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/test-data/1_2_intersect_priority_0.vcf

https://bitbucket.org/cistrome/cistrome-harvard/
Unknown | 1381 lines | 1381 code | 0 blank | 0 comment | 0 complexity | e929681e12136298dcf9aefaf2b458ab MD5 | raw file
    

  1. ##fileformat=VCFv4.0
    2. 

  2. ##vcfPytools=intersect /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_17.dat, /Users/rc/work/galaxy_lims/galaxy-central/database/files/000/dataset_18.dat
    3. 

  3. #CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	chr10	chr11
    4. 

  4. chr10	131337	.	A	G	56.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48	PL:DP:SP:GT:GQ	89,12,0:4:0:1/1:72
    5. 

  5. chr10	255907	.	T	G	19.1	.	DP=45;AF1=0.5;CI95=0.5,0.5;DP4=18,6,0,9;MQ=49;PV4=0.00013,0.00033,0.033,0.2	PL:DP:SP:GT:GQ	49,0,255:33:39:0/1:52
    6. 

  6. chr10	282897	.	C	T	60	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=48	PL:DP:SP:GT:GQ	93,33,0:11:0:1/1:99
    7. 

  7. chr10	292927	.	C	A	10.2	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45	PL:DP:SP:GT:GQ	41,6,0:2:0:1/1:49
    8. 

  8. chr10	294953	.	A	G	17.1	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	49,9,0:3:0:1/1:63
    9. 

  9. chr10	329425	.	T	C	34	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=48;PV4=1,0.38,0.18,0.012	PL:DP:SP:GT:GQ	64,0,54:9:0:0/1:57
    10. 

  10. chr10	373048	.	T	C	68	.	DP=51;AF1=0.5;CI95=0.5,0.5;DP4=15,12,11,4;MQ=49;PV4=0.33,1.6e-13,0.054,1	PL:DP:SP:GT:GQ	98,0,255:42:5:0/1:99
    11. 

  11. chr10	395463	.	G	A	66	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,0,27;MQ=49	PL:DP:SP:GT:GQ	99,81,0:27:0:1/1:99
    12. 

  12. chr10	430502	.	C	G	22	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=3,12,7,0;MQ=48;PV4=0.0007,0.022,0.0017,1	PL:DP:SP:GT:GQ	52,0,234:22:32:0/1:55
    13. 

  13. chr10	445061	.	C	T	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=47	PL:DP:SP:GT:GQ	255,87,0:29:0:1/1:99
    14. 

  14. chr10	459940	.	G	A	36.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	69,12,0:4:0:1/1:72
    15. 

  15. chr10	518547	.	ACTCT	ACT	99	.	INDEL;DP=18;AF1=1;CI95=1,1;DP4=0,0,0,15;MQ=50	PL:DP:SP:GT:GQ	249,45,0:15:0:1/1:99
    16. 

  16. chr10	1052950	.	G	A	83	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,0,10,0;MQ=48;PV4=1,8.3e-05,7.4e-07,1	PL:DP:SP:GT:GQ	113,0,228:26:0:0/1:99
    17. 

  17. chr10	1061862	.	A	G	37	.	DP=60;AF1=0.5;CI95=0.5,0.5;DP4=2,21,5,3;MQ=49;PV4=0.0056,3.9e-07,3e-06,1	PL:DP:SP:GT:GQ	67,0,255:31:22:0/1:70
    18. 

  18. chr10	1142208	.	T	C	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,1,25;MQ=49	PL:DP:SP:GT:GQ	153,78,0:26:0:1/1:99
    19. 

  19. chr10	1230968	.	C	T	67.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=46	PL:DP:SP:GT:GQ	100,12,0:4:0:1/1:72
    20. 

  20. chr10	3054036	.	T	C	52.1	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	85,18,0:6:0:1/1:90
    21. 

  21. chr10	3143643	.	A	C	11.3	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	43,9,0:3:0:1/1:63
    22. 

  22. chr10	3145906	.	A	C	60	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=7,0,6,0;MQ=47;PV4=1,0.0016,0.0043,1	PL:DP:SP:GT:GQ	90,0,174:13:0:0/1:93
    23. 

  23. chr10	3155237	.	A	G	91	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=48	PL:DP:SP:GT:GQ	124,30,0:10:0:1/1:99
    24. 

  24. chr10	3155540	.	A	G	99	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=48	PL:DP:SP:GT:GQ	132,30,0:10:0:1/1:99
    25. 

  25. chr10	3155753	.	G	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=45	PL:DP:SP:GT:GQ	133,15,0:5:0:1/1:75
    26. 

  26. chr10	3161131	.	C	T	18	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	50,9,0:3:0:1/1:63
    27. 

  27. chr10	3171995	.	G	T	72	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=50	PL:DP:SP:GT:GQ	105,27,0:9:0:1/1:99
    28. 

  28. chr10	3715278	.	T	C	9.31	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=26	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    29. 

  29. chr10	5026052	.	A	G	26	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	58,9,0:3:0:1/1:63
    30. 

  30. chr10	5139685	.	G	A	50.1	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49	PL:DP:SP:GT:GQ	83,18,0:6:0:1/1:90
    31. 

  31. chr10	5435918	.	G	A	75	.	DP=47;AF1=0.9999;CI95=0.5,1;DP4=1,1,9,1;MQ=48;PV4=0.32,1,0.053,1	PL:DP:SP:GT:GQ	105,3,0:12:5:1/1:41
    32. 

  32. chr10	5437365	.	A	G	16.1	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=7,8,1,4;MQ=49;PV4=0.6,0.00011,0.047,1	PL:DP:SP:GT:GQ	46,0,255:20:2:0/1:49
    33. 

  33. chr10	5471122	.	T	C	9.69	.	DP=10;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	38,0,2:4:0:0/1:3
    34. 

  34. chr10	5471251	.	T	G	3.54	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.43,0.21,1	PL:DP:SP:GT:GQ	31,0,32:4:0:0/1:31
    35. 

  35. chr10	5667066	.	C	A	19.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	51,6,0:2:0:1/1:49
    36. 

  36. chr10	5693379	.	A	G	20.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=46	PL:DP:SP:GT:GQ	52,6,0:2:0:1/1:49
    37. 

  37. chr10	5781969	.	A	T	99	.	DP=51;AF1=1;CI95=1,1;DP4=0,1,23,22;MQ=48;PV4=1,0.3,0.26,1	PL:DP:SP:GT:GQ	254,113,0:46:0:1/1:99
    38. 

  38. chr10	5790420	.	T	C	99	.	DP=51;AF1=1;CI95=1,1;DP4=1,0,17,25;MQ=49;PV4=0.42,0.046,0.29,1	PL:DP:SP:GT:GQ	237,97,0:43:0:1/1:99
    39. 

  39. chr10	5804633	.	TTC	TTCTC	99	.	INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,5;MQ=50;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	145,0,108:9:0:0/1:99
    40. 

  40. chr10	5978411	.	T	C	3.54	.	DP=34;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,3;MQ=50;PV4=0.4,0.05,0.25,1	PL:DP:SP:GT:GQ	31,0,37:5:0:0/1:33
    41. 

  41. chr10	6063674	.	T	C	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,0,29;MQ=46	PL:DP:SP:GT:GQ	183,87,0:29:0:1/1:99
    42. 

  42. chr10	6148059	.	A	G	19	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	51,9,0:3:0:1/1:63
    43. 

  43. chr10	6156118	.	T	C	92	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48	PL:DP:SP:GT:GQ	125,39,0:13:0:1/1:99
    44. 

  44. chr10	6258015	.	T	C	73	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=49	PL:DP:SP:GT:GQ	106,54,0:18:0:1/1:99
    45. 

  45. chr10	6258052	.	G	A	97	.	DP=36;AF1=1;CI95=1,1;DP4=0,0,18,0;MQ=48	PL:DP:SP:GT:GQ	130,54,0:18:0:1/1:99
    46. 

  46. chr10	6335597	.	C	T	23	.	DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0078,0.012,0.12	PL:DP:SP:GT:GQ	53,0,76:5:0:0/1:56
    47. 

  47. chr10	6335700	.	G	A	99	.	DP=14;AF1=1;CI95=0.5,1;DP4=1,0,7,6;MQ=46;PV4=1,0.27,0.15,1	PL:DP:SP:GT:GQ	204,10,0:14:0:1/1:60
    48. 

  48. chr10	7285632	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=43	PL:DP:SP:GT:GQ	255,33,0:11:0:1/1:99
    49. 

  49. chr10	7318803	.	T	C	99	.	DP=11;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=45;PV4=1,1,0.017,0.22	PL:DP:SP:GT:GQ	160,5,0:9:0:1/1:46
    50. 

  50. chr10	7605101	.	A	G	77.1	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=49	PL:DP:SP:GT:GQ	110,21,0:7:0:1/1:84
    51. 

  51. chr10	7618686	.	T	G	26.5	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=50	PL:DP:SP:GT:GQ	59,12,0:4:0:1/1:72
    52. 

  52. chr10	7763661	.	A	G	99	.	DP=47;AF1=1;CI95=1,1;DP4=0,0,8,8;MQ=49	PL:DP:SP:GT:GQ	161,48,0:16:0:1/1:99
    53. 

  53. chr10	7773976	.	A	G	99	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=44	PL:DP:SP:GT:GQ	255,66,0:22:0:1/1:99
    54. 

  54. chr10	7788495	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=44	PL:DP:SP:GT:GQ	181,24,0:8:0:1/1:96
    55. 

  55. chr10	7866268	.	C	G	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,23,2;MQ=45	PL:DP:SP:GT:GQ	252,75,0:25:0:1/1:99
    56. 

  56. chr10	8006644	.	A	G	36	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,0,0,9;MQ=48;PV4=2e-06,3.5e-17,6.7e-07,1	PL:DP:SP:GT:GQ	66,0,230:22:57:0/1:69
    57. 

  57. chr10	8093034	.	G	T	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,1,13,2;MQ=47;PV4=0.19,1,0.098,0.22	PL:DP:SP:GT:GQ	197,29,0:16:0:1/1:99
    58. 

  58. chr10	8093185	.	T	C	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46	PL:DP:SP:GT:GQ	146,24,0:8:0:1/1:96
    59. 

  59. chr10	8111621	.	C	T	19.1	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,4;MQ=49;PV4=0.43,0.12,0.13,1	PL:DP:SP:GT:GQ	49,0,84:7:0:0/1:52
    60. 

  60. chr10	9765758	.	A	G	15.9	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	47,6,0:2:0:1/1:49
    61. 

  61. chr10	11299735	.	A	T	42.3	.	DP=38;AF1=0.5336;CI95=0.5,1;DP4=0,1,3,2;MQ=49;PV4=1,0.16,0.29,1	PL:DP:SP:GT:GQ	72,0,9:6:0:0/1:12
    62. 

  62. chr10	11356093	.	TTTT	TTTTGTTT	99	.	INDEL;DP=42;AF1=0.95;CI95=0.5,1;DP4=1,2,11,15;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	255,15,15:29:0:1/1:10
    63. 

  63. chr10	11356094	.	TTT	TTTGTT	99	.	INDEL;DP=43;AF1=0.5;CI95=0.5,0.5;DP4=1,2,5,0;MQ=50;PV4=0.11,1,1,1	PL:DP:SP:GT:GQ	149,0,70:8:10:0/1:73
    64. 

  64. chr10	11356095	.	TT	TTGT	70.5	.	INDEL;DP=41;AF1=0.5;CI95=0.5,0.5;DP4=1,6,5,1;MQ=50;PV4=0.029,1,1,1	PL:DP:SP:GT:GQ	108,0,118:13:15:0/1:99
    65. 

  65. chr10	11789382	.	G	A	99	.	DP=57;AF1=1;CI95=1,1;DP4=0,1,30,20;MQ=49;PV4=0.41,0.21,0.29,1	PL:DP:SP:GT:GQ	251,127,0:51:0:1/1:99
    66. 

  66. chr10	11789511	.	C	G	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,4,31;MQ=49	PL:DP:SP:GT:GQ	205,105,0:35:0:1/1:99
    67. 

  67. chr10	11797467	.	G	A	99	.	DP=25;AF1=0.7303;CI95=0.5,1;DP4=0,2,2,15;MQ=47;PV4=1,0.16,0.1,1	PL:DP:SP:GT:GQ	153,0,2:19:0:0/1:3
    68. 

  68. chr10	11978499	.	T	G	49	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	82,24,0:8:0:1/1:96
    69. 

  69. chr10	12191620	.	C	A	32	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,0,7;MQ=48;PV4=0.00025,0.00053,0.0011,1	PL:DP:SP:GT:GQ	62,0,222:18:36:0/1:65
    70. 

  70. chr10	12198019	.	G	A	99	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,10;MQ=46;PV4=1,0.043,6.9e-16,1	PL:DP:SP:GT:GQ	179,0,186:18:0:0/1:99
    71. 

  71. chr10	12200125	.	C	T	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45	PL:DP:SP:GT:GQ	133,21,0:7:0:1/1:84
    72. 

  72. chr10	12202866	.	A	T	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,21,0;MQ=47	PL:DP:SP:GT:GQ	154,63,0:21:0:1/1:99
    73. 

  73. chr10	12209752	.	T	C	99	.	DP=47;AF1=0.5;CI95=0.5,0.5;DP4=10,12,9,14;MQ=49;PV4=0.77,7.1e-16,0.22,1	PL:DP:SP:GT:GQ	142,0,255:45:1:0/1:99
    74. 

  74. chr10	12292344	.	A	G	78	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,15;MQ=48;PV4=1,2.1e-13,6.2e-06,0.3	PL:DP:SP:GT:GQ	108,0,217:27:0:0/1:99
    75. 

  75. chr10	12858045	.	G	A	99	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=6,0,6,0;MQ=47;PV4=1,6e-05,0,1	PL:DP:SP:GT:GQ	132,0,169:12:0:0/1:99
    76. 

  76. chr10	12858409	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=44	PL:DP:SP:GT:GQ	213,39,0:13:0:1/1:99
    77. 

  77. chr10	12867598	.	C	G	81	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=12,6,8,4;MQ=50;PV4=1,2.5e-07,0.01,1	PL:DP:SP:GT:GQ	111,0,255:30:0:0/1:99
    78. 

  78. chr10	13100381	.	A	G	41	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,2,5,0;MQ=47;PV4=0.17,0.11,0.35,0.16	PL:DP:SP:GT:GQ	71,0,101:9:8:0/1:74
    79. 

  79. chr10	13214812	.	A	G	23	.	DP=9;AF1=0.5003;CI95=0.5,0.5;DP4=0,1,0,6;MQ=47;PV4=1,0.0037,0.31,1	PL:DP:SP:GT:GQ	53,0,29:7:0:0/1:32
    80. 

  80. chr10	13237015	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	155,40,0:21:0:1/1:99
    81. 

  81. chr10	13275514	.	A	G	33.4	.	DP=17;AF1=1;CI95=0.5,1;DP4=1,0,8,0;MQ=50;PV4=1,1,0.37,1	PL:DP:SP:GT:GQ	66,13,0:9:0:1/1:65
    82. 

  82. chr10	13276179	.	A	G	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=46	PL:DP:SP:GT:GQ	154,24,0:8:0:1/1:96
    83. 

  83. chr10	13337588	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=46	PL:DP:SP:GT:GQ	164,57,0:19:0:1/1:99
    84. 

  84. chr10	13375906	.	T	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=43	PL:DP:SP:GT:GQ	141,15,0:5:0:1/1:75
    85. 

  85. chr10	13541724	.	TA	TAAAACA	99	.	INDEL;DP=30;AF1=0.5;CI95=0.5,0.5;DP4=16,1,7,1;MQ=50;PV4=1,0.14,0.074,0.0027	PL:DP:SP:GT:GQ	166,0,255:25:0:0/1:99
    86. 

  86. chr10	13653675	.	T	C	73	.	DP=53;AF1=0.5;CI95=0.5,0.5;DP4=13,2,0,16;MQ=48;PV4=5.1e-07,0.012,0.0041,1	PL:DP:SP:GT:GQ	103,0,214:31:63:0/1:99
    87. 

  87. chr10	13743391	.	C	A	33	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,6;MQ=48;PV4=1,0.44,0.041,1	PL:DP:SP:GT:GQ	63,0,87:12:0:0/1:66
    88. 

  88. chr10	13782605	.	G	A	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,1,32;MQ=48	PL:DP:SP:GT:GQ	181,99,0:33:0:1/1:99
    89. 

  89. chr10	15014418	.	C	G	44.1	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=47	PL:DP:SP:GT:GQ	77,21,0:7:0:1/1:84
    90. 

  90. chr10	15014440	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,16,0;MQ=47	PL:DP:SP:GT:GQ	155,48,0:16:0:1/1:99
    91. 

  91. chr10	15014698	.	C	T	12.3	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,2;MQ=48;PV4=1,0.13,0.008,1	PL:DP:SP:GT:GQ	42,0,96:5:0:0/1:45
    92. 

  92. chr10	15290696	.	C	T	99	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=1,12,0,10;MQ=46;PV4=1,0.17,0.0046,1	PL:DP:SP:GT:GQ	129,0,201:23:0:0/1:99
    93. 

  93. chr10	15713541	.	T	C	60.5	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45	PL:DP:SP:GT:GQ	93,12,0:4:0:1/1:72
    94. 

  94. chr10	15729923	.	C	T	99	.	DP=37;AF1=1;CI95=1,1;DP4=0,0,33,0;MQ=47	PL:DP:SP:GT:GQ	147,99,0:33:0:1/1:99
    95. 

  95. chr10	16797033	.	A	G	82	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,0,21;MQ=48;PV4=1,0.011,0.23,1	PL:DP:SP:GT:GQ	115,29,0:22:0:1/1:99
    96. 

  96. chr10	16967401	.	C	T	13	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    97. 

  97. chr10	16979751	.	T	A	23	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=9,5,0,7;MQ=49;PV4=0.0071,4.6e-05,0.014,1	PL:DP:SP:GT:GQ	53,0,255:21:21:0/1:56
    98. 

  98. chr10	17151714	.	CTCTTC	CTC	5.8	.	INDEL;DP=23;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,0,2;MQ=50;PV4=0.33,0.5,1,1	PL:DP:SP:GT:GQ	42,0,28:3:0:0/1:31
    99. 

  99. chr10	17156151	.	A	G	43.4	.	DP=18;AF1=0.5554;CI95=0.5,1;DP4=0,2,5,1;MQ=49;PV4=0.11,1,0.073,0.32	PL:DP:SP:GT:GQ	73,0,7:8:10:0/1:10
    100. 

  100. chr10	17157630	.	C	T	99	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=2,9,4,23;MQ=49;PV4=1,4.7e-10,0.012,0.018	PL:DP:SP:GT:GQ	180,0,213:38:0:0/1:99
    101. 

  101. chr10	17199419	.	C	G	63	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43	PL:DP:SP:GT:GQ	95,9,0:3:0:1/1:63
    102. 

  102. chr10	17216556	.	C	T	92	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=47	PL:DP:SP:GT:GQ	125,33,0:11:0:1/1:99
    103. 

  103. chr10	17645814	.	C	T	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=45	PL:DP:SP:GT:GQ	138,15,0:5:0:1/1:75
    104. 

  104. chr10	17646088	.	T	C,A	9.93	.	DP=13;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,1,0.12,0.073	PL:DP:SP:GT:GQ	66,28,37,29,0,46:6:0:1/1:5
    105. 

  105. chr10	18138639	.	A	G	98.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=44	PL:DP:SP:GT:GQ	131,15,0:5:0:1/1:75
    106. 

  106. chr10	18242304	.	T	C	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,8,15;MQ=46	PL:DP:SP:GT:GQ	255,69,0:23:0:1/1:99
    107. 

  107. chr10	18439747	.	C	T	51.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=46	PL:DP:SP:GT:GQ	84,12,0:4:0:1/1:72
    108. 

  108. chr10	18596796	.	A	T	11.1	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	42,6,0:2:0:1/1:49
    109. 

  109. chr10	18903605	.	A	C	29	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45	PL:DP:SP:GT:GQ	61,9,0:3:0:1/1:63
    110. 

  110. chr10	18931512	.	T	C	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,1,0,20;MQ=44;PV4=1,1,0.0023,1	PL:DP:SP:GT:GQ	222,47,0:21:0:1/1:99
    111. 

  111. chr10	18937579	.	AAAGAAG	AAAGAAGAAG	99	.	INDEL;DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	140,0,23:5:0:0/1:26
    112. 

  112. chr10	20462052	.	A	AGTCGTCT	12.7	.	INDEL;DP=8;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    113. 

  113. chr10	20506418	.	G	A	99	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=18,11,11,12;MQ=48;PV4=0.4,5.8e-12,7.3e-17,1	PL:DP:SP:GT:GQ	207,0,255:52:4:0/1:99
    114. 

  114. chr10	20534333	.	A	G	99	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=22,11,9,4;MQ=48;PV4=1,5.1e-06,2.8e-15,0.003	PL:DP:SP:GT:GQ	200,0,255:46:0:0/1:99
    115. 

  115. chr10	20568524	.	T	C	58.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    116. 

  116. chr10	21120116	.	A	G	99	.	DP=24;AF1=1;CI95=1,1;DP4=1,0,20,0;MQ=46;PV4=1,0.24,0.15,1	PL:DP:SP:GT:GQ	138,31,0:21:0:1/1:99
    117. 

  117. chr10	21141469	.	T	C	45	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=50	PL:DP:SP:GT:GQ	78,24,0:8:0:1/1:96
    118. 

  118. chr10	21176945	.	G	A	9.53	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	39,3,0:1:0:1/1:41
    119. 

  119. chr10	21178780	.	A	G	43	.	DP=15;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,5,0;MQ=48;PV4=0.29,0.3,0.081,1	PL:DP:SP:GT:GQ	73,0,33:7:0:0/1:36
    120. 

  120. chr10	21414892	.	C	G	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,3,28;MQ=49	PL:DP:SP:GT:GQ	201,93,0:31:0:1/1:99
    121. 

  121. chr10	22171185	.	A	C	6.98	.	DP=18;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,3,0;MQ=48;PV4=1,0.35,1,0.33	PL:DP:SP:GT:GQ	36,0,62:7:0:0/1:39
    122. 

  122. chr10	22830719	.	G	C	99	.	DP=35;AF1=0.8277;CI95=0.5,1;DP4=2,1,21,7;MQ=48;PV4=1,0.046,0.098,1	PL:DP:SP:GT:GQ	201,0,1:31:0:1/1:5
    123. 

  123. chr10	22898553	.	T	G	12.3	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=8,0,4,0;MQ=48;PV4=1,0.039,0.047,1	PL:DP:SP:GT:GQ	42,0,146:12:0:0/1:45
    124. 

  124. chr10	24786291	.	A	G	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    125. 

  125. chr10	24889901	.	T	G	94	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,0,19;MQ=47;PV4=1,0.38,0.15,1	PL:DP:SP:GT:GQ	127,33,0:20:0:1/1:99
    126. 

  126. chr10	25888180	.	A	G	95.4	.	DP=43;AF1=1;CI95=0.5,1;DP4=0,1,9,2;MQ=48;PV4=0.25,0.45,0.19,1	PL:DP:SP:GT:GQ	128,13,0:12:0:1/1:65
    127. 

  127. chr10	25998967	.	T	G	12.3	.	DP=4;AF1=0.501;CI95=0.5,0.5;DP4=2,0,2,0;MQ=48;PV4=1,1,0.019,1	PL:DP:SP:GT:GQ	42,0,24:4:0:0/1:27
    128. 

  128. chr10	26357748	.	G	A	99	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,8,7;MQ=48;PV4=0.75,7.4e-08,7.6e-11,1	PL:DP:SP:GT:GQ	213,0,255:37:1:0/1:99
    129. 

  129. chr10	26463130	.	C	A	99	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=7,6,8,7;MQ=49;PV4=1,3.4e-16,0.024,1	PL:DP:SP:GT:GQ	161,0,255:28:0:0/1:99
    130. 

  130. chr10	26463507	.	A	G	9.31	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    131. 

  131. chr10	26781388	.	G	A	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,0,18;MQ=48	PL:DP:SP:GT:GQ	150,54,0:18:0:1/1:99
    132. 

  132. chr10	27009334	.	A	G	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,0,22;MQ=48	PL:DP:SP:GT:GQ	141,66,0:22:0:1/1:99
    133. 

  133. chr10	27405096	.	A	G	38	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=10,1,4,1;MQ=49;PV4=1,0.0018,0.0067,1	PL:DP:SP:GT:GQ	68,0,246:16:0:0/1:71
    134. 

  134. chr10	27409555	.	G	A	37.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49	PL:DP:SP:GT:GQ	70,12,0:4:0:1/1:72
    135. 

  135. chr10	27423744	.	T	C	42	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,2,5,3;MQ=49;PV4=0.61,4.2e-09,1,0.33	PL:DP:SP:GT:GQ	72,0,255:18:2:0/1:75
    136. 

  136. chr10	27456003	.	G	A	23	.	DP=27;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48	PL:DP:SP:GT:GQ	55,9,0:3:0:1/1:63
    137. 

  137. chr10	27506854	.	C	T	63.1	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	96,21,0:7:0:1/1:84
    138. 

  138. chr10	27536428	.	T	C	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,10,8;MQ=31	PL:DP:SP:GT:GQ	255,54,0:18:0:1/1:99
    139. 

  139. chr10	27577568	.	G	A	53.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47	PL:DP:SP:GT:GQ	86,15,0:5:0:1/1:75
    140. 

  140. chr10	27629880	.	T	C	29.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=46	PL:DP:SP:GT:GQ	61,6,0:2:0:1/1:49
    141. 

  141. chr10	27687775	.	T	C	47.3	.	DP=21;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=50	PL:DP:SP:GT:GQ	80,15,0:5:0:1/1:75
    142. 

  142. chr10	27687965	.	A	G	99	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=11,4,5,6;MQ=47;PV4=0.23,1,1.1e-12,1	PL:DP:SP:GT:GQ	255,0,255:26:6:0/1:99
    143. 

  143. chr10	27692099	.	A	G	98.2	.	DP=17;AF1=0.5207;CI95=0.5,1;DP4=1,0,12,0;MQ=47;PV4=1,0.0035,0.12,1	PL:DP:SP:GT:GQ	128,0,11:13:0:0/1:14
    144. 

  144. chr10	27692371	.	T	G	91	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=48	PL:DP:SP:GT:GQ	124,42,0:14:0:1/1:99
    145. 

  145. chr10	28223886	.	A	C	40	.	DP=26;AF1=0.5006;CI95=0.5,0.5;DP4=3,0,7,0;MQ=48;PV4=1,1,0.0037,1	PL:DP:SP:GT:GQ	70,0,26:10:0:0/1:29
    146. 

  146. chr10	28228865	.	A	G	99	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=14,6,4,7;MQ=47;PV4=0.13,0.00015,1.7e-08,1	PL:DP:SP:GT:GQ	208,0,255:31:9:0/1:99
    147. 

  147. chr10	29760209	.	C	T	81	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=49	PL:DP:SP:GT:GQ	114,36,0:12:0:1/1:99
    148. 

  148. chr10	29822032	.	C	T	99	.	DP=22;AF1=1;CI95=0.5,1;DP4=1,0,11,6;MQ=49;PV4=1,6.3e-06,0.29,0.47	PL:DP:SP:GT:GQ	137,7,0:18:0:1/1:57
    149. 

  149. chr10	29839787	.	A	G	99	.	DP=44;AF1=1;CI95=1,1;DP4=0,1,19,17;MQ=48;PV4=0.49,1,0.28,1	PL:DP:SP:GT:GQ	255,91,0:37:0:1/1:99
    150. 

  150. chr10	29839864	.	A	C	99	.	DP=42;AF1=1;CI95=1,1;DP4=2,0,19,16;MQ=47;PV4=0.5,1,0.39,1	PL:DP:SP:GT:GQ	255,75,0:37:3:1/1:99
    151. 

  151. chr10	29921156	.	T	C	10.4	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	40,3,0:1:0:1/1:41
    152. 

  152. chr10	30611459	.	C	A	33	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=5,5,0,8;MQ=49;PV4=0.036,0.0066,0.015,1	PL:DP:SP:GT:GQ	63,0,233:18:14:0/1:66
    153. 

  153. chr10	30669878	.	G	C	38.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=43	PL:DP:SP:GT:GQ	70,6,0:2:0:1/1:49
    154. 

  154. chr10	30749895	.	G	A	62.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=46	PL:DP:SP:GT:GQ	95,12,0:4:0:1/1:72
    155. 

  155. chr10	30993448	.	G	A	58.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    156. 

  156. chr10	31005822	.	C	T	76.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43	PL:DP:SP:GT:GQ	109,12,0:4:0:1/1:72
    157. 

  157. chr10	31134557	.	T	C	43.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	76,12,0:4:0:1/1:72
    158. 

  158. chr10	31803516	.	G	A	17.7	.	DP=10;AF1=0.5939;CI95=0.5,1;DP4=1,0,2,1;MQ=47;PV4=1,1,0.4,1	PL:DP:SP:GT:GQ	47,0,5:4:0:0/1:7
    159. 

  159. chr10	32103171	.	G	A	8.64	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=47;PV4=1,0.013,0.31,0.065	PL:DP:SP:GT:GQ	38,0,65:7:0:0/1:41
    160. 

  160. chr10	33552696	.	A	G	99	.	DP=54;AF1=1;CI95=1,1;DP4=1,0,35,10;MQ=49;PV4=1,0.012,0.36,1	PL:DP:SP:GT:GQ	192,106,0:46:0:1/1:99
    161. 

  161. chr10	34620220	.	C	T	99	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,4,1,7;MQ=47;PV4=1,0.069,0.0033,0.44	PL:DP:SP:GT:GQ	166,0,149:13:0:0/1:99
    162. 

  162. chr10	34688287	.	G	A	99	.	DP=50;AF1=1;CI95=1,1;DP4=1,1,22,20;MQ=48;PV4=1,0.043,0.043,1	PL:DP:SP:GT:GQ	255,70,0:44:0:1/1:99
    163. 

  163. chr10	35805284	.	A	C	61.3	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47	PL:DP:SP:GT:GQ	94,15,0:5:0:1/1:75
    164. 

  164. chr10	38246545	.	A	G	52	.	DP=21;AF1=0.5005;CI95=0.5,0.5;DP4=0,2,0,10;MQ=48;PV4=1,0.059,1,1	PL:DP:SP:GT:GQ	82,0,27:12:0:0/1:30
    165. 

  165. chr10	38344124	.	C	G	48	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=5,5,2,7;MQ=39;PV4=0.35,0.45,0.00022,1	PL:DP:SP:GT:GQ	78,0,202:19:5:0/1:81
    166. 

  166. chr10	38599101	.	CTT	CTTT	44.5	.	INDEL;DP=9;AF1=0.505;CI95=0.5,0.5;DP4=1,0,2,1;MQ=50;PV4=1,1,1,0.21	PL:DP:SP:GT:GQ	82,0,17:4:0:0/1:20
    167. 

  167. chr10	38934239	.	A	T	7.81	.	DP=5;AF1=0.5025;CI95=0.5,0.5;DP4=1,0,0,3;MQ=48;PV4=0.25,0.031,1,0.18	PL:DP:SP:GT:GQ	37,0,20:4:0:0/1:23
    168. 

  168. chr10	42384737	.	C	T	53	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,8,10,10;MQ=16;PV4=1,0.25,1,1	PL:DP:SP:GT:GQ	83,0,51:36:0:0/1:54
    169. 

  169. chr10	42394484	.	T	C	44	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=8,7,7,7;MQ=17;PV4=1,4.2e-07,1,1	PL:DP:SP:GT:GQ	74,0,74:29:0:0/1:74
    170. 

  170. chr10	42396883	.	A	C	63.5	.	DP=79;AF1=1;CI95=0.5,1;DP4=0,1,6,4;MQ=33;PV4=0.45,0.073,0.095,1	PL:DP:SP:GT:GQ	95,7,0:11:0:1/1:57
    171. 

  171. chr10	43089965	.	G	A	40	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46	PL:DP:SP:GT:GQ	72,9,0:3:0:1/1:63
    172. 

  172. chr10	43209943	.	G	A	99	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,1,2,5;MQ=42;PV4=1,1,0.42,0.15	PL:DP:SP:GT:GQ	170,7,0:8:0:1/1:57
    173. 

  173. chr10	43606687	.	A	G	99	.	DP=56;AF1=0.5;CI95=0.5,0.5;DP4=1,7,16,10;MQ=46;PV4=0.039,0.45,0.0054,0.39	PL:DP:SP:GT:GQ	255,0,74:34:14:0/1:77
    174. 

  174. chr10	43617515	.	T	C	20	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=1,17,0,5;MQ=49;PV4=1,0.085,1.1e-05,0.25	PL:DP:SP:GT:GQ	50,0,234:23:0:0/1:53
    175. 

  175. chr10	43694394	.	A	C	24	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=7,2,5,0;MQ=49;PV4=0.51,0.42,0.032,0.44	PL:DP:SP:GT:GQ	54,0,128:14:3:0/1:57
    176. 

  176. chr10	43883342	.	T	A	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=48	PL:DP:SP:GT:GQ	137,39,0:13:0:1/1:99
    177. 

  177. chr10	44104137	.	G	T	20	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,5,5,0;MQ=49;PV4=0.086,0.098,0.029,0.37	PL:DP:SP:GT:GQ	50,0,182:14:11:0/1:53
    178. 

  178. chr10	45357413	.	A	T	32.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=44	PL:DP:SP:GT:GQ	64,6,0:2:0:1/1:49
    179. 

  179. chr10	45423282	.	C	G	25	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=48;PV4=1,0.064,0.065,1	PL:DP:SP:GT:GQ	55,0,113:7:0:0/1:58
    180. 

  180. chr10	45622885	.	C	T	33.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45	PL:DP:SP:GT:GQ	65,6,0:2:0:1/1:49
    181. 

  181. chr10	45799379	.	TG	TGGG	12.7	.	INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    182. 

  182. chr10	45924023	.	G	A	92.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43	PL:DP:SP:GT:GQ	125,12,0:4:0:1/1:72
    183. 

  183. chr10	46998795	.	A	G	65	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,7,0;MQ=48;PV4=1,0.0058,0.26,0.15	PL:DP:SP:GT:GQ	95,0,134:12:0:0/1:98
    184. 

  184. chr10	46998894	.	G	A	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,13,0,17;MQ=48;PV4=1,3.8e-16,3.8e-06,0.3	PL:DP:SP:GT:GQ	132,0,221:30:0:0/1:99
    185. 

  185. chr10	46999465	.	A	G	34	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=49;PV4=1,0.0044,0.081,0.47	PL:DP:SP:GT:GQ	64,0,100:11:0:0/1:67
    186. 

  186. chr10	46999591	.	CATGAGGGAG	CATGAGGGAGATGAGGGAG	99	.	INDEL;DP=24;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=50;PV4=0.44,1,1,1	PL:DP:SP:GT:GQ	206,11,0:9:0:1/1:66
    187. 

  187. chr10	46999604	.	A	G	12.3	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=49;PV4=1,0.11,0.16,1	PL:DP:SP:GT:GQ	42,0,85:9:0:0/1:45
    188. 

  188. chr10	46999747	.	T	C	80	.	DP=66;AF1=0.5;CI95=0.5,0.5;DP4=10,11,3,13;MQ=49;PV4=0.091,1.1e-09,0.0043,1	PL:DP:SP:GT:GQ	110,0,255:37:10:0/1:99
    189. 

  189. chr10	47000004	.	T	C	99	.	DP=33;AF1=1;CI95=0.5,1;DP4=1,1,11,8;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	217,17,0:21:0:1/1:85
    190. 

