 C 0 C 0
- s panTro2.chr22 16197174 439 + 50165558 ggccaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggcgggcagatcacgaggtcaggagttcaagaccagcctgaccaacatgatgaaaccctgtctctaccaaaaatgcaaaaaattagcctggcgtagtggtgtgcgcctgtaatcccagctactcaggaggctgaagcaggagaatcacttgaacccaggttgctggaggttgcagtgagctgagatcgcgccattgcactccagcttgggcaacaagagtgaaactctgtctcaaaa-----aaaagaaaagaaaagaaga------------------------------------gaaaaCACCTA--------------GAGGGAAGAAGATAAGAGGC------------------------AAATCTGGGGTCATAGTCAGGGAACTGGAAAACGAGCCAGAGAGAGAATTCAAAGACAAaataattattacttatgttggtgagtgtttatgaccccagcac
- i panTro2.chr22 C 0 C 0
- s hg18.chr22 16174763 444 + 49691432 ggccaggtgcagtggctcacgcctgtaatcctagcactttgggaggccgaggcgggcagatcacgacgtcgggagttcaagaccagcctgaccaacatgatgaaaccctgtctctaccaaaaatgcaaaaaattagcctggcgtagtggtgtgcgcctgtaatcccagctactcaggaggctgaagcaggagaatcacttgaacccaggttgctggaggttgcagtgagctgagatcgcaccatcgcactccagcttgggcagcaagagtgaaactctgtctcaaaaaaaagaaaagaaaagaaaagaaaa------------------------------------gaaaaCACCTA--------------GAGGAAAGAAGATAAGAGGC------------------------AAATCTGGGGTCATAGTCAGGGAACTGGAAAACGAGCCAGAGAGAGAATTCAAAGACAAaataattattacttatgttggtgagtgtttatgaccccagcac
- i hg18.chr22 C 0 C 0
- a score=143419.0
- s ponAbe2.chr22 13906090 178 + 46535552 tatcctcctaagtgacgtccatgcattcatgcatttgatcctcaccacataatgaggaaagtaccattacctgaagaaagtgagagccagagagcttaagcctcttgcccaagctcgcacggcaaggctcagagcccggagtcctacacaggcagcatgagtccggCCCA-TCTGCCTC
- s hg18.chr22 16175207 179 + 49691432 tatcctcctaagtgctgtccatgcattcatgcacttgatcctcaccacataatgaggaaagtaccattacctgaagaaagtgagagccagagagcttaagcctcttgcccaagctcgcgcggcaaggctcagagcccggagtcctacacaggcagcatgagtccagCCCATTCTGCCTC
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16197613 179 + 50165558 tatcctcctaagtgctgtccatgcattcatgcatttgatcctcaccacataatgaggaaagtaccattacctgaagaaagtgagagccagagaacttaagcctcttgcccaagctcgcgcggcaaggctcagagcccggagtcctacacaggcagcatgagtccagCCCATTCTGCCTC
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61985741 179 + 94855758 tatcctcctaagtgctgtccatgcattcatgtatttgatcctcaccatgtaatgaaaaaagtaccatgacccgaagaaagtgagagccagagagcttaagcctcttgcccaagctcgcgcagcaaggctcagagcctggagtcctacacaggcagcatgaatccggCCCATTCTGCCTC
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 26010 170 + 45167 tatcctcc-aaatgctgtccgtgcattggtgcgtc--accctcaccacgtaatgaggcaggtaccattacctgaggaaagtgagagccagaaagcttaagcatcttgcccaagctcaggaggcaaggctcagagcccagagtcgtaca----cagtgtgaatctggcCAA-TATGCCT-
- i calJac1.Contig12391 C 0 I 1
- a score=42027.0
- s ponAbe2.chr22 13906268 53 + 46535552 TAAAGTCAGGGTAGAGGGCTGGGCCACTGAAATCAAGGGATAAAAAAGTTCGG
- s hg18.chr22 16175386 53 + 49691432 TAAAGTCAGGGTAGAGGGCTGAGCCACTGAAATCAAGGGATAAAAAAGTTCAG
- i hg18.chr22 C 0 C 0
- s panTro2.chr22 16197792 53 + 50165558 TAAAGTCAGGGTAGAGGGCTGGGCCACTGAAATCAAGGGATAAAAAAGTTCAG
- i panTro2.chr22 C 0 C 0
- s rheMac2.chr10 61985920 46 + 94855758 TAAAGTCAGGGTAAAGGGCTG-------GAAATCAAGGGATAAAAAAGTTCAG
- i rheMac2.chr10 C 0 C 0
- s calJac1.Contig12391 26181 53 + 45167 TAAGGTCAGGGTAGAGGGCTGGGGCACCAAAATCAAGGGATAAGAAAGTTCAG