  190. chr10	47087608	.	T	C	99	.	DP=44;AF1=0.7303;CI95=0.5,1;DP4=1,1,3,9;MQ=48;PV4=0.51,1,0.096,1	PL:DP:SP:GT:GQ	128,0,2:14:3:0/1:3
    191. 

  191. chr10	47087680	.	C	T	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,9,18;MQ=45	PL:DP:SP:GT:GQ	255,81,0:27:0:1/1:99
    192. 

  192. chr10	47087731	.	C	T	99	.	DP=62;AF1=1;CI95=1,1;DP4=0,0,34,21;MQ=48	PL:DP:SP:GT:GQ	255,166,0:55:0:1/1:99
    193. 

  193. chr10	47728608	.	T	C	47	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=7,4,3,2;MQ=32;PV4=1,1,1,1	PL:DP:SP:GT:GQ	77,0,78:16:0:0/1:77
    194. 

  194. chr10	48386110	.	T	C	99	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=0,6,1,13;MQ=48;PV4=1,4.7e-07,0.00011,1	PL:DP:SP:GT:GQ	144,0,145:20:0:0/1:99
    195. 

  195. chr10	48414570	.	A	G	81	.	DP=23;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,0,18;MQ=47;PV4=0.1,0.00023,0.0076,1	PL:DP:SP:GT:GQ	111,0,29:20:0:0/1:32
    196. 

  196. chr10	49661341	.	A	G	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,22,7;MQ=48	PL:DP:SP:GT:GQ	242,87,0:29:0:1/1:99
    197. 

  197. chr10	50227785	.	T	C	46.5	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48	PL:DP:SP:GT:GQ	79,12,0:4:0:1/1:72
    198. 

  198. chr10	50227927	.	C	A	33.1	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50	PL:DP:SP:GT:GQ	66,21,0:7:0:1/1:84
    199. 

  199. chr10	50691360	.	T	C	65	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=48	PL:DP:SP:GT:GQ	98,24,0:8:0:1/1:96
    200. 

  200. chr10	50724016	.	C	T	7.59	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49	PL:DP:SP:GT:GQ	38,6,0:2:0:1/1:49
    201. 

  201. chr10	50820345	.	C	A	99	.	DP=16;AF1=1;CI95=0.5,1;DP4=0,1,9,4;MQ=48;PV4=0.36,0.15,0.22,1	PL:DP:SP:GT:GQ	152,14,0:14:0:1/1:70
    202. 

  202. chr10	50856652	.	G	A	54.5	.	DP=10;AF1=0.9998;CI95=0.5,1;DP4=0,1,0,5;MQ=47;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	84,2,0:6:0:1/1:37
    203. 

  203. chr10	50902684	.	C	T	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,1,0,30;MQ=46;PV4=1,1,0.088,1	PL:DP:SP:GT:GQ	187,77,0:31:0:1/1:99
    204. 

  204. chr10	50944009	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=42	PL:DP:SP:GT:GQ	182,24,0:8:0:1/1:96
    205. 

  205. chr10	51532367	.	A	G	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,4,10;MQ=29	PL:DP:SP:GT:GQ	164,42,0:14:0:1/1:99
    206. 

  206. chr10	51549496	.	T	C	94	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=8,0,11,1;MQ=48;PV4=1,8.6e-08,8.3e-08,1	PL:DP:SP:GT:GQ	124,0,180:20:0:0/1:99
    207. 

  207. chr10	51549545	.	G	T	97	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,12,1;MQ=49	PL:DP:SP:GT:GQ	130,39,0:13:0:1/1:99
    208. 

  208. chr10	52390836	.	A	G	99	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=46	PL:DP:SP:GT:GQ	150,24,0:8:0:1/1:96
    209. 

  209. chr10	52419433	.	G	A	7.8	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=37	PL:DP:SP:GT:GQ	37,3,0:1:0:1/1:41
    210. 

  210. chr10	52576068	.	G	A	97	.	DP=39;AF1=1;CI95=1,1;DP4=0,1,0,31;MQ=48;PV4=1,1,0.19,1	PL:DP:SP:GT:GQ	130,79,0:32:0:1/1:99
    211. 

  211. chr10	53457421	.	A	G	3.54	.	DP=18;AF1=0.4998;CI95=0.5,0.5;DP4=5,0,3,0;MQ=50;PV4=1,0.059,0.11,0.15	PL:DP:SP:GT:GQ	31,0,80:8:0:0/1:34
    212. 

  212. chr10	54148888	.	C	A	47	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=38	PL:DP:SP:GT:GQ	80,33,0:11:0:1/1:99
    213. 

  213. chr10	54528266	.	G	C	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,6,2;MQ=45	PL:DP:SP:GT:GQ	190,24,0:8:0:1/1:96
    214. 

  214. chr10	54528298	.	G	C	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=45	PL:DP:SP:GT:GQ	159,48,0:16:0:1/1:99
    215. 

  215. chr10	54528353	.	C	G	69.1	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48	PL:DP:SP:GT:GQ	102,21,0:7:0:1/1:84
    216. 

  216. chr10	55719652	.	C	T	56	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50	PL:DP:SP:GT:GQ	89,27,0:9:0:1/1:99
    217. 

  217. chr10	55779909	.	G	C	52	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=5,0,11,0;MQ=49;PV4=1,0.023,0.19,1	PL:DP:SP:GT:GQ	82,0,73:16:0:0/1:75
    218. 

  218. chr10	58118630	.	T	C	29.5	.	DP=49;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,1,0.25,1	PL:DP:SP:GT:GQ	58,0,1:5:0:1/1:5
    219. 

  219. chr10	58119976	.	G	A	51.3	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=48	PL:DP:SP:GT:GQ	84,15,0:5:0:1/1:75
    220. 

  220. chr10	59958956	.	C	A	14.2	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.021,0.092,1	PL:DP:SP:GT:GQ	44,0,99:6:0:0/1:47
    221. 

  221. chr10	60996453	.	G	A	69	.	DP=24;AF1=1;CI95=1,1;DP4=0,1,0,13;MQ=49;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	102,25,0:14:0:1/1:99
    222. 

  222. chr10	61005244	.	G	C	99	.	DP=40;AF1=1;CI95=1,1;DP4=0,0,5,22;MQ=48	PL:DP:SP:GT:GQ	230,81,0:27:0:1/1:99
    223. 

  223. chr10	61083689	.	CAG	CAGTTAG	38.7	.	INDEL;DP=28;AF1=0.5263;CI95=0.5,1;DP4=3,0,17,0;MQ=50;PV4=1,0.0041,1,1	PL:DP:SP:GT:GQ	76,0,10:20:0:0/1:13
    224. 

  224. chr10	61083690	.	AG	AGTTGG	99	.	INDEL;DP=28;AF1=0.5;CI95=0.5,0.5;DP4=4,0,19,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	235,0,37:23:0:0/1:40
    225. 

  225. chr10	61122268	.	TG	TTAG,TGTTAG	99	.	INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=50	PL:DP:SP:GT:GQ	242,47,204,23,0,201:9:0:1/1:96
    226. 

  226. chr10	61311416	.	TAAA	TAA	93.6	.	INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50	PL:DP:SP:GT:GQ	134,18,0:6:0:1/1:90
    227. 

  227. chr10	61552878	.	G	A	4.77	.	DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,1,1,3;MQ=50;PV4=1,0.0038,0.34,0.25	PL:DP:SP:GT:GQ	33,0,31:5:0:0/1:32
    228. 

  228. chr10	61802577	.	TCC	TCCC	99	.	INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50	PL:DP:SP:GT:GQ	187,39,0:13:0:1/1:99
    229. 

  229. chr10	61815335	.	C	A,G	58.1	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	91,21,83,0,4,83:8:0:1/1:84
    230. 

  230. chr10	61819049	.	T	G	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=47	PL:DP:SP:GT:GQ	149,51,0:17:0:1/1:99
    231. 

  231. chr10	62553763	.	A	G	86	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=48	PL:DP:SP:GT:GQ	119,30,0:10:0:1/1:99
    232. 

  232. chr10	63995983	.	C	T	94.8	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,1,2,9;MQ=48;PV4=1,0.27,0.22,1	PL:DP:SP:GT:GQ	127,10,0:12:0:1/1:60
    233. 

  233. chr10	64005711	.	C	T	81.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=46	PL:DP:SP:GT:GQ	114,18,0:6:0:1/1:90
    234. 

  234. chr10	64415184	.	A	G	99	.	DP=46;AF1=1;CI95=1,1;DP4=0,0,32,11;MQ=48	PL:DP:SP:GT:GQ	248,129,0:43:0:1/1:99
    235. 

  235. chr10	64573771	.	C	T	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=43	PL:DP:SP:GT:GQ	233,69,0:23:0:1/1:99
    236. 

  236. chr10	64967445	.	A	T	99	.	DP=49;AF1=1;CI95=1,1;DP4=0,0,23,17;MQ=49	PL:DP:SP:GT:GQ	246,120,0:40:0:1/1:99
    237. 

  237. chr10	69583206	.	G	A	6.23	.	DP=5;AF1=0.505;CI95=0.5,0.5;DP4=0,1,0,3;MQ=50;PV4=1,0.029,0.33,1	PL:DP:SP:GT:GQ	35,0,17:4:0:0/1:20
    238. 

  238. chr10	69934467	.	A	G	40	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=50	PL:DP:SP:GT:GQ	73,24,0:8:0:1/1:96
    239. 

  239. chr10	70051928	.	A	G	99	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=13,9,5,8;MQ=48;PV4=0.31,0.013,5.8e-34,1	PL:DP:SP:GT:GQ	251,0,255:35:5:0/1:99
    240. 

  240. chr10	70143774	.	C	T	46	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,3;MQ=47;PV4=1,0.002,0.064,1	PL:DP:SP:GT:GQ	76,0,82:6:0:0/1:78
    241. 

  241. chr10	70405855	.	A	G	99	.	DP=13;AF1=1;CI95=0.5,1;DP4=0,1,7,4;MQ=48;PV4=0.42,0.25,0.19,1	PL:DP:SP:GT:GQ	160,7,0:12:0:1/1:57
    242. 

  242. chr10	70502288	.	G	A	99	.	DP=76;AF1=0.5;CI95=0.5,0.5;DP4=15,24,17,15;MQ=48;PV4=0.24,4.1e-24,1.9e-13,0.2	PL:DP:SP:GT:GQ	235,0,255:71:6:0/1:99
    243. 

  243. chr10	70525591	.	G	A	12.3	.	DP=4;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=46;PV4=1,0.23,0.0022,1	PL:DP:SP:GT:GQ	42,0,62:4:0:0/1:45
    244. 

  244. chr10	70641860	.	T	C	99	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,1,10;MQ=48	PL:DP:SP:GT:GQ	133,33,0:11:0:1/1:99
    245. 

  245. chr10	70646193	.	C	T	16.1	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=0,13,5,0;MQ=49;PV4=0.00012,0.0016,1.1e-05,1	PL:DP:SP:GT:GQ	46,0,217:18:39:0/1:49
    246. 

  246. chr10	70694171	.	T	A	14.2	.	DP=8;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=44;PV4=1,0.42,0.096,1	PL:DP:SP:GT:GQ	44,0,29:5:0:0/1:32
    247. 

  247. chr10	70725128	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,1,9,3;MQ=45;PV4=0.31,1,0.039,1	PL:DP:SP:GT:GQ	236,22,0:13:0:1/1:88
    248. 

  248. chr10	70748716	.	TG	TGACAG	12.7	.	INDEL;DP=6;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    249. 

  249. chr10	70928380	.	A	C	19.1	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=8,2,0,6;MQ=49;PV4=0.007,0.0015,0.00032,1	PL:DP:SP:GT:GQ	49,0,226:16:22:0/1:52
    250. 

  250. chr10	70992664	.	C	T	78	.	DP=28;AF1=1;CI95=1,1;DP4=1,0,0,23;MQ=49;PV4=0.042,1,0.31,1	PL:DP:SP:GT:GQ	111,56,0:24:0:1/1:99
    251. 

  251. chr10	70992912	.	A	T	99	.	DP=55;AF1=1;CI95=1,1;DP4=3,0,13,30;MQ=48;PV4=0.037,1,0.037,1	PL:DP:SP:GT:GQ	239,70,0:46:14:1/1:99
    252. 

  252. chr10	70992949	.	T	A	93	.	DP=35;AF1=1;CI95=1,1;DP4=0,1,0,29;MQ=48;PV4=1,0.13,0.2,1	PL:DP:SP:GT:GQ	126,61,0:30:0:1/1:99
    253. 

  253. chr10	71016947	.	C	G	20.6	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50	PL:DP:SP:GT:GQ	53,12,0:4:0:1/1:72
    254. 

  254. chr10	71018660	.	T	C	53	.	DP=21;AF1=0.502;CI95=0.5,0.5;DP4=1,1,0,6;MQ=47;PV4=0.25,1,0.35,1	PL:DP:SP:GT:GQ	83,0,21:8:0:0/1:24
    255. 

  255. chr10	71144702	.	G	A	99	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,2,9;MQ=48	PL:DP:SP:GT:GQ	140,33,0:11:0:1/1:99
    256. 

  256. chr10	71392557	.	C	T	55.1	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49	PL:DP:SP:GT:GQ	88,21,0:7:0:1/1:84
    257. 

  257. chr10	71969062	.	G	A	24	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	56,9,0:3:0:1/1:63
    258. 

  258. chr10	72195439	.	T	C	69.1	.	DP=11;AF1=1;CI95=0.5,1;DP4=1,0,9,1;MQ=49;PV4=1,0.18,0.34,1	PL:DP:SP:GT:GQ	100,5,0:11:0:1/1:46
    259. 

  259. chr10	72297567	.	G	A	45	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=0,2,5,0;MQ=48;PV4=0.048,0.17,0.031,1	PL:DP:SP:GT:GQ	75,0,40:7:13:0/1:43
    260. 

  260. chr10	72357713	.	C	T	63	.	DP=5;AF1=0.501;CI95=0.5,0.5;DP4=1,0,4,0;MQ=43;PV4=1,0.34,0.2,0.41	PL:DP:SP:GT:GQ	93,0,24:5:0:0/1:27
    261. 

  261. chr10	72496375	.	A	G	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43	PL:DP:SP:GT:GQ	167,18,0:6:0:1/1:90
    262. 

  262. chr10	72500863	.	C	G	29.6	.	DP=33;AF1=0.5939;CI95=0.5,1;DP4=0,1,5,0;MQ=49;PV4=0.17,0.34,0.35,1	PL:DP:SP:GT:GQ	59,0,5:6:0:0/1:7
    263. 

  263. chr10	72619205	.	C	T	99	.	DP=45;AF1=1;CI95=0.5,1;DP4=1,1,6,9;MQ=49;PV4=1,0.37,0.14,1	PL:DP:SP:GT:GQ	147,7,0:17:0:1/1:57
    264. 

  264. chr10	72633458	.	C	T	59	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,12;MQ=49;PV4=1,1.4e-09,0.053,1	PL:DP:SP:GT:GQ	89,0,184:20:0:0/1:92
    265. 

  265. chr10	73104056	.	A	G	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,1,21;MQ=47	PL:DP:SP:GT:GQ	166,66,0:22:0:1/1:99
    266. 

  266. chr10	73121913	.	A	G	99	.	DP=37;AF1=1;CI95=1,1;DP4=1,0,16,16;MQ=42;PV4=1,1,0.055,1	PL:DP:SP:GT:GQ	255,79,0:33:0:1/1:99
    267. 

  267. chr10	73520632	.	A	C	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=48	PL:DP:SP:GT:GQ	132,27,0:9:0:1/1:99
    268. 

  268. chr10	73578882	.	T	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,1,34;MQ=48	PL:DP:SP:GT:GQ	175,105,0:35:0:1/1:99
    269. 

  269. chr10	73579501	.	AGAGG	AG	10.8	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	48,3,0:1:0:1/1:41
    270. 

  270. chr10	73579979	.	G	A	99	.	DP=35;AF1=0.5;CI95=0.5,0.5;DP4=16,0,16,0;MQ=47;PV4=1,1.3e-05,1.4e-12,0.049	PL:DP:SP:GT:GQ	190,0,233:32:0:0/1:99
    271. 

  271. chr10	74813116	.	A	G	29	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,7,5,1;MQ=47;PV4=0.041,0.19,0.044,1	PL:DP:SP:GT:GQ	59,0,157:15:14:0/1:62
    272. 

  272. chr10	75186107	.	C	T	18.1	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,2,0,4;MQ=48;PV4=0.076,0.3,0.12,1	PL:DP:SP:GT:GQ	48,0,99:10:11:0/1:51
    273. 

  273. chr10	75187502	.	G	A	44	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,7,4,2;MQ=48;PV4=0.091,0.089,0.0045,1	PL:DP:SP:GT:GQ	74,0,144:14:10:0/1:77
    274. 

  274. chr10	75476882	.	A	G	3.55	.	DP=11;AF1=0.5006;CI95=0.5,0.5;DP4=2,0,2,0;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	31,0,25:4:0:0/1:27
    275. 

  275. chr10	75526651	.	T	C	37	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,6;MQ=48;PV4=0.4,0.17,0.46,0.43	PL:DP:SP:GT:GQ	67,0,76:10:0:0/1:69
    276. 

  276. chr10	75574848	.	G	C	15.1	.	DP=8;AF1=0.5;CI95=0.5,0.5;DP4=0,2,2,0;MQ=48;PV4=0.33,0.16,0.065,1	PL:DP:SP:GT:GQ	45,0,68:4:5:0/1:48
    277. 

  277. chr10	75607168	.	T	C	11.4	.	DP=25;AF1=0.508;CI95=0.5,0.5;DP4=0,1,0,3;MQ=49;PV4=1,0.2,0.21,1	PL:DP:SP:GT:GQ	41,0,15:4:0:0/1:18
    278. 

  278. chr10	75607643	.	C	CT	59.4	.	INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	99,9,0:3:0:1/1:63
    279. 

  279. chr10	75607696	.	CAA	CA	99	.	INDEL;DP=15;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=50	PL:DP:SP:GT:GQ	154,42,0:14:0:1/1:99
    280. 

  280. chr10	75673101	.	T	C	72.1	.	DP=39;AF1=0.9966;CI95=0.5,1;DP4=0,1,6,2;MQ=49;PV4=0.33,0.23,0.26,1	PL:DP:SP:GT:GQ	101,1,0:9:0:1/1:23
    281. 

  281. chr10	75842152	.	G	A	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=47	PL:DP:SP:GT:GQ	132,30,0:10:0:1/1:99
    282. 

  282. chr10	75843100	.	T	A	67.1	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	100,21,0:7:0:1/1:84
    283. 

  283. chr10	75863750	.	C	T	61	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,7;MQ=48;PV4=1,0.00017,0.015,0.46	PL:DP:SP:GT:GQ	91,0,143:12:0:0/1:94
    284. 

  284. chr10	76729901	.	T	A	7	.	DP=7;AF1=0.5031;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.077,0.11,0.27	PL:DP:SP:GT:GQ	36,0,19:3:0:0/1:22
    285. 

  285. chr10	76854564	.	C	T	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,1,13,6;MQ=48;PV4=0.35,0.19,0.27,1	PL:DP:SP:GT:GQ	205,29,0:20:0:1/1:99
    286. 

  286. chr10	76855326	.	A	G	9.31	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48	PL:DP:SP:GT:GQ	40,6,0:2:0:1/1:49
    287. 

  287. chr10	76855412	.	G	A	99	.	DP=49;AF1=1;CI95=1,1;DP4=1,0,9,29;MQ=44;PV4=0.26,1,9.9e-05,1	PL:DP:SP:GT:GQ	255,91,0:39:0:1/1:99
    288. 

  288. chr10	76857716	.	A	G	96	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=47	PL:DP:SP:GT:GQ	129,27,0:9:0:1/1:99
    289. 

  289. chr10	77454739	.	A	G	51.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=49	PL:DP:SP:GT:GQ	84,15,0:5:0:1/1:75
    290. 

  290. chr10	78649399	.	C	T	99	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=0,14,0,14;MQ=47;PV4=1,0.044,9.2e-09,1	PL:DP:SP:GT:GQ	181,0,227:28:0:0/1:99
    291. 

  291. chr10	79541428	.	C	T	38.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49	PL:DP:SP:GT:GQ	71,12,0:4:0:1/1:72
    292. 

  292. chr10	79552151	.	T	C	65	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	98,27,0:9:0:1/1:99
    293. 

  293. chr10	79553673	.	T	C	26.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42	PL:DP:SP:GT:GQ	58,6,0:2:0:1/1:49
    294. 

  294. chr10	79584178	.	G	C	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,2,7;MQ=48	PL:DP:SP:GT:GQ	133,27,0:9:0:1/1:99
    295. 

  295. chr10	79590685	.	C	T	38.1	.	DP=18;AF1=0.5064;CI95=0.5,0.5;DP4=0,1,0,6;MQ=48;PV4=1,0.032,0.16,1	PL:DP:SP:GT:GQ	68,0,16:7:0:0/1:19
    296. 

  296. chr10	79614189	.	A	G	24.8	.	DP=30;AF1=0.6243;CI95=0.5,1;DP4=0,1,1,2;MQ=49;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	54,0,4:4:0:0/1:6
    297. 

  297. chr10	79616642	.	C	T	37	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=4,0,0,6;MQ=49;PV4=0.0048,0.0084,0.068,0.076	PL:DP:SP:GT:GQ	67,0,102:10:23:0/1:70
    298. 

  298. chr10	79628875	.	A	G	27	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48	PL:DP:SP:GT:GQ	59,9,0:3:0:1/1:63
    299. 

  299. chr10	80364929	.	G	A	8.65	.	DP=3;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	38,3,0:1:0:1/1:41
    300. 

  300. chr10	81053475	.	G	A	54	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,16,0,8;MQ=49;PV4=1,4.3e-08,8.9e-06,0.15	PL:DP:SP:GT:GQ	84,0,237:24:0:0/1:87
    301. 

  301. chr10	81267889	.	A	C	13	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    302. 

  302. chr10	81274706	.	G	A	50.1	.	DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,0;MQ=41;PV4=1,1,0.07,1	PL:DP:SP:GT:GQ	80,0,15:4:0:0/1:18
    303. 

  303. chr10	81274984	.	A	C	31.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	64,12,0:4:0:1/1:72
    304. 

  304. chr10	81318820	.	G	A	30	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,4;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	60,0,89:10:0:0/1:63
    305. 

  305. chr10	81701722	.	T	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,1,3,26;MQ=46;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	230,64,0:30:0:1/1:99
    306. 

  306. chr10	81841870	.	T	C	28.5	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	61,12,0:4:0:1/1:72
    307. 

  307. chr10	82040052	.	A	G	90.2	.	DP=28;AF1=0.7303;CI95=0.5,1;DP4=0,1,4,5;MQ=48;PV4=1,0.057,0.26,1	PL:DP:SP:GT:GQ	119,0,2:10:0:0/1:3
    308. 

  308. chr10	82043576	.	G	A	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46	PL:DP:SP:GT:GQ	148,45,0:15:0:1/1:99
    309. 

  309. chr10	82182296	.	G	A	18.5	.	DP=30;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,5;MQ=49;PV4=1,0.38,0.26,1	PL:DP:SP:GT:GQ	47,0,1:6:0:1/1:5
    310. 

  310. chr10	84042755	.	C	T	4.13	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=44	PL:DP:SP:GT:GQ	32,3,0:1:0:1/1:41
    311. 

  311. chr10	85974381	.	A	G	84	.	DP=34;AF1=1;CI95=1,1;DP4=0,0,0,31;MQ=49	PL:DP:SP:GT:GQ	117,93,0:31:0:1/1:99
    312. 

  312. chr10	85992511	.	T	C	99	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,1,7,5;MQ=48;PV4=0.15,6.4e-06,0.00057,1	PL:DP:SP:GT:GQ	171,0,240:23:8:0/1:99
    313. 

  313. chr10	85993836	.	A	G	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,1,9,13;MQ=46;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	255,49,0:23:0:1/1:99
    314. 

  314. chr10	85994142	.	A	G,C	50.5	.	DP=25;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47	PL:DP:SP:GT:GQ	98,27,78,15,0,78:5:0:1/1:72
    315. 

  315. chr10	86004873	.	T	C	75.1	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=49	PL:DP:SP:GT:GQ	108,21,0:7:0:1/1:84
    316. 

  316. chr10	86012713	.	C	T	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,6,18;MQ=45	PL:DP:SP:GT:GQ	255,72,0:24:0:1/1:99
    317. 

  317. chr10	86185654	.	T	G	57.1	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=49	PL:DP:SP:GT:GQ	90,21,0:7:0:1/1:84
    318. 

  318. chr10	87482991	.	C	T	4.77	.	DP=5;AF1=0.4999;CI95=0.5,0.5;DP4=0,2,0,2;MQ=48;PV4=1,0.21,0.072,1	PL:DP:SP:GT:GQ	33,0,59:4:0:0/1:36
    319. 

  319. chr10	88220866	.	C	T	31	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.007,0,1	PL:DP:SP:GT:GQ	61,0,80:4:0:0/1:64
    320. 

  320. chr10	88233628	.	C	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=47	PL:DP:SP:GT:GQ	150,42,0:14:0:1/1:99
    321. 

  321. chr10	88256943	.	C	T	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=46	PL:DP:SP:GT:GQ	179,27,0:9:0:1/1:99
    322. 

  322. chr10	88677115	.	T	G	25	.	DP=22;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=49;PV4=1,0.44,0.053,1	PL:DP:SP:GT:GQ	55,0,22:8:0:0/1:25
    323. 

  323. chr10	88761481	.	T	C	36	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=1,6,0,5;MQ=38;PV4=1,0.066,1,0.38	PL:DP:SP:GT:GQ	66,0,112:12:0:0/1:69
    324. 

  324. chr10	88768253	.	A	G	99	.	DP=54;AF1=1;CI95=1,1;DP4=1,0,28,18;MQ=21;PV4=1,1,0.0001,1	PL:DP:SP:GT:GQ	209,116,0:47:0:1/1:99
    325. 

  325. chr10	88768657	.	C	T	99	.	DP=43;AF1=1;CI95=1,1;DP4=1,1,17,10;MQ=43;PV4=1,0.18,1,1	PL:DP:SP:GT:GQ	255,49,0:29:0:1/1:99
    326. 

  326. chr10	89469083	.	CATATATATATATATATATA	CATATATATATATATA	37.5	.	INDEL;DP=21;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=50;PV4=1,1,1,0.39	PL:DP:SP:GT:GQ	75,0,56:4:0:0/1:59
    327. 

  327. chr10	90356598	.	A	G	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,5,7;MQ=43	PL:DP:SP:GT:GQ	255,36,0:12:0:1/1:99
    328. 

  328. chr10	90438327	.	T	G	6.2	.	DP=41;AF1=0.4999;CI95=0.5,0.5;DP4=14,6,0,7;MQ=49;PV4=0.0019,0.00013,0.00028,1	PL:DP:SP:GT:GQ	35,0,255:27:27:0/1:38
    329. 

  329. chr10	90545972	.	T	G	84.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=48	PL:DP:SP:GT:GQ	117,18,0:6:0:1/1:90
    330. 

  330. chr10	90546007	.	A	G	39.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=48	PL:DP:SP:GT:GQ	72,12,0:4:0:1/1:72
    331. 

  331. chr10	90585819	.	G	A	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,13,5;MQ=49;PV4=0.32,0.039,0.31,1	PL:DP:SP:GT:GQ	156,28,0:19:0:1/1:99
    332. 

  332. chr10	90767395	.	G	C	99	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=43	PL:DP:SP:GT:GQ	167,18,0:6:0:1/1:90
    333. 

  333. chr10	90771829	.	T	C	57.5	.	DP=29;AF1=0.8277;CI95=0.5,1;DP4=0,1,1,5;MQ=48;PV4=1,1,0.12,0.41	PL:DP:SP:GT:GQ	86,0,1:7:0:1/1:5
    334. 

  334. chr10	91066460	.	T	A	95	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,5,4;MQ=49	PL:DP:SP:GT:GQ	128,27,0:9:0:1/1:99
    335. 

  335. chr10	91099943	.	C	G	31	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	63,9,0:3:0:1/1:63
    336. 

  336. chr10	91137826	.	T	C	99	.	DP=24;AF1=1;CI95=0.5,1;DP4=1,0,13,0;MQ=45;PV4=1,1,0.07,1	PL:DP:SP:GT:GQ	182,15,0:14:0:1/1:75
    337. 

  337. chr10	91162182	.	C	T	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,1,16;MQ=49	PL:DP:SP:GT:GQ	147,51,0:17:0:1/1:99
    338. 

  338. chr10	91178000	.	C	T	99	.	DP=42;AF1=1;CI95=1,1;DP4=0,1,3,35;MQ=48;PV4=1,0.0097,0.11,1	PL:DP:SP:GT:GQ	185,83,0:39:0:1/1:99
    339. 

  339. chr10	91352966	.	G	A	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,5,13;MQ=49	PL:DP:SP:GT:GQ	173,54,0:18:0:1/1:99
    340. 

  340. chr10	91498127	.	T	C	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,2,20;MQ=47	PL:DP:SP:GT:GQ	195,66,0:22:0:1/1:99
    341. 

  341. chr10	91522605	.	G	C	99	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,1,0,9;MQ=43;PV4=1,1,0.45,1	PL:DP:SP:GT:GQ	163,14,0:10:0:1/1:70
    342. 

  342. chr10	91738755	.	T	C	71.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=47	PL:DP:SP:GT:GQ	104,15,0:5:0:1/1:75
    343. 

  343. chr10	93000211	.	G	A	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=45	PL:DP:SP:GT:GQ	161,39,0:13:0:1/1:99
    344. 

  344. chr10	93257936	.	T	G	4.13	.	DP=12;AF1=0.4999;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.12,1,0.46	PL:DP:SP:GT:GQ	32,0,40:6:0:0/1:34
    345. 

  345. chr10	93601285	.	G	C	38	.	DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,1,0,3;MQ=45;PV4=1,0.09,0.19,1	PL:DP:SP:GT:GQ	68,0,38:4:0:0/1:41
    346. 

  346. chr10	93604827	.	A	G	8.44	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=49	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    347. 

  347. chr10	93611176	.	ATATG	ATATGTATG	99	.	INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50	PL:DP:SP:GT:GQ	202,21,0:7:0:1/1:84
    348. 

  348. chr10	93702377	.	T	G	72	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	105,24,0:8:0:1/1:96
    349. 

  349. chr10	93778645	.	T	A	6.98	.	DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=12,1,0,6;MQ=49;PV4=0.00026,0.00012,0.0024,1	PL:DP:SP:GT:GQ	36,0,241:19:36:0/1:39
    350. 

  350. chr10	93841227	.	A	G	99	.	DP=28;AF1=1;CI95=1,1;DP4=1,0,8,13;MQ=46;PV4=0.41,1,0.053,1	PL:DP:SP:GT:GQ	255,42,0:22:0:1/1:99
    351. 

  351. chr10	94594565	.	G	A	99	.	DP=43;AF1=1;CI95=1,1;DP4=0,0,5,27;MQ=49	PL:DP:SP:GT:GQ	206,96,0:32:0:1/1:99
    352. 

  352. chr10	94688167	.	C	G	20	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,5;MQ=48;PV4=0.18,0.16,0.11,0.17	PL:DP:SP:GT:GQ	50,0,128:11:7:0/1:53
    353. 

  353. chr10	94695617	.	C	T	91	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48	PL:DP:SP:GT:GQ	124,27,0:9:0:1/1:99
    354. 

  354. chr10	94757270	.	C	T	64	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,0,5,0;MQ=46;PV4=1,0.17,0.098,1	PL:DP:SP:GT:GQ	94,0,50:7:0:0/1:53
    355. 

  355. chr10	94816807	.	GAAA	GAAAA	99	.	INDEL;DP=22;AF1=1;CI95=1,1;DP4=0,1,0,15;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	159,34,0:16:0:1/1:99
    356. 

  356. chr10	95043763	.	G	A	97	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=23	PL:DP:SP:GT:GQ	130,51,0:17:0:1/1:99
    357. 

  357. chr10	95072906	.	T	C	34.5	.	DP=49;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=49	PL:DP:SP:GT:GQ	67,12,0:4:0:1/1:72
    358. 

  358. chr10	95073046	.	A	G	66.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=45	PL:DP:SP:GT:GQ	99,15,0:5:0:1/1:75
    359. 

  359. chr10	95089312	.	T	C	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45	PL:DP:SP:GT:GQ	133,15,0:5:0:1/1:75
    360. 

  360. chr10	95132905	.	C	T	18	.	DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	50,9,0:3:0:1/1:63
    361. 

  361. chr10	95162113	.	G	C	69	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,0,23;MQ=49	PL:DP:SP:GT:GQ	102,69,0:23:0:1/1:99
    362. 

  362. chr10	95164040	.	A	G	66.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46	PL:DP:SP:GT:GQ	99,15,0:5:0:1/1:75
    363. 

  363. chr10	95241999	.	A	C	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,0,26;MQ=46	PL:DP:SP:GT:GQ	164,78,0:26:0:1/1:99
    364. 

  364. chr10	95262981	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,22,9;MQ=50	PL:DP:SP:GT:GQ	161,93,0:31:0:1/1:99
    365. 

  365. chr10	95400773	.	T	G	47	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,7;MQ=48;PV4=0.22,0.047,0.064,1	PL:DP:SP:GT:GQ	77,0,43:9:0:0/1:46
    366. 

  366. chr10	95459817	.	C	T	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,10,2;MQ=49	PL:DP:SP:GT:GQ	140,36,0:12:0:1/1:99
    367. 

  367. chr10	95557593	.	T	G	32.5	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	65,12,0:4:0:1/1:72
    368. 

  368. chr10	95641536	.	A	C	34	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47	PL:DP:SP:GT:GQ	66,9,0:3:0:1/1:63
    369. 

  369. chr10	96044579	.	A	C	8.64	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=49;PV4=0.17,0.3,0.012,1	PL:DP:SP:GT:GQ	38,0,122:9:8:0/1:41
    370. 

  370. chr10	96100314	.	A	C	8.65	.	DP=12;AF1=0.5006;CI95=0.5,0.5;DP4=0,1,0,2;MQ=48;PV4=1,0.23,0.27,1	PL:DP:SP:GT:GQ	38,0,26:3:0:0/1:29
    371. 

  371. chr10	96271298	.	A	C	65	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	98,27,0:9:0:1/1:99
    372. 

  372. chr10	96313960	.	A	C	22.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49	PL:DP:SP:GT:GQ	55,12,0:4:0:1/1:72
    373. 

  373. chr10	96827178	.	T	C	90	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48	PL:DP:SP:GT:GQ	123,39,0:13:0:1/1:99
    374. 

  374. chr10	97096639	.	A	T	37	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,13,8,0;MQ=48;PV4=2.8e-05,0.00047,0.0066,1	PL:DP:SP:GT:GQ	67,0,237:22:46:0/1:70
    375. 

  375. chr10	97141523	.	G	A	99	.	DP=36;AF1=1;CI95=1,1;DP4=0,0,6,26;MQ=49	PL:DP:SP:GT:GQ	235,96,0:32:0:1/1:99
    376. 

  376. chr10	97440328	.	G	A	19.1	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=1,2,0,3;MQ=48;PV4=1,0.4,0.0097,1	PL:DP:SP:GT:GQ	49,0,61:6:0:0/1:52
    377. 

  377. chr10	97447373	.	A	T	87	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,9,1,6;MQ=48;PV4=1,0.0014,0.00063,0.24	PL:DP:SP:GT:GQ	117,0,224:17:0:0/1:99
    378. 

  378. chr10	97605057	.	C	G	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=15,1,14,0;MQ=47;PV4=1,9.9e-10,0,1	PL:DP:SP:GT:GQ	188,0,255:30:0:0/1:99
    379. 

  379. chr10	97816749	.	C	G	39	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,2,0,7;MQ=49;PV4=0.0032,2.5e-05,0.00085,1	PL:DP:SP:GT:GQ	69,0,243:16:25:0/1:72
    380. 

  380. chr10	98082385	.	A	G	27	.	DP=9;AF1=0.5032;CI95=0.5,0.5;DP4=1,0,4,0;MQ=48;PV4=1,0.0099,0.063,0.38	PL:DP:SP:GT:GQ	57,0,19:5:0:0/1:22
    381. 

  381. chr10	98084231	.	A	G	34.5	.	DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	67,12,0:4:0:1/1:72
    382. 

  382. chr10	98092426	.	G	A	35	.	DP=21;AF1=0.5002;CI95=0.5,0.5;DP4=0,2,0,4;MQ=45;PV4=1,1,0.033,1	PL:DP:SP:GT:GQ	65,0,31:6:0:0/1:34
    383. 

  383. chr10	98092427	.	G	A	39	.	DP=22;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,7;MQ=45;PV4=1,0.32,1,0.14	PL:DP:SP:GT:GQ	69,0,29:10:0:0/1:32
    384. 

  384. chr10	98144312	.	G	A	99	.	DP=42;AF1=1;CI95=1,1;DP4=0,0,36,0;MQ=49	PL:DP:SP:GT:GQ	150,108,0:36:0:1/1:99
    385. 

  385. chr10	98240035	.	A	T	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=44	PL:DP:SP:GT:GQ	211,36,0:12:0:1/1:99
    386. 

  386. chr10	98281981	.	A	C	32.1	.	DP=14;AF1=0.5129;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.044,1	PL:DP:SP:GT:GQ	62,0,13:7:0:0/1:16
    387. 

  387. chr10	98380115	.	G	C	8.64	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=4,4,4,0;MQ=48;PV4=0.21,0.11,0.11,0.38	PL:DP:SP:GT:GQ	38,0,174:12:7:0/1:41
    388. 

  388. chr10	98380277	.	C	T	76.1	.	DP=30;AF1=0.505;CI95=0.5,0.5;DP4=1,0,3,6;MQ=49;PV4=0.4,0.00077,0.27,1	PL:DP:SP:GT:GQ	106,0,17:10:0:0/1:20
    389. 

  389. chr10	98380363	.	A	G	73	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	106,24,0:8:0:1/1:96
    390. 

  390. chr10	98410947	.	A	C	49	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=3,0,7,0;MQ=46;PV4=1,0.32,0.072,1	PL:DP:SP:GT:GQ	79,0,38:10:0:0/1:41
    391. 

  391. chr10	99019177	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,1,17,11;MQ=47;PV4=0.41,0.24,0.18,1	PL:DP:SP:GT:GQ	255,57,0:29:0:1/1:99
    392. 

  392. chr10	99422648	.	A	G	38	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,0,9,0;MQ=49;PV4=1,3.6e-05,0.22,1	PL:DP:SP:GT:GQ	68,0,178:17:0:0/1:71
    393. 

  393. chr10	99682981	.	T	C	59	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=11,5,11,0;MQ=49;PV4=0.06,1.2e-06,0.0071,1	PL:DP:SP:GT:GQ	89,0,255:27:12:0/1:92
    394. 

  394. chr10	99969568	.	A	G	99	.	DP=64;AF1=1;CI95=1,1;DP4=0,1,28,22;MQ=50;PV4=0.45,0.0011,0.41,1	PL:DP:SP:GT:GQ	163,122,0:51:0:1/1:99
    395. 

  395. chr10	99991408	.	A	G	99	.	DP=43;AF1=1;CI95=1,1;DP4=1,1,11,25;MQ=46;PV4=0.54,1,0.052,1	PL:DP:SP:GT:GQ	255,66,0:38:3:1/1:99
    396. 

  396. chr10	100144782	.	C	T	77	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=1,3,2,5;MQ=48;PV4=1,5.7e-07,0.051,1	PL:DP:SP:GT:GQ	107,0,146:11:0:0/1:99
    397. 

  397. chr10	100146895	.	T	C	37	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,0.0012,0.0087,1	PL:DP:SP:GT:GQ	67,0,150:9:0:0/1:70
    398. 

  398. chr10	100147097	.	G	A	24	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,5;MQ=50;PV4=1,8.6e-09,0.095,1	PL:DP:SP:GT:GQ	54,0,210:14:0:0/1:57
    399. 

  399. chr10	100148176	.	A	G	99	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=3,10,3,14;MQ=49;PV4=1,3.3e-08,0.007,1	PL:DP:SP:GT:GQ	149,0,255:30:0:0/1:99
    400. 

  400. chr10	100155110	.	C	A	20	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,5;MQ=48;PV4=0.45,0.11,1,1	PL:DP:SP:GT:GQ	50,0,136:11:3:0/1:53
    401. 

  401. chr10	100167396	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,6,14;MQ=48	PL:DP:SP:GT:GQ	225,60,0:20:0:1/1:99
    402. 

  402. chr10	100183774	.	A	G	60.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47	PL:DP:SP:GT:GQ	93,15,0:5:0:1/1:75
    403. 

  403. chr10	100219314	.	G	A	64	.	DP=48;AF1=0.5;CI95=0.5,0.5;DP4=23,11,11,1;MQ=49;PV4=0.14,1.1e-15,9.2e-14,1	PL:DP:SP:GT:GQ	94,0,255:46:9:0/1:97
    404. 

  404. chr10	101466569	.	C	G	11.3	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=42	PL:DP:SP:GT:GQ	41,3,0:1:0:1/1:41
    405. 

  405. chr10	101544447	.	A	T	99	.	DP=61;AF1=1;CI95=1,1;DP4=0,0,6,7;MQ=48	PL:DP:SP:GT:GQ	176,39,0:13:0:1/1:99
    406. 

  406. chr10	101591944	.	T	C	98	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48	PL:DP:SP:GT:GQ	131,36,0:12:0:1/1:99
    407. 

  407. chr10	101596043	.	A	C	37	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=6,9,0,11;MQ=49;PV4=0.024,0.0029,0.0014,1	PL:DP:SP:GT:GQ	67,0,255:26:16:0/1:70
    408. 

  408. chr10	101639905	.	T	A	60	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,11;MQ=48;PV4=1,0.19,0.12,1	PL:DP:SP:GT:GQ	90,0,75:17:0:0/1:78
    409. 

  409. chr10	101645498	.	T	C	99	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=5,4,4,1;MQ=48;PV4=0.58,0.48,0,1	PL:DP:SP:GT:GQ	138,0,255:14:2:0/1:99
    410. 

  410. chr10	101654696	.	T	C	99	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=8,3,13,1;MQ=48;PV4=0.29,1.4e-06,4.8e-09,1	PL:DP:SP:GT:GQ	142,0,255:25:5:0/1:99
    411. 

  411. chr10	101874506	.	T	C	68.3	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47	PL:DP:SP:GT:GQ	101,15,0:5:0:1/1:75
    412. 

  412. chr10	101995473	.	C	G	5.46	.	DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=1,2,0,2;MQ=48;PV4=1,1,0.12,1	PL:DP:SP:GT:GQ	34,0,60:5:0:0/1:37
    413. 

  413. chr10	101996787	.	C	G	78	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,9;MQ=47;PV4=1,0.44,0.014,1	PL:DP:SP:GT:GQ	108,0,52:13:0:0/1:55
    414. 

  414. chr10	102016044	.	C	T	49	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=3,4,4,2;MQ=48;PV4=0.59,0.0088,0.17,1	PL:DP:SP:GT:GQ	79,0,196:13:2:0/1:82
    415. 

  415. chr10	102114201	.	G	A	22	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=2,3,6,0;MQ=48;PV4=0.061,0.016,0.0027,0.1	PL:DP:SP:GT:GQ	52,0,144:11:12:0/1:55
    416. 

  416. chr10	102267312	.	C	G	43	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,6,0,6;MQ=48;PV4=0.23,0.24,0.0085,1	PL:DP:SP:GT:GQ	73,0,167:15:6:0/1:76
    417. 

  417. chr10	102780312	.	G	T	76	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	109,27,0:9:0:1/1:99
    418. 

  418. chr10	102796952	.	C	A	29	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=5,4,0,5;MQ=49;PV4=0.086,0.073,0.0025,1	PL:DP:SP:GT:GQ	59,0,203:14:11:0/1:62
    419. 

  419. chr10	103221870	.	CAGGAGGA	CAGGA	99	.	INDEL;DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=50	PL:DP:SP:GT:GQ	252,39,0:13:0:1/1:99
    420. 

  420. chr10	103294568	.	T	G	31	.	DP=39;AF1=0.5;CI95=0.5,0.5;DP4=2,16,1,6;MQ=49;PV4=1,9.7e-05,3.2e-05,0.12	PL:DP:SP:GT:GQ	61,0,255:25:0:0/1:64
    421. 

  421. chr10	103340168	.	C	G	24	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,3,0,3;MQ=47;PV4=1,1,0.19,0.14	PL:DP:SP:GT:GQ	54,0,83:7:0:0/1:57
    422. 

  422. chr10	103432592	.	A	C	37.2	.	DP=16;AF1=0.5207;CI95=0.5,1;DP4=1,0,5,0;MQ=48;PV4=1,0.016,0.031,0.11	PL:DP:SP:GT:GQ	67,0,11:6:0:0/1:14
    423. 

  423. chr10	103541948	.	C	T	20	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	52,9,0:3:0:1/1:63
    424. 

  424. chr10	104136469	.	T	C	88.5	.	DP=49;AF1=1;CI95=0.5,1;DP4=0,1,2,6;MQ=48;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	121,12,0:9:0:1/1:72
    425. 

  425. chr10	104233278	.	G	A	5.46	.	DP=19;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,3,0;MQ=48;PV4=1,0.035,0.44,0.48	PL:DP:SP:GT:GQ	34,0,45:6:0:0/1:37
    426. 

  426. chr10	104375258	.	G	A	55.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45	PL:DP:SP:GT:GQ	88,12,0:4:0:1/1:72
    427. 

  427. chr10	104459079	.	TAA	T	99	.	INDEL;DP=11;AF1=1;CI95=1,1;DP4=0,0,9,1;MQ=50	PL:DP:SP:GT:GQ	240,30,0:10:0:1/1:99
    428. 

  428. chr10	104572276	.	A	G	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,25,1;MQ=48	PL:DP:SP:GT:GQ	159,78,0:26:0:1/1:99
    429. 

  429. chr10	105158281	.	T	G	60	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,9;MQ=48;PV4=1,0.29,9.5e-05,1	PL:DP:SP:GT:GQ	90,0,89:15:0:0/1:89
    430. 

  430. chr10	105176179	.	T	C	68.1	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	101,21,0:7:0:1/1:84
    431. 

  431. chr10	105362209	.	T	C	82.4	.	DP=80;AF1=1;CI95=0.5,1;DP4=1,0,7,5;MQ=50;PV4=1,0.037,0.32,1	PL:DP:SP:GT:GQ	115,13,0:13:0:1/1:65
    432. 

  432. chr10	105363289	.	T	C	99	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=4,6,8,5;MQ=48;PV4=0.41,1.5e-05,1.9e-06,0.27	PL:DP:SP:GT:GQ	184,0,255:23:4:0/1:99
    433. 

  433. chr10	105659826	.	T	C	64.1	.	DP=42;AF1=0.5102;CI95=0.5,0.5;DP4=1,2,26,1;MQ=48;PV4=0.02,0.00088,0.18,1	PL:DP:SP:GT:GQ	94,0,14:30:17:0/1:17
    434. 

  434. chr10	105762429	.	C	G	33	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=2,2,0,4;MQ=49;PV4=0.43,0.18,0.039,1	PL:DP:SP:GT:GQ	63,0,105:8:4:0/1:66
    435. 

  435. chr10	105793173	.	T	G	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,1,4,17;MQ=49;PV4=1,0.074,1,1	PL:DP:SP:GT:GQ	161,41,0:22:0:1/1:99
    436. 

  436. chr10	105796449	.	A	G	33.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=49	PL:DP:SP:GT:GQ	66,12,0:4:0:1/1:72
    437. 

  437. chr10	105796819	.	A	G	41.5	.	DP=25;AF1=1;CI95=0.5,1;DP4=0,0,3,1;MQ=49	PL:DP:SP:GT:GQ	74,12,0:4:0:1/1:72
    438. 

  438. chr10	105799825	.	G	A	31	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,6;MQ=49;PV4=1,0.039,0.031,1	PL:DP:SP:GT:GQ	61,0,76:11:0:0/1:64
    439. 

  439. chr10	105833027	.	T	A	6.2	.	DP=17;AF1=0.4999;CI95=0.5,0.5;DP4=3,1,0,4;MQ=49;PV4=0.14,0.0017,0.053,1	PL:DP:SP:GT:GQ	35,0,102:8:8:0/1:38
    440. 

  440. chr10	108380213	.	G	A	99	.	DP=56;AF1=0.5;CI95=0.5,0.5;DP4=11,9,14,12;MQ=49;PV4=1,0.00077,0.00024,1	PL:DP:SP:GT:GQ	223,0,255:46:0:0/1:99
    441. 

  441. chr10	108389249	.	T	C	84.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=43	PL:DP:SP:GT:GQ	117,12,0:4:0:1/1:72
    442. 

  442. chr10	111631665	.	C	G	99	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,0,28;MQ=48	PL:DP:SP:GT:GQ	157,84,0:28:0:1/1:99
    443. 

  443. chr10	112053827	.	A	G	8.44	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    444. 

  444. chr10	112328838	.	C	G	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=47	PL:DP:SP:GT:GQ	137,30,0:10:0:1/1:99
    445. 

  445. chr10	112361870	.	A	G	28	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=47	PL:DP:SP:GT:GQ	60,9,0:3:0:1/1:63
    446. 

  446. chr10	112641053	.	A	G	62.6	.	DP=27;AF1=0.5939;CI95=0.5,1;DP4=1,0,10,1;MQ=48;PV4=1,0.0027,0.18,1	PL:DP:SP:GT:GQ	92,0,5:12:0:0/1:7
    447. 

  447. chr10	113862045	.	C	CTT	9.05	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	46,3,0:1:0:1/1:41
    448. 

  448. chr10	113940329	.	T	C	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,1,16;MQ=43;PV4=1,1,2.8e-15,1	PL:DP:SP:GT:GQ	255,38,0:18:0:1/1:99
    449. 

  449. chr10	114043541	.	G	A	34	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,5;MQ=48;PV4=0.44,0.029,0.039,1	PL:DP:SP:GT:GQ	64,0,137:10:4:0/1:67
    450. 

  450. chr10	114053546	.	C	G	18.1	.	DP=48;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,4,1;MQ=50;PV4=1,0.011,0.29,1	PL:DP:SP:GT:GQ	48,0,33:7:0:0/1:36
    451. 

  451. chr10	114059330	.	TCTCTGTTTTCCTCTGTTTTCC	TCTCTGTTTTCC	99	.	INDEL;DP=36;AF1=0.5;CI95=0.5,0.5;DP4=3,8,0,9;MQ=50;PV4=0.22,1,1,1	PL:DP:SP:GT:GQ	198,0,255:20:7:0/1:99
    452. 

  452. chr10	114186624	.	G	A	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,2,23;MQ=49	PL:DP:SP:GT:GQ	132,75,0:25:0:1/1:99
    453. 

  453. chr10	114224502	.	C	G	11.3	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	43,9,0:3:0:1/1:63
    454. 

  454. chr10	114828193	.	A	C	75	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43	PL:DP:SP:GT:GQ	107,9,0:3:0:1/1:63
    455. 

  455. chr10	115242531	.	T	G	63.1	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,3,3;MQ=49	PL:DP:SP:GT:GQ	96,18,0:6:0:1/1:90
    456. 

  456. chr10	115242720	.	T	A	21.5	.	DP=17;AF1=0.8277;CI95=0.5,1;DP4=1,0,2,1;MQ=36;PV4=1,1,0.28,0.064	PL:DP:SP:GT:GQ	50,0,1:4:0:1/1:5
    457. 

  457. chr10	115338305	.	T	C	47	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=13,0,7,0;MQ=49;PV4=1,1.7e-08,0.00076,1	PL:DP:SP:GT:GQ	77,0,230:20:0:0/1:80
    458. 

  458. chr10	115341545	.	G	C	38	.	DP=9;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=49;PV4=1,1,0.23,1	PL:DP:SP:GT:GQ	68,0,37:8:0:0/1:40
    459. 

  459. chr10	115343803	.	C	T	75	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=43	PL:DP:SP:GT:GQ	107,9,0:3:0:1/1:63
    460. 

  460. chr10	115349397	.	AGGGG	AGGG	99	.	INDEL;DP=26;AF1=1;CI95=0.5,1;DP4=2,0,15,3;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	147,15,0:20:0:1/1:75
    461. 

  461. chr10	115370274	.	T	C	99	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,9,2,8;MQ=47;PV4=1,6.9e-08,7.5e-09,0.17	PL:DP:SP:GT:GQ	216,0,255:21:0:0/1:99
    462. 

  462. chr10	115377190	.	T	G	70.5	.	DP=14;AF1=1;CI95=0.5,1;DP4=1,0,9,0;MQ=45;PV4=1,1,0.2,0.32	PL:DP:SP:GT:GQ	102,7,0:10:0:1/1:57
    463. 

  463. chr10	115405664	.	C	T	99	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=17,8,6,7;MQ=48;PV4=0.3,0.00031,1.7e-10,1	PL:DP:SP:GT:GQ	201,0,255:38:5:0/1:99
    464. 

  464. chr10	115411614	.	A	G	99	.	DP=46;AF1=1;CI95=1,1;DP4=0,1,12,25;MQ=48;PV4=1,0.019,0.24,1	PL:DP:SP:GT:GQ	227,84,0:38:0:1/1:99
    465. 

  465. chr10	115601169	.	A	G	7.8	.	DP=5;AF1=0.5;CI95=0.5,0.5;DP4=2,0,2,0;MQ=47;PV4=1,0.17,0.044,1	PL:DP:SP:GT:GQ	37,0,51:4:0:0/1:40
    466. 

  466. chr10	116044587	.	C	T	77.1	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	110,21,0:7:0:1/1:84
    467. 

  467. chr10	116058933	.	G	A	54.3	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45	PL:DP:SP:GT:GQ	87,15,0:5:0:1/1:75
    468. 

  468. chr10	116060194	.	AGG	AGGG	84.5	.	INDEL;DP=10;AF1=0.5025;CI95=0.5,0.5;DP4=0,2,0,6;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	122,0,20:8:0:0/1:23
    469. 

  469. chr10	116073696	.	C	T	99	.	DP=34;AF1=1;CI95=1,1;DP4=0,0,13,17;MQ=47	PL:DP:SP:GT:GQ	255,90,0:30:0:1/1:99
    470. 

  470. chr10	116199010	.	C	G	81	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,5,0,9;MQ=47;PV4=0.082,0.027,7.7e-06,1	PL:DP:SP:GT:GQ	111,0,202:17:11:0/1:99
    471. 

  471. chr10	116307504	.	A	G	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,9,14;MQ=44	PL:DP:SP:GT:GQ	255,69,0:23:0:1/1:99
    472. 

  472. chr10	116335246	.	G	A	56.2	.	DP=49;AF1=0.7303;CI95=0.5,1;DP4=0,1,2,4;MQ=48;PV4=1,0.4,0.23,1	PL:DP:SP:GT:GQ	85,0,2:7:0:0/1:3
    473. 

  473. chr10	116702545	.	T	G	71.1	.	DP=16;AF1=1;CI95=0.5,1;DP4=0,1,0,7;MQ=46;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	102,5,0:8:0:1/1:46
    474. 

  474. chr10	116931101	.	CT	CTTT	99	.	INDEL;DP=11;AF1=0.95;CI95=0.5,1;DP4=0,1,0,5;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	149,0,0:6:0:1/1:10
    475. 

  475. chr10	117075175	.	G	A	88	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,5,3;MQ=49	PL:DP:SP:GT:GQ	121,24,0:8:0:1/1:96
    476. 

  476. chr10	117308924	.	T	G	23	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=4,0,4,0;MQ=46;PV4=1,0.16,0.1,1	PL:DP:SP:GT:GQ	53,0,70:8:0:0/1:56
    477. 

  477. chr10	118220500	.	T	G	28	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=10,2,0,9;MQ=49;PV4=0.00022,1.4e-05,0.0031,1	PL:DP:SP:GT:GQ	58,0,244:21:37:0/1:61
    478. 

  478. chr10	118313265	.	T	C	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,13,3;MQ=48	PL:DP:SP:GT:GQ	169,48,0:16:0:1/1:99
    479. 

  479. chr10	118357490	.	C	T	99	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=0,5,12,3;MQ=47;PV4=0.0036,0.27,1,1	PL:DP:SP:GT:GQ	138,0,47:20:24:0/1:50
    480. 

  480. chr10	118363642	.	T	C	99	.	DP=24;AF1=1;CI95=0.5,1;DP4=1,1,0,18;MQ=46;PV4=0.1,1,0.0085,1	PL:DP:SP:GT:GQ	133,10,0:20:0:1/1:60
    481. 

  481. chr10	118364818	.	G	T	70	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,13,0;MQ=47	PL:DP:SP:GT:GQ	103,39,0:13:0:1/1:99
    482. 

  482. chr10	118364842	.	A	G	70	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=15,0,12,0;MQ=49;PV4=1,6.8e-11,0.00086,0.27	PL:DP:SP:GT:GQ	100,0,234:27:0:0/1:99
    483. 

  483. chr10	119014023	.	C	T	18	.	DP=31;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	50,9,0:3:0:1/1:63
    484. 

  484. chr10	119014931	.	C	T	73	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=9,7,8,3;MQ=46;PV4=0.45,0.029,0.017,1	PL:DP:SP:GT:GQ	103,0,230:27:3:0/1:99
    485. 

  485. chr10	119014948	.	C	A	99	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=8,3,8,3;MQ=45;PV4=1,0.0042,0.0079,1	PL:DP:SP:GT:GQ	220,0,255:22:0:0/1:99
    486. 

  486. chr10	119029744	.	G	A	99	.	DP=54;AF1=1;CI95=1,1;DP4=0,1,14,25;MQ=47;PV4=1,1,0.42,1	PL:DP:SP:GT:GQ	255,95,0:40:0:1/1:99
    487. 

  487. chr10	119768551	.	C	T	99	.	DP=37;AF1=1;CI95=1,1;DP4=1,1,23,8;MQ=49;PV4=0.48,0.3,0.11,1	PL:DP:SP:GT:GQ	204,48,0:33:3:1/1:99
    488. 

  488. chr10	120692771	.	T	C	43	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,4;MQ=48;PV4=1,4.5e-05,5.6e-12,0.032	PL:DP:SP:GT:GQ	73,0,208:13:0:0/1:76
    489. 

  489. chr10	120818609	.	C	T	26.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50	PL:DP:SP:GT:GQ	59,15,0:5:0:1/1:75
    490. 

  490. chr10	120917445	.	G	A	99	.	DP=55;AF1=1;CI95=1,1;DP4=0,0,7,15;MQ=48	PL:DP:SP:GT:GQ	214,66,0:22:0:1/1:99
    491. 

  491. chr10	120919246	.	T	C	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,1,10,17;MQ=50;PV4=1,7.6e-08,0.33,1	PL:DP:SP:GT:GQ	164,51,0:28:0:1/1:99
    492. 

  492. chr10	120928092	.	A	G	22	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,4;MQ=49;PV4=1,1,0.071,1	PL:DP:SP:GT:GQ	52,0,54:8:0:0/1:53
    493. 

  493. chr10	120933324	.	G	A	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=45	PL:DP:SP:GT:GQ	132,21,0:7:0:1/1:84
    494. 

  494. chr10	120933901	.	T	C	41	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=50	PL:DP:SP:GT:GQ	74,33,0:11:0:1/1:99
    495. 

  495. chr10	121199189	.	T	C	86	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=49	PL:DP:SP:GT:GQ	119,42,0:14:0:1/1:99
    496. 

  496. chr10	121199437	.	T	C	26	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	58,9,0:3:0:1/1:63
    497. 

  497. chr10	121201626	.	T	C	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=46	PL:DP:SP:GT:GQ	150,57,0:19:0:1/1:99
    498. 

  498. chr10	121207895	.	G	A	15.9	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	47,6,0:2:0:1/1:49
    499. 

  499. chr10	121274957	.	T	G	4.16	.	DP=9;AF1=0.5062;CI95=0.5,0.5;DP4=1,0,2,0;MQ=49;PV4=1,0.27,0.33,0.18	PL:DP:SP:GT:GQ	32,0,16:3:0:0/1:19
    500. 

  500. chr10	121287019	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=44	PL:DP:SP:GT:GQ	199,48,0:16:0:1/1:99
    501. 

  501. chr10	121436362	.	A	G	99	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=8,14,11,4;MQ=49;PV4=0.045,1.6e-06,1.5e-06,1	PL:DP:SP:GT:GQ	145,0,255:37:13:0/1:99
    502. 

  502. chr10	121565015	.	C	G	85	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=47	PL:DP:SP:GT:GQ	118,24,0:8:0:1/1:96
    503. 

  503. chr10	121612471	.	A	G	16.5	.	DP=11;AF1=0.5554;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.33,1	PL:DP:SP:GT:GQ	46,0,7:4:0:0/1:10
    504. 

  504. chr10	122278402	.	T	A	37	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,1,1,6;MQ=47;PV4=0.18,0.031,0.066,1	PL:DP:SP:GT:GQ	67,0,78:10:7:0/1:70
    505. 

  505. chr10	122625233	.	T	G	21	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.18,0.015,0.39	PL:DP:SP:GT:GQ	51,0,46:6:0:0/1:48
    506. 

  506. chr10	122626615	.	T	G	45	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=2,10,9,0;MQ=49;PV4=0.00022,0.0014,0.043,0.067	PL:DP:SP:GT:GQ	75,0,237:21:37:0/1:78
    507. 

  507. chr10	122648671	.	T	A	21.1	.	DP=20;AF1=0.5064;CI95=0.5,0.5;DP4=0,1,0,3;MQ=45;PV4=1,0.15,0.29,1	PL:DP:SP:GT:GQ	51,0,16:4:0:0/1:19
    508. 

  508. chr10	122663585	.	G	A	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,11,2;MQ=47	PL:DP:SP:GT:GQ	178,39,0:13:0:1/1:99
    509. 

  509. chr10	122665509	.	T	G	31	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=10,2,1,7;MQ=49;PV4=0.0045,0.051,0.00012,1	PL:DP:SP:GT:GQ	61,0,192:20:23:0/1:64
    510. 

  510. chr10	122668296	.	G	A	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=44	PL:DP:SP:GT:GQ	222,39,0:13:0:1/1:99
    511. 

  511. chr10	123596254	.	T	C	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,15,2;MQ=45	PL:DP:SP:GT:GQ	236,51,0:17:0:1/1:99
    512. 

  512. chr10	123845322	.	T	C	23.1	.	DP=15;AF1=0.5129;CI95=0.5,0.5;DP4=0,1,2,1;MQ=48;PV4=1,0.34,0.3,1	PL:DP:SP:GT:GQ	53,0,13:4:0:0/1:16
    513. 

  513. chr10	123976391	.	C	A	42.3	.	DP=20;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=47	PL:DP:SP:GT:GQ	75,15,0:5:0:1/1:75
    514. 

  514. chr10	124036226	.	T	C	9.58	.	DP=16;AF1=0.508;CI95=0.5,0.5;DP4=1,0,3,0;MQ=49;PV4=1,0.17,1,1	PL:DP:SP:GT:GQ	39,0,15:4:0:0/1:18
    515. 

  515. chr10	124036494	.	T	C	54.1	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	87,18,0:6:0:1/1:90
    516. 

  516. chr10	124089036	.	G	A	97.3	.	DP=35;AF1=0.543;CI95=0.5,1;DP4=1,0,3,10;MQ=48;PV4=0.29,2.8e-06,0.23,0.47	PL:DP:SP:GT:GQ	127,0,8:14:0:0/1:11
    517. 

  517. chr10	124152936	.	GA	GAA	55	.	INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50	PL:DP:SP:GT:GQ	95,12,0:4:0:1/1:72
    518. 

  518. chr10	124183732	.	T	C	74	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=48	PL:DP:SP:GT:GQ	107,33,0:11:0:1/1:99
    519. 

  519. chr10	124189197	.	A	G	99	.	DP=39;AF1=1;CI95=1,1;DP4=1,1,16,9;MQ=47;PV4=1,0.22,0.15,1	PL:DP:SP:GT:GQ	224,24,0:27:0:1/1:96
    520. 

  520. chr10	124271589	.	G	A	98	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,1,15;MQ=44	PL:DP:SP:GT:GQ	131,48,0:16:0:1/1:99
    521. 

  521. chr10	124271595	.	G	A	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,1,24;MQ=43	PL:DP:SP:GT:GQ	255,75,0:25:0:1/1:99
    522. 

  522. chr10	124457452	.	C	T	99	.	DP=52;AF1=1;CI95=1,1;DP4=0,0,17,29;MQ=49	PL:DP:SP:GT:GQ	255,138,0:46:0:1/1:99
    523. 

  523. chr10	124595870	.	TCAG	T	5.08	.	INDEL;DP=6;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,1;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	41,0,53:3:0:0/1:44
    524. 

  524. chr10	124596984	.	A	G	7.8	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,2;MQ=47;PV4=1,0.35,0.033,1	PL:DP:SP:GT:GQ	37,0,51:4:0:0/1:40
    525. 

  525. chr10	124640434	.	C	T	24	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=49	PL:DP:SP:GT:GQ	56,9,0:3:0:1/1:63
    526. 

  526. chr10	124692017	.	G	A	16.1	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=1,6,4,0;MQ=49;PV4=0.015,0.075,0.00032,1	PL:DP:SP:GT:GQ	46,0,163:11:18:0/1:49
    527. 

  527. chr10	124736337	.	C	T	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    528. 

  528. chr10	124742792	.	G	A	99	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=6,1,5,1;MQ=47;PV4=1,0.0099,0,0.24	PL:DP:SP:GT:GQ	158,0,211:13:0:0/1:99
    529. 

  529. chr10	124810578	.	A	C	15.1	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,2,4,0;MQ=48;PV4=0.14,0.097,1,1	PL:DP:SP:GT:GQ	45,0,72:7:8:0/1:48
    530. 

  530. chr10	125622250	.	CAAA	CAA	89.8	.	INDEL;DP=18;AF1=1;CI95=0.5,1;DP4=0,1,0,13;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	130,14,0:14:0:1/1:70
    531. 

  531. chr10	125689719	.	C	CAT	12.7	.	INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    532. 

  532. chr10	125780954	.	T	G	25.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50	PL:DP:SP:GT:GQ	58,12,0:4:0:1/1:72
    533. 

  533. chr10	125801761	.	A	T	99	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=17,1,10,0;MQ=48;PV4=1,0.043,3.1e-09,1	PL:DP:SP:GT:GQ	138,0,255:28:0:0/1:99
    534. 

  534. chr10	126086730	.	G	A	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=47	PL:DP:SP:GT:GQ	146,39,0:13:0:1/1:99
    535. 

  535. chr10	126093991	.	T	C	99	.	DP=32;AF1=1;CI95=0.5,1;DP4=2,2,22,4;MQ=46;PV4=0.17,1,0.11,1	PL:DP:SP:GT:GQ	202,8,0:30:8:1/1:56
    536. 

  536. chr10	126185451	.	T	C	14.2	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=49;PV4=1,0.0029,0.014,0.45	PL:DP:SP:GT:GQ	44,0,169:9:0:0/1:47
    537. 

  537. chr10	126631348	.	T	G	6.2	.	DP=38;AF1=0.4999;CI95=0.5,0.5;DP4=14,2,0,5;MQ=49;PV4=0.001,0.0035,3e-10,0.36	PL:DP:SP:GT:GQ	35,0,255:21:30:0/1:38
    538. 

  538. chr10	127426588	.	C	A	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,0,20;MQ=44	PL:DP:SP:GT:GQ	215,60,0:20:0:1/1:99
    539. 

  539. chr10	127426835	.	G	T	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=48	PL:DP:SP:GT:GQ	138,45,0:15:0:1/1:99
    540. 

  540. chr10	127484617	.	C	G	52	.	DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=48;PV4=1,0.0013,0.21,1	PL:DP:SP:GT:GQ	82,0,69:8:0:0/1:72
    541. 

  541. chr10	127484653	.	G	A	66	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,1,7,1;MQ=49;PV4=1,0.00022,0.037,0.29	PL:DP:SP:GT:GQ	96,0,210:16:0:0/1:99
    542. 

  542. chr10	127522572	.	T	G	10.4	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=49;PV4=1,0.003,1,1	PL:DP:SP:GT:GQ	40,0,162:13:0:0/1:43
    543. 

  543. chr10	127541922	.	T	G	41.2	.	DP=10;AF1=0.5263;CI95=0.5,1;DP4=0,1,0,5;MQ=46;PV4=1,0.24,1,1	PL:DP:SP:GT:GQ	71,0,10:6:0:0/1:13
    544. 

  544. chr10	127548587	.	C	G	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=46	PL:DP:SP:GT:GQ	141,24,0:8:0:1/1:96
    545. 

  545. chr10	127685091	.	T	C	15.9	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46	PL:DP:SP:GT:GQ	47,6,0:2:0:1/1:49
    546. 

  546. chr10	127843740	.	G	T	25	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47	PL:DP:SP:GT:GQ	57,9,0:3:0:1/1:63
    547. 

  547. chr10	128209769	.	T	C	35.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48	PL:DP:SP:GT:GQ	68,12,0:4:0:1/1:72
    548. 

  548. chr10	128209797	.	C	T	41.2	.	DP=7;AF1=0.5207;CI95=0.5,1;DP4=1,0,4,1;MQ=48;PV4=1,0.19,0.34,1	PL:DP:SP:GT:GQ	71,0,11:6:0:0/1:14
    549. 

  549. chr10	128209959	.	G	T	94	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=47	PL:DP:SP:GT:GQ	127,42,0:14:0:1/1:99
    550. 

  550. chr10	128973671	.	C	G	46	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=4,4,0,10;MQ=48;PV4=0.023,0.012,0.00052,1	PL:DP:SP:GT:GQ	76,0,153:18:16:0/1:79
    551. 

  551. chr10	128974621	.	C	T	35.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	68,12,0:4:0:1/1:72
    552. 

  552. chr10	129846010	.	G	A	97	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,22,4;MQ=50	PL:DP:SP:GT:GQ	130,78,0:26:0:1/1:99
    553. 

  553. chr10	129854369	.	T	C	99	.	DP=21;AF1=1;CI95=1,1;DP4=1,0,17,0;MQ=47;PV4=1,1,0.033,1	PL:DP:SP:GT:GQ	136,28,0:18:0:1/1:99
    554. 

  554. chr10	129903522	.	C	G	56	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,9;MQ=48;PV4=0.027,0.075,0.051,1	PL:DP:SP:GT:GQ	86,0,85:14:16:0/1:85
    555. 

  555. chr10	129908727	.	A	T	62	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,1,0,12;MQ=48;PV4=2e-05,0.0041,0.00047,1	PL:DP:SP:GT:GQ	92,0,193:22:47:0/1:95
    556. 

  556. chr10	130691338	.	T	G	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,16,1;MQ=46	PL:DP:SP:GT:GQ	176,51,0:17:0:1/1:99
    557. 

  557. chr10	134016115	.	G	A	93.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=1,0,6,0;MQ=45;PV4=1,1,1,1	PL:DP:SP:GT:GQ	125,7,0:7:0:1/1:57
    558. 

  558. chr10	134071848	.	A	G	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    559. 

  559. chr10	134161633	.	A	G	42	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=46	PL:DP:SP:GT:GQ	74,9,0:3:0:1/1:63
    560. 

  560. chr10	134622408	.	T	C	45.3	.	DP=24;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48	PL:DP:SP:GT:GQ	78,15,0:5:0:1/1:75
    561. 

  561. chr10	134750604	.	C	A	95.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=42	PL:DP:SP:GT:GQ	128,12,0:4:0:1/1:72
    562. 

  562. chr10	134755298	.	C	G	13.2	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	45,9,0:3:0:1/1:63
    563. 

  563. chr10	135053123	.	A	G	84	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=48	PL:DP:SP:GT:GQ	117,36,0:12:0:1/1:99
    564. 

  564. chr10	135076523	.	C	A	13	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    565. 

  565. chr10	135076596	.	T	C	99	.	DP=34;AF1=1;CI95=1,1;DP4=0,1,12,15;MQ=46;PV4=1,1,0.014,1	PL:DP:SP:GT:GQ	255,67,0:28:0:1/1:99
    566. 

  566. chr10	135077311	.	C	G	14.7	.	DP=4;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,2;MQ=47;PV4=1,1,0.29,0.11	PL:DP:SP:GT:GQ	44,0,6:3:0:0/1:8
    567. 

  567. chr10	135082346	.	A	G	37.3	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49	PL:DP:SP:GT:GQ	70,15,0:5:0:1/1:75
    568. 

  568. chr10	135084601	.	T	C	92.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=45	PL:DP:SP:GT:GQ	125,18,0:6:0:1/1:90
    569. 

  569. chr10	135086380	.	C	T	67.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=46	PL:DP:SP:GT:GQ	100,12,0:4:0:1/1:72
    570. 

  570. chr10	135096784	.	A	G	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,1,0,18;MQ=45;PV4=1,1,0.006,1	PL:DP:SP:GT:GQ	182,37,0:19:0:1/1:99
    571. 

  571. chr10	135165790	.	A	G	99	.	DP=25;AF1=1;CI95=0.5,1;DP4=1,1,5,11;MQ=46;PV4=1,1,0.02,1	PL:DP:SP:GT:GQ	242,12,0:18:0:1/1:72
    572. 

  572. chr10	135179458	.	G	C	99	.	DP=40;AF1=1;CI95=1,1;DP4=1,0,25,10;MQ=47;PV4=1,1,0.16,1	PL:DP:SP:GT:GQ	255,86,0:36:0:1/1:99
    573. 

  573. chr10	135180430	.	A	G	79.1	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,2,5;MQ=48	PL:DP:SP:GT:GQ	112,21,0:7:0:1/1:84
    574. 

  574. chr10	135233541	.	A	G	99	.	DP=37;AF1=1;CI95=0.5,1;DP4=1,2,4,15;MQ=45;PV4=1,1,1,1	PL:DP:SP:GT:GQ	202,7,0:22:0:1/1:57
    575. 

  575. chr10	135347397	.	T	C	86	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=48	PL:DP:SP:GT:GQ	119,24,0:8:0:1/1:96
    576. 

  576. chr11	193194	.	T	C	68	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,11;MQ=48;PV4=1,8.7e-06,0.0043,1	PL:DP:SP:GT:GQ	98,0,131:16:0:0/1:99
    577. 

  577. chr11	237087	.	A	G	17.1	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,4,1,2;MQ=49;PV4=0.43,0.05,0.034,1	PL:DP:SP:GT:GQ	47,0,101:7:0:0/1:50
    578. 

  578. chr11	243987	.	G	A	99	.	DP=15;AF1=0.9966;CI95=0.5,1;DP4=1,0,6,0;MQ=44;PV4=1,1,0,1	PL:DP:SP:GT:GQ	137,1,0:7:0:1/1:23
    579. 

  579. chr11	244129	.	C	T	71.2	.	DP=9;AF1=0.5263;CI95=0.5,1;DP4=1,0,4,1;MQ=45;PV4=1,1,0.17,1	PL:DP:SP:GT:GQ	101,0,10:6:0:0/1:13
    580. 

  580. chr11	244197	.	T	C	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,4,8;MQ=45	PL:DP:SP:GT:GQ	216,36,0:12:0:1/1:99
    581. 

  581. chr11	244490	.	ATACCTTTTAGTACCTTTTAG	ATACCTTTTAG	99	.	INDEL;DP=37;AF1=0.5;CI95=0.5,0.5;DP4=2,11,0,7;MQ=50;PV4=0.52,0.078,1,1	PL:DP:SP:GT:GQ	164,0,255:20:3:0/1:99
    582. 

  582. chr11	293001	.	AGG	AGGG	91.7	.	INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50	PL:DP:SP:GT:GQ	132,15,0:5:0:1/1:75
    583. 

  583. chr11	396701	.	C	T	57.1	.	DP=16;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	90,18,0:6:0:1/1:90
    584. 

  584. chr11	400109	.	A	G	40	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=46	PL:DP:SP:GT:GQ	72,9,0:3:0:1/1:63
    585. 

  585. chr11	428385	.	A	G	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=46	PL:DP:SP:GT:GQ	134,18,0:6:0:1/1:90
    586. 

  586. chr11	433387	.	A	G	8.44	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    587. 

  587. chr11	549959	.	C	T	27	.	DP=16;AF1=0.5003;CI95=0.5,0.5;DP4=1,1,2,3;MQ=50;PV4=1,0.12,1,1	PL:DP:SP:GT:GQ	57,0,29:7:0:0/1:32
    588. 

  588. chr11	554214	.	G	C	75	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,8,1;MQ=49	PL:DP:SP:GT:GQ	108,27,0:9:0:1/1:99
    589. 

  589. chr11	617537	.	C	T	45	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,6;MQ=48;PV4=1,0.079,0.18,1	PL:DP:SP:GT:GQ	75,0,60:9:0:0/1:63
    590. 

  590. chr11	617967	.	C	G	41	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=47	PL:DP:SP:GT:GQ	73,9,0:3:0:1/1:63
    591. 

  591. chr11	618172	.	A	G	69	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,7;MQ=48;PV4=1,8.5e-06,6.3e-06,1	PL:DP:SP:GT:GQ	99,0,225:19:0:0/1:99
    592. 

  592. chr11	674458	.	G	A	88	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=10,0,10,0;MQ=48;PV4=1,1.4e-05,0.00056,1	PL:DP:SP:GT:GQ	118,0,202:20:0:0/1:99
    593. 

  593. chr11	686798	.	G	A	75	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=9,0,11,0;MQ=49;PV4=1,4.7e-06,0.0052,1	PL:DP:SP:GT:GQ	105,0,190:20:0:0/1:99
    594. 

  594. chr11	828784	.	A	G	95.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=46	PL:DP:SP:GT:GQ	128,15,0:5:0:1/1:75
    595. 

  595. chr11	838110	.	C	T	99	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=10,2,12,1;MQ=48;PV4=0.59,1.8e-05,0.00094,0.48	PL:DP:SP:GT:GQ	157,0,255:25:2:0/1:99
    596. 

  596. chr11	840319	.	C	T	99	.	DP=8;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=46;PV4=1,1,0,1	PL:DP:SP:GT:GQ	133,0,72:8:0:0/1:75
    597. 

  597. chr11	866498	.	T	C	25	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47	PL:DP:SP:GT:GQ	57,9,0:3:0:1/1:63
    598. 

  598. chr11	870446	.	G	A	51.3	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=49	PL:DP:SP:GT:GQ	84,15,0:5:0:1/1:75
    599. 

  599. chr11	902381	.	C	G	57	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,7;MQ=46;PV4=1,1,1,0.0096	PL:DP:SP:GT:GQ	87,0,38:11:0:0/1:41
    600. 

  600. chr11	1651830	.	G	T	42.3	.	DP=36;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49	PL:DP:SP:GT:GQ	75,15,0:5:0:1/1:75
    601. 

  601. chr11	1857173	.	T	C	99	.	DP=35;AF1=1;CI95=1,1;DP4=0,0,9,21;MQ=48	PL:DP:SP:GT:GQ	255,90,0:30:0:1/1:99
    602. 

  602. chr11	1901467	.	A	C	7.59	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=49	PL:DP:SP:GT:GQ	38,6,0:2:0:1/1:49
    603. 

  603. chr11	1944202	.	A	G	99	.	DP=36;AF1=1;CI95=1,1;DP4=0,0,10,21;MQ=48	PL:DP:SP:GT:GQ	250,93,0:31:0:1/1:99
    604. 

  604. chr11	1947793	.	C	T	19.1	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,9;MQ=49;PV4=1,4.6e-11,1,0.42	PL:DP:SP:GT:GQ	49,0,116:13:0:0/1:52
    605. 

  605. chr11	1950302	.	A	G	80	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,20,0;MQ=49	PL:DP:SP:GT:GQ	113,60,0:20:0:1/1:99
    606. 

  606. chr11	1977552	.	G	T	18.1	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,5;MQ=47;PV4=1,0.12,0.32,0.15	PL:DP:SP:GT:GQ	48,0,116:12:0:0/1:51
    607. 

  607. chr11	1977557	.	C	T	33	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,6;MQ=48;PV4=1,1,0.08,1	PL:DP:SP:GT:GQ	63,0,37:10:0:0/1:40
    608. 

  608. chr11	2427211	.	G	A	45	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=13,0,14,0;MQ=49;PV4=1,1.3e-18,7.8e-06,0.31	PL:DP:SP:GT:GQ	75,0,225:27:0:0/1:78
    609. 

  609. chr11	2427291	.	A	C	12.5	.	DP=60;AF1=0.5263;CI95=0.5,1;DP4=1,0,5,1;MQ=49;PV4=1,0.054,0.29,1	PL:DP:SP:GT:GQ	42,0,10:7:0:0/1:13
    610. 

  610. chr11	2439542	.	A	G	75	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43	PL:DP:SP:GT:GQ	107,9,0:3:0:1/1:63
    611. 

  611. chr11	2441686	.	TGG	TGGG	29.2	.	INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=50	PL:DP:SP:GT:GQ	68,6,0:2:0:1/1:49
    612. 

  612. chr11	2868878	.	T	C	33.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	66,12,0:4:0:1/1:72
    613. 

  613. chr11	3026692	.	T	G	52.5	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45	PL:DP:SP:GT:GQ	85,12,0:4:0:1/1:72
    614. 

  614. chr11	3039921	.	A	G	5.46	.	DP=24;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,1,3;MQ=46;PV4=1,0.25,0.12,1	PL:DP:SP:GT:GQ	34,0,90:8:0:0/1:37
    615. 

  615. chr11	3059441	.	A	G	23	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=8,4,0,6;MQ=48;PV4=0.013,0.003,0.00076,1	PL:DP:SP:GT:GQ	53,0,255:18:19:0/1:56
    616. 

  616. chr11	3063448	.	C	A	49	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,3,0,6;MQ=48;PV4=0.18,0.37,0.00011,1	PL:DP:SP:GT:GQ	79,0,110:12:7:0/1:82
    617. 

  617. chr11	3249829	.	G	A	61	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=6,1,8,3;MQ=49;PV4=1,5.7e-06,0.09,1	PL:DP:SP:GT:GQ	91,0,179:18:0:0/1:94
    618. 

  618. chr11	3381843	.	A	G	60.1	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	93,18,0:6:0:1/1:90
    619. 

  619. chr11	3392745	.	G	A	79	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=49	PL:DP:SP:GT:GQ	112,42,0:14:0:1/1:99
    620. 

  620. chr11	3661585	.	ATGG	ATGGTGG	99	.	INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=50	PL:DP:SP:GT:GQ	157,12,0:4:0:1/1:72
    621. 

  621. chr11	3994172	.	A	G	99	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=7,2,0,10;MQ=47;PV4=0.00071,0.35,1.1e-05,1	PL:DP:SP:GT:GQ	131,0,168:19:31:0/1:99
    622. 

  622. chr11	4104060	.	A	C	94	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=46	PL:DP:SP:GT:GQ	127,27,0:9:0:1/1:99
    623. 

  623. chr11	4123345	.	C	G	98	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=47	PL:DP:SP:GT:GQ	131,27,0:9:0:1/1:99
    624. 

  624. chr11	4128751	.	C	G	21	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=3,9,0,4;MQ=48;PV4=0.53,0.11,0.0037,1	PL:DP:SP:GT:GQ	51,0,254:16:3:0/1:54
    625. 

  625. chr11	4133317	.	C	A	64.1	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=47	PL:DP:SP:GT:GQ	97,18,0:6:0:1/1:90
    626. 

  626. chr11	4389404	.	AGGG	AGG	99	.	INDEL;DP=34;AF1=0.5;CI95=0.5,0.5;DP4=7,6,8,7;MQ=50;PV4=1,2.8e-07,1,0.012	PL:DP:SP:GT:GQ	196,0,213:28:0:0/1:99
    627. 

  627. chr11	4496916	.	C	T	76	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,6;MQ=47;PV4=1,0.017,0.0011,0.22	PL:DP:SP:GT:GQ	106,0,113:10:0:0/1:99
    628. 

  628. chr11	4566518	.	T	C	19.1	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,3,0,4;MQ=47;PV4=0.44,0.078,0.074,1	PL:DP:SP:GT:GQ	49,0,126:9:4:0/1:52
    629. 

  629. chr11	4566711	.	C	T	99	.	DP=46;AF1=0.5;CI95=0.5,0.5;DP4=19,7,3,11;MQ=49;PV4=0.0027,3.2e-12,1.2e-16,1	PL:DP:SP:GT:GQ	132,0,255:40:26:0/1:99
    630. 

  630. chr11	4622207	.	G	A	6.98	.	DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=2,1,3,0;MQ=49;PV4=1,0.15,0.44,1	PL:DP:SP:GT:GQ	36,0,75:6:0:0/1:39
    631. 

  631. chr11	4622208	.	G	A	10.4	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=5,0,3,0;MQ=49;PV4=1,1,0.09,0.14	PL:DP:SP:GT:GQ	40,0,63:8:0:0/1:43
    632. 

  632. chr11	4623279	.	A	G	57.3	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=47	PL:DP:SP:GT:GQ	90,15,0:5:0:1/1:75
    633. 

  633. chr11	4624394	.	T	C	51.1	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=49	PL:DP:SP:GT:GQ	84,18,0:6:0:1/1:90
    634. 

  634. chr11	4967468	.	G	A	99	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=42	PL:DP:SP:GT:GQ	178,15,0:5:0:1/1:75
    635. 

  635. chr11	5020416	.	A	G	27.2	.	DP=70;AF1=0.5163;CI95=0.5,1;DP4=1,1,4,1;MQ=50;PV4=1,1,0.19,1	PL:DP:SP:GT:GQ	57,0,12:7:0:0/1:15
    636. 

  636. chr11	5141980	.	A	G	99	.	DP=39;AF1=1;CI95=1,1;DP4=0,1,7,27;MQ=47;PV4=1,0.088,0.18,1	PL:DP:SP:GT:GQ	255,66,0:35:0:1/1:99
    637. 

  637. chr11	5269584	.	T	A	29	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=48	PL:DP:SP:GT:GQ	61,9,0:3:0:1/1:63
    638. 

  638. chr11	5322737	.	A	G	99	.	DP=61;AF1=0.5;CI95=0.5,0.5;DP4=11,14,10,6;MQ=48;PV4=0.34,0.0086,5e-16,1	PL:DP:SP:GT:GQ	255,0,255:41:5:0/1:99
    639. 

  639. chr11	5323071	.	C	T	99	.	DP=45;AF1=1;CI95=1,1;DP4=1,1,26,10;MQ=43;PV4=0.5,0.35,0.00034,1	PL:DP:SP:GT:GQ	255,36,0:38:3:1/1:99
    640. 

  640. chr11	5336716	.	T	A	29	.	DP=5;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=45;PV4=1,0.053,0.25,0.097	PL:DP:SP:GT:GQ	59,0,38:4:0:0/1:41
    641. 

  641. chr11	5344561	.	G	A	52	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	85,24,0:8:0:1/1:96
    642. 

  642. chr11	5344772	.	T	C	38.1	.	DP=31;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49	PL:DP:SP:GT:GQ	71,18,0:6:0:1/1:90
    643. 

  643. chr11	5344902	.	C	G	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,6,13;MQ=48	PL:DP:SP:GT:GQ	211,57,0:19:0:1/1:99
    644. 

  644. chr11	5345170	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,6,8;MQ=48	PL:DP:SP:GT:GQ	198,42,0:14:0:1/1:99
    645. 

  645. chr11	5345486	.	G	A	8.44	.	DP=23;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    646. 

  646. chr11	5358619	.	C	T	4.75	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	35,9,0:3:0:1/1:63
    647. 

  647. chr11	5474885	.	A	G	6.98	.	DP=31;AF1=0.4999;CI95=0.5,0.5;DP4=7,6,0,5;MQ=50;PV4=0.1,0.012,0.0089,1	PL:DP:SP:GT:GQ	36,0,255:18:10:0/1:39
    648. 

  648. chr11	5510284	.	A	G	70.8	.	DP=55;AF1=1;CI95=0.5,1;DP4=1,0,4,5;MQ=49;PV4=1,0.32,0.3,1	PL:DP:SP:GT:GQ	103,10,0:10:0:1/1:60
    649. 

  649. chr11	5510341	.	C	T	99	.	DP=72;AF1=1;CI95=1,1;DP4=1,0,38,23;MQ=49;PV4=1,0.42,0.36,1	PL:DP:SP:GT:GQ	201,167,0:62:0:1/1:99
    650. 

  650. chr11	5510497	.	T	C	99	.	DP=55;AF1=1;CI95=1,1;DP4=1,0,8,4;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	153,23,0:13:0:1/1:92
    651. 

  651. chr11	5510626	.	T	C	47.8	.	DP=69;AF1=1;CI95=0.5,1;DP4=0,1,0,8;MQ=49;PV4=1,1,0.28,1	PL:DP:SP:GT:GQ	80,10,0:9:0:1/1:60
    652. 

  652. chr11	5510928	.	G	A	61	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=49	PL:DP:SP:GT:GQ	94,33,0:11:0:1/1:99
    653. 

  653. chr11	5536537	.	A	C	20.6	.	DP=29;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	53,12,0:4:0:1/1:72
    654. 

  654. chr11	5566112	.	C	T	12.3	.	DP=49;AF1=0.5;CI95=0.5,0.5;DP4=14,7,3,3;MQ=49;PV4=0.64,0.0011,3.2e-05,1	PL:DP:SP:GT:GQ	42,0,255:27:2:0/1:45
    655. 

  655. chr11	5566365	.	T	C	99	.	DP=58;AF1=1;CI95=1,1;DP4=0,1,30,18;MQ=48;PV4=0.39,1,0.16,1	PL:DP:SP:GT:GQ	255,123,0:49:0:1/1:99
    656. 

  656. chr11	5573193	.	A	T	56	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=7,2,4,1;MQ=48;PV4=1,0.022,0.0013,1	PL:DP:SP:GT:GQ	86,0,231:14:0:0/1:89
    657. 

  657. chr11	5593467	.	A	G	13.9	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	45,6,0:2:0:1/1:49
    658. 

  658. chr11	5602275	.	A	G	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=9,3,10,4;MQ=49;PV4=1,2.9e-15,0.0026,1	PL:DP:SP:GT:GQ	139,0,255:26:0:0/1:99
    659. 

  659. chr11	5602605	.	G	A	99	.	DP=84;AF1=0.5;CI95=0.5,0.5;DP4=23,18,17,19;MQ=48;PV4=0.5,1.2e-23,5.2e-08,1	PL:DP:SP:GT:GQ	226,0,255:77:3:0/1:99
    660. 

  660. chr11	5602615	.	A	G	99	.	DP=84;AF1=0.5;CI95=0.5,0.5;DP4=21,19,16,20;MQ=48;PV4=0.5,1.4e-32,3.7e-07,1	PL:DP:SP:GT:GQ	168,0,255:76:3:0/1:99
    661. 

  661. chr11	5602679	.	T	C	99	.	DP=77;AF1=0.5;CI95=0.5,0.5;DP4=10,12,24,23;MQ=49;PV4=0.8,2.8e-22,0.00039,1	PL:DP:SP:GT:GQ	236,0,255:69:1:0/1:99
    662. 

  662. chr11	5602790	.	A	G	85	.	DP=71;AF1=0.5;CI95=0.5,0.5;DP4=13,15,5,12;MQ=49;PV4=0.35,3.1e-14,0.00018,1	PL:DP:SP:GT:GQ	115,0,255:45:5:0/1:99
    663. 

  663. chr11	5602968	.	G	A	99	.	DP=73;AF1=1;CI95=1,1;DP4=2,1,26,37;MQ=46;PV4=0.57,1,0.00038,1	PL:DP:SP:GT:GQ	255,122,0:66:2:1/1:99
    664. 

  664. chr11	5632212	.	G	A	48.3	.	DP=61;AF1=0.543;CI95=0.5,1;DP4=1,0,1,4;MQ=48;PV4=0.33,0.21,0.15,1	PL:DP:SP:GT:GQ	78,0,8:6:0:0/1:11
    665. 

  665. chr11	5692817	.	T	G	30	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	62,9,0:3:0:1/1:63
    666. 

  666. chr11	5701409	.	G	C	99	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=3,16,0,9;MQ=48;PV4=0.53,9e-06,2.7e-18,1	PL:DP:SP:GT:GQ	136,0,255:28:3:0/1:99
    667. 

  667. chr11	5717762	.	T	C	99	.	DP=37;AF1=1;CI95=1,1;DP4=0,1,16,13;MQ=46;PV4=0.47,0.0026,0.031,1	PL:DP:SP:GT:GQ	255,40,0:30:0:1/1:99
    668. 

  668. chr11	5718517	.	G	A	27.5	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	60,12,0:4:0:1/1:72
    669. 

  669. chr11	5758062	.	T	C	99	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=4,2,6,5;MQ=48;PV4=1,1.8e-07,0.022,1	PL:DP:SP:GT:GQ	150,0,193:17:0:0/1:99
    670. 

  670. chr11	5758118	.	A	C	16.1	.	DP=33;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,0,4;MQ=49;PV4=0.33,0.085,0.2,1	PL:DP:SP:GT:GQ	46,0,35:6:0:0/1:38
    671. 

  671. chr11	5776470	.	T	G	22	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=50	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    672. 

  672. chr11	5809548	.	G	A	99	.	DP=51;AF1=0.5;CI95=0.5,0.5;DP4=8,19,11,11;MQ=49;PV4=0.24,1.7e-22,1.7e-05,1	PL:DP:SP:GT:GQ	205,0,255:49:6:0/1:99
    673. 

  673. chr11	5841856	.	C	T	99	.	DP=52;AF1=0.5;CI95=0.5,0.5;DP4=10,18,6,9;MQ=48;PV4=1,1.9e-17,1e-10,1	PL:DP:SP:GT:GQ	185,0,255:43:0:0/1:99
    674. 

  674. chr11	5842356	.	A	G	99	.	DP=39;AF1=0.5;CI95=0.5,0.5;DP4=14,6,13,3;MQ=47;PV4=0.7,0.00011,1.1e-12,1	PL:DP:SP:GT:GQ	245,0,255:36:2:0/1:99
    675. 

  675. chr11	5842628	.	T	C	30.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=45	PL:DP:SP:GT:GQ	62,6,0:2:0:1/1:49
    676. 

  676. chr11	5906048	.	G	A	99	.	DP=63;AF1=0.5;CI95=0.5,0.5;DP4=18,18,13,13;MQ=48;PV4=1,1.1e-18,3.2e-18,1	PL:DP:SP:GT:GQ	211,0,255:62:0:0/1:99
    677. 

  677. chr11	5906143	.	T	C	99	.	DP=56;AF1=0.5;CI95=0.5,0.5;DP4=17,10,17,10;MQ=49;PV4=1,1.4e-14,0.00013,1	PL:DP:SP:GT:GQ	203,0,255:54:0:0/1:99
    678. 

  678. chr11	5906192	.	A	C	99	.	DP=76;AF1=0.5;CI95=0.5,0.5;DP4=16,25,19,12;MQ=49;PV4=0.095,4.4e-20,1.3e-08,1	PL:DP:SP:GT:GQ	164,0,255:72:10:0/1:99
    679. 

  679. chr11	5968728	.	T	C	99	.	DP=35;AF1=0.5;CI95=0.5,0.5;DP4=8,8,12,4;MQ=46;PV4=0.27,0.0054,5.7e-13,1	PL:DP:SP:GT:GQ	255,0,255:32:6:0/1:99
    680. 

  680. chr11	6220376	.	G	C	43.2	.	DP=17;AF1=1;CI95=0.5,1;DP4=1,0,15,0;MQ=49;PV4=1,0.0019,0.36,0.033	PL:DP:SP:GT:GQ	75,8,0:16:0:1/1:56
    681. 

  681. chr11	6239344	.	G	A	99	.	DP=9;AF1=0.5;CI95=0.5,0.5;DP4=2,1,2,3;MQ=45;PV4=1,0.038,6.4e-06,1	PL:DP:SP:GT:GQ	155,0,110:8:0:0/1:99
    682. 

  682. chr11	6520015	.	G	T	42.2	.	DP=23;AF1=1;CI95=0.5,1;DP4=0,1,8,0;MQ=49;PV4=0.11,1,0.26,1	PL:DP:SP:GT:GQ	74,8,0:9:0:1/1:56
    683. 

  683. chr11	6520164	.	T	A	99	.	DP=29;AF1=1;CI95=1,1;DP4=0,1,9,13;MQ=47;PV4=1,0.47,0.11,1	PL:DP:SP:GT:GQ	255,41,0:23:0:1/1:99
    684. 

  684. chr11	6622714	.	G	A	99	.	DP=66;AF1=1;CI95=1,1;DP4=1,0,35,20;MQ=48;PV4=1,0.3,0.17,1	PL:DP:SP:GT:GQ	255,140,0:56:0:1/1:99
    685. 

  685. chr11	6629530	.	G	A	83	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=5,10,4,7;MQ=49;PV4=1,2.3e-09,0.0074,0.32	PL:DP:SP:GT:GQ	113,0,255:26:0:0/1:99
    686. 

  686. chr11	6629665	.	C	T	99	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=16,12,10,10;MQ=49;PV4=0.77,9.6e-16,6.5e-07,1	PL:DP:SP:GT:GQ	195,0,255:48:1:0/1:99
    687. 

  687. chr11	6629729	.	C	G	17.1	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=2,10,0,5;MQ=48;PV4=1,0.17,0.21,1	PL:DP:SP:GT:GQ	47,0,185:17:0:0/1:50
    688. 

  688. chr11	6629738	.	A	G	20	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=49;PV4=1,0.1,0.035,1	PL:DP:SP:GT:GQ	50,0,118:13:0:0/1:53
    689. 

  689. chr11	6630028	.	TCCCCC	TCCCC	14.7	.	INDEL;DP=10;AF1=0.505;CI95=0.5,0.5;DP4=2,0,5,0;MQ=50;PV4=1,0.44,1,1	PL:DP:SP:GT:GQ	52,0,17:7:0:0/1:20
    690. 

  690. chr11	6630833	.	G	A	76	.	DP=37;AF1=0.5;CI95=0.5,0.5;DP4=4,18,3,6;MQ=49;PV4=0.38,0.061,6.3e-05,1	PL:DP:SP:GT:GQ	106,0,255:31:4:0/1:99
    691. 

  691. chr11	6632857	.	A	T	64	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=9,0,6,0;MQ=48;PV4=1,0.16,9.9e-05,1	PL:DP:SP:GT:GQ	94,0,162:15:0:0/1:97
    692. 

  692. chr11	6636106	.	T	A	99	.	DP=47;AF1=0.5;CI95=0.5,0.5;DP4=13,14,5,11;MQ=49;PV4=0.35,5.4e-08,1.3e-05,1	PL:DP:SP:GT:GQ	166,0,255:43:5:0/1:99
    693. 

  693. chr11	6637504	.	G	A	85	.	DP=38;AF1=0.5;CI95=0.5,0.5;DP4=13,1,22,0;MQ=45;PV4=0.39,8.6e-16,0.012,0.22	PL:DP:SP:GT:GQ	115,0,242:36:0:0/1:99
    694. 

  694. chr11	6637518	.	A	G	99	.	DP=43;AF1=1;CI95=1,1;DP4=1,1,31,4;MQ=45;PV4=0.26,1,0.4,1	PL:DP:SP:GT:GQ	238,76,0:37:6:1/1:99
    695. 

  695. chr11	6638936	.	T	G	18.1	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,2,0,7;MQ=49;PV4=0.00021,6e-06,0.0044,1	PL:DP:SP:GT:GQ	48,0,255:22:37:0/1:51
    696. 

  696. chr11	6789929	.	C	A	29	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=8,4,5,1;MQ=48;PV4=0.61,0.0011,0.048,1	PL:DP:SP:GT:GQ	59,0,255:18:2:0/1:62
    697. 

  697. chr11	6790106	.	T	C	99	.	DP=18;AF1=1;CI95=1,1;DP4=1,0,12,3;MQ=47;PV4=1,1,0.16,1	PL:DP:SP:GT:GQ	190,31,0:16:0:1/1:99
    698. 

  698. chr11	6816778	.	A	G	99	.	DP=46;AF1=1;CI95=1,1;DP4=0,1,8,5;MQ=48;PV4=0.43,0.44,1,1	PL:DP:SP:GT:GQ	147,21,0:14:0:1/1:84
    699. 

  699. chr11	6816875	.	G	A	99	.	DP=63;AF1=0.5;CI95=0.5,0.5;DP4=9,24,15,11;MQ=49;PV4=0.032,2e-18,0.00067,0.18	PL:DP:SP:GT:GQ	176,0,255:59:15:0/1:99
    700. 

  700. chr11	6865648	.	A	G	99	.	DP=24;AF1=1;CI95=1,1;DP4=1,0,14,4;MQ=47;PV4=1,0.13,0.2,1	PL:DP:SP:GT:GQ	191,25,0:19:0:1/1:99
    701. 

  701. chr11	6865831	.	A	G	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=44	PL:DP:SP:GT:GQ	255,27,0:9:0:1/1:99
    702. 

  702. chr11	6891704	.	T	C	99	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=1,11,6,7;MQ=49;PV4=0.073,0.0019,0.0065,1	PL:DP:SP:GT:GQ	141,0,214:25:11:0/1:99
    703. 

  703. chr11	6943254	.	C	T	99	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=3,8,0,9;MQ=47;PV4=0.22,0.00012,1.4e-15,1	PL:DP:SP:GT:GQ	162,0,255:20:7:0/1:99
    704. 

  704. chr11	6976988	.	A	T	99	.	DP=47;AF1=1;CI95=1,1;DP4=0,0,20,12;MQ=46	PL:DP:SP:GT:GQ	255,96,0:32:0:1/1:99
    705. 

  705. chr11	7022717	.	T	C	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=44	PL:DP:SP:GT:GQ	133,12,0:4:0:1/1:72
    706. 

  706. chr11	7059960	.	A	C	28.3	.	DP=22;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50	PL:DP:SP:GT:GQ	61,15,0:5:0:1/1:75
    707. 

  707. chr11	7063755	.	C	T	99	.	DP=55;AF1=1;CI95=1,1;DP4=0,1,16,7;MQ=48;PV4=0.33,0.19,0.3,1	PL:DP:SP:GT:GQ	189,47,0:24:0:1/1:99
    708. 

  708. chr11	7065289	.	C	A	93	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=48	PL:DP:SP:GT:GQ	126,33,0:11:0:1/1:99
    709. 

  709. chr11	7111153	.	C	A	52	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,6;MQ=48;PV4=0.061,0.22,0.011,1	PL:DP:SP:GT:GQ	82,0,107:11:12:0/1:85
    710. 

  710. chr11	7324475	.	T	C	61.3	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=48	PL:DP:SP:GT:GQ	94,15,0:5:0:1/1:75
    711. 

  711. chr11	7662732	.	C	T	99	.	DP=48;AF1=1;CI95=1,1;DP4=0,1,19,23;MQ=44;PV4=1,1,0.00047,1	PL:DP:SP:GT:GQ	255,110,0:43:0:1/1:99
    712. 

  712. chr11	7686596	.	G	A	79.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45	PL:DP:SP:GT:GQ	112,15,0:5:0:1/1:75
    713. 

  713. chr11	7687669	.	A	C	19	.	DP=23;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=50	PL:DP:SP:GT:GQ	51,9,0:3:0:1/1:63
    714. 

  714. chr11	7687715	.	T	C	91.1	.	DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,4;MQ=47	PL:DP:SP:GT:GQ	124,18,0:6:0:1/1:90
    715. 

  715. chr11	7689633	.	A	C	63	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=49	PL:DP:SP:GT:GQ	96,27,0:9:0:1/1:99
    716. 

  716. chr11	8016730	.	T	C	55	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=1,19,0,8;MQ=49;PV4=1,4.2e-07,1.1e-05,0.42	PL:DP:SP:GT:GQ	85,0,255:28:0:0/1:88
    717. 

  717. chr11	8118472	.	T	C	95	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=46	PL:DP:SP:GT:GQ	128,27,0:9:0:1/1:99
    718. 

  718. chr11	8119063	.	A	G	63.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	96,18,0:6:0:1/1:90
    719. 

  719. chr11	8122234	.	G	A	53.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47	PL:DP:SP:GT:GQ	86,15,0:5:0:1/1:75
    720. 

  720. chr11	8528082	.	g	gTCTT	12.7	.	INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    721. 

  721. chr11	8735662	.	G	A	40.5	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=47	PL:DP:SP:GT:GQ	73,12,0:4:0:1/1:72
    722. 

  722. chr11	8942999	.	G	A	99	.	DP=55;AF1=1;CI95=1,1;DP4=1,0,23,16;MQ=46;PV4=1,1,0.022,1	PL:DP:SP:GT:GQ	255,93,0:40:0:1/1:99
    723. 

  723. chr11	8948680	.	A	T	97	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=2,11,0,15;MQ=48;PV4=0.21,5.2e-12,9.2e-05,1	PL:DP:SP:GT:GQ	127,0,255:28:7:0/1:99
    724. 

  724. chr11	8950877	.	G	A	3.54	.	DP=12;AF1=0.4998;CI95=0.5,0.5;DP4=3,2,2,0;MQ=48;PV4=1,0.1,0,1	PL:DP:SP:GT:GQ	31,0,161:7:0:0/1:34
    725. 

  725. chr11	9052423	.	A	C	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,9,4;MQ=46	PL:DP:SP:GT:GQ	222,39,0:13:0:1/1:99
    726. 

  726. chr11	9229146	.	C	T	34	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=7,0,0,8;MQ=49;PV4=0.00016,5e-10,8.6e-05,0.26	PL:DP:SP:GT:GQ	64,0,181:15:38:0/1:67
    727. 

  727. chr11	9715853	.	T	G	35	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=4,3,0,7;MQ=48;PV4=0.07,0.089,0.07,1	PL:DP:SP:GT:GQ	65,0,130:14:12:0/1:68
    728. 

  728. chr11	9754221	.	C	T	99	.	DP=6;AF1=0.5002;CI95=0.5,0.5;DP4=0,1,0,5;MQ=44;PV4=1,0.028,0,0.29	PL:DP:SP:GT:GQ	133,0,32:6:0:0/1:35
    729. 

  729. chr11	9875353	.	G	T	99	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=42	PL:DP:SP:GT:GQ	146,21,0:7:0:1/1:84
    730. 

  730. chr11	9980501	.	T	C	67	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=2,3,1,9;MQ=49;PV4=0.24,3e-09,0.17,1	PL:DP:SP:GT:GQ	97,0,177:15:6:0/1:99
    731. 

  731. chr11	10024311	.	A	G	46	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,15;MQ=49;PV4=1,3e-10,0.13,0.35	PL:DP:SP:GT:GQ	76,0,173:23:0:0/1:79
    732. 

  732. chr11	10508716	.	G	C	19.1	.	DP=10;AF1=0.5008;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	49,0,25:5:0:0/1:28
    733. 

  733. chr11	10518521	.	C	T	99	.	DP=36;AF1=1;CI95=1,1;DP4=1,0,5,22;MQ=47;PV4=0.21,0.43,0.12,1	PL:DP:SP:GT:GQ	227,58,0:28:0:1/1:99
    734. 

  734. chr11	10518585	.	A	G	63	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,7,0,9;MQ=48;PV4=1,1.2e-05,0.26,1	PL:DP:SP:GT:GQ	93,0,168:16:0:0/1:96
    735. 

  735. chr11	10521850	.	G	A	67	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=39	PL:DP:SP:GT:GQ	100,24,0:8:0:1/1:96
    736. 

  736. chr11	10526060	.	C	T	22	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=48	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    737. 

  737. chr11	10786142	.	C	T	79	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=9,6,4,4;MQ=49;PV4=0.69,1.3e-06,0.001,1	PL:DP:SP:GT:GQ	109,0,255:23:2:0/1:99
    738. 

  738. chr11	10822350	.	C	T	99	.	DP=30;AF1=1;CI95=1,1;DP4=0,1,3,21;MQ=48;PV4=1,0.13,0.2,1	PL:DP:SP:GT:GQ	187,44,0:25:0:1/1:99
    739. 

  739. chr11	10823815	.	C	T	99	.	DP=57;AF1=1;CI95=1,1;DP4=0,0,36,10;MQ=47	PL:DP:SP:GT:GQ	255,138,0:46:0:1/1:99
    740. 

  740. chr11	10828490	.	TAA	TAAA	99	.	INDEL;DP=20;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=50	PL:DP:SP:GT:GQ	196,48,0:16:0:1/1:99
    741. 

  741. chr11	11158985	.	TCA	TCAGAACA	99	.	INDEL;DP=13;AF1=0.5554;CI95=0.5,1;DP4=1,1,6,1;MQ=50;PV4=0.42,1,1,1	PL:DP:SP:GT:GQ	140,0,7:9:4:0/1:10
    742. 

  742. chr11	11158986	.	CA	CAGAAGA	99	.	INDEL;DP=13;AF1=0.5554;CI95=0.5,1;DP4=1,1,6,1;MQ=50;PV4=0.42,1,1,1	PL:DP:SP:GT:GQ	215,0,7:9:4:0/1:10
    743. 

  743. chr11	11171659	.	T	C	19.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	51,6,0:2:0:1/1:49
    744. 

  744. chr11	11314538	.	C	T	99	.	DP=31;AF1=1;CI95=1,1;DP4=1,1,19,3;MQ=46;PV4=0.31,1,0.0066,1	PL:DP:SP:GT:GQ	212,25,0:24:5:1/1:99
    745. 

  745. chr11	11348828	.	A	G	7.8	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	37,3,0:1:0:1/1:41
    746. 

  746. chr11	11373633	.	GG	GGTG	12.7	.	INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    747. 

  747. chr11	11374013	.	CAAT	C	12.7	.	INDEL;DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    748. 

  748. chr11	11905993	.	C	T	57	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,16,0;MQ=50	PL:DP:SP:GT:GQ	90,48,0:16:0:1/1:99
    749. 

  749. chr11	12265542	.	A	G	99	.	DP=61;AF1=0.5;CI95=0.5,0.5;DP4=18,15,10,13;MQ=47;PV4=0.59,2.4e-09,1.3e-30,1	PL:DP:SP:GT:GQ	255,0,255:56:2:0/1:99
    750. 

  750. chr11	12313887	.	C	G	91	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,2,6;MQ=48	PL:DP:SP:GT:GQ	124,24,0:8:0:1/1:96
    751. 

  751. chr11	12315186	.	G	A	53	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,1,7,0;MQ=48;PV4=0.36,0.00015,3.8e-05,1	PL:DP:SP:GT:GQ	83,0,134:11:0:0/1:86
    752. 

  752. chr11	12315848	.	C	T	70	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=1,6,2,6;MQ=49;PV4=1,2.7e-06,0.007,1	PL:DP:SP:GT:GQ	100,0,205:15:0:0/1:99
    753. 

  753. chr11	12315891	.	G	A	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,1,18;MQ=49	PL:DP:SP:GT:GQ	156,57,0:19:0:1/1:99
    754. 

  754. chr11	12345459	.	C	T	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43	PL:DP:SP:GT:GQ	149,15,0:5:0:1/1:75
    755. 

  755. chr11	12379792	.	G	C	9.2	.	DP=17;AF1=0.5939;CI95=0.5,1;DP4=1,0,3,0;MQ=49;PV4=1,1,0.33,1	PL:DP:SP:GT:GQ	38,0,5:4:0:0/1:7
    756. 

  756. chr11	13402672	.	A	C	18.1	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,1,4,0;MQ=48;PV4=0.33,0.1,0.19,1	PL:DP:SP:GT:GQ	48,0,52:6:0:0/1:50
    757. 

  757. chr11	14532338	.	C	T	95.3	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=45	PL:DP:SP:GT:GQ	128,15,0:5:0:1/1:75
    758. 

  758. chr11	14540671	.	A	G	13.2	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	45,9,0:3:0:1/1:63
    759. 

  759. chr11	15170686	.	G	A	99	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=14,1,8,3;MQ=48;PV4=0.28,2.3e-06,9.6e-05,1	PL:DP:SP:GT:GQ	145,0,255:26:6:0/1:99
    760. 

  760. chr11	15199957	.	T	C	17.1	.	DP=20;AF1=0.5016;CI95=0.5,0.5;DP4=0,2,0,6;MQ=50;PV4=1,0.015,0.3,1	PL:DP:SP:GT:GQ	47,0,22:8:0:0/1:25
    761. 

  761. chr11	17073813	.	TC	T	39.6	.	INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=31	PL:DP:SP:GT:GQ	80,18,0:6:0:1/1:90
    762. 

  762. chr11	17096059	.	A	G	47.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48	PL:DP:SP:GT:GQ	80,15,0:5:0:1/1:75
    763. 

  763. chr11	17172133	.	T	C	99	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=2,18,5,8;MQ=49;PV4=0.084,1.6e-10,0.012,1	PL:DP:SP:GT:GQ	131,0,255:33:11:0/1:99
    764. 

  764. chr11	17250019	.	G	T	84.1	.	DP=8;AF1=0.5163;CI95=0.5,1;DP4=1,0,4,1;MQ=46;PV4=1,1,0.11,0.046	PL:DP:SP:GT:GQ	114,0,12:6:0:0/1:15
    765. 

  765. chr11	17332571	.	C	G	32	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,4,0,3;MQ=48;PV4=0.5,0.23,0.0033,0.44	PL:DP:SP:GT:GQ	62,0,168:9:3:0/1:65
    766. 

  766. chr11	17408630	.	C	T	99	.	DP=47;AF1=0.5;CI95=0.5,0.5;DP4=16,3,15,9;MQ=46;PV4=0.17,1,3.6e-25,1	PL:DP:SP:GT:GQ	255,0,251:43:8:0/1:99
    767. 

  767. chr11	17418477	.	C	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,13,5;MQ=49	PL:DP:SP:GT:GQ	190,54,0:18:0:1/1:99
    768. 

  768. chr11	17436936	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=48	PL:DP:SP:GT:GQ	145,39,0:13:0:1/1:99
    769. 

  769. chr11	17491571	.	C	T	19.1	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,4,0;MQ=49;PV4=1,0,0,0.009	PL:DP:SP:GT:GQ	49,0,107:7:0:0/1:52
    770. 

  770. chr11	17505652	.	C	T	10.4	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	40,3,0:1:0:1/1:41
    771. 

  771. chr11	17981047	.	C	T	99	.	DP=42;AF1=1;CI95=1,1;DP4=2,0,5,26;MQ=44;PV4=0.04,1,0.19,0.026	PL:DP:SP:GT:GQ	255,51,0:33:14:1/1:99
    772. 

  772. chr11	18047255	.	G	T	39	.	DP=37;AF1=0.5;CI95=0.5,0.5;DP4=5,13,1,14;MQ=50;PV4=0.19,5.7e-19,0.035,0.48	PL:DP:SP:GT:GQ	69,0,255:33:7:0/1:72
    773. 

  773. chr11	18105302	.	T	C	99	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,11,0,13;MQ=47;PV4=1,5.4e-07,4.6e-06,1	PL:DP:SP:GT:GQ	140,0,210:24:0:0/1:99
    774. 

  774. chr11	18158993	.	T	C	99	.	DP=47;AF1=0.5;CI95=0.5,0.5;DP4=9,8,16,6;MQ=49;PV4=0.31,6.7e-10,0.0065,1	PL:DP:SP:GT:GQ	174,0,255:39:5:0/1:99
    775. 

  775. chr11	18195051	.	T	C	62.1	.	DP=32;AF1=1;CI95=0.5,1;DP4=0,0,3,3;MQ=49	PL:DP:SP:GT:GQ	95,18,0:6:0:1/1:90
    776. 

  776. chr11	18231348	.	G	T	6.2	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=49;PV4=1,0.38,0.28,0.13	PL:DP:SP:GT:GQ	35,0,37:6:0:0/1:36
    777. 

  777. chr11	18253176	.	C	T	99	.	DP=40;AF1=1;CI95=1,1;DP4=2,0,14,16;MQ=45;PV4=0.48,1,0.0018,1	PL:DP:SP:GT:GQ	255,56,0:32:3:1/1:99
    778. 

  778. chr11	18267463	.	A	G	65	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,1;MQ=48;PV4=1,0.00017,0.11,1	PL:DP:SP:GT:GQ	95,0,61:9:0:0/1:64
    779. 

  779. chr11	18317458	.	T	A	67	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,0,6,0;MQ=47;PV4=1,0.00042,0.018,0.26	PL:DP:SP:GT:GQ	97,0,126:10:0:0/1:99
    780. 

  780. chr11	18317699	.	C	T	48	.	DP=9;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,4;MQ=47;PV4=1,1,0.099,0.24	PL:DP:SP:GT:GQ	78,0,34:6:0:0/1:37
    781. 

  781. chr11	18361187	.	T	C	19.1	.	DP=16;AF1=0.5001;CI95=0.5,0.5;DP4=0,2,0,3;MQ=47;PV4=1,0.43,0.16,0.09	PL:DP:SP:GT:GQ	49,0,34:5:0:0/1:37
    782. 

  782. chr11	18427099	.	C	A	8.64	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=11,7,0,9;MQ=48;PV4=0.003,0.043,8.6e-05,0.086	PL:DP:SP:GT:GQ	38,0,252:27:25:0/1:41
    783. 

  783. chr11	18467821	.	T	C	62	.	DP=29;AF1=1;CI95=0.5,1;DP4=0,1,10,0;MQ=47;PV4=0.091,0.4,0.12,1	PL:DP:SP:GT:GQ	94,9,0:11:0:1/1:63
    784. 

  784. chr11	18732426	.	T	G	23	.	DP=23;AF1=0.6671;CI95=0.5,1;DP4=1,0,0,4;MQ=49;PV4=0.2,1,0.26,0.33	PL:DP:SP:GT:GQ	52,0,3:5:0:0/1:5
    785. 

  785. chr11	18735947	.	T	C	99	.	DP=46;AF1=1;CI95=1,1;DP4=1,0,25,12;MQ=46;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	255,97,0:38:0:1/1:99
    786. 

  786. chr11	18738281	.	C	T	99	.	DP=62;AF1=1;CI95=1,1;DP4=1,1,28,22;MQ=48;PV4=1,1,0.083,1	PL:DP:SP:GT:GQ	236,113,0:52:0:1/1:99
    787. 

  787. chr11	18754679	.	A	G	42	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=13,0,6,0;MQ=49;PV4=1,0.0001,0.0017,0.2	PL:DP:SP:GT:GQ	72,0,225:19:0:0/1:75
    788. 

  788. chr11	18893056	.	T	A	37.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	70,12,0:4:0:1/1:72
    789. 

  789. chr11	18994005	.	T	C	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,8,1;MQ=45	PL:DP:SP:GT:GQ	189,27,0:9:0:1/1:99
    790. 

  790. chr11	19256250	.	C	T	99	.	DP=24;AF1=1;CI95=1,1;DP4=1,0,18,1;MQ=48;PV4=1,0.22,0.21,1	PL:DP:SP:GT:GQ	135,32,0:20:0:1/1:99
    791. 

  791. chr11	19970558	.	T	C	99	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=44	PL:DP:SP:GT:GQ	136,18,0:6:0:1/1:90
    792. 

  792. chr11	19970579	.	C	T	24.8	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=38	PL:DP:SP:GT:GQ	56,6,0:2:0:1/1:49
    793. 

  793. chr11	20099112	.	A	T	99	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,13,6;MQ=43	PL:DP:SP:GT:GQ	255,57,0:19:0:1/1:99
    794. 

  794. chr11	20101704	.	C	T	99	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,7,14;MQ=49	PL:DP:SP:GT:GQ	181,63,0:21:0:1/1:99
    795. 

  795. chr11	20101744	.	C	A	58.1	.	DP=10;AF1=0.5163;CI95=0.5,1;DP4=0,1,2,2;MQ=47;PV4=1,1,0.17,1	PL:DP:SP:GT:GQ	88,0,12:5:0:0/1:15
    796. 

  796. chr11	20112649	.	G	A	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=46	PL:DP:SP:GT:GQ	161,36,0:12:0:1/1:99
    797. 

  797. chr11	20119160	.	G	A	8.64	.	DP=53;AF1=0.5;CI95=0.5,0.5;DP4=5,22,8,0;MQ=49;PV4=5.5e-05,1.5e-05,3.3e-07,1	PL:DP:SP:GT:GQ	38,0,255:35:43:0/1:41
    798. 

  798. chr11	20124914	.	A	C	99	.	DP=69;AF1=1;CI95=1,1;DP4=1,0,30,24;MQ=49;PV4=1,0.0021,0.36,1	PL:DP:SP:GT:GQ	197,133,0:55:0:1/1:99
    799. 

  799. chr11	20129075	.	G	A	61	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=44	PL:DP:SP:GT:GQ	93,9,0:3:0:1/1:63
    800. 

  800. chr11	20403825	.	A	T	30	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	62,9,0:3:0:1/1:63
    801. 

  801. chr11	20404757	.	T	C	28	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,6,0,5;MQ=48;PV4=1,0.0099,0.013,1	PL:DP:SP:GT:GQ	58,0,138:11:0:0/1:61
    802. 

  802. chr11	20419028	.	T	C	49	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45	PL:DP:SP:GT:GQ	81,9,0:3:0:1/1:63
    803. 

  803. chr11	20419110	.	A	G	61	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=3,4,10,0;MQ=47;PV4=0.015,0.05,0.017,1	PL:DP:SP:GT:GQ	91,0,140:17:18:0/1:94
    804. 

  804. chr11	20529886	.	G	A	99	.	DP=48;AF1=1;CI95=1,1;DP4=0,1,10,8;MQ=49;PV4=0.47,0.12,0.27,1	PL:DP:SP:GT:GQ	170,31,0:19:0:1/1:99
    805. 

  805. chr11	20623156	.	C	G	45.5	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49	PL:DP:SP:GT:GQ	78,12,0:4:0:1/1:72
    806. 

  806. chr11	20639400	.	A	G	99	.	DP=60;AF1=1;CI95=1,1;DP4=0,1,11,38;MQ=43;PV4=1,1,2.1e-06,1	PL:DP:SP:GT:GQ	255,124,0:50:0:1/1:99
    807. 

  807. chr11	20639449	.	CTAAG	CTAAGTAAG	99	.	INDEL;DP=45;AF1=0.5;CI95=0.5,0.5;DP4=5,13,2,14;MQ=50;PV4=0.41,0.00051,0.065,1	PL:DP:SP:GT:GQ	225,0,255:34:4:0/1:99
    808. 

  808. chr11	20639465	.	A	C	28	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=2,17,1,9;MQ=50;PV4=1,1.7e-11,0.073,1	PL:DP:SP:GT:GQ	58,0,255:29:0:0/1:61
    809. 

  809. chr11	20676253	.	T	C	39	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=11,5,3,3;MQ=49;PV4=0.62,0.00062,4.9e-08,1	PL:DP:SP:GT:GQ	69,0,255:22:2:0/1:72
    810. 

  810. chr11	20959465	.	C	A	99	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=0,12,0,14;MQ=44;PV4=1,0.29,2.3e-08,1	PL:DP:SP:GT:GQ	184,0,213:26:0:0/1:99
    811. 

  811. chr11	20959482	.	G	C	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=41	PL:DP:SP:GT:GQ	141,48,0:16:0:1/1:99
    812. 

  812. chr11	20981893	.	AT	ATGT	12.7	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    813. 

  813. chr11	21581665	.	C	T	75.3	.	DP=18;AF1=0.543;CI95=0.5,1;DP4=1,0,12,1;MQ=47;PV4=1,7.5e-09,0.037,1	PL:DP:SP:GT:GQ	105,0,8:14:0:0/1:11
    814. 

  814. chr11	22242729	.	T	C	99	.	DP=17;AF1=0.6671;CI95=0.5,1;DP4=0,2,1,7;MQ=45;PV4=1,1,0.00022,1	PL:DP:SP:GT:GQ	156,0,3:10:0:0/1:5
    815. 

  815. chr11	22294550	.	T	G	44	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=0,6,1,8;MQ=49;PV4=1,0.031,0.024,0.46	PL:DP:SP:GT:GQ	74,0,78:15:0:0/1:76
    816. 

  816. chr11	23810855	.	T	C	21.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=47	PL:DP:SP:GT:GQ	53,6,0:2:0:1/1:49
    817. 

  817. chr11	26067594	.	C	T	73.1	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=48	PL:DP:SP:GT:GQ	106,21,0:7:0:1/1:84
    818. 

  818. chr11	26484496	.	G	C	31	.	DP=5;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,0;MQ=47;PV4=1,1,0.00029,1	PL:DP:SP:GT:GQ	61,0,79:5:0:0/1:64
    819. 

  819. chr11	26552702	.	T	C	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=47	PL:DP:SP:GT:GQ	132,24,0:8:0:1/1:96
    820. 

  820. chr11	26568966	.	A	G	99	.	DP=69;AF1=1;CI95=1,1;DP4=1,1,32,28;MQ=50;PV4=1,9e-09,0.37,1	PL:DP:SP:GT:GQ	178,123,0:62:0:1/1:99
    821. 

  821. chr11	26587133	.	T	C	99	.	DP=48;AF1=1;CI95=1,1;DP4=0,1,9,30;MQ=44;PV4=1,1,0.00014,1	PL:DP:SP:GT:GQ	255,79,0:40:0:1/1:99
    822. 

  822. chr11	26619872	.	T	C	36	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=48;PV4=1,0.032,0.16,0.13	PL:DP:SP:GT:GQ	66,0,57:6:0:0/1:59
    823. 

  823. chr11	26692742	.	G	A	99	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=9,20,3,7;MQ=48;PV4=1,0.044,1.7e-09,1	PL:DP:SP:GT:GQ	182,0,255:39:0:0/1:99
    824. 

  824. chr11	26694979	.	A	G	81	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,9,7,5;MQ=49;PV4=0.72,1.4e-11,0.0079,1	PL:DP:SP:GT:GQ	111,0,255:30:1:0/1:99
    825. 

  825. chr11	26702664	.	C	T	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,2,16;MQ=49	PL:DP:SP:GT:GQ	154,54,0:18:0:1/1:99
    826. 

  826. chr11	27077118	.	C	T	60	.	DP=26;AF1=0.5025;CI95=0.5,0.5;DP4=1,1,2,3;MQ=47;PV4=1,1,0.057,1	PL:DP:SP:GT:GQ	90,0,20:7:0:0/1:23
    827. 

  827. chr11	27149043	.	T	G	26	.	DP=14;AF1=0.6671;CI95=0.5,1;DP4=0,1,0,6;MQ=49;PV4=1,0.34,1,0.41	PL:DP:SP:GT:GQ	55,0,3:7:0:0/1:5
    828. 

  828. chr11	27390089	.	T	C	84.2	.	DP=40;AF1=1;CI95=0.5,1;DP4=1,0,2,7;MQ=48;PV4=0.3,1,0.23,1	PL:DP:SP:GT:GQ	117,16,0:10:0:1/1:80
    829. 

  829. chr11	27679662	.	T	C	51.4	.	DP=57;AF1=0.5554;CI95=0.5,1;DP4=0,1,2,4;MQ=48;PV4=1,0.17,0.3,1	PL:DP:SP:GT:GQ	81,0,7:7:0:0/1:10
    830. 

  830. chr11	28057957	.	T	C	99	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=6,9,4,11;MQ=48;PV4=0.7,4.9e-09,5.5e-05,1	PL:DP:SP:GT:GQ	184,0,255:30:2:0/1:99
    831. 

  831. chr11	30255185	.	C	T	99	.	DP=48;AF1=0.5;CI95=0.5,0.5;DP4=13,11,11,9;MQ=49;PV4=1,9e-06,0.00049,1	PL:DP:SP:GT:GQ	217,0,255:44:0:0/1:99
    832. 

  832. chr11	30352473	.	CGG	CAGGG	64.7	.	INDEL;DP=9;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49	PL:DP:SP:GT:GQ	105,15,0:5:0:1/1:75
    833. 

  833. chr11	31653956	.	C	A	66.5	.	DP=31;AF1=0.8277;CI95=0.5,1;DP4=1,1,1,7;MQ=49;PV4=0.38,1,0.12,1	PL:DP:SP:GT:GQ	95,0,1:10:4:1/1:5
    834. 

  834. chr11	31903485	.	T	C	4.77	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	33,3,0:1:0:1/1:41
    835. 

  835. chr11	32118925	.	A	G	58.3	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    836. 

  836. chr11	32617537	.	A	T	28	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=2,7,8,0;MQ=49;PV4=0.0023,1.4e-06,0.029,1	PL:DP:SP:GT:GQ	58,0,239:17:26:0/1:61
    837. 

  837. chr11	32874926	.	G	A	66	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=5,1,15,1;MQ=49;PV4=0.48,2.4e-16,0.00054,1	PL:DP:SP:GT:GQ	96,0,172:22:3:0/1:99
    838. 

  838. chr11	32954344	.	G	A	99	.	DP=40;AF1=1;CI95=1,1;DP4=0,1,10,22;MQ=49;PV4=1,0.016,0.29,1	PL:DP:SP:GT:GQ	208,69,0:33:0:1/1:99
    839. 

  839. chr11	33360886	.	ATTTT	ATTT	99	.	INDEL;DP=38;AF1=1;CI95=1,1;DP4=1,0,25,7;MQ=50;PV4=1,0.14,1,1	PL:DP:SP:GT:GQ	202,74,0:33:0:1/1:99
    840. 

  840. chr11	33882427	.	T	C	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    841. 

  841. chr11	34113717	.	C	T	99	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=44	PL:DP:SP:GT:GQ	157,21,0:7:0:1/1:84
    842. 

  842. chr11	34152396	.	A	G	25	.	DP=34;AF1=0.5;CI95=0.5,0.5;DP4=19,1,0,10;MQ=49;PV4=3.7e-07,1.7e-10,0.00019,0.017	PL:DP:SP:GT:GQ	55,0,255:30:64:0/1:58
    843. 

  843. chr11	34152939	.	T	C	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,8,14;MQ=47	PL:DP:SP:GT:GQ	255,66,0:22:0:1/1:99
    844. 

  844. chr11	34158411	.	A	G	99	.	DP=17;AF1=1;CI95=1,1;DP4=1,0,1,12;MQ=47;PV4=0.14,1,0.3,0.21	PL:DP:SP:GT:GQ	159,24,0:14:0:1/1:96
    845. 

  845. chr11	34158431	.	T	C	63.3	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=43	PL:DP:SP:GT:GQ	96,15,0:5:0:1/1:75
    846. 

  846. chr11	34176214	.	A	G	71.1	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=45	PL:DP:SP:GT:GQ	104,21,0:7:0:1/1:84
    847. 

  847. chr11	34356694	.	G	A	8.64	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,1,1;MQ=49;PV4=1,0.34,0.048,1	PL:DP:SP:GT:GQ	38,0,50:4:0:0/1:41
    848. 

  848. chr11	34938265	.	C	T	22.6	.	DP=12;AF1=0.9998;CI95=0.5,1;DP4=0,1,0,4;MQ=48;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	52,2,0:5:0:1/1:37
    849. 

  849. chr11	35223158	.	T	C	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,18,1;MQ=47	PL:DP:SP:GT:GQ	197,57,0:19:0:1/1:99
    850. 

  850. chr11	35229673	.	T	C	99	.	DP=50;AF1=1;CI95=1,1;DP4=1,1,40,4;MQ=49;PV4=0.21,0.0045,0.29,1	PL:DP:SP:GT:GQ	143,81,0:46:7:1/1:99
    851. 

  851. chr11	35453796	.	GCCC	GCC	36.4	.	INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	76,9,0:3:0:1/1:63
    852. 

  852. chr11	35859466	.	G	A	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    853. 

  853. chr11	36057626	.	G	A	99	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=5,0,19,0;MQ=44;PV4=1,0.17,2.6e-09,1	PL:DP:SP:GT:GQ	194,0,96:24:0:0/1:99
    854. 

  854. chr11	36595600	.	A	G	99	.	DP=34;AF1=1;CI95=1,1;DP4=1,0,15,11;MQ=49;PV4=1,1,0.39,1	PL:DP:SP:GT:GQ	176,65,0:27:0:1/1:99
    855. 

  855. chr11	36669778	.	C	T	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=47	PL:DP:SP:GT:GQ	161,42,0:14:0:1/1:99
    856. 

  856. chr11	37460942	.	A	T	62.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=48	PL:DP:SP:GT:GQ	95,15,0:5:0:1/1:75
    857. 

  857. chr11	38469977	.	G	A	59.6	.	DP=12;AF1=0.5939;CI95=0.5,1;DP4=1,0,8,0;MQ=48;PV4=1,0.088,0.2,1	PL:DP:SP:GT:GQ	89,0,5:9:0:0/1:7
    858. 

  858. chr11	41794573	.	ca	cATAa	7.35	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	44,3,0:1:0:1/1:41
    859. 

  859. chr11	43348052	.	T	A	32	.	DP=23;AF1=0.5032;CI95=0.5,0.5;DP4=2,0,5,0;MQ=46;PV4=1,1,0.27,0.43	PL:DP:SP:GT:GQ	62,0,19:7:0:0/1:22
    860. 

  860. chr11	43472895	.	G	C	90.1	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=46	PL:DP:SP:GT:GQ	123,21,0:7:0:1/1:84
    861. 

  861. chr11	43876435	.	A	G	88	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=1,10,0,17;MQ=49;PV4=0.39,1.6e-07,0.022,1	PL:DP:SP:GT:GQ	118,0,234:28:0:0/1:99
    862. 

  862. chr11	43919694	.	C	T,A	29.5	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47	PL:DP:SP:GT:GQ	68,18,57,6,0,57:5:0:1/1:72
    863. 

  863. chr11	43919778	.	C	T	22	.	DP=28;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=43	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    864. 

  864. chr11	43919786	.	C	G	19	.	DP=29;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	51,9,0:3:0:1/1:63
    865. 

  865. chr11	43920979	.	G	A	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,14,4;MQ=49	PL:DP:SP:GT:GQ	193,54,0:18:0:1/1:99
    866. 

  866. chr11	44080210	.	T	C	54	.	DP=27;AF1=0.9999;CI95=0.5,1;DP4=1,0,1,6;MQ=49;PV4=0.25,0.47,0.29,1	PL:DP:SP:GT:GQ	84,3,0:8:0:1/1:41
    867. 

  867. chr11	44089161	.	G	A	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,7,2;MQ=44	PL:DP:SP:GT:GQ	210,27,0:9:0:1/1:99
    868. 

  868. chr11	44104701	.	CCTCT	CCTCTCT	99	.	INDEL;DP=44;AF1=1;CI95=1,1;DP4=0,0,29,11;MQ=50	PL:DP:SP:GT:GQ	255,117,0:40:0:1/1:99
    869. 

  869. chr11	44129500	.	C	G	29	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=3,4,0,5;MQ=48;PV4=0.2,0.0095,0.14,1	PL:DP:SP:GT:GQ	59,0,202:12:7:0/1:62
    870. 

  870. chr11	44289312	.	C	G	30	.	DP=4;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,2;MQ=45;PV4=1,0.17,0.055,1	PL:DP:SP:GT:GQ	60,0,78:4:0:0/1:63
    871. 

  871. chr11	44297054	.	T	C	81	.	DP=50;AF1=0.5;CI95=0.5,0.5;DP4=0,2,7,2;MQ=48;PV4=0.11,0.0093,0.16,1	PL:DP:SP:GT:GQ	111,0,41:11:10:0/1:44
    872. 

  872. chr11	44959213	.	C	T	83	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,5,1,6;MQ=47;PV4=1,8.3e-07,0.02,0.16	PL:DP:SP:GT:GQ	113,0,147:12:0:0/1:99
    873. 

  873. chr11	45877529	.	A	G	33.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=49	PL:DP:SP:GT:GQ	66,12,0:4:0:1/1:72
    874. 

  874. chr11	45925494	.	G	T	20	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=13,0,5,0;MQ=48;PV4=1,0.054,0.0012,1	PL:DP:SP:GT:GQ	50,0,188:18:0:0/1:53
    875. 

  875. chr11	45926445	.	T	C	99	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=3,14,8,12;MQ=49;PV4=0.17,5e-12,0.0019,1	PL:DP:SP:GT:GQ	177,0,255:37:8:0/1:99
    876. 

  876. chr11	45935384	.	A	G	99	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,5,1,7;MQ=48;PV4=0.57,2.2e-08,1.9e-06,0.12	PL:DP:SP:GT:GQ	141,0,255:16:2:0/1:99
    877. 

  877. chr11	45937267	.	C	T	99	.	DP=31;AF1=1;CI95=0.5,1;DP4=1,1,15,9;MQ=44;PV4=1,1,2.1e-05,1	PL:DP:SP:GT:GQ	255,8,0:26:0:1/1:56
    878. 

  878. chr11	45944994	.	GC	GCC	99	.	INDEL;DP=25;AF1=0.5;CI95=0.5,0.5;DP4=9,0,16,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	174,0,107:25:0:0/1:99
    879. 

  879. chr11	45959669	.	C	T	13	.	DP=22;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=49	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    880. 

  880. chr11	46001229	.	G	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,39,1;MQ=49	PL:DP:SP:GT:GQ	144,120,0:40:0:1/1:99
    881. 

  881. chr11	46105688	.	G	A	45.1	.	DP=32;AF1=1;CI95=0.5,1;DP4=1,0,11,0;MQ=49;PV4=1,0.49,1,0.44	PL:DP:SP:GT:GQ	78,18,0:12:0:1/1:90
    882. 

  882. chr11	46392825	.	C	G	89	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,11,0;MQ=48	PL:DP:SP:GT:GQ	122,33,0:11:0:1/1:99
    883. 

  883. chr11	46702920	.	T	C	14.7	.	DP=43;AF1=0.5718;CI95=0.5,1;DP4=0,1,2,1;MQ=49;PV4=1,1,0.24,0.18	PL:DP:SP:GT:GQ	44,0,6:4:0:0/1:8
    884. 

  884. chr11	46722731	.	T	C	47.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48	PL:DP:SP:GT:GQ	80,12,0:4:0:1/1:72
    885. 

  885. chr11	46897972	.	G	C	22	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=49	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    886. 

  886. chr11	46914583	.	T	C	33.5	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=48	PL:DP:SP:GT:GQ	66,12,0:4:0:1/1:72
    887. 

  887. chr11	46914598	.	A	G	99	.	DP=31;AF1=1;CI95=1,1;DP4=1,0,16,5;MQ=44;PV4=1,1,0.00011,1	PL:DP:SP:GT:GQ	255,41,0:22:0:1/1:99
    888. 

  888. chr11	47182774	.	G	T	57.4	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,1,0,8;MQ=47;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	90,13,0:9:0:1/1:65
    889. 

  889. chr11	47188314	.	T	C	18.7	.	DP=25;AF1=0.5939;CI95=0.5,1;DP4=0,1,0,5;MQ=48;PV4=1,0.042,0.35,1	PL:DP:SP:GT:GQ	48,0,5:6:0:0/1:7
    890. 

  890. chr11	47238522	.	T	C	99	.	DP=55;AF1=0.7303;CI95=0.5,1;DP4=1,1,9,6;MQ=48;PV4=1,0.073,0.11,1	PL:DP:SP:GT:GQ	141,0,2:17:0:0/1:3
    891. 

  891. chr11	47260272	.	T	C	12	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=44	PL:DP:SP:GT:GQ	43,6,0:2:0:1/1:49
    892. 

  892. chr11	47269159	.	T	C	25.2	.	DP=10;AF1=0.7303;CI95=0.5,1;DP4=1,0,3,0;MQ=48;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	54,0,2:4:0:0/1:3
    893. 

  893. chr11	47270255	.	C	T	44.3	.	DP=13;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48	PL:DP:SP:GT:GQ	77,15,0:5:0:1/1:75
    894. 

  894. chr11	47282024	.	C	T	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,11,6;MQ=46	PL:DP:SP:GT:GQ	227,51,0:17:0:1/1:99
    895. 

  895. chr11	47305669	.	T	G	16.6	.	DP=14;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50	PL:DP:SP:GT:GQ	49,12,0:4:0:1/1:72
    896. 

  896. chr11	47317042	.	T	C	54	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=6,0,11,0;MQ=48;PV4=1,0.0064,0.3,1	PL:DP:SP:GT:GQ	84,0,83:17:0:0/1:83
    897. 

  897. chr11	47331116	.	T	C	86.1	.	DP=64;AF1=1;CI95=1,1;DP4=0,1,2,11;MQ=49;PV4=1,0.33,0.24,1	PL:DP:SP:GT:GQ	119,21,0:14:0:1/1:84
    898. 

  898. chr11	47345100	.	T	C	46.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=45	PL:DP:SP:GT:GQ	79,12,0:4:0:1/1:72
    899. 

  899. chr11	47350553	.	G	C	89	.	DP=32;AF1=1;CI95=1,1;DP4=1,0,22,0;MQ=48;PV4=1,1,0.2,0.092	PL:DP:SP:GT:GQ	122,50,0:23:0:1/1:99
    900. 

  900. chr11	47432034	.	G	C	53	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,0,16;MQ=50	PL:DP:SP:GT:GQ	86,48,0:16:0:1/1:99
    901. 

  901. chr11	47603685	.	G	C	40	.	DP=46;AF1=0.5;CI95=0.5,0.5;DP4=9,5,0,9;MQ=47;PV4=0.0026,0.0035,0.1,1	PL:DP:SP:GT:GQ	70,0,255:23:26:0/1:73
    902. 

  902. chr11	47640355	.	C	T	73.1	.	DP=11;AF1=0.508;CI95=0.5,0.5;DP4=1,0,8,0;MQ=46;PV4=1,0.066,0.16,1	PL:DP:SP:GT:GQ	103,0,15:9:0:0/1:18
    903. 

  903. chr11	47640367	.	T	A	44	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=8,2,10,1;MQ=49;PV4=0.59,9e-09,0.3,1	PL:DP:SP:GT:GQ	74,0,248:21:2:0/1:77
    904. 

  904. chr11	47736314	.	C	G	72	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=49	PL:DP:SP:GT:GQ	105,30,0:10:0:1/1:99
    905. 

  905. chr11	47776047	.	G	A	67.5	.	DP=45;AF1=1;CI95=0.5,1;DP4=0,1,4,2;MQ=48;PV4=0.43,1,0.2,1	PL:DP:SP:GT:GQ	99,7,0:7:0:1/1:57
    906. 

  906. chr11	47776283	.	C	T	63.1	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	96,18,0:6:0:1/1:90
    907. 

  907. chr11	47813436	.	C	T	48	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=50	PL:DP:SP:GT:GQ	81,24,0:8:0:1/1:96
    908. 

  908. chr11	47834346	.	G	A	44	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=45	PL:DP:SP:GT:GQ	76,9,0:3:0:1/1:63
    909. 

  909. chr11	47834592	.	G	A	91	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,1,11;MQ=49	PL:DP:SP:GT:GQ	124,36,0:12:0:1/1:99
    910. 

  910. chr11	47837638	.	G	A	62.3	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46	PL:DP:SP:GT:GQ	95,15,0:5:0:1/1:75
    911. 

  911. chr11	47857253	.	T	C	99	.	DP=83;AF1=1;CI95=1,1;DP4=2,0,34,34;MQ=47;PV4=0.49,0.14,0.049,1	PL:DP:SP:GT:GQ	255,150,0:70:3:1/1:99
    912. 

  912. chr11	48181721	.	G	T,C	42.5	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=46	PL:DP:SP:GT:GQ	78,15,70,3,0,70:5:0:1/1:72
    913. 

  913. chr11	48238421	.	T	G	93.1	.	DP=49;AF1=1;CI95=1,1;DP4=0,0,5,2;MQ=48	PL:DP:SP:GT:GQ	126,21,0:7:0:1/1:84
    914. 

  914. chr11	48266582	.	A	C	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,14,0;MQ=48	PL:DP:SP:GT:GQ	135,42,0:14:0:1/1:99
    915. 

  915. chr11	48267589	.	A	G	99	.	DP=42;AF1=1;CI95=1,1;DP4=0,1,0,34;MQ=47;PV4=1,1,0.0074,1	PL:DP:SP:GT:GQ	137,85,0:35:0:1/1:99
    916. 

  916. chr11	48285842	.	A	G	14.2	.	DP=50;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,2,1;MQ=50;PV4=1,0.34,0.25,1	PL:DP:SP:GT:GQ	44,0,32:5:0:0/1:35
    917. 

  917. chr11	48328644	.	C	T	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,6,17;MQ=43	PL:DP:SP:GT:GQ	255,69,0:23:0:1/1:99
    918. 

  918. chr11	48346916	.	G	C	27	.	DP=55;AF1=0.5;CI95=0.5,0.5;DP4=15,25,3,9;MQ=48;PV4=0.51,2.3e-07,2.2e-05,1	PL:DP:SP:GT:GQ	57,0,255:52:3:0/1:60
    919. 

  919. chr11	48347140	.	T	C	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,2,6;MQ=48	PL:DP:SP:GT:GQ	140,24,0:8:0:1/1:96
    920. 

  920. chr11	48347267	.	T	C	46	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=11,2,8,0;MQ=49;PV4=0.5,3.2e-08,1.1e-08,1	PL:DP:SP:GT:GQ	76,0,255:21:3:0/1:79
    921. 

  921. chr11	48367398	.	C	A	8.64	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=47;PV4=1,0.071,0.35,1	PL:DP:SP:GT:GQ	38,0,82:6:0:0/1:41
    922. 

  922. chr11	48387490	.	G	A	56	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,5,1,5;MQ=49;PV4=1,8.1e-05,0.017,1	PL:DP:SP:GT:GQ	86,0,184:12:0:0/1:89
    923. 

  923. chr11	48928633	.	A	G	33	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=15	PL:DP:SP:GT:GQ	66,30,0:10:0:1/1:99
    924. 

  924. chr11	49194894	.	G	A	86	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=48	PL:DP:SP:GT:GQ	119,27,0:9:0:1/1:99
    925. 

  925. chr11	49195090	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=43	PL:DP:SP:GT:GQ	197,27,0:9:0:1/1:99
    926. 

  926. chr11	49227620	.	A	G	83.1	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=46	PL:DP:SP:GT:GQ	116,21,0:7:0:1/1:84
    927. 

  927. chr11	49431337	.	T	G	36.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=44	PL:DP:SP:GT:GQ	69,12,0:4:0:1/1:72
    928. 

  928. chr11	49597799	.	C	T	99	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=46	PL:DP:SP:GT:GQ	165,27,0:9:0:1/1:99
    929. 

  929. chr11	49974371	.	G	A	91.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=35	PL:DP:SP:GT:GQ	124,12,0:4:0:1/1:72
    930. 

  930. chr11	50228063	.	T	C	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,6,9;MQ=49	PL:DP:SP:GT:GQ	177,45,0:15:0:1/1:99
    931. 

  931. chr11	55198310	.	A	G	99	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,4,5;MQ=42	PL:DP:SP:GT:GQ	151,27,0:9:0:1/1:99
    932. 

  932. chr11	55245698	.	G	A	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,3,10;MQ=31	PL:DP:SP:GT:GQ	166,39,0:13:0:1/1:99
    933. 

  933. chr11	55432719	.	C	G	66	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=6,2,0,8;MQ=46;PV4=0.007,0.071,0.0016,1	PL:DP:SP:GT:GQ	96,0,154:16:22:0/1:99
    934. 

  934. chr11	55482401	.	G	T	20.1	.	DP=5;AF1=0.5013;CI95=0.5,0.5;DP4=1,0,3,0;MQ=48;PV4=1,0.047,0.13,1	PL:DP:SP:GT:GQ	50,0,23:4:0:0/1:26
    935. 

  935. chr11	55541098	.	G	A	99	.	DP=53;AF1=1;CI95=1,1;DP4=1,1,22,20;MQ=47;PV4=1,1,0.037,1	PL:DP:SP:GT:GQ	255,87,0:44:0:1/1:99
    936. 

  936. chr11	55587117	.	T	A	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,17,3;MQ=44	PL:DP:SP:GT:GQ	255,60,0:20:0:1/1:99
    937. 

  937. chr11	55587511	.	A	G	21.2	.	DP=39;AF1=0.5163;CI95=0.5,1;DP4=0,1,0,3;MQ=48;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	51,0,12:4:0:0/1:15
    938. 

  938. chr11	55606818	.	C	T	45	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=17,4,7,4;MQ=49;PV4=0.4,9.3e-08,0.0016,0.5	PL:DP:SP:GT:GQ	75,0,255:32:4:0/1:78
    939. 

  939. chr11	55681494	.	G	A	70.1	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=49	PL:DP:SP:GT:GQ	103,18,0:6:0:1/1:90
    940. 

  940. chr11	55703339	.	A	C	15.1	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,1,3,0;MQ=49;PV4=0.4,0.022,0.11,1	PL:DP:SP:GT:GQ	45,0,47:5:0:0/1:46
    941. 

  941. chr11	55782814	.	T	G	53.3	.	DP=16;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=48	PL:DP:SP:GT:GQ	86,15,0:5:0:1/1:75
    942. 

  942. chr11	55798152	.	G	A	71.6	.	DP=36;AF1=1;CI95=0.5,1;DP4=1,0,3,8;MQ=49;PV4=0.33,0.087,0.33,1	PL:DP:SP:GT:GQ	104,11,0:12:0:1/1:66
    943. 

  943. chr11	55860780	.	G	A	76.3	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=47	PL:DP:SP:GT:GQ	109,15,0:5:0:1/1:75
    944. 

  944. chr11	55873024	.	A	G	99	.	DP=15;AF1=1;CI95=0.5,1;DP4=1,0,2,4;MQ=45;PV4=0.43,1,0.031,1	PL:DP:SP:GT:GQ	152,5,0:7:0:1/1:46
    945. 

  945. chr11	55944048	.	G	C	45	.	DP=7;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,5,0;MQ=47;PV4=1,0.054,1,0.43	PL:DP:SP:GT:GQ	75,0,28:6:0:0/1:31
    946. 

  946. chr11	56000403	.	C	G	99	.	DP=27;AF1=0.5263;CI95=0.5,1;DP4=1,1,10,7;MQ=47;PV4=1,0.089,0.019,1	PL:DP:SP:GT:GQ	199,0,10:19:0:0/1:13
    947. 

  947. chr11	56086147	.	T	G	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,0,17,18;MQ=46	PL:DP:SP:GT:GQ	255,105,0:35:0:1/1:99
    948. 

  948. chr11	56113516	.	T	C	99	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,6,3;MQ=43	PL:DP:SP:GT:GQ	255,27,0:9:0:1/1:99
    949. 

  949. chr11	56128524	.	C	T	73.8	.	DP=34;AF1=1;CI95=0.5,1;DP4=1,0,3,5;MQ=49;PV4=0.44,1,0.27,1	PL:DP:SP:GT:GQ	106,10,0:9:0:1/1:60
    950. 

  950. chr11	56237577	.	T	A	30	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=4,5,0,8;MQ=49;PV4=0.082,0.0089,0.039,1	PL:DP:SP:GT:GQ	60,0,190:17:11:0/1:63
    951. 

  951. chr11	56289213	.	T	G	26	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	58,9,0:3:0:1/1:63
    952. 

  952. chr11	56468403	.	G	A	99	.	DP=44;AF1=0.5;CI95=0.5,0.5;DP4=11,13,8,10;MQ=48;PV4=1,8.8e-06,2.7e-08,1	PL:DP:SP:GT:GQ	255,0,255:42:0:0/1:99
    953. 

  953. chr11	56468637	.	C	T	99	.	DP=51;AF1=0.5;CI95=0.5,0.5;DP4=10,19,4,10;MQ=49;PV4=1,8.1e-11,5.2e-07,0.28	PL:DP:SP:GT:GQ	146,0,255:43:0:0/1:99
    954. 

  954. chr11	56507816	.	A	C	37	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=3,1,1,7;MQ=45;PV4=0.067,7.9e-06,0.15,1	PL:DP:SP:GT:GQ	67,0,126:12:12:0/1:70
    955. 

  955. chr11	56507838	.	A	G	99	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=6,2,2,8;MQ=43;PV4=0.054,0.024,0.0013,1	PL:DP:SP:GT:GQ	195,0,226:18:13:0/1:99
    956. 

  956. chr11	56507852	.	A	G	66	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=5,2,0,7;MQ=43;PV4=0.021,0.091,0.00024,0.038	PL:DP:SP:GT:GQ	96,0,201:14:17:0/1:99
    957. 

  957. chr11	56508013	.	A	G	47	.	DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,10,6,1;MQ=42;PV4=0.00057,0.35,6.3e-06,1	PL:DP:SP:GT:GQ	77,0,146:17:32:0/1:80
    958. 

  958. chr11	56508220	.	TGAGAG	TGAGAGAGAG	85.4	.	INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	125,9,0:3:0:1/1:63
    959. 

  959. chr11	56510672	.	T	C,G	20	.	DP=26;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=48	PL:DP:SP:GT:GQ	63,20,49,11,0,49:4:0:1/1:63
    960. 

  960. chr11	56756664	.	G	A	99	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,5,5;MQ=47	PL:DP:SP:GT:GQ	197,30,0:10:0:1/1:99
    961. 

  961. chr11	56950264	.	A	G	22.8	.	DP=2;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	54,6,0:2:0:1/1:49
    962. 

  962. chr11	57118385	.	C	T	66	.	DP=37;AF1=0.5;CI95=0.5,0.5;DP4=0,8,6,3;MQ=48;PV4=0.009,0.069,0.0065,1	PL:DP:SP:GT:GQ	96,0,119:17:20:0/1:99
    963. 

  963. chr11	57147016	.	A	G	99	.	DP=39;AF1=1;CI95=1,1;DP4=0,0,4,7;MQ=48	PL:DP:SP:GT:GQ	150,33,0:11:0:1/1:99
    964. 

  964. chr11	57148175	.	A	G	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,13;MQ=46	PL:DP:SP:GT:GQ	164,39,0:13:0:1/1:99
    965. 

  965. chr11	57155288	.	T	C	30.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=43	PL:DP:SP:GT:GQ	62,6,0:2:0:1/1:49
    966. 

  966. chr11	57184218	.	C	T	94.1	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=45	PL:DP:SP:GT:GQ	127,21,0:7:0:1/1:84
    967. 

  967. chr11	57243588	.	A	G	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=43	PL:DP:SP:GT:GQ	226,45,0:15:0:1/1:99
    968. 

  968. chr11	57369716	.	G	A	24.1	.	DP=11;AF1=0.9966;CI95=0.5,1;DP4=0,1,0,5;MQ=41;PV4=1,1,0.24,0.43	PL:DP:SP:GT:GQ	53,1,0:6:0:1/1:23
    969. 

  969. chr11	57413943	.	C	G	50.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=47	PL:DP:SP:GT:GQ	83,12,0:4:0:1/1:72
    970. 

  970. chr11	57798942	.	A	G	99	.	DP=49;AF1=1;CI95=1,1;DP4=1,0,22,12;MQ=48;PV4=1,1,0.18,1	PL:DP:SP:GT:GQ	255,83,0:35:0:1/1:99
    971. 

  971. chr11	57836248	.	C	A	10.4	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42	PL:DP:SP:GT:GQ	40,3,0:1:0:1/1:41
    972. 

  972. chr11	57958208	.	G	C	71	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=2,6,11,0;MQ=47;PV4=0.001,0.044,0.0085,1	PL:DP:SP:GT:GQ	101,0,141:19:30:0/1:99
    973. 

  973. chr11	57982229	.	A	G	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,6,2;MQ=48	PL:DP:SP:GT:GQ	138,24,0:8:0:1/1:96
    974. 

  974. chr11	57982620	.	A	G	99	.	DP=30;AF1=1;CI95=1,1;DP4=1,0,10,18;MQ=45;PV4=0.38,1.4e-06,0.16,0.37	PL:DP:SP:GT:GQ	243,37,0:29:0:1/1:99
    975. 

  975. chr11	57983194	.	A	G	11.4	.	DP=10;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,0,4;MQ=50;PV4=1,0.023,0.34,1	PL:DP:SP:GT:GQ	41,0,16:5:0:0/1:19
    976. 

  976. chr11	57995323	.	T	A,C	11.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48	PL:DP:SP:GT:GQ	50,16,40,7,0,40:4:0:1/1:63
    977. 

  977. chr11	58125620	.	T	C	99	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,18,2;MQ=45	PL:DP:SP:GT:GQ	241,60,0:20:0:1/1:99
    978. 

  978. chr11	58207204	.	A	G	94.2	.	DP=36;AF1=1;CI95=0.5,1;DP4=1,0,4,6;MQ=49;PV4=0.45,0.18,0.19,1	PL:DP:SP:GT:GQ	126,8,0:11:0:1/1:56
    979. 

  979. chr11	58379663	.	CGTGTGTGTGTGTGTGTGT	CGTGTGTGTGTGTGTGT	58.5	.	INDEL;DP=4;AF1=0.5;CI95=0.5,0.5;DP4=1,0,3,0;MQ=50;PV4=1,0.016,1,1	PL:DP:SP:GT:GQ	96,0,38:4:0:0/1:41
    980. 

  980. chr11	58478084	.	T	C	99	.	DP=41;AF1=1;CI95=0.5,1;DP4=1,0,3,7;MQ=47;PV4=0.36,0.38,0.065,1	PL:DP:SP:GT:GQ	142,7,0:11:0:1/1:57
    981. 

  981. chr11	58604712	.	T	C	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,19,4;MQ=46	PL:DP:SP:GT:GQ	255,69,0:23:0:1/1:99
    982. 

  982. chr11	59055059	.	T	G	34.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47	PL:DP:SP:GT:GQ	67,12,0:4:0:1/1:72
    983. 

  983. chr11	59189405	.	T	C	99	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=46	PL:DP:SP:GT:GQ	173,51,0:17:0:1/1:99
    984. 

  984. chr11	59345601	.	A	T	21	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,0,3,0;MQ=46;PV4=1,1,0.0074,1	PL:DP:SP:GT:GQ	51,0,44:6:0:0/1:46
    985. 

  985. chr11	59559591	.	T	G	46.5	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47	PL:DP:SP:GT:GQ	79,12,0:4:0:1/1:72
    986. 

  986. chr11	59626571	.	A	C	47	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=2,13,9,0;MQ=48;PV4=4.2e-05,0.00075,1.2e-05,0.37	PL:DP:SP:GT:GQ	77,0,255:24:44:0/1:80
    987. 

  987. chr11	59830103	.	A	G	99	.	DP=48;AF1=1;CI95=1,1;DP4=0,0,2,38;MQ=49	PL:DP:SP:GT:GQ	155,120,0:40:0:1/1:99
    988. 

  988. chr11	59947252	.	C	T	99	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=9,0,14,1;MQ=47;PV4=1,7.6e-06,0.00013,1	PL:DP:SP:GT:GQ	155,0,180:24:0:0/1:99
    989. 

  989. chr11	59997335	.	T	C	42.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49	PL:DP:SP:GT:GQ	75,15,0:5:0:1/1:75
    990. 

  990. chr11	60073702	.	A	T	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=47	PL:DP:SP:GT:GQ	141,36,0:12:0:1/1:99
    991. 

  991. chr11	60152563	.	T	A	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,13,4;MQ=47	PL:DP:SP:GT:GQ	194,51,0:17:0:1/1:99
    992. 

  992. chr11	60152584	.	G	A	99	.	DP=28;AF1=1;CI95=0.5,1;DP4=1,1,9,14;MQ=47;PV4=1,0.012,0.11,1	PL:DP:SP:GT:GQ	186,15,0:25:0:1/1:75
    993. 

  993. chr11	60157107	.	T	G	54.2	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,1,0,14;MQ=49;PV4=1,0.026,1,0.43	PL:DP:SP:GT:GQ	87,16,0:15:0:1/1:80
    994. 

  994. chr11	60164204	.	G	A	6.2	.	DP=13;AF1=0.4999;CI95=0.5,0.5;DP4=2,0,1,1;MQ=47;PV4=1,0.21,1,1	PL:DP:SP:GT:GQ	35,0,48:4:0:0/1:38
    995. 

  995. chr11	60165352	.	ATT	A	99	.	INDEL;DP=36;AF1=1;CI95=1,1;DP4=1,0,13,17;MQ=50;PV4=0.45,1,0.43,1	PL:DP:SP:GT:GQ	255,65,0:31:0:1/1:99
    996. 

  996. chr11	60233614	.	T	C	35	.	DP=41;AF1=0.5;CI95=0.5,0.5;DP4=8,14,12,0;MQ=48;PV4=0.00024,9.3e-05,0.014,0.49	PL:DP:SP:GT:GQ	65,0,255:34:36:0/1:68
    997. 

  997. chr11	60264755	.	G	A	95	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,19,0;MQ=49	PL:DP:SP:GT:GQ	128,57,0:19:0:1/1:99
    998. 

  998. chr11	60264947	.	C	T	99	.	DP=52;AF1=1;CI95=1,1;DP4=0,0,16,24;MQ=45	PL:DP:SP:GT:GQ	255,120,0:40:0:1/1:99
    999. 

  999. chr11	60265002	.	C	T	55	.	DP=40;AF1=0.5;CI95=0.5,0.5;DP4=8,11,13,5;MQ=50;PV4=0.099,4.1e-20,0.12,1	PL:DP:SP:GT:GQ	85,0,255:37:10:0/1:88
    1000. 

  1000. chr11	60265164	.	G	A	88.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=45	PL:DP:SP:GT:GQ	121,18,0:6:0:1/1:90
    1001. 

  1001. chr11	60268679	.	G	C	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,5,26;MQ=49	PL:DP:SP:GT:GQ	213,93,0:31:0:1/1:99
    1002. 

  1002. chr11	60268736	.	C	A	75	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	108,24,0:8:0:1/1:96
    1003. 

  1003. chr11	60285575	.	A	G	99	.	DP=27;AF1=1;CI95=0.5,1;DP4=1,1,14,6;MQ=47;PV4=1,0.33,0.15,1	PL:DP:SP:GT:GQ	185,14,0:22:0:1/1:70
    1004. 

  1004. chr11	60559805	.	A	G	83	.	DP=41;AF1=1;CI95=1,1;DP4=1,1,4,29;MQ=49;PV4=0.27,0.00046,0.31,1	PL:DP:SP:GT:GQ	116,46,0:35:6:1/1:99
    1005. 

  1005. chr11	60617646	.	T	C	85.1	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,2,4;MQ=48	PL:DP:SP:GT:GQ	118,18,0:6:0:1/1:90
    1006. 

  1006. chr11	60638470	.	A	G	95	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,0,14;MQ=48	PL:DP:SP:GT:GQ	128,42,0:14:0:1/1:99
    1007. 

  1007. chr11	60705454	.	A	G	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,2,7;MQ=46	PL:DP:SP:GT:GQ	179,27,0:9:0:1/1:99
    1008. 

  1008. chr11	60776334	.	A	G	37	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	69,9,0:3:0:1/1:63
    1009. 

  1009. chr11	60783135	.	A	G	99	.	DP=42;AF1=1;CI95=1,1;DP4=1,1,32,3;MQ=49;PV4=0.21,0.013,0.29,1	PL:DP:SP:GT:GQ	146,51,0:37:7:1/1:99
    1010. 

  1010. chr11	60892606	.	A	G	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,1,2,26;MQ=46;PV4=1,1,0.094,1	PL:DP:SP:GT:GQ	224,60,0:29:0:1/1:99
    1011. 

  1011. chr11	61123965	.	A	G	58.3	.	DP=13;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=46	PL:DP:SP:GT:GQ	91,15,0:5:0:1/1:75
    1012. 

  1012. chr11	61252175	.	T	G	26	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,4;MQ=48;PV4=0.33,0.097,0.17,1	PL:DP:SP:GT:GQ	56,0,55:6:0:0/1:55
    1013. 

  1013. chr11	61319000	.	C	G	25	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=48;PV4=1,0.2,0.19,1	PL:DP:SP:GT:GQ	55,0,48:7:0:0/1:50
    1014. 

  1014. chr11	61553669	.	C	A	12.3	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,3;MQ=49;PV4=1,0.35,0.35,0.08	PL:DP:SP:GT:GQ	42,0,50:6:0:0/1:44
    1015. 

  1015. chr11	61624414	.	T	C	47.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=48	PL:DP:SP:GT:GQ	80,12,0:4:0:1/1:72
    1016. 

  1016. chr11	61674913	.	G	C	11.3	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=4,2,3,0;MQ=49;PV4=0.5,0.1,0.0013,1	PL:DP:SP:GT:GQ	41,0,169:9:3:0/1:44
    1017. 

  1017. chr11	61725599	.	ATCCTCCTCCTCCTCC	ATCCTCCTCCTCCTCCTCCTCC	27.2	.	INDEL;DP=21;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=50	PL:DP:SP:GT:GQ	66,6,0:2:0:1/1:49
    1018. 

  1018. chr11	61906374	.	T	C	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,9,10;MQ=43	PL:DP:SP:GT:GQ	255,57,0:19:0:1/1:99
    1019. 

  1019. chr11	61916299	.	A	G	13.2	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,2,0,3;MQ=48;PV4=0.2,0.18,0.078,1	PL:DP:SP:GT:GQ	43,0,131:8:7:0/1:46
    1020. 

  1020. chr11	62098726	.	C	T	55	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,7,1,8;MQ=47;PV4=1,7.8e-08,1,1	PL:DP:SP:GT:GQ	85,0,210:17:0:0/1:88
    1021. 

  1021. chr11	62384869	.	T	C	5.54	.	DP=29;AF1=0.5128;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,1,1,1	PL:DP:SP:GT:GQ	34,0,13:3:0:0/1:16
    1022. 

  1022. chr11	62520842	.	CA	CACTCTTCACCTA	12.7	.	INDEL;DP=5;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    1023. 

  1023. chr11	62560244	.	A	C	14.2	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,5;MQ=49;PV4=1,0.028,0.24,0.14	PL:DP:SP:GT:GQ	44,0,42:8:0:0/1:43
    1024. 

  1024. chr11	62563353	.	G	A	18.8	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=48	PL:DP:SP:GT:GQ	50,6,0:2:0:1/1:49
    1025. 

  1025. chr11	62652063	.	A	G	99	.	DP=38;AF1=1;CI95=1,1;DP4=1,0,16,11;MQ=46;PV4=1,1,0.025,1	PL:DP:SP:GT:GQ	255,58,0:28:0:1/1:99
    1026. 

  1026. chr11	62747145	.	A	G	87.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,4;MQ=48	PL:DP:SP:GT:GQ	120,18,0:6:0:1/1:90
    1027. 

  1027. chr11	62814965	.	G	A	53.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=49	PL:DP:SP:GT:GQ	86,18,0:6:0:1/1:90
    1028. 

  1028. chr11	62931484	.	T	C	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,5,9;MQ=45	PL:DP:SP:GT:GQ	255,42,0:14:0:1/1:99
    1029. 

  1029. chr11	62951064	.	C	A	91	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,16,0;MQ=46	PL:DP:SP:GT:GQ	124,48,0:16:0:1/1:99
    1030. 

  1030. chr11	63064970	.	T	G	67.5	.	DP=41;AF1=0.9998;CI95=0.5,1;DP4=1,0,1,7;MQ=48;PV4=0.22,0.3,0.2,1	PL:DP:SP:GT:GQ	97,2,0:9:0:1/1:37
    1031. 

  1031. chr11	63313644	.	T	C	34.2	.	DP=20;AF1=0.5207;CI95=0.5,1;DP4=0,1,1,3;MQ=49;PV4=1,0.26,0.27,1	PL:DP:SP:GT:GQ	64,0,11:5:0:0/1:14
    1032. 

  1032. chr11	63357919	.	C	T	99	.	DP=22;AF1=1;CI95=1,1;DP4=0,0,0,18;MQ=46	PL:DP:SP:GT:GQ	154,54,0:18:0:1/1:99
    1033. 

  1033. chr11	63413962	.	aaaataaata	aaaata	85.4	.	INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	125,9,0:3:0:1/1:63
    1034. 

  1034. chr11	63487433	.	G	T	4.77	.	DP=26;AF1=0.4999;CI95=0.5,0.5;DP4=3,6,2,3;MQ=48;PV4=1,0.3,0.17,0.4	PL:DP:SP:GT:GQ	33,0,167:14:0:0/1:36
    1035. 

  1035. chr11	63666536	.	G	C	85	.	DP=50;AF1=0.5;CI95=0.5,0.5;DP4=3,19,15,0;MQ=49;PV4=8.7e-08,0.00067,6.7e-07,0.19	PL:DP:SP:GT:GQ	115,0,255:37:71:0/1:99
    1036. 

  1036. chr11	63885588	.	C	G	26	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,1,4,0;MQ=48;PV4=0.43,1,0.23,0.37	PL:DP:SP:GT:GQ	56,0,42:7:0:0/1:45
    1037. 

  1037. chr11	63990996	.	ACCC	ACC	99	.	INDEL;DP=10;AF1=1;CI95=1,1;DP4=0,0,1,7;MQ=50	PL:DP:SP:GT:GQ	153,24,0:8:0:1/1:96
    1038. 

  1038. chr11	64011441	.	T	C	99	.	DP=27;AF1=1;CI95=1,1;DP4=0,0,5,14;MQ=48	PL:DP:SP:GT:GQ	216,57,0:19:0:1/1:99
    1039. 

  1039. chr11	64022459	.	A	G	47.1	.	DP=22;AF1=0.5102;CI95=0.5,0.5;DP4=0,1,4,1;MQ=46;PV4=0.33,0.14,0.21,1	PL:DP:SP:GT:GQ	77,0,14:6:0:0/1:17
    1040. 

  1040. chr11	64064935	.	GC	GCCCC,GCTCGTAGAC	6.18	.	INDEL;DP=13;AF1=0.5718;CI95=0.5,1;DP4=1,0,2,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	78,36,36,42,0,42:3:0:0/1:8
    1041. 

  1041. chr11	64088435	.	A	G	74.1	.	DP=23;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=48	PL:DP:SP:GT:GQ	107,18,0:6:0:1/1:90
    1042. 

  1042. chr11	64116843	.	A	C	22	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,2,1;MQ=50	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    1043. 

  1043. chr11	64419487	.	C	A	47	.	DP=42;AF1=0.5;CI95=0.5,0.5;DP4=3,10,8,0;MQ=49;PV4=0.001,0.17,5.6e-09,1	PL:DP:SP:GT:GQ	77,0,206:21:30:0/1:80
    1044. 

  1044. chr11	64496587	.	T	C	46.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=48	PL:DP:SP:GT:GQ	79,15,0:5:0:1/1:75
    1045. 

  1045. chr11	64497161	.	C	T	19.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=45	PL:DP:SP:GT:GQ	51,6,0:2:0:1/1:49
    1046. 

  1046. chr11	64503496	.	A	G	22	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=48	PL:DP:SP:GT:GQ	54,9,0:3:0:1/1:63
    1047. 

  1047. chr11	64536866	.	T	C	99	.	DP=37;AF1=1;CI95=0.5,1;DP4=1,0,5,11;MQ=48;PV4=0.35,0.0025,0.13,1	PL:DP:SP:GT:GQ	157,11,0:17:0:1/1:66
    1048. 

  1048. chr11	64572557	.	A	G	99	.	DP=21;AF1=0.5939;CI95=0.5,1;DP4=1,1,4,9;MQ=47;PV4=1,1,0.088,1	PL:DP:SP:GT:GQ	185,0,5:15:0:0/1:7
    1049. 

  1049. chr11	64594490	.	A	G	34.1	.	DP=33;AF1=0.5102;CI95=0.5,0.5;DP4=1,1,6,1;MQ=50;PV4=0.42,0.22,0.31,1	PL:DP:SP:GT:GQ	64,0,14:9:4:0/1:17
    1050. 

  1050. chr11	64598944	.	A	G	65.4	.	DP=21;AF1=1;CI95=0.5,1;DP4=1,0,7,1;MQ=49;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	98,13,0:9:0:1/1:65
    1051. 

  1051. chr11	64608172	.	GCCCCCC	GCCCCC	33.5	.	INDEL;DP=25;AF1=1;CI95=1,1;DP4=0,0,0,18;MQ=50	PL:DP:SP:GT:GQ	74,54,0:18:0:1/1:99
    1052. 

  1052. chr11	64622419	.	T	G	94.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=44	PL:DP:SP:GT:GQ	127,15,0:5:0:1/1:75
    1053. 

  1053. chr11	64684570	.	T	G	33	.	DP=39;AF1=0.5;CI95=0.5,0.5;DP4=8,5,0,8;MQ=49;PV4=0.0068,0.021,0.0012,0.057	PL:DP:SP:GT:GQ	63,0,239:21:22:0/1:66
    1054. 

  1054. chr11	64888116	.	G	C	22	.	DP=18;AF1=0.5016;CI95=0.5,0.5;DP4=2,0,4,0;MQ=49;PV4=1,1,0.21,1	PL:DP:SP:GT:GQ	52,0,22:6:0:0/1:25
    1055. 

  1055. chr11	64898357	.	GCC	GCCC	99	.	INDEL;DP=10;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=50	PL:DP:SP:GT:GQ	154,24,0:8:0:1/1:96
    1056. 

  1056. chr11	65144075	.	T	C	99	.	DP=42;AF1=1;CI95=1,1;DP4=1,0,5,31;MQ=48;PV4=0.16,0.38,0.16,1	PL:DP:SP:GT:GQ	255,83,0:37:0:1/1:99
    1057. 

  1057. chr11	65178620	.	G	A	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43	PL:DP:SP:GT:GQ	151,15,0:5:0:1/1:75
    1058. 

  1058. chr11	65480768	.	A	G	44.8	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=42	PL:DP:SP:GT:GQ	76,6,0:2:0:1/1:49
    1059. 

  1059. chr11	65480791	.	A	G	64.1	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,3,3;MQ=49	PL:DP:SP:GT:GQ	97,18,0:6:0:1/1:90
    1060. 

  1060. chr11	65481166	.	T	C	62	.	DP=31;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=49	PL:DP:SP:GT:GQ	95,24,0:8:0:1/1:96
    1061. 

  1061. chr11	65494987	.	C	T	53.1	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=48	PL:DP:SP:GT:GQ	86,18,0:6:0:1/1:90
    1062. 

  1062. chr11	65628469	.	CAC	CACAAAC	12.7	.	INDEL;DP=7;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    1063. 

  1063. chr11	65636053	.	T	C	99	.	DP=21;AF1=1;CI95=1,1;DP4=1,0,14,4;MQ=45;PV4=1,1,0.011,1	PL:DP:SP:GT:GQ	255,38,0:19:0:1/1:99
    1064. 

  1064. chr11	65732651	.	G	A	32.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=49	PL:DP:SP:GT:GQ	65,15,0:5:0:1/1:75
    1065. 

  1065. chr11	65744421	.	C	T	19.6	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50	PL:DP:SP:GT:GQ	52,12,0:4:0:1/1:72
    1066. 

  1066. chr11	65767153	.	A	G	75.1	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=47	PL:DP:SP:GT:GQ	108,21,0:7:0:1/1:84
    1067. 

  1067. chr11	65771050	.	TCACTGAGCACTGAGCA	TCACTGAGCA	99	.	INDEL;DP=16;AF1=0.5;CI95=0.5,0.5;DP4=2,0,6,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	158,0,44:8:0:0/1:47
    1068. 

  1068. chr11	65771060	.	CTGAGCAG	C	45.5	.	INDEL;DP=12;AF1=0.5;CI95=0.5,0.5;DP4=4,1,4,0;MQ=49;PV4=1,1,1,1	PL:DP:SP:GT:GQ	83,0,116:9:0:0/1:86
    1069. 

  1069. chr11	65771203	.	G	GGACACCTACC	7.35	.	INDEL;DP=9;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,1;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	44,0,44:2:0:0/1:44
    1070. 

  1070. chr11	65788072	.	C	T	99	.	DP=14;AF1=1;CI95=0.5,1;DP4=1,0,5,5;MQ=45;PV4=1,1,1,1	PL:DP:SP:GT:GQ	186,10,0:11:0:1/1:60
    1071. 

  1071. chr11	65983522	.	A	G	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=46	PL:DP:SP:GT:GQ	150,45,0:15:0:1/1:99
    1072. 

  1072. chr11	66083129	.	T	C	63	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=49	PL:DP:SP:GT:GQ	96,24,0:8:0:1/1:96
    1073. 

  1073. chr11	66100152	.	T	C	31	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=47	PL:DP:SP:GT:GQ	63,9,0:3:0:1/1:63
    1074. 

  1074. chr11	66107674	.	A	G	99	.	DP=32;AF1=1;CI95=1,1;DP4=0,1,4,21;MQ=44;PV4=1,1,6.8e-05,1	PL:DP:SP:GT:GQ	255,55,0:26:0:1/1:99
    1075. 

  1075. chr11	66240882	.	T	C	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,4,11;MQ=45	PL:DP:SP:GT:GQ	255,45,0:15:0:1/1:99
    1076. 

  1076. chr11	66272142	.	A	G	99	.	DP=40;AF1=1;CI95=1,1;DP4=1,0,4,9;MQ=49;PV4=0.36,0.37,0.23,1	PL:DP:SP:GT:GQ	135,21,0:14:0:1/1:84
    1077. 

  1077. chr11	66288733	.	G	C	99	.	DP=34;AF1=1;CI95=1,1;DP4=1,0,26,1;MQ=48;PV4=1,1,0.19,1	PL:DP:SP:GT:GQ	190,69,0:28:0:1/1:99
    1078. 

  1078. chr11	66293779	.	T	C	90.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=44	PL:DP:SP:GT:GQ	123,12,0:4:0:1/1:72
    1079. 

  1079. chr11	66331458	.	A	G	47.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=50	PL:DP:SP:GT:GQ	80,15,0:5:0:1/1:75
    1080. 

  1080. chr11	66460527	.	C	T	70.1	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=48	PL:DP:SP:GT:GQ	103,18,0:6:0:1/1:90
    1081. 

  1081. chr11	66481772	.	C	A	31	.	DP=21;AF1=0.5;CI95=0.5,0.5;DP4=5,0,5,0;MQ=48;PV4=1,0.2,0.0053,1	PL:DP:SP:GT:GQ	61,0,90:10:0:0/1:64
    1082. 

  1082. chr11	66617286	.	G	A	17.1	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=1,6,3,1;MQ=49;PV4=0.088,0.023,0.054,0.46	PL:DP:SP:GT:GQ	47,0,175:11:11:0/1:50
    1083. 

  1083. chr11	66837965	.	T	C	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,9,7;MQ=49	PL:DP:SP:GT:GQ	181,48,0:16:0:1/1:99
    1084. 

  1084. chr11	67160961	.	A	G	99	.	DP=27;AF1=1;CI95=0.5,1;DP4=1,0,21,0;MQ=46;PV4=1,0.00058,0.024,0.13	PL:DP:SP:GT:GQ	152,16,0:22:0:1/1:80
    1085. 

  1085. chr11	67177279	.	G	A	13.9	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	45,6,0:2:0:1/1:49
    1086. 

  1086. chr11	67196544	.	C	G	99	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,1,4,6;MQ=45;PV4=1,1,0.016,1	PL:DP:SP:GT:GQ	201,7,0:11:0:1/1:57
    1087. 

  1087. chr11	67202044	.	G	A	99	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=46	PL:DP:SP:GT:GQ	134,18,0:6:0:1/1:90
    1088. 

  1088. chr11	67202156	.	C	T	56	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	89,24,0:8:0:1/1:96
    1089. 

  1089. chr11	67254464	.	A	C	32	.	DP=28;AF1=0.5;CI95=0.5,0.5;DP4=2,6,6,0;MQ=49;PV4=0.0097,0.005,0.0033,1	PL:DP:SP:GT:GQ	62,0,163:14:20:0/1:65
    1090. 

  1090. chr11	67352689	.	A	G	99	.	DP=47;AF1=1;CI95=1,1;DP4=0,0,6,32;MQ=45	PL:DP:SP:GT:GQ	255,114,0:38:0:1/1:99
    1091. 

  1091. chr11	67430762	.	T	C	51	.	DP=11;AF1=0.501;CI95=0.5,0.5;DP4=1,1,3,2;MQ=49;PV4=1,1,0.057,1	PL:DP:SP:GT:GQ	81,0,24:7:0:0/1:27
    1092. 

  1092. chr11	67450364	.	A	G	92	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,5,7;MQ=17	PL:DP:SP:GT:GQ	125,36,0:12:0:1/1:99
    1093. 

  1093. chr11	67554590	.	A	G	38.5	.	DP=11;AF1=0.8277;CI95=0.5,1;DP4=0,1,2,2;MQ=36;PV4=1,1,1,1	PL:DP:SP:GT:GQ	67,0,1:5:0:1/1:5
    1094. 

  1094. chr11	67559770	.	C	A	99	.	DP=18;AF1=0.5207;CI95=0.5,1;DP4=2,0,5,9;MQ=38;PV4=0.17,0.022,0.061,1	PL:DP:SP:GT:GQ	131,0,11:16:8:0/1:14
    1095. 

  1095. chr11	67564197	.	T	C	76	.	DP=10;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=24	PL:DP:SP:GT:GQ	109,27,0:9:0:1/1:99
    1096. 

  1096. chr11	67673027	.	A	G	68.3	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=42	PL:DP:SP:GT:GQ	101,15,0:5:0:1/1:75
    1097. 

  1097. chr11	67799731	.	C	G	18.1	.	DP=39;AF1=0.501;CI95=0.5,0.5;DP4=0,2,4,0;MQ=49;PV4=0.067,0.4,1,1	PL:DP:SP:GT:GQ	48,0,24:6:12:0/1:27
    1098. 

  1098. chr11	67814979	.	G	C	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,1,13;MQ=47	PL:DP:SP:GT:GQ	172,42,0:14:0:1/1:99
    1099. 

  1099. chr11	67842369	.	C	T	82	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,10;MQ=48	PL:DP:SP:GT:GQ	115,30,0:10:0:1/1:99
    1100. 

  1100. chr11	67957518	.	A	T	61.3	.	DP=60;AF1=1;CI95=0.5,1;DP4=0,0,3,2;MQ=48	PL:DP:SP:GT:GQ	94,15,0:5:0:1/1:75
    1101. 

  1101. chr11	68315798	.	C	A	55.1	.	DP=19;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=48	PL:DP:SP:GT:GQ	88,18,0:6:0:1/1:90
    1102. 

  1102. chr11	68455596	.	G	T	26	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,6;MQ=48;PV4=1,1,0.085,1	PL:DP:SP:GT:GQ	56,0,41:10:0:0/1:44
    1103. 

  1103. chr11	68530257	.	C	T	99	.	DP=30;AF1=1;CI95=1,1;DP4=0,0,3,21;MQ=47	PL:DP:SP:GT:GQ	210,72,0:24:0:1/1:99
    1104. 

  1104. chr11	68700814	.	A	T	6.98	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,1,2,0;MQ=48;PV4=0.33,0.03,0.077,0.26	PL:DP:SP:GT:GQ	36,0,41:3:0:0/1:38
    1105. 

  1105. chr11	68748003	.	T	C	99	.	DP=36;AF1=1;CI95=1,1;DP4=1,0,12,16;MQ=49;PV4=0.45,0.043,0.31,1	PL:DP:SP:GT:GQ	216,56,0:29:0:1/1:99
    1106. 

  1106. chr11	69630978	.	G	A	6.2	.	DP=3;AF1=0.5004;CI95=0.5,0.5;DP4=1,0,1,1;MQ=49;PV4=1,0,0,1	PL:DP:SP:GT:GQ	35,0,27:3:0:0/1:29
    1107. 

  1107. chr11	70201977	.	T	G	6.98	.	DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=0,9,0,4;MQ=48;PV4=1,1,7.8e-05,0.49	PL:DP:SP:GT:GQ	36,0,82:13:0:0/1:39
    1108. 

  1108. chr11	70208350	.	G	A	92	.	DP=34;AF1=1;CI95=1,1;DP4=0,0,4,4;MQ=48	PL:DP:SP:GT:GQ	125,24,0:8:0:1/1:96
    1109. 

  1109. chr11	70332694	.	T	C	5.46	.	DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=5,0,0,3;MQ=49;PV4=0.018,0.0044,0.34,1	PL:DP:SP:GT:GQ	34,0,144:8:17:0/1:37
    1110. 

  1110. chr11	70349061	.	A	G	99	.	DP=57;AF1=1;CI95=1,1;DP4=0,1,10,38;MQ=46;PV4=1,1,0.017,1	PL:DP:SP:GT:GQ	255,120,0:49:0:1/1:99
    1111. 

  1111. chr11	70731715	.	T	C	13.2	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=43	PL:DP:SP:GT:GQ	43,3,0:1:0:1/1:41
    1112. 

  1112. chr11	71152461	.	A	G	99	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,7,0,6;MQ=46;PV4=1,0.18,1.3e-05,0.4	PL:DP:SP:GT:GQ	130,0,213:14:0:0/1:99
    1113. 

  1113. chr11	71169547	.	G	C	99	.	DP=74;AF1=0.5;CI95=0.5,0.5;DP4=18,28,11,10;MQ=49;PV4=0.43,4.7e-17,7.9e-08,0.099	PL:DP:SP:GT:GQ	145,0,255:67:4:0/1:99
    1114. 

  1114. chr11	71169648	.	A	G	66	.	DP=33;AF1=0.5;CI95=0.5,0.5;DP4=4,16,2,4;MQ=49;PV4=0.6,0.0017,1.2e-10,1	PL:DP:SP:GT:GQ	96,0,255:26:2:0/1:99
    1115. 

  1115. chr11	71185357	.	G	A	26	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=7,0,5,0;MQ=49;PV4=1,0.14,0.0033,1	PL:DP:SP:GT:GQ	56,0,112:12:0:0/1:59
    1116. 

  1116. chr11	71185479	.	T	C	99	.	DP=63;AF1=0.5;CI95=0.5,0.5;DP4=12,16,13,15;MQ=49;PV4=1,2.4e-27,0.042,1	PL:DP:SP:GT:GQ	170,0,255:56:0:0/1:99
    1117. 

  1117. chr11	71668362	.	CTT	CT	71.5	.	INDEL;DP=13;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=50	PL:DP:SP:GT:GQ	112,21,0:7:0:1/1:84
    1118. 

  1118. chr11	71707465	.	T	C	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,0,0,11;MQ=48	PL:DP:SP:GT:GQ	135,33,0:11:0:1/1:99
    1119. 

  1119. chr11	71727422	.	A	C	37	.	DP=62;AF1=0.5001;CI95=0.5,0.5;DP4=1,1,1,5;MQ=49;PV4=0.46,0.041,0.22,1	PL:DP:SP:GT:GQ	67,0,34:8:3:0/1:37
    1120. 

  1120. chr11	71728908	.	AGTCAACG	AG	99	.	INDEL;DP=25;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,14;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	231,0,130:19:0:0/1:99
    1121. 

  1121. chr11	71941212	.	A	G	99	.	DP=16;AF1=1;CI95=1,1;DP4=0,0,2,13;MQ=49	PL:DP:SP:GT:GQ	148,45,0:15:0:1/1:99
    1122. 

  1122. chr11	71941381	.	A	G	91.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=44	PL:DP:SP:GT:GQ	124,15,0:5:0:1/1:75
    1123. 

  1123. chr11	72288650	.	TGGGGGG	TGGGGG	53.5	.	INDEL;DP=22;AF1=1;CI95=1,1;DP4=0,0,3,4;MQ=50	PL:DP:SP:GT:GQ	94,21,0:7:0:1/1:84
    1124. 

  1124. chr11	72288664	.	C	T	99	.	DP=17;AF1=1;CI95=0.5,1;DP4=0,1,0,13;MQ=47;PV4=1,1,0.2,1	PL:DP:SP:GT:GQ	133,18,0:14:0:1/1:90
    1125. 

  1125. chr11	72292353	.	GA	GAA	73.7	.	INDEL;DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=50	PL:DP:SP:GT:GQ	114,15,0:5:0:1/1:75
    1126. 

  1126. chr11	72293039	.	G	A	52	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=49	PL:DP:SP:GT:GQ	85,27,0:9:0:1/1:99
    1127. 

  1127. chr11	72293602	.	A	G	99	.	DP=49;AF1=1;CI95=1,1;DP4=0,1,7,27;MQ=44;PV4=1,1,0.008,1	PL:DP:SP:GT:GQ	255,88,0:35:0:1/1:99
    1128. 

  1128. chr11	72295906	.	A	G	99	.	DP=37;AF1=1;CI95=1,1;DP4=0,0,33,0;MQ=49	PL:DP:SP:GT:GQ	140,99,0:33:0:1/1:99
    1129. 

  1129. chr11	72326210	.	A	G	99	.	DP=18;AF1=1;CI95=1,1;DP4=0,1,0,15;MQ=43;PV4=1,1,0,1	PL:DP:SP:GT:GQ	212,25,0:16:0:1/1:99
    1130. 

  1130. chr11	72945341	.	C	T	79.6	.	DP=83;AF1=0.5939;CI95=0.5,1;DP4=1,1,3,8;MQ=48;PV4=1,0.27,0.24,1	PL:DP:SP:GT:GQ	109,0,5:13:0:0/1:7
    1131. 

  1131. chr11	73022114	.	G	T	22	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=9,6,0,7;MQ=49;PV4=0.017,0.0094,0.011,1	PL:DP:SP:GT:GQ	52,0,255:22:18:0/1:55
    1132. 

  1132. chr11	73075518	.	A	C	37	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=4,1,0,6;MQ=49;PV4=0.015,0.029,0.013,1	PL:DP:SP:GT:GQ	67,0,127:11:18:0/1:70
    1133. 

  1133. chr11	73101807	.	G	T	12.3	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=1,0,2,0;MQ=47;PV4=1,0.0097,0,0.17	PL:DP:SP:GT:GQ	42,0,41:3:0:0/1:41
    1134. 

  1134. chr11	73670645	.	T	C	99	.	DP=48;AF1=0.5;CI95=0.5,0.5;DP4=12,9,13,11;MQ=49;PV4=1,5.3e-23,3.9e-14,1	PL:DP:SP:GT:GQ	185,0,255:45:0:0/1:99
    1135. 

  1135. chr11	73681135	.	G	A	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=2,12,4,10;MQ=47;PV4=0.65,0.001,6.1e-11,1	PL:DP:SP:GT:GQ	215,0,255:28:2:0/1:99
    1136. 

  1136. chr11	73689104	.	G	A	26	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=1,3,4,1;MQ=50;PV4=0.21,0.028,0.051,1	PL:DP:SP:GT:GQ	56,0,107:9:7:0/1:59
    1137. 

  1137. chr11	73715542	.	G	A	39.1	.	DP=36;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=50	PL:DP:SP:GT:GQ	72,18,0:6:0:1/1:90
    1138. 

  1138. chr11	73768621	.	T	G	34	.	DP=35;AF1=0.5;CI95=0.5,0.5;DP4=3,9,0,7;MQ=49;PV4=0.26,0.059,0.00053,0.12	PL:DP:SP:GT:GQ	64,0,196:19:6:0/1:67
    1139. 

  1139. chr11	74047683	.	A	G	91	.	DP=32;AF1=1;CI95=1,1;DP4=1,0,26,0;MQ=48;PV4=1,0.12,0.25,1	PL:DP:SP:GT:GQ	124,52,0:27:0:1/1:99
    1140. 

  1140. chr11	74049569	.	A	G	99	.	DP=50;AF1=1;CI95=1,1;DP4=1,1,19,19;MQ=48;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	255,87,0:40:0:1/1:99
    1141. 

  1141. chr11	74053547	.	C	T	99	.	DP=22;AF1=1;CI95=1,1;DP4=1,0,9,9;MQ=46;PV4=1,0.46,0.012,1	PL:DP:SP:GT:GQ	242,29,0:19:0:1/1:99
    1142. 

  1142. chr11	74330980	.	A	G	68	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=49	PL:DP:SP:GT:GQ	101,30,0:10:0:1/1:99
    1143. 

  1143. chr11	74407676	.	C	T	56	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,4,0,6;MQ=47;PV4=1,0.2,0.05,0.47	PL:DP:SP:GT:GQ	86,0,88:10:0:0/1:87
    1144. 

  1144. chr11	74790272	.	A	C	16.1	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=20	PL:DP:SP:GT:GQ	48,9,0:3:0:1/1:63
    1145. 

  1145. chr11	74880737	.	G	T	50	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=5,3,10,0;MQ=48;PV4=0.069,0.012,0.092,0.084	PL:DP:SP:GT:GQ	80,0,171:18:12:0/1:83
    1146. 

  1146. chr11	74904362	.	T	C	97	.	DP=31;AF1=0.9999;CI95=0.5,1;DP4=0,2,7,3;MQ=48;PV4=0.15,1,0.089,1	PL:DP:SP:GT:GQ	127,3,0:12:8:1/1:41
    1147. 

  1147. chr11	75152243	.	C	T	70.1	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,5,1;MQ=48	PL:DP:SP:GT:GQ	103,18,0:6:0:1/1:90
    1148. 

  1148. chr11	76372052	.	A	G	24.5	.	DP=14;AF1=0.5718;CI95=0.5,1;DP4=1,0,2,2;MQ=50;PV4=1,0.26,0.34,1	PL:DP:SP:GT:GQ	54,0,6:5:0:0/1:8
    1149. 

  1149. chr11	76372564	.	T	C	99	.	DP=9;AF1=0.5939;CI95=0.5,1;DP4=0,1,0,5;MQ=44;PV4=1,1,0,1	PL:DP:SP:GT:GQ	131,0,5:6:0:0/1:7
    1150. 

  1150. chr11	76506572	.	T	A	9.53	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,1,0;MQ=43	PL:DP:SP:GT:GQ	39,3,0:1:0:1/1:41
    1151. 

  1151. chr11	76827360	.	A	G	76	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=48	PL:DP:SP:GT:GQ	109,36,0:12:0:1/1:99
    1152. 

  1152. chr11	76834712	.	A	G	65	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=7,0,8,0;MQ=48;PV4=1,4.4e-06,4.1e-05,0.39	PL:DP:SP:GT:GQ	95,0,175:15:0:0/1:98
    1153. 

  1153. chr11	76979900	.	C	G	65.1	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=47	PL:DP:SP:GT:GQ	98,18,0:6:0:1/1:90
    1154. 

  1154. chr11	77335982	.	C	A	37.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=49	PL:DP:SP:GT:GQ	70,18,0:6:0:1/1:90
    1155. 

  1155. chr11	77378388	.	T	C	99	.	DP=40;AF1=0.5;CI95=0.5,0.5;DP4=9,13,8,7;MQ=49;PV4=0.52,1.7e-15,4e-06,1	PL:DP:SP:GT:GQ	143,0,255:37:3:0/1:99
    1156. 

  1156. chr11	77378505	.	A	G	99	.	DP=46;AF1=0.5;CI95=0.5,0.5;DP4=6,16,4,13;MQ=47;PV4=1,0.46,7.8e-18,1	PL:DP:SP:GT:GQ	255,0,255:39:0:0/1:99
    1157. 

  1157. chr11	77409568	.	T	C	99	.	DP=70;AF1=0.5;CI95=0.5,0.5;DP4=17,25,15,7;MQ=49;PV4=0.064,1.9e-20,6.8e-18,1	PL:DP:SP:GT:GQ	156,0,255:64:12:0/1:99
    1158. 

  1158. chr11	77553638	.	T	C	99	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=13,5,11,0;MQ=48;PV4=0.13,3.2e-06,2e-17,0.5	PL:DP:SP:GT:GQ	163,0,255:29:9:0/1:99
    1159. 

  1159. chr11	77632462	.	G	A	33	.	DP=16;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,0.17,0.073,1	PL:DP:SP:GT:GQ	63,0,64:5:0:0/1:63
    1160. 

  1160. chr11	77775466	.	C	G	48.5	.	DP=9;AF1=0.5718;CI95=0.5,1;DP4=0,1,0,7;MQ=49;PV4=1,0.078,0.21,1	PL:DP:SP:GT:GQ	78,0,6:8:0:0/1:8
    1161. 

  1161. chr11	77811990	.	T	C	83	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,9,0;MQ=48	PL:DP:SP:GT:GQ	116,27,0:9:0:1/1:99
    1162. 

  1162. chr11	78204073	.	CACAGATAC	CAC	99	.	INDEL;DP=9;AF1=1;CI95=0.5,1;DP4=0,0,6,0;MQ=50	PL:DP:SP:GT:GQ	195,18,0:6:0:1/1:90
    1163. 

  1163. chr11	78277122	.	T	C	12	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=46	PL:DP:SP:GT:GQ	43,6,0:2:0:1/1:49
    1164. 

  1164. chr11	82644904	.	G	A	99	.	DP=38;AF1=0.5;CI95=0.5,0.5;DP4=18,2,10,7;MQ=49;PV4=0.052,3.3e-07,0.00025,1	PL:DP:SP:GT:GQ	189,0,255:37:13:0/1:99
    1165. 

  1165. chr11	85367289	.	C	T	79.3	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=45	PL:DP:SP:GT:GQ	112,15,0:5:0:1/1:75
    1166. 

  1166. chr11	85436500	.	T	C	99	.	DP=54;AF1=1;CI95=1,1;DP4=0,0,9,9;MQ=49	PL:DP:SP:GT:GQ	199,54,0:18:0:1/1:99
    1167. 

  1167. chr11	85436699	.	A	G	99	.	DP=46;AF1=1;CI95=1,1;DP4=0,1,7,10;MQ=49;PV4=1,0.31,0.38,1	PL:DP:SP:GT:GQ	166,28,0:18:0:1/1:99
    1168. 

  1168. chr11	85447611	.	T	C	99	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,12,1,6;MQ=48;PV4=1,0.0084,1.7e-07,1	PL:DP:SP:GT:GQ	139,0,255:20:0:0/1:99
    1169. 

  1169. chr11	85977117	.	G	A	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,7,3;MQ=45	PL:DP:SP:GT:GQ	216,30,0:10:0:1/1:99
    1170. 

  1170. chr11	86097064	.	A	T	19.1	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=5,0,4,0;MQ=48;PV4=1,0.2,0.16,0.066	PL:DP:SP:GT:GQ	49,0,85:9:0:0/1:52
    1171. 

  1171. chr11	86340596	.	A	C	11.3	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=42	PL:DP:SP:GT:GQ	41,3,0:1:0:1/1:41
    1172. 

  1172. chr11	86806071	.	C	G	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=43	PL:DP:SP:GT:GQ	141,15,0:5:0:1/1:75
    1173. 

  1173. chr11	86807104	.	C	A	41.2	.	DP=11;AF1=0.5263;CI95=0.5,1;DP4=0,1,1,4;MQ=48;PV4=1,0.24,0.31,1	PL:DP:SP:GT:GQ	71,0,10:6:0:0/1:13
    1174. 

  1174. chr11	87020504	.	A	C	10.4	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,0,3,0;MQ=49;PV4=1,1,0.14,1	PL:DP:SP:GT:GQ	40,0,52:7:0:0/1:43
    1175. 

  1175. chr11	88045583	.	A	G	99	.	DP=34;AF1=1;CI95=1,1;DP4=1,1,15,13;MQ=48;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	255,48,0:30:0:1/1:99
    1176. 

  1176. chr11	88330322	.	A	C	20	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=3,0,5,0;MQ=49;PV4=1,0.14,0.019,0.15	PL:DP:SP:GT:GQ	50,0,53:8:0:0/1:51
    1177. 

  1177. chr11	89073269	.	G	A	7.8	.	DP=8;AF1=0.5;CI95=0.5,0.5;DP4=1,1,2,0;MQ=48;PV4=1,0.33,0.16,1	PL:DP:SP:GT:GQ	37,0,44:4:0:0/1:39
    1178. 

  1178. chr11	90016648	.	A	C	7.8	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=0,2,3,0;MQ=48;PV4=0.1,0.01,0.25,1	PL:DP:SP:GT:GQ	37,0,71:5:10:0/1:40
    1179. 

  1179. chr11	90849279	.	C	G	99	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=47	PL:DP:SP:GT:GQ	133,18,0:6:0:1/1:90
    1180. 

  1180. chr11	93212254	.	C	T	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,12,0;MQ=44	PL:DP:SP:GT:GQ	174,36,0:12:0:1/1:99
    1181. 

  1181. chr11	93530682	.	A	T	20.1	.	DP=19;AF1=0.502;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,1,0.051,1	PL:DP:SP:GT:GQ	50,0,21:5:0:0/1:24
    1182. 

  1182. chr11	93623054	.	T	A	27.5	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=49	PL:DP:SP:GT:GQ	60,12,0:4:0:1/1:72
    1183. 

  1183. chr11	93886838	.	G	C	49	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45	PL:DP:SP:GT:GQ	81,9,0:3:0:1/1:63
    1184. 

  1184. chr11	93913458	.	T	C	62.1	.	DP=32;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=49	PL:DP:SP:GT:GQ	95,21,0:7:0:1/1:84
    1185. 

  1185. chr11	94225920	.	C	T	99	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=8,2,7,1;MQ=47;PV4=1,0.00065,6.6e-08,1	PL:DP:SP:GT:GQ	152,0,255:18:0:0/1:99
    1186. 

  1186. chr11	94326627	.	G	A	99	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,17,0;MQ=47	PL:DP:SP:GT:GQ	132,51,0:17:0:1/1:99
    1187. 

  1187. chr11	94340853	.	T	C	22	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=48;PV4=1,0.063,0.48,0.35	PL:DP:SP:GT:GQ	52,0,55:7:0:0/1:53
    1188. 

  1188. chr11	95521648	.	A	G	20	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=6,0,3,0;MQ=48;PV4=1,0.042,0.00029,1	PL:DP:SP:GT:GQ	50,0,157:9:0:0/1:53
    1189. 

  1189. chr11	95546829	.	T	G	18.5	.	DP=11;AF1=0.5554;CI95=0.5,1;DP4=0,1,0,3;MQ=48;PV4=1,1,0.19,1	PL:DP:SP:GT:GQ	48,0,7:4:0:0/1:10
    1190. 

  1190. chr11	95552672	.	T	G	4.13	.	DP=1;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=32	PL:DP:SP:GT:GQ	32,3,0:1:0:1/1:41
    1191. 

  1191. chr11	95555630	.	A	C	4.26	.	DP=9;AF1=0.5262;CI95=0.5,1;DP4=1,0,2,0;MQ=47;PV4=1,1,0.38,0.23	PL:DP:SP:GT:GQ	32,0,10:3:0:0/1:13
    1192. 

  1192. chr11	96092376	.	C	T	99	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=42	PL:DP:SP:GT:GQ	142,15,0:5:0:1/1:75
    1193. 

  1193. chr11	96123734	.	TG	TGG	99	.	INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=7,0,7,0;MQ=50;PV4=1,1,1,1	PL:DP:SP:GT:GQ	138,0,109:14:0:0/1:99
    1194. 

  1194. chr11	96125435	.	CTTT	CT	51.5	.	INDEL;DP=10;AF1=0.5;CI95=0.5,0.5;DP4=0,3,0,4;MQ=50;PV4=1,0.25,1,0.49	PL:DP:SP:GT:GQ	89,0,87:7:0:0/1:88
    1195. 

  1195. chr11	98436183	.	C	CA	53.7	.	INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=33	PL:DP:SP:GT:GQ	94,15,0:5:0:1/1:75
    1196. 

  1196. chr11	98436527	.	A	C	53.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48	PL:DP:SP:GT:GQ	86,12,0:4:0:1/1:72
    1197. 

  1197. chr11	101323856	.	TAAGAAG	TAAG	99	.	INDEL;DP=14;AF1=0.5;CI95=0.5,0.5;DP4=0,6,1,5;MQ=50;PV4=1,0.14,1,0.26	PL:DP:SP:GT:GQ	200,0,161:12:0:0/1:99
    1198. 

  1198. chr11	101344177	.	G	A	18.1	.	DP=10;AF1=0.5;CI95=0.5,0.5;DP4=4,0,5,0;MQ=50;PV4=1,1.1e-09,0.097,0.23	PL:DP:SP:GT:GQ	48,0,132:9:0:0/1:51
    1199. 

  1199. chr11	101771248	.	G	A	99	.	DP=29;AF1=1;CI95=1,1;DP4=1,0,12,12;MQ=44;PV4=1,0.0026,5.9e-07,0.033	PL:DP:SP:GT:GQ	255,25,0:25:0:1/1:99
    1200. 

  1200. chr11	101857758	.	G	A	32.5	.	DP=26;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49	PL:DP:SP:GT:GQ	65,12,0:4:0:1/1:72
    1201. 

  1201. chr11	101868319	.	C	G	45.1	.	DP=13;AF1=0.505;CI95=0.5,0.5;DP4=2,0,4,0;MQ=45;PV4=1,1,0.15,1	PL:DP:SP:GT:GQ	75,0,17:6:0:0/1:20
    1202. 

  1202. chr11	102207851	.	G	A	52	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=45	PL:DP:SP:GT:GQ	84,9,0:3:0:1/1:63
    1203. 

  1203. chr11	102573396	.	C	G	65	.	DP=12;AF1=1;CI95=1,1;DP4=0,0,10,0;MQ=49	PL:DP:SP:GT:GQ	98,30,0:10:0:1/1:99
    1204. 

  1204. chr11	102573451	.	T	C	99	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=6,0,13,0;MQ=46;PV4=1,0.00027,0.00038,0.091	PL:DP:SP:GT:GQ	154,0,141:19:0:0/1:99
    1205. 

  1205. chr11	102584607	.	T	C	43.1	.	DP=26;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=49	PL:DP:SP:GT:GQ	76,21,0:7:0:1/1:84
    1206. 

  1206. chr11	102592049	.	Ttgtgtgtgtgtgtgtgtgtgt	TTGTGtgtgtgtgtgtgtgtgtgtgt	43	.	INDEL;DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=28	PL:DP:SP:GT:GQ	83,12,0:4:0:1/1:72
    1207. 

  1207. chr11	102593248	.	T	C	31.3	.	DP=54;AF1=1;CI95=0.5,1;DP4=0,0,1,4;MQ=50	PL:DP:SP:GT:GQ	64,15,0:5:0:1/1:75
    1208. 

  1208. chr11	102647310	.	T	G	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,19,0;MQ=47	PL:DP:SP:GT:GQ	158,57,0:19:0:1/1:99
    1209. 

  1209. chr11	102709425	.	A	G	77	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=0,7,1,7;MQ=48;PV4=1,0.00038,0.00031,0.48	PL:DP:SP:GT:GQ	107,0,167:15:0:0/1:99
    1210. 

  1210. chr11	104869708	.	G	C	75	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=2,8,1,5;MQ=48;PV4=1,0.039,2.6e-08,1	PL:DP:SP:GT:GQ	105,0,249:16:0:0/1:99
    1211. 

  1211. chr11	104877927	.	T	C	99	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=5,5,4,5;MQ=48;PV4=1,0.022,3.4e-05,1	PL:DP:SP:GT:GQ	151,0,252:19:0:0/1:99
    1212. 

  1212. chr11	104972190	.	C	T	29	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=1,12,0,6;MQ=48;PV4=1,0.17,0.0035,1	PL:DP:SP:GT:GQ	59,0,172:19:0:0/1:62
    1213. 

  1213. chr11	107275143	.	A	G	99	.	DP=33;AF1=1;CI95=1,1;DP4=0,1,10,19;MQ=49;PV4=1,1,1,1	PL:DP:SP:GT:GQ	207,71,0:30:0:1/1:99
    1214. 

  1214. chr11	107578721	.	C	G	84	.	DP=24;AF1=1;CI95=1,1;DP4=0,1,0,17;MQ=49;PV4=1,0.16,0.31,1	PL:DP:SP:GT:GQ	117,24,0:18:0:1/1:96
    1215. 

  1215. chr11	107607312	.	T	C	26.3	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=50	PL:DP:SP:GT:GQ	59,15,0:5:0:1/1:75
    1216. 

  1216. chr11	107817110	.	G	C	8.44	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,2,0;MQ=37	PL:DP:SP:GT:GQ	39,6,0:2:0:1/1:49
    1217. 

  1217. chr11	108093208	.	A	T	19.1	.	DP=35;AF1=0.5;CI95=0.5,0.5;DP4=11,1,2,3;MQ=49;PV4=0.053,0.00056,0.0054,0.28	PL:DP:SP:GT:GQ	49,0,248:17:13:0/1:52
    1218. 

  1218. chr11	108183167	.	A	G	88.2	.	DP=25;AF1=1;CI95=0.5,1;DP4=1,0,8,2;MQ=49;PV4=1,1,0.28,1	PL:DP:SP:GT:GQ	121,17,0:11:0:1/1:85
    1219. 

  1219. chr11	108199995	.	A	G	13.2	.	DP=11;AF1=0.5025;CI95=0.5,0.5;DP4=0,2,0,3;MQ=45;PV4=1,1,0.047,1	PL:DP:SP:GT:GQ	43,0,20:5:0:0/1:23
    1220. 

  1220. chr11	108225483	.	C	T	34	.	DP=6;AF1=0.5;CI95=0.5,0.5;DP4=2,0,3,0;MQ=48;PV4=1,0.0094,0.11,0.47	PL:DP:SP:GT:GQ	64,0,77:5:0:0/1:67
    1221. 

  1221. chr11	108225661	.	A	G	99	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,6;MQ=46;PV4=1,0.0001,0.00011,1	PL:DP:SP:GT:GQ	139,0,151:11:0:0/1:99
    1222. 

  1222. chr11	108345515	.	G	GA	99	.	INDEL;DP=36;AF1=0.5;CI95=0.5,0.5;DP4=22,2,9,2;MQ=50;PV4=0.57,1,1,1	PL:DP:SP:GT:GQ	188,0,209:35:2:0/1:99
    1223. 

  1223. chr11	108352160	.	C	T	63.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=47	PL:DP:SP:GT:GQ	96,15,0:5:0:1/1:75
    1224. 

  1224. chr11	108380335	.	T	C	99	.	DP=48;AF1=1;CI95=1,1;DP4=1,1,2,20;MQ=48;PV4=0.24,1,0.073,1	PL:DP:SP:GT:GQ	148,31,0:24:6:1/1:99
    1225. 

  1225. chr11	108548002	.	T	A	56	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=0,9,0,9;MQ=48;PV4=1,0.062,0.00044,0.27	PL:DP:SP:GT:GQ	86,0,138:18:0:0/1:89
    1226. 

  1226. chr11	108711979	.	A	G	24.1	.	DP=7;AF1=0.505;CI95=0.5,0.5;DP4=1,0,4,0;MQ=49;PV4=1,0.041,0.25,1	PL:DP:SP:GT:GQ	54,0,17:5:0:0/1:20
    1227. 

  1227. chr11	109920383	.	C	T	24	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=47	PL:DP:SP:GT:GQ	56,9,0:3:0:1/1:63
    1228. 

  1228. chr11	110106746	.	C	T	33.1	.	DP=8;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50	PL:DP:SP:GT:GQ	66,21,0:7:0:1/1:84
    1229. 

  1229. chr11	111338478	.	T	C	13	.	DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=48	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    1230. 

  1230. chr11	111420364	.	A	G	99	.	DP=52;AF1=1;CI95=1,1;DP4=1,0,16,30;MQ=44;PV4=0.36,1,0.00041,1	PL:DP:SP:GT:GQ	255,121,0:47:0:1/1:99
    1231. 

  1231. chr11	111487106	.	C	G,A	99	.	DP=29;AF1=1;CI95=1,1;DP4=0,0,3,21;MQ=48	PL:DP:SP:GT:GQ	207,69,204,0,53,204:24:0:1/1:99
    1232. 

  1232. chr11	111916001	.	AGG	AG	99	.	INDEL;DP=13;AF1=1;CI95=1,1;DP4=0,0,0,12;MQ=50	PL:DP:SP:GT:GQ	154,36,0:12:0:1/1:99
    1233. 

  1233. chr11	111959715	.	C	T,A	49.3	.	DP=9;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=49	PL:DP:SP:GT:GQ	84,17,74,2,0,74:6:0:1/1:75
    1234. 

  1234. chr11	112041128	.	TTTTGTCCTGTT	TTT	99	.	INDEL;DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=50	PL:DP:SP:GT:GQ	153,12,0:4:0:1/1:72
    1235. 

  1235. chr11	112064431	.	T	C	99	.	DP=7;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=43	PL:DP:SP:GT:GQ	175,21,0:7:0:1/1:84
    1236. 

  1236. chr11	112065367	.	A	C	38.8	.	DP=15;AF1=0.95;CI95=0.5,1;DP4=1,0,5,0;MQ=48;PV4=1,1,0.18,1	PL:DP:SP:GT:GQ	67,0,0:6:0:1/1:10
    1237. 

  1237. chr11	112088499	.	A	C	74	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=49	PL:DP:SP:GT:GQ	107,24,0:8:0:1/1:96
    1238. 

  1238. chr11	113220914	.	C	G	6.98	.	DP=14;AF1=0.5003;CI95=0.5,0.5;DP4=0,2,0,3;MQ=49;PV4=1,0.14,1,1	PL:DP:SP:GT:GQ	36,0,28:5:0:0/1:30
    1239. 

  1239. chr11	113618968	.	G	C	64.8	.	DP=32;AF1=1;CI95=0.5,1;DP4=1,0,3,3;MQ=49;PV4=1,1,0.22,0.18	PL:DP:SP:GT:GQ	96,6,0:7:0:1/1:49
    1240. 

  1240. chr11	113670052	.	T	A	97.1	.	DP=56;AF1=1;CI95=0.5,1;DP4=1,0,7,3;MQ=48;PV4=1,1,0.3,1	PL:DP:SP:GT:GQ	130,18,0:11:0:1/1:90
    1241. 

  1241. chr11	113679119	.	C	T	99	.	DP=45;AF1=0.5;CI95=0.5,0.5;DP4=13,12,4,7;MQ=48;PV4=0.48,0.00013,9.5e-23,1	PL:DP:SP:GT:GQ	216,0,255:36:3:0/1:99
    1242. 

  1242. chr11	113683249	.	C	A	41	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,8;MQ=49;PV4=1,0.18,0.1,1	PL:DP:SP:GT:GQ	71,0,74:13:0:0/1:72
    1243. 

  1243. chr11	113857249	.	C	A	22	.	DP=30;AF1=0.5;CI95=0.5,0.5;DP4=8,4,7,0;MQ=49;PV4=0.25,0.09,0.42,0.21	PL:DP:SP:GT:GQ	52,0,177:19:6:0/1:55
    1244. 

  1244. chr11	114057792	.	T	G	58	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,9;MQ=48;PV4=1,0.14,0.056,1	PL:DP:SP:GT:GQ	88,0,76:14:0:0/1:79
    1245. 

  1245. chr11	114272574	.	T	A	26	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,6,0,6;MQ=49;PV4=0.23,0.028,0.0015,0.29	PL:DP:SP:GT:GQ	56,0,207:15:6:0/1:59
    1246. 

  1246. chr11	114273481	.	A	T	5.46	.	DP=8;AF1=0.4999;CI95=0.5,0.5;DP4=3,0,2,0;MQ=48;PV4=1,0.29,0.18,1	PL:DP:SP:GT:GQ	34,0,62:5:0:0/1:37
    1247. 

  1247. chr11	114324026	.	A	G	98.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=43	PL:DP:SP:GT:GQ	131,12,0:4:0:1/1:72
    1248. 

  1248. chr11	114324444	.	G	A	25	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,3,3,4;MQ=49;PV4=0.47,1.9e-05,0.24,0.22	PL:DP:SP:GT:GQ	55,0,91:10:3:0/1:58
    1249. 

  1249. chr11	114442103	.	A	G	99	.	DP=29;AF1=0.5;CI95=0.5,0.5;DP4=4,7,5,11;MQ=47;PV4=1,2.2e-05,6.3e-06,0.24	PL:DP:SP:GT:GQ	213,0,255:27:0:0/1:99
    1250. 

  1250. chr11	115047391	.	A	G	10.4	.	DP=24;AF1=0.5;CI95=0.5,0.5;DP4=0,8,0,5;MQ=48;PV4=1,0.00075,0.0031,1	PL:DP:SP:GT:GQ	40,0,171:13:0:0/1:43
    1251. 

  1251. chr11	115047402	.	C	G	36	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=46;PV4=1,0.2,0.012,1	PL:DP:SP:GT:GQ	66,0,49:6:0:0/1:52
    1252. 

  1252. chr11	115214884	.	A	AT	22.2	.	INDEL;DP=2;AF1=1;CI95=0.5,1;DP4=0,0,1,1;MQ=50	PL:DP:SP:GT:GQ	61,6,0:2:0:1/1:49
    1253. 

  1253. chr11	116655747	.	G	C	11.3	.	DP=14;AF1=0.5;CI95=0.5,0.5;DP4=2,4,3,0;MQ=47;PV4=0.17,0.068,0.023,1	PL:DP:SP:GT:GQ	41,0,169:9:8:0/1:44
    1254. 

  1254. chr11	116693464	.	C	T	99	.	DP=57;AF1=1;CI95=1,1;DP4=0,0,4,10;MQ=48	PL:DP:SP:GT:GQ	177,42,0:14:0:1/1:99
    1255. 

  1255. chr11	116703640	.	G	C	62.1	.	DP=31;AF1=1;CI95=0.5,1;DP4=0,0,1,5;MQ=48	PL:DP:SP:GT:GQ	95,18,0:6:0:1/1:90
    1256. 

  1256. chr11	116707684	.	A	G	99	.	DP=19;AF1=1;CI95=1,1;DP4=0,0,15,0;MQ=44	PL:DP:SP:GT:GQ	218,45,0:15:0:1/1:99
    1257. 

  1257. chr11	116824884	.	T	G	58	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=0,5,0,5;MQ=48;PV4=1,7.4e-05,0.02,1	PL:DP:SP:GT:GQ	88,0,154:10:0:0/1:91
    1258. 

  1258. chr11	116950176	.	G	T	4.11	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	34,9,0:3:0:1/1:63
    1259. 

  1259. chr11	117109270	.	G	T	27	.	DP=15;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=44	PL:DP:SP:GT:GQ	59,9,0:3:0:1/1:63
    1260. 

  1260. chr11	117109614	.	T	G	9.52	.	DP=27;AF1=0.5;CI95=0.5,0.5;DP4=1,17,6,0;MQ=49;PV4=5.2e-05,0.00011,0.00057,0.27	PL:DP:SP:GT:GQ	39,0,254:24:43:0/1:42
    1261. 

  1261. chr11	117152673	.	A	C	6.98	.	DP=23;AF1=0.4999;CI95=0.5,0.5;DP4=2,2,3,0;MQ=49;PV4=0.43,0.075,0.015,1	PL:DP:SP:GT:GQ	36,0,107:7:4:0/1:39
    1262. 

  1262. chr11	117160347	.	A	G	99	.	DP=40;AF1=1;CI95=1,1;DP4=0,1,20,12;MQ=48;PV4=0.39,1,1,1	PL:DP:SP:GT:GQ	255,76,0:33:0:1/1:99
    1263. 

  1263. chr11	117163765	.	C	A	99	.	DP=49;AF1=1;CI95=1,1;DP4=1,0,22,15;MQ=49;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	220,98,0:38:0:1/1:99
    1264. 

  1264. chr11	117163824	.	C	G	99	.	DP=43;AF1=0.5;CI95=0.5,0.5;DP4=6,15,7,8;MQ=48;PV4=0.31,7.1e-05,2.4e-14,0.34	PL:DP:SP:GT:GQ	230,0,255:36:5:0/1:99
    1265. 

  1265. chr11	117265871	.	GCT	G	22.5	.	INDEL;DP=7;AF1=0.5;CI95=0.5,0.5;DP4=2,0,0,2;MQ=50;PV4=0.33,1,1,0.0014	PL:DP:SP:GT:GQ	60,0,43:4:5:0/1:46
    1266. 

  1266. chr11	117282800	.	G	T	69.1	.	DP=37;AF1=1;CI95=0.5,1;DP4=0,0,4,2;MQ=49	PL:DP:SP:GT:GQ	102,18,0:6:0:1/1:90
    1267. 

  1267. chr11	117332352	.	A	G	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=47	PL:DP:SP:GT:GQ	135,27,0:9:0:1/1:99
    1268. 

  1268. chr11	117335722	.	T	C	99	.	DP=45;AF1=1;CI95=1,1;DP4=0,0,7,4;MQ=49	PL:DP:SP:GT:GQ	132,33,0:11:0:1/1:99
    1269. 

  1269. chr11	117342462	.	T	C	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=47	PL:DP:SP:GT:GQ	135,24,0:8:0:1/1:96
    1270. 

  1270. chr11	117375596	.	G	A	99	.	DP=18;AF1=0.5;CI95=0.5,0.5;DP4=8,0,7,2;MQ=46;PV4=0.47,1,2.2e-19,1	PL:DP:SP:GT:GQ	213,0,171:17:3:0/1:99
    1271. 

  1271. chr11	117391966	.	G	A	51	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=1,4,0,5;MQ=49;PV4=1,0.0024,0.053,1	PL:DP:SP:GT:GQ	81,0,169:10:0:0/1:84
    1272. 

  1272. chr11	117774291	.	A	C,T	33.5	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=49	PL:DP:SP:GT:GQ	70,16,61,4,0,61:5:0:1/1:72
    1273. 

  1273. chr11	117869670	.	A	G	26.5	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=49	PL:DP:SP:GT:GQ	59,12,0:4:0:1/1:72
    1274. 

  1274. chr11	117979744	.	C	A	99	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=43	PL:DP:SP:GT:GQ	150,15,0:5:0:1/1:75
    1275. 

  1275. chr11	117982495	.	T	G	35.1	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=50	PL:DP:SP:GT:GQ	68,21,0:7:0:1/1:84
    1276. 

  1276. chr11	117988082	.	T	C	99	.	DP=38;AF1=1;CI95=1,1;DP4=0,0,14,2;MQ=48	PL:DP:SP:GT:GQ	165,48,0:16:0:1/1:99
    1277. 

  1277. chr11	118074337	.	A	G	99	.	DP=52;AF1=1;CI95=1,1;DP4=0,1,14,25;MQ=46;PV4=1,0.13,0.41,0.15	PL:DP:SP:GT:GQ	255,83,0:40:0:1/1:99
    1278. 

  1278. chr11	118083664	.	A	G	77.1	.	DP=23;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=48	PL:DP:SP:GT:GQ	110,21,0:7:0:1/1:84
    1279. 

  1279. chr11	118107805	.	A	G	99	.	DP=52;AF1=1;CI95=1,1;DP4=0,0,7,7;MQ=49	PL:DP:SP:GT:GQ	152,42,0:14:0:1/1:99
    1280. 

  1280. chr11	118110977	.	T	C	45.5	.	DP=57;AF1=1;CI95=0.5,1;DP4=0,1,1,7;MQ=49;PV4=1,0.22,0.28,1	PL:DP:SP:GT:GQ	76,4,0:9:0:1/1:45
    1281. 

  1281. chr11	118134785	.	T	G	99	.	DP=33;AF1=1;CI95=1,1;DP4=2,0,22,1;MQ=48;PV4=1,1,0.29,1	PL:DP:SP:GT:GQ	158,34,0:25:0:1/1:99
    1282. 

  1282. chr11	118210106	.	G	C	69	.	DP=16;AF1=1;CI95=1,1;DP4=1,0,13,0;MQ=49;PV4=1,1,1,1	PL:DP:SP:GT:GQ	102,28,0:14:0:1/1:99
    1283. 

  1283. chr11	118215075	.	Aggctggctggctggctggctg	Aggctggctggctggctg	73.4	.	INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=50	PL:DP:SP:GT:GQ	113,9,0:3:0:1/1:63
    1284. 

  1284. chr11	118263398	.	G	T	41.5	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=39	PL:DP:SP:GT:GQ	74,12,0:4:0:1/1:72
    1285. 

  1285. chr11	118263413	.	A	T	25	.	DP=12;AF1=0.5;CI95=0.5,0.5;DP4=3,0,2,1;MQ=48;PV4=1,1,0.0031,0.34	PL:DP:SP:GT:GQ	55,0,46:6:0:0/1:48
    1286. 

  1286. chr11	118405343	.	G	A	99	.	DP=13;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=42	PL:DP:SP:GT:GQ	198,27,0:9:0:1/1:99
    1287. 

  1287. chr11	118498889	.	C	A	35	.	DP=37;AF1=0.5;CI95=0.5,0.5;DP4=6,3,0,8;MQ=48;PV4=0.009,0.0046,0.16,1	PL:DP:SP:GT:GQ	65,0,205:17:20:0/1:68
    1288. 

  1288. chr11	118873910	.	TGG	TGGG	86.5	.	INDEL;DP=8;AF1=1;CI95=1,1;DP4=0,0,7,1;MQ=31	PL:DP:SP:GT:GQ	127,24,0:8:0:1/1:96
    1289. 

  1289. chr11	118920453	.	T	C	47.3	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,5,0;MQ=48	PL:DP:SP:GT:GQ	80,15,0:5:0:1/1:75
    1290. 

  1290. chr11	118967758	.	T	C	99	.	DP=49;AF1=1;CI95=1,1;DP4=0,0,16,27;MQ=43	PL:DP:SP:GT:GQ	255,129,0:43:0:1/1:99
    1291. 

  1291. chr11	118970875	.	T	C	25	.	DP=6;AF1=1;CI95=0.5,1;DP4=0,0,3,0;MQ=46	PL:DP:SP:GT:GQ	57,9,0:3:0:1/1:63
    1292. 

  1292. chr11	118985151	.	T	C	68.5	.	DP=11;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=44	PL:DP:SP:GT:GQ	101,12,0:4:0:1/1:72
    1293. 

  1293. chr11	119005088	.	C	T	92.1	.	DP=50;AF1=1;CI95=1,1;DP4=0,0,1,6;MQ=46	PL:DP:SP:GT:GQ	125,21,0:7:0:1/1:84
    1294. 

  1294. chr11	119031841	.	GCCC	GCCCC	99	.	INDEL;DP=25;AF1=1;CI95=1,1;DP4=0,0,0,19;MQ=50	PL:DP:SP:GT:GQ	169,57,0:19:0:1/1:99
    1295. 

  1295. chr11	119052826	.	C	A	99	.	DP=14;AF1=1;CI95=1,1;DP4=1,0,4,8;MQ=48;PV4=0.38,1,0.17,1	PL:DP:SP:GT:GQ	164,21,0:13:0:1/1:84
    1296. 

  1296. chr11	119059404	.	G	A	36.3	.	DP=18;AF1=1;CI95=0.5,1;DP4=0,0,4,1;MQ=50	PL:DP:SP:GT:GQ	69,15,0:5:0:1/1:75
    1297. 

  1297. chr11	119063908	.	C	T	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=3,7,4,15;MQ=49;PV4=0.66,4.4e-08,0.11,1	PL:DP:SP:GT:GQ	147,0,236:29:2:0/1:99
    1298. 

  1298. chr11	119213400	.	T	A	23	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,2,4,1;MQ=49;PV4=1,0.31,0.22,1	PL:DP:SP:GT:GQ	53,0,78:11:0:0/1:56
    1299. 

  1299. chr11	119216231	.	A	G	99	.	DP=29;AF1=1;CI95=1,1;DP4=0,1,0,25;MQ=48;PV4=1,1,0.17,1	PL:DP:SP:GT:GQ	164,58,0:26:0:1/1:99
    1300. 

  1300. chr11	119229964	.	G	A	99	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=7,1,7,2;MQ=48;PV4=1,2.5e-06,0.003,1	PL:DP:SP:GT:GQ	137,0,221:17:0:0/1:99
    1301. 

  1301. chr11	119244095	.	C	T	82	.	DP=11;AF1=0.5;CI95=0.5,0.5;DP4=2,0,4,0;MQ=45;PV4=1,1,0,1	PL:DP:SP:GT:GQ	112,0,50:6:0:0/1:53
    1302. 

  1302. chr11	119291688	.	A	G	95	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,1,8;MQ=48	PL:DP:SP:GT:GQ	128,27,0:9:0:1/1:99
    1303. 

  1303. chr11	119510644	.	A	C	30.3	.	DP=31;AF1=1;CI95=0.5,1;DP4=0,0,0,5;MQ=50	PL:DP:SP:GT:GQ	63,15,0:5:0:1/1:75
    1304. 

  1304. chr11	119692663	.	T	C	99	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,5,8;MQ=45	PL:DP:SP:GT:GQ	247,39,0:13:0:1/1:99
    1305. 

  1305. chr11	119999191	.	A	G	54.1	.	DP=17;AF1=1;CI95=1,1;DP4=0,0,0,7;MQ=48	PL:DP:SP:GT:GQ	87,21,0:7:0:1/1:84
    1306. 

  1306. chr11	120175749	.	A	G,C	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,9,6;MQ=48	PL:DP:SP:GT:GQ	177,42,168,0,21,168:15:0:1/1:99
    1307. 

  1307. chr11	120823528	.	A	G	46	.	DP=24;AF1=1;CI95=1,1;DP4=0,0,20,0;MQ=50	PL:DP:SP:GT:GQ	79,60,0:20:0:1/1:99
    1308. 

  1308. chr11	120831520	.	T	C	84.8	.	DP=11;AF1=0.95;CI95=0.5,1;DP4=1,0,7,0;MQ=46;PV4=1,1,0.11,1	PL:DP:SP:GT:GQ	113,0,0:8:0:1/1:10
    1309. 

  1309. chr11	120852961	.	C	A	99	.	DP=49;AF1=1;CI95=1,1;DP4=1,0,11,32;MQ=47;PV4=0.27,0.15,0.054,1	PL:DP:SP:GT:GQ	255,101,0:44:0:1/1:99
    1310. 

  1310. chr11	120996292	.	A	G	15.1	.	DP=41;AF1=0.5;CI95=0.5,0.5;DP4=11,8,6,1;MQ=49;PV4=0.36,0.0016,0.00029,0.3	PL:DP:SP:GT:GQ	45,0,255:26:4:0/1:48
    1311. 

  1311. chr11	121028601	.	C	T	16.1	.	DP=20;AF1=0.5;CI95=0.5,0.5;DP4=1,0,0,3;MQ=48;PV4=0.25,0.004,0.16,1	PL:DP:SP:GT:GQ	46,0,38:4:0:0/1:40
    1312. 

  1312. chr11	121032978	.	G	A	49.3	.	DP=52;AF1=1;CI95=0.5,1;DP4=0,0,2,3;MQ=49	PL:DP:SP:GT:GQ	82,15,0:5:0:1/1:75
    1313. 

  1313. chr11	121403229	.	T	C	80.4	.	DP=37;AF1=0.5554;CI95=0.5,1;DP4=2,0,2,12;MQ=49;PV4=0.05,0.018,0.13,1	PL:DP:SP:GT:GQ	110,0,7:16:13:0/1:10
    1314. 

  1314. chr11	121403345	.	T	C	42.1	.	DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=50	PL:DP:SP:GT:GQ	75,18,0:6:0:1/1:90
    1315. 

  1315. chr11	121437819	.	C	G	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,1,12;MQ=48	PL:DP:SP:GT:GQ	142,39,0:13:0:1/1:99
    1316. 

  1316. chr11	121461921	.	C	T	5.46	.	DP=14;AF1=0.4999;CI95=0.5,0.5;DP4=0,4,0,3;MQ=48;PV4=1,0.15,0.12,1	PL:DP:SP:GT:GQ	34,0,64:7:0:0/1:37
    1317. 

  1317. chr11	121475798	.	T	A	99	.	DP=15;AF1=1;CI95=1,1;DP4=0,0,10,2;MQ=46	PL:DP:SP:GT:GQ	186,36,0:12:0:1/1:99
    1318. 

  1318. chr11	122650172	.	C	G	77.1	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,7,0;MQ=47	PL:DP:SP:GT:GQ	110,21,0:7:0:1/1:84
    1319. 

  1319. chr11	122665437	.	A	G	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,1,14,20;MQ=44;PV4=1,1,0.00077,1	PL:DP:SP:GT:GQ	255,82,0:35:0:1/1:99
    1320. 

  1320. chr11	122671944	.	T	G	21	.	DP=46;AF1=0.5;CI95=0.5,0.5;DP4=17,8,0,12;MQ=49;PV4=7.1e-05,4.2e-05,0.002,1	PL:DP:SP:GT:GQ	51,0,255:37:41:0/1:54
    1321. 

  1321. chr11	122742050	.	T	C	99	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=4,6,3,10;MQ=48;PV4=0.65,2e-06,7.2e-07,1	PL:DP:SP:GT:GQ	173,0,255:23:2:0/1:99
    1322. 

  1322. chr11	122775227	.	T	C	34.1	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,0,0,6;MQ=50	PL:DP:SP:GT:GQ	67,18,0:6:0:1/1:90
    1323. 

  1323. chr11	122906650	.	T	C	33	.	DP=13;AF1=0.5;CI95=0.5,0.5;DP4=3,3,3,2;MQ=37;PV4=1,0.15,0.024,0.38	PL:DP:SP:GT:GQ	63,0,149:11:0:0/1:66
    1324. 

  1324. chr11	122944324	.	C	T	22	.	DP=23;AF1=0.5;CI95=0.5,0.5;DP4=1,5,0,4;MQ=47;PV4=1,0.22,0.0017,1	PL:DP:SP:GT:GQ	52,0,120:10:0:0/1:55
    1325. 

  1325. chr11	123470174	.	C	T	99	.	DP=14;AF1=1;CI95=1,1;DP4=0,1,0,12;MQ=46;PV4=1,1,1,1	PL:DP:SP:GT:GQ	154,25,0:13:0:1/1:99
    1326. 

  1326. chr11	123753937	.	A	G	99	.	DP=56;AF1=0.5;CI95=0.5,0.5;DP4=5,14,6,22;MQ=48;PV4=0.74,2.6e-10,8.2e-11,1	PL:DP:SP:GT:GQ	226,0,255:47:1:0/1:99
    1327. 

  1327. chr11	123754844	.	T	C	12.3	.	DP=51;AF1=0.5;CI95=0.5,0.5;DP4=1,1,1,1;MQ=48;PV4=1,1,0.029,1	PL:DP:SP:GT:GQ	42,0,36:4:0:0/1:38
    1328. 

  1328. chr11	123777497	.	G	A	99	.	DP=49;AF1=0.5;CI95=0.5,0.5;DP4=3,8,10,11;MQ=46;PV4=0.45,0.26,0.0001,1	PL:DP:SP:GT:GQ	255,0,162:32:3:0/1:99
    1329. 

  1329. chr11	123886681	.	A	G	99	.	DP=12;AF1=1;CI95=0.5,1;DP4=0,1,4,7;MQ=47;PV4=1,1,0.13,1	PL:DP:SP:GT:GQ	188,9,0:12:0:1/1:63
    1330. 

  1330. chr11	123988195	.	T	G	35.1	.	DP=22;AF1=0.5064;CI95=0.5,0.5;DP4=2,0,5,0;MQ=48;PV4=1,1,0.18,1	PL:DP:SP:GT:GQ	65,0,16:7:0:0/1:19
    1331. 

  1331. chr11	124247361	.	C	T	43.5	.	DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=45	PL:DP:SP:GT:GQ	76,12,0:4:0:1/1:72
    1332. 

  1332. chr11	124253181	.	T	C	99	.	DP=15;AF1=0.5;CI95=0.5,0.5;DP4=1,1,0,8;MQ=44;PV4=0.2,0.071,0.0036,1	PL:DP:SP:GT:GQ	146,0,54:10:0:0/1:57
    1333. 

  1333. chr11	124266906	.	C	T	29	.	DP=17;AF1=0.5;CI95=0.5,0.5;DP4=8,1,7,0;MQ=42;PV4=1,0.00032,1,1	PL:DP:SP:GT:GQ	59,0,193:16:0:0/1:62
    1334. 

  1334. chr11	124545288	.	T	C	52	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=10,1,0,11;MQ=48;PV4=3.4e-05,7.5e-06,0.0082,1	PL:DP:SP:GT:GQ	82,0,221:22:45:0/1:85
    1335. 

  1335. chr11	124620859	.	C	A	39.8	.	DP=16;AF1=0.95;CI95=0.5,1;DP4=0,1,0,7;MQ=47;PV4=1,0.16,0.25,0.39	PL:DP:SP:GT:GQ	68,0,0:8:0:1/1:10
    1336. 

  1336. chr11	124626117	.	A	C	23	.	DP=19;AF1=0.5;CI95=0.5,0.5;DP4=4,2,4,0;MQ=49;PV4=0.47,0.15,3.9e-05,1	PL:DP:SP:GT:GQ	53,0,135:10:3:0/1:56
    1337. 

  1337. chr11	124789755	.	T	C	99	.	DP=47;AF1=1;CI95=1,1;DP4=1,0,10,25;MQ=44;PV4=0.31,1,6e-06,1	PL:DP:SP:GT:GQ	255,89,0:36:0:1/1:99
    1338. 

  1338. chr11	124793682	.	T	C	99	.	DP=41;AF1=1;CI95=1,1;DP4=0,2,9,19;MQ=46;PV4=1,1,0.42,1	PL:DP:SP:GT:GQ	255,43,0:30:0:1/1:99
    1339. 

  1339. chr11	124954282	.	A	G	65	.	DP=11;AF1=1;CI95=1,1;DP4=0,0,0,8;MQ=48	PL:DP:SP:GT:GQ	98,24,0:8:0:1/1:96
    1340. 

  1340. chr11	125298871	.	A	G	99	.	DP=20;AF1=1;CI95=1,1;DP4=0,0,16,1;MQ=48	PL:DP:SP:GT:GQ	164,51,0:17:0:1/1:99
    1341. 

  1341. chr11	125326026	.	C	T	71	.	DP=22;AF1=0.5;CI95=0.5,0.5;DP4=2,6,1,11;MQ=49;PV4=0.54,6e-13,0.024,1	PL:DP:SP:GT:GQ	101,0,241:20:3:0/1:99
    1342. 

  1342. chr11	125479363	.	G	A	99	.	DP=61;AF1=1;CI95=1,1;DP4=0,0,30,25;MQ=47	PL:DP:SP:GT:GQ	255,166,0:55:0:1/1:99
    1343. 

  1343. chr11	125525195	.	A	G	53.5	.	DP=24;AF1=1;CI95=0.5,1;DP4=0,0,2,2;MQ=48	PL:DP:SP:GT:GQ	86,12,0:4:0:1/1:72
    1344. 

  1344. chr11	125547660	.	C	G	99	.	DP=31;AF1=0.5;CI95=0.5,0.5;DP4=13,3,12,1;MQ=48;PV4=0.61,2.9e-07,2.7e-10,1	PL:DP:SP:GT:GQ	137,0,255:29:2:0/1:99
    1345. 

  1345. chr11	125617376	.	CTTT	CTT	30.4	.	INDEL;DP=4;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	70,9,0:3:0:1/1:63
    1346. 

  1346. chr11	125617610	.	A	G	26	.	DP=44;AF1=1;CI95=0.5,1;DP4=0,0,1,2;MQ=48	PL:DP:SP:GT:GQ	58,9,0:3:0:1/1:63
    1347. 

  1347. chr11	125618731	.	T	C	13	.	DP=7;AF1=1;CI95=0.5,1;DP4=0,0,0,2;MQ=47	PL:DP:SP:GT:GQ	44,6,0:2:0:1/1:49
    1348. 

  1348. chr11	125766044	.	C	A	99	.	DP=71;AF1=0.5;CI95=0.5,0.5;DP4=12,17,27,7;MQ=46;PV4=0.0038,1.9e-10,2.9e-38,1	PL:DP:SP:GT:GQ	255,0,255:63:24:0/1:99
    1349. 

  1349. chr11	125891269	.	C	T	99	.	DP=36;AF1=0.5;CI95=0.5,0.5;DP4=8,10,6,6;MQ=49;PV4=1,3.2e-09,0.00031,0.12	PL:DP:SP:GT:GQ	148,0,255:30:0:0/1:99
    1350. 

  1350. chr11	126081403	.	T	C	80.1	.	DP=33;AF1=1;CI95=1,1;DP4=0,0,4,3;MQ=49	PL:DP:SP:GT:GQ	113,21,0:7:0:1/1:84
    1351. 

  1351. chr11	126134928	.	C	T	56	.	DP=46;AF1=0.5;CI95=0.5,0.5;DP4=13,7,0,13;MQ=49;PV4=0.00016,0.0056,0.12,1	PL:DP:SP:GT:GQ	86,0,255:33:38:0/1:89
    1352. 

  1352. chr11	126139100	.	T	C	58.5	.	DP=10;AF1=1;CI95=0.5,1;DP4=0,0,1,3;MQ=47	PL:DP:SP:GT:GQ	91,12,0:4:0:1/1:72
    1353. 

  1353. chr11	126148432	.	T	C	54.5	.	DP=5;AF1=1;CI95=0.5,1;DP4=0,0,4,0;MQ=47	PL:DP:SP:GT:GQ	87,12,0:4:0:1/1:72
    1354. 

  1354. chr11	126176578	.	G	A	12.4	.	DP=22;AF1=0.5207;CI95=0.5,1;DP4=1,0,5,0;MQ=50;PV4=1,0.0054,0.35,1	PL:DP:SP:GT:GQ	42,0,11:6:0:0/1:14
    1355. 

  1355. chr11	127238526	.	atct	a	93	.	INDEL;DP=8;AF1=1;CI95=0.5,1;DP4=0,0,0,4;MQ=50	PL:DP:SP:GT:GQ	133,12,0:4:0:1/1:72
    1356. 

  1356. chr11	128333503	.	T	C	99	.	DP=62;AF1=0.5;CI95=0.5,0.5;DP4=22,15,12,12;MQ=49;PV4=0.6,5.1e-18,0.0006,1	PL:DP:SP:GT:GQ	154,0,255:61:2:0/1:99
    1357. 

  1357. chr11	128781339	.	T	C	99	.	DP=25;AF1=1;CI95=0.5,1;DP4=2,0,3,14;MQ=48;PV4=0.058,1,1,1	PL:DP:SP:GT:GQ	166,16,0:19:12:1/1:80
    1358. 

  1358. chr11	128781978	.	T	G	58	.	DP=29;AF1=0.5032;CI95=0.5,0.5;DP4=2,0,3,4;MQ=49;PV4=0.44,0.091,0.37,1	PL:DP:SP:GT:GQ	88,0,19:9:4:0/1:22
    1359. 

  1359. chr11	128782002	.	T	C	99	.	DP=49;AF1=1;CI95=1,1;DP4=0,0,24,5;MQ=45	PL:DP:SP:GT:GQ	255,84,0:29:0:1/1:99
    1360. 

  1360. chr11	128782012	.	C	G	53.2	.	DP=54;AF1=1;CI95=0.5,1;DP4=0,1,6,1;MQ=47;PV4=0.25,1,0.27,1	PL:DP:SP:GT:GQ	85,8,0:8:0:1/1:56
    1361. 

  1361. chr11	128786294	.	G	A	99	.	DP=25;AF1=1;CI95=1,1;DP4=0,0,21,1;MQ=44	PL:DP:SP:GT:GQ	255,66,0:22:0:1/1:99
    1362. 

  1362. chr11	128843249	.	T	C	40	.	DP=19;AF1=0.5003;CI95=0.5,0.5;DP4=0,3,0,6;MQ=49;PV4=1,1,0.034,1	PL:DP:SP:GT:GQ	70,0,29:9:0:0/1:32
    1363. 

  1363. chr11	128846547	.	C	A	5.79	.	DP=11;AF1=0.8277;CI95=0.5,1;DP4=0,1,0,3;MQ=50;PV4=1,1,0.33,1	PL:DP:SP:GT:GQ	33,0,1:4:0:1/1:5
    1364. 

  1364. chr11	129307007	.	C	A	26	.	DP=7;AF1=0.5;CI95=0.5,0.5;DP4=0,2,0,4;MQ=49;PV4=1,0.036,0.22,1	PL:DP:SP:GT:GQ	56,0,43:6:0:0/1:46
    1365. 

  1365. chr11	129754103	.	T	TG	42.4	.	INDEL;DP=3;AF1=1;CI95=0.5,1;DP4=0,0,0,3;MQ=50	PL:DP:SP:GT:GQ	82,9,0:3:0:1/1:63
    1366. 

  1366. chr11	129754644	.	A	G	99	.	DP=21;AF1=1;CI95=1,1;DP4=0,0,5,3;MQ=46	PL:DP:SP:GT:GQ	144,24,0:8:0:1/1:96
    1367. 

  1367. chr11	129772172	.	T	C	78	.	DP=28;AF1=1;CI95=1,1;DP4=0,0,22,0;MQ=48	PL:DP:SP:GT:GQ	111,66,0:22:0:1/1:99
    1368. 

  1368. chr11	129787081	.	C	G	56	.	DP=32;AF1=0.5;CI95=0.5,0.5;DP4=2,8,0,7;MQ=48;PV4=0.49,0.14,0.00017,1	PL:DP:SP:GT:GQ	86,0,196:17:3:0/1:89
    1369. 

  1369. chr11	129801043	.	C	T	11.4	.	DP=40;AF1=0.5063;CI95=0.5,0.5;DP4=0,1,2,1;MQ=49;PV4=1,0.14,0.33,1	PL:DP:SP:GT:GQ	41,0,16:4:0:0/1:19
    1370. 

  1370. chr11	130066335	.	C	T	99	.	DP=9;AF1=1;CI95=1,1;DP4=0,0,0,9;MQ=43	PL:DP:SP:GT:GQ	184,27,0:9:0:1/1:99
    1371. 

  1371. chr11	130165697	.	G	C	77.5	.	DP=32;AF1=1;CI95=0.5,1;DP4=1,0,7,2;MQ=49;PV4=1,0.35,0.23,0.4	PL:DP:SP:GT:GQ	109,7,0:10:0:1/1:57
    1372. 

  1372. chr11	130281488	.	G	A	99	.	DP=56;AF1=1;CI95=1,1;DP4=0,1,15,34;MQ=43;PV4=1,1,0.00017,1	PL:DP:SP:GT:GQ	255,125,0:50:0:1/1:99
    1373. 

  1373. chr11	130286766	.	G	A	99	.	DP=47;AF1=1;CI95=1,1;DP4=0,0,41,2;MQ=49	PL:DP:SP:GT:GQ	179,129,0:43:0:1/1:99
    1374. 

  1374. chr11	130339193	.	C	G	7.25	.	DP=9;AF1=0.543;CI95=0.5,1;DP4=0,1,0,2;MQ=48;PV4=1,1,0.46,0.42	PL:DP:SP:GT:GQ	36,0,8:3:0:0/1:11
    1375. 

  1375. chr11	130776454	.	A	G	26	.	DP=9;AF1=0.5;CI95=0.5,0.5;DP4=6,0,2,0;MQ=48;PV4=1,0.16,0,1	PL:DP:SP:GT:GQ	56,0,171:8:0:0/1:59
    1376. 

  1376. chr11	133735327	.	T	A	5.46	.	DP=7;AF1=0.4999;CI95=0.5,0.5;DP4=1,3,1,2;MQ=38;PV4=1,0.1,0.016,0.02	PL:DP:SP:GT:GQ	34,0,117:7:0:0/1:37
    1377. 

  1377. chr11	134010647	.	T	G	15.1	.	DP=15;AF1=0.5004;CI95=0.5,0.5;DP4=1,1,0,3;MQ=47;PV4=0.4,1,0.46,1	PL:DP:SP:GT:GQ	45,0,28:5:0:0/1:31
    1378. 

  1378. chr11	134014673	.	C	CCT	99	.	INDEL;DP=9;AF1=1;CI95=1,1;DP4=0,0,8,0;MQ=49	PL:DP:SP:GT:GQ	161,24,0:8:0:1/1:96
    1379. 

  1379. chr11	134018656	.	T	C	99	.	DP=37;AF1=0.5;CI95=0.5,0.5;DP4=12,8,7,8;MQ=49;PV4=0.51,1.8e-17,0.27,1	PL:DP:SP:GT:GQ	139,0,255:35:3:0/1:99
    1380. 

  1380. chr11	134031836	.	CA	CAAA	12.7	.	INDEL;DP=2;AF1=0.9999;CI95=0.5,1;DP4=0,0,0,1;MQ=50	PL:DP:SP:GT:GQ	50,3,0:1:0:1/1:41
    1381. 

  1381. chr11	134226278	.	C	T	87	.	DP=26;AF1=0.5;CI95=0.5,0.5;DP4=3,10,1,9;MQ=49;PV4=0.6,8e-05,0.0036,1	PL:DP:SP:GT:GQ	117,0,255:23:2:0/1:99
    1382. 

  1382